Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,463,677	C→T	G166G (GGC→GGT)	hofD →	leader peptidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,463,677	0	C	T	99.1%	1142.5 / NA	325	G166G (GGC→GGT)	hofD	leader peptidase
Reads supporting (aligned to +/- strand): ref base C (1/0); major base T (145/176); minor base G (3/0); total (149/176)
Fisher's exact test for biased strand distribution p-value = 9.43e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 335 total aligned reads displayed.

GGTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGCGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGCA  >  NC_000913/3463587‑3463766

ggTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGgtgc                                                                                         <  1:1523679/93‑1 (MQ=255)

 gTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCa                                                                                        <  1:9645411/93‑1 (MQ=255)

 gTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCa                                                                                        <  1:9039219/93‑1 (MQ=255)

  tGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCAt                                                                                       >  2:6505001/1‑93 (MQ=255)

    cTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATgg                                                                                     >  2:6833584/1‑93 (MQ=255)

     tgtgGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGgt                                                                                    >  2:3926449/1‑93 (MQ=255)

     tgtgGTGTGTTTACTGGGGCGTCTGGGTAGATTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCAgggg                                                                                    >  2:8946088/1‑92 (MQ=255)

      gtggtgTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGgtg                                                                                   >  1:9926289/1‑93 (MQ=255)

      gtggtgTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGgtg                                                                                   <  1:264495/93‑1 (MQ=255)

       tggtgTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCCTGgtgc                                                                                  >  1:6672657/1‑92 (MQ=255)

        ggtgTGTTTGCTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGtgtg                                                                                 <  1:3097924/93‑1 (MQ=255)

         gtgtgtTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGtgg                                                                                <  2:6177170/93‑1 (MQ=255)

         gtgtgtTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGtgg                                                                                >  2:3635431/1‑93 (MQ=255)

          tgtgtTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGtggc                                                                               <  1:2316826/93‑1 (MQ=255)

          tgtgtTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGtggc                                                                               >  1:2920510/1‑93 (MQ=255)

          tgtgtTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGtggc                                                                               <  1:6257527/93‑1 (MQ=255)

          tgtgtTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGtggc                                                                               <  2:1010264/93‑1 (MQ=255)

          tgtgtTTACTGGGGCCGCTGGTTAGTTTGTCACAAACATGTATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGtggc                                                                               <  1:4860564/93‑1 (MQ=255)

           gtgtTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGtggct                                                                              >  1:5013345/1‑93 (MQ=255)

            tgtTTACTGTGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGtggctg                                                                             <  2:4966910/93‑1 (MQ=255)

            tgtTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGtggctg                                                                             >  2:1889345/1‑93 (MQ=255)

            tgtTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGtggctg                                                                             >  1:8515800/1‑93 (MQ=255)

              tttACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGCGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGtggctggc                                                                           >  2:3853597/1‑93 (MQ=255)

                 tcTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCaaa                                                                        <  1:8372403/92‑1 (MQ=255)

                   tGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCaaaag                                                                      >  2:2008710/1‑91 (MQ=255)

                   tGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACg                                                                      >  1:4628739/1‑93 (MQ=255)

                    ggggCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGt                                                                     <  1:8753701/93‑1 (MQ=255)

                    ggggCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGt                                                                     >  1:8025364/1‑93 (MQ=255)

                    ggggCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGt                                                                     >  1:9673983/1‑93 (MQ=255)

                     gggCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGtt                                                                    <  1:6246514/93‑1 (MQ=255)

                         gTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGGTGGCa                                                                >  1:7369055/1‑93 (MQ=255)

                          tCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGcaca                                                               >  1:5221275/1‑90 (MQ=255)

                           cTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAAt                                                              <  2:7772018/93‑1 (MQ=255)

                            tGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATg                                                             >  2:7242127/1‑93 (MQ=255)

                            tGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATg                                                             >  2:3274276/1‑93 (MQ=255)

                             ggTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGa                                                            <  1:7733597/93‑1 (MQ=255)

                             ggTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGa                                                            <  1:1369227/93‑1 (MQ=255)

                             ggTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGa                                                            <  1:4348456/93‑1 (MQ=255)

                              gTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGAt                                                           <  1:6130552/93‑1 (MQ=255)

                               ttAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATa                                                          >  1:10008695/1‑93 (MQ=255)

                               ttAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATa                                                          <  2:8189841/93‑1 (MQ=255)

                               ttAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATa                                                          <  2:6099238/93‑1 (MQ=255)

                                tAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGGTGCCAATGATAc                                                         >  1:1205356/1‑93 (MQ=255)

                                 tgTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATAct                                                        <  2:8833583/92‑1 (MQ=255)

                                  gTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATActg                                                       >  1:2199025/1‑93 (MQ=255)

                                      gTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGa                                                   <  1:586264/93‑1 (MQ=255)

                                         acaAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTg                                                >  1:6419118/1‑93 (MQ=255)

                                         acaAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTg                                                >  2:4129247/1‑93 (MQ=255)

                                          caAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGc                                               >  1:5941389/1‑93 (MQ=255)

                                           aaaGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGcc                                              >  2:4637289/1‑93 (MQ=255)

                                            aaGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCCAACGTTGCCCATGATACTGCTGATTTCCt                                             >  2:9785292/1‑93 (MQ=255)

                                            aaGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCt                                             <  1:512274/93‑1 (MQ=255)

                                            aaGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCt                                             >  2:3041603/1‑93 (MQ=255)

                                            aaGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCt                                             <  2:1800275/93‑1 (MQ=255)

                                            aaGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCt                                             <  1:792551/93‑1 (MQ=255)

                                             agagGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTc                                            <  1:1550452/93‑1 (MQ=255)

                                             agagGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTc                                            <  2:4580815/93‑1 (MQ=255)

                                               agGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGc                                          >  1:914907/1‑93 (MQ=255)

                                               agGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGc                                          <  1:300540/93‑1 (MQ=255)

                                                gggATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCt                                         >  1:8910288/1‑93 (MQ=255)

                                                gggATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCt                                         <  1:4487062/93‑1 (MQ=255)

                                                 ggATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTg                                        <  1:9440720/93‑1 (MQ=255)

                                                  gATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTgg                                       <  1:421573/93‑1 (MQ=255)

                                                  gATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTgg                                       >  1:1663506/1‑93 (MQ=255)

                                                    ttGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGGTGCCAATGATACTGCTGATTGCCTCGCTgggg                                     >  2:9025168/1‑92 (MQ=255)

                                                     tGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTg                                    <  1:2510310/93‑1 (MQ=255)

                                                      gggCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGGCCATGATACTGCTGATTGCCTCGCTGGGTgg                                   >  1:822264/1‑93 (MQ=255)

                                                      gggCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTgg                                   >  2:2441020/1‑93 (MQ=255)

                                                        gCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCa                                 >  2:7479503/1‑93 (MQ=255)

                                                        gCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCa                                 >  2:9635683/1‑93 (MQ=255)

                                                        gCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCa                                 <  1:6891871/93‑1 (MQ=255)

                                                        gCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCa                                 <  2:2564460/93‑1 (MQ=255)

                                                          tccGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCAtt                               <  1:2228855/91‑1 (MQ=255)

                                                          tACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCAtt                               >  2:1211320/1‑93 (MQ=255)

                                                           aCGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTg                              >  2:2886375/1‑93 (MQ=255)

                                                             ggTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGt                            <  2:6308993/93‑1 (MQ=255)

                                                              gTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGtt                           >  1:5640728/1‑93 (MQ=255)

                                                               tGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTa                          <  1:9335219/93‑1 (MQ=255)

                                                                gATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTAc                         >  2:5235715/1‑93 (MQ=255)

                                                                gATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATAATGCTGATTGCCTCGCTGGGTAGCATTGGTTAc                         >  1:2009128/1‑93 (MQ=255)

                                                                   ttCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGcc                      <  2:6623921/93‑1 (MQ=255)

                                                                    tCATGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCa                     <  2:4561926/93‑1 (MQ=255)

                                                                      aaGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATc                   >  2:1278100/1‑93 (MQ=255)

                                                                       aGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCg                  >  2:840885/1‑93 (MQ=255)

                                                                          tACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGttt               <  1:3787659/93‑1 (MQ=255)

                                                                           aCTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTc              <  2:5833028/93‑1 (MQ=255)

                                                                            cTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTca             >  1:3562411/1‑93 (MQ=255)

                                                                            cTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTca             <  1:7213297/93‑1 (MQ=255)

                                                                              ggCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTcaca           <  1:45141/93‑1 (MQ=255)

                                                                              ggCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTcaca           <  2:4052133/93‑1 (MQ=255)

                                                                                ccGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAAc         >  2:2318338/1‑93 (MQ=255)

                                                                                 cGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACt        <  1:5485183/93‑1 (MQ=255)

                                                                                  gCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACtt       <  2:111951/93‑1 (MQ=255)

                                                                                   cTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTc      <  2:4396226/93‑1 (MQ=255)

                                                                                    tGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCt     >  1:3445797/1‑93 (MQ=255)

                                                                                    tGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCt     <  1:4082505/93‑1 (MQ=255)

                                                                                    tGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCt     <  2:5484403/93‑1 (MQ=255)

                                                                                     gCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTg    >  2:7433536/1‑93 (MQ=255)

                                                                                      cAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGc   >  2:487592/1‑93 (MQ=255)

                                                                                       aGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGCa  >  1:8792845/1‑93 (MQ=255)

GGTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGCGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGCA  >  NC_000913/3463587‑3463766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGGGGTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGCGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGCAACG  >  NC_000913/3463584‑3463769

TGGGGTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGT                                                                                              <  SRR4302540.6284504/94‑1 (MQ=60)

 GGGGTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTG                                                                                             >  SRR4302540.6730502/1‑94 (MQ=60)

   GGTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCA                                                                                           <  SRR4302540.1540543/94‑1 (MQ=60)

    cgctTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCAT                                                                                          <  SRR4302540.4572402/90‑1 (MQ=60)

    GTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCAT                                                                                          >  SRR4302540.1425912/1‑94 (MQ=60)

    GTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCAT                                                                                          <  SRR4302540.9147714/94‑1 (MQ=60)

    GTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCAT                                                                                          <  SRR4302540.9147716/94‑1 (MQ=60)

    GTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCAT                                                                                          <  SRR4302540.8832301/94‑1 (MQ=60)

    GTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCAT                                                                                          <  SRR4302540.9759010/94‑1 (MQ=60)

     TGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAACGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATG                                                                                         >  SRR4302540.6066549/1‑94 (MQ=60)

      GCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGG                                                                                        >  SRR4302540.9107348/1‑94 (MQ=60)

      GCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGG                                                                                        <  SRR4302540.5087773/94‑1 (MQ=60)

       CTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGT                                                                                       >  SRR4302540.1245702/1‑94 (MQ=60)

       CTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGT                                                                                       <  SRR4302540.4328687/94‑1 (MQ=60)

       CTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGT                                                                                       >  SRR4302540.2518722/1‑94 (MQ=60)

        TGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTG                                                                                      >  SRR4302540.10042173/1‑94 (MQ=60)

         GTGGTGTGTTTACTTGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGT                                                                                     >  SRR4302540.6792144/1‑94 (MQ=60)

         GTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGT                                                                                     <  SRR4302540.267084/94‑1 (MQ=60)

          TGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTG                                                                                    >  SRR4302540.2297183/1‑94 (MQ=60)

          TGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTG                                                                                    >  SRR4302540.3034093/1‑94 (MQ=60)

          TGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTG                                                                                    <  SRR4302540.6430090/94‑1 (MQ=60)

          TGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTG                                                                                    <  SRR4302540.363517/94‑1 (MQ=60)

          TGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTG                                                                                    <  SRR4302540.4565547/94‑1 (MQ=60)

          TGCTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTG                                                                                    <  SRR4302540.3480647/94‑1 (MQ=60)

           GGTGTGTTTGCTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGG                                                                                   <  SRR4302540.3131874/94‑1 (MQ=60)

           GGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGG                                                                                   >  SRR4302540.3486039/1‑94 (MQ=60)

           GGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGG                                                                                   <  SRR4302540.1829828/94‑1 (MQ=60)

           GGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGG                                                                                   >  SRR4302540.4556851/1‑94 (MQ=60)

           GGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGG                                                                                   >  SRR4302540.4556855/1‑94 (MQ=60)

            GTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGC                                                                                  >  SRR4302540.2952508/1‑94 (MQ=60)

             TGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCT                                                                                 <  SRR4302540.6327156/94‑1 (MQ=60)

             TGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCT                                                                                 >  SRR4302540.2936178/1‑94 (MQ=60)

             TGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCT                                                                                 >  SRR4302540.5067625/1‑94 (MQ=60)

             TGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCT                                                                                 <  SRR4302540.2341769/94‑1 (MQ=60)

             TGTGTTTACTGGGGCCGCTGGTTAGTTTGTCACAAACATGTATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCT                                                                                 <  SRR4302540.4912684/94‑1 (MQ=60)

              GTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTG                                                                                >  SRR4302540.8614768/1‑94 (MQ=60)

              GTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTG                                                                                <  SRR4302540.6711149/94‑1 (MQ=60)

               TGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGTTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGG                                                                               <  SRR4302540.1466181/94‑1 (MQ=60)

               TGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGG                                                                               >  SRR4302540.1552043/1‑94 (MQ=60)

               TGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGG                                                                               <  SRR4302540.3870109/94‑1 (MQ=60)

                GTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTCCTGGCCGCTGCAGGTGCATGGTGTGGCTGGC                                                                              >  SRR4302540.5762283/1‑94 (MQ=60)

                GTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGC                                                                              >  SRR4302540.3066294/1‑94 (MQ=60)

                GTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGC                                                                              <  SRR4302540.132865/94‑1 (MQ=60)

                  TTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAA                                                                            <  SRR4302540.2529072/94‑1 (MQ=60)

                   TACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAA                                                                           >  SRR4302540.2885241/1‑94 (MQ=60)

                    TCTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAAC                                                                          <  SRR4302540.8469568/94‑1 (MQ=60)

                    ACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAAC                                                                          <  SRR4302540.2217801/94‑1 (MQ=60)

                    ACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAAC                                                                          <  SRR4302540.4696928/94‑1 (MQ=60)

                     CTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACG                                                                         >  SRR4302540.4678323/1‑94 (MQ=60)

                     CTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACG                                                                         >  SRR4302540.6671355/1‑94 (MQ=60)

                     CTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGAGATTTTAAGCTACTGGGCTCTACATGCGCGTGGTGTGGCTGGaacact                                                                         >  SRR4302540.9822534/1‑88 (MQ=60)

                      TGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGT                                                                        <  SRR4302540.4132524/94‑1 (MQ=60)

                      TGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGT                                                                        >  SRR4302540.9217759/1‑94 (MQ=60)

                      TGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGT                                                                        >  SRR4302540.9483420/1‑94 (MQ=60)

                      TGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGT                                                                        >  SRR4302540.9787813/1‑94 (MQ=60)

                      TGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGT                                                                        >  SRR4302540.8118695/1‑94 (MQ=60)

                       GGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTT                                                                       <  SRR4302540.8855251/94‑1 (MQ=60)

                        GGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTG                                                                      <  SRR4302540.6316027/94‑1 (MQ=60)

                        GGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTG                                                                      <  SRR4302540.6316028/94‑1 (MQ=60)

                           CGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGGTGGCA                                                                   >  SRR4302540.7451201/1‑94 (MQ=60)

                            GTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCaca                                                                  >  SRR4302540.5278197/1‑91 (MQ=60)

                            GTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAA                                                                  >  SRR4302540.9737655/1‑94 (MQ=60)

                             TCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAAT                                                                 <  SRR4302540.5948709/94‑1 (MQ=60)

                             TCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAAT                                                                 <  SRR4302540.8876880/94‑1 (MQ=60)

                              CTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCGAATG                                                                >  SRR4302540.865518/1‑94 (MQ=60)

                              CTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATG                                                                <  SRR4302540.8584996/94‑1 (MQ=60)

                              CTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACCTTGCCAATG                                                                >  SRR4302540.470083/1‑94 (MQ=60)

                               TGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGA                                                               <  SRR4302540.7765300/94‑1 (MQ=60)

                               TGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGA                                                               <  SRR4302540.5114746/94‑1 (MQ=60)

                               TGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGA                                                               >  SRR4302540.5642991/1‑94 (MQ=60)

                                GGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGAT                                                              >  SRR4302540.1754410/1‑94 (MQ=60)

                                GGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGAT                                                              <  SRR4302540.1383732/94‑1 (MQ=60)

                                GGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGAT                                                              <  SRR4302540.4395766/94‑1 (MQ=60)

                                GGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGAT                                                              <  SRR4302540.5021415/94‑1 (MQ=60)

                                GGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGAT                                                              <  SRR4302540.7823876/94‑1 (MQ=60)

                                GGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTAAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGAT                                                              <  SRR4302540.5634497/94‑1 (MQ=60)

                                 GTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATA                                                             <  SRR4302540.6198836/94‑1 (MQ=60)

                                 GTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATA                                                             >  SRR4302540.10125248/1‑94 (MQ=60)

                                  TTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATAC                                                            <  SRR4302540.6014380/94‑1 (MQ=60)

                                  TTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATAC                                                            <  SRR4302540.5507145/94‑1 (MQ=60)

                                  TTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGGTGCCAATGATAC                                                            >  SRR4302540.1217730/1‑94 (MQ=60)

                                   TAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACT                                                           <  SRR4302540.8955762/94‑1 (MQ=60)

                                    AGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTG                                                          >  SRR4302540.2222772/1‑94 (MQ=60)

                                    AGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTG                                                          >  SRR4302540.5910861/1‑94 (MQ=60)

                                     GTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGC                                                         >  SRR4302540.4343792/1‑94 (MQ=60)

                                      TTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCT                                                        <  SRR4302540.9330933/94‑1 (MQ=60)

                                      TTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCT                                                        <  SRR4302540.7442660/94‑1 (MQ=60)

                                       TTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCCATGATACTGCTG                                                       >  SRR4302540.8873645/1‑94 (MQ=60)

                                       TTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTG                                                       <  SRR4302540.3399762/94‑1 (MQ=60)

                                         GTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGAT                                                     <  SRR4302540.9953001/94‑1 (MQ=60)

                                         GTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGAT                                                     <  SRR4302540.5661628/94‑1 (MQ=60)

                                         GTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGAT                                                     <  SRR4302540.592592/94‑1 (MQ=60)

                                         GTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGAT                                                     >  SRR4302540.6358906/1‑94 (MQ=60)

                                          TCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATT                                                    <  SRR4302540.2283751/94‑1 (MQ=60)

                                          TCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATT                                                    <  SRR4302540.4469172/94‑1 (MQ=60)

                                           CACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTG                                                   >  SRR4302540.5249945/1‑94 (MQ=60)

                                           CACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTG                                                   >  SRR4302540.6490563/1‑94 (MQ=60)

                                            ACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGC                                                  >  SRR4302540.6007067/1‑94 (MQ=60)

                                             CAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCC                                                 <  SRR4302540.9948520/94‑1 (MQ=60)

                                              AAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCCATGATACTGCTGATTGCCT                                                >  SRR4302540.7637006/1‑94 (MQ=60)

                                              AAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCT                                                <  SRR4302540.622623/94‑1 (MQ=60)

                                               acaAGGGAATGGGCTACGGTAATCTCACGCTACTGGCCGCCGCAGGTGCATGGTGTGGCTGGCAAACGTAGCCAATGATACTGCTGATTGACTC                                               <  SRR4302540.2075152/91‑1 (MQ=60)

                                               AAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTC                                               <  SRR4302540.800964/94‑1 (MQ=60)

                                               AAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTC                                               <  SRR4302540.4585252/94‑1 (MQ=60)

                                               AAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTC                                               <  SRR4302540.517776/94‑1 (MQ=60)

                                               AAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTC                                               >  SRR4302540.3540125/1‑94 (MQ=60)

                                                AGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCG                                              >  SRR4302540.7876490/1‑94 (MQ=60)

                                                AGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCG                                              <  SRR4302540.1567540/94‑1 (MQ=60)

                                                 GAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGC                                             >  SRR4302540.984480/1‑94 (MQ=60)

                                                 GAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGC                                             >  SRR4302540.924577/1‑94 (MQ=60)

                                                  AGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCT                                            <  SRR4302540.303515/94‑1 (MQ=60)

                                                  AGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCT                                            >  SRR4302540.9013467/1‑94 (MQ=60)

                                                   GGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTG                                           <  SRR4302540.4535729/94‑1 (MQ=60)

                                                    GGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGG                                          <  SRR4302540.9552824/94‑1 (MQ=60)

                                                    GGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGG                                          <  SRR4302540.7304137/94‑1 (MQ=60)

                                                    GGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGG                                          >  SRR4302540.4506777/1‑94 (MQ=60)

                                                    GGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGG                                          <  SRR4302540.9552825/94‑1 (MQ=60)

                                                    GGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGG                                          >  SRR4302540.1681622/1‑94 (MQ=60)

                                                     GATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGG                                         <  SRR4302540.952139/94‑1 (MQ=60)

                                                     GATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGG                                         <  SRR4302540.426009/94‑1 (MQ=60)

                                                        TGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCCTGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTTCCTCGCCGGGGGG                                      >  SRR4302540.831004/1‑94 (MQ=60)

                                                        TGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGGCCATGATACTGCTGATTGCCTCGCTGGGTGG                                      >  SRR4302540.831005/1‑94 (MQ=60)

                                                        TGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGG                                      <  SRR4302540.2537421/94‑1 (MQ=60)

                                                          GGCTACGGTGATTTCAAGCTTCTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCA                                    <  SRR4302540.4975657/94‑1 (MQ=60)

                                                          GGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCA                                    <  SRR4302540.8508165/94‑1 (MQ=60)

                                                          GGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCA                                    <  SRR4302540.8972218/94‑1 (MQ=60)

                                                           GCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCAT                                   <  SRR4302540.6968318/94‑1 (MQ=60)

                                                           GCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCAT                                   >  SRR4302540.10108314/1‑94 (MQ=60)

                                                            CTACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGTCTCGCTGGGTGGCATT                                  >  SRR4302540.9028370/1‑94 (MQ=60)

                                                             TCCGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTG                                 <  SRR4302540.2252859/94‑1 (MQ=60)

                                                             TACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTG                                 >  SRR4302540.7080785/1‑94 (MQ=60)

                                                             TACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTG                                 <  SRR4302540.8194393/94‑1 (MQ=60)

                                                              ACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGG                                <  SRR4302540.306110/94‑1 (MQ=60)

                                                              ACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGG                                <  SRR4302540.8405902/94‑1 (MQ=60)

                                                              ACGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGG                                >  SRR4302540.2620715/1‑94 (MQ=60)

                                                               CGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGT                               <  SRR4302540.6780651/94‑1 (MQ=60)

                                                               CGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGT                               >  SRR4302540.71113/1‑94 (MQ=60)

                                                               CGGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGT                               <  SRR4302540.3394746/94‑1 (MQ=60)

                                                                GGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTT                              >  SRR4302540.5702813/1‑94 (MQ=60)

                                                                GGTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTT                              <  SRR4302540.8800089/94‑1 (MQ=60)

                                                                 GTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTA                             >  SRR4302540.9776407/1‑94 (MQ=60)

                                                                 GTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTA                             >  SRR4302540.8033453/1‑94 (MQ=60)

                                                                 GTGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTA                             >  SRR4302540.9776411/1‑94 (MQ=60)

                                                                  TGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTCC                            >  SRR4302540.160927/1‑94 (MQ=60)

                                                                  TGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTAC                            <  SRR4302540.9446505/94‑1 (MQ=60)

                                                                  TGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTAC                            >  SRR4302540.160928/1‑94 (MQ=60)

                                                                  TGATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATAATGCTGATTGCCTCGCTGGGTAGCATTGGTTAC                            >  SRR4302540.2030860/1‑94 (MQ=60)

                                                                   GATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACG                           <  SRR4302540.8076466/94‑1 (MQ=60)

                                                                    ATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGC                          >  SRR4302540.410694/1‑94 (MQ=60)

                                                                    ATTTCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGC                          >  SRR4302540.7471596/1‑94 (MQ=60)

                                                                     TTTCAAGCTACTGGCCGCTGCAGGTTCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCC                         <  SRR4302540.5512766/94‑1 (MQ=60)

                                                                       TCAAGCTACTGGCCGCTGCAGTTGCATGGTGGGGCTGGCAAACGTTGCCAATGATGCTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCAT                       <  SRR4302540.5961548/94‑1 (MQ=60)

                                                                       TCAAGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCAT                       <  SRR4302540.7269946/94‑1 (MQ=60)

                                                                          AGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGT                    >  SRR4302540.1811702/1‑94 (MQ=60)

                                                                          AGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGT                    >  SRR4302540.5160720/1‑94 (MQ=60)

                                                                          AGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGT                    >  SRR4302540.525296/1‑94 (MQ=60)

                                                                          AGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGT                    >  SRR4302540.8247487/1‑94 (MQ=60)

                                                                          AGCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGT                    >  SRR4302540.4043959/1‑94 (MQ=60)

                                                                          AGCTACTGGCCGCTGCAGGGGCATGGTGTGGCTGGGAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGT                    >  SRR4302540.419653/1‑94 (MQ=60)

                                                                           GCTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTT                   <  SRR4302540.1095269/94‑1 (MQ=60)

                                                                            CTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACTCCATCGTTT                  >  SRR4302540.6208592/1‑94 (MQ=60)

                                                                            CTACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTT                  >  SRR4302540.2602378/1‑94 (MQ=60)

                                                                             TACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTC                 <  SRR4302540.3828956/94‑1 (MQ=60)

                                                                              ACTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCA                >  SRR4302540.3601325/1‑94 (MQ=60)

                                                                               CTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCAC               >  SRR4302540.2300077/1‑94 (MQ=60)

                                                                               CTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCAC               >  SRR4302540.9262220/1‑94 (MQ=60)

                                                                               CTGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCAC               <  SRR4302540.7293709/94‑1 (MQ=60)

                                                                                TGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACA              >  SRR4302540.2244308/1‑94 (MQ=60)

                                                                                TGGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACA              >  SRR4302540.42860/1‑94 (MQ=60)

                                                                                 GGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAA             <  SRR4302540.8398714/94‑1 (MQ=60)

                                                                                 GGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAA             <  SRR4302540.45606/94‑1 (MQ=60)

                                                                                 GGCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAA             >  SRR4302540.6376063/1‑94 (MQ=60)

                                                                                  GCCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAAC            >  SRR4302540.9510301/1‑94 (MQ=60)

                                                                                   CCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACT           <  SRR4302540.6015914/94‑1 (MQ=60)

                                                                                   CCGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACT           >  SRR4302540.9157706/1‑94 (MQ=60)

                                                                                    CGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTT          <  SRR4302540.2833017/94‑1 (MQ=60)

                                                                                    CGCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTT          <  SRR4302540.5545564/94‑1 (MQ=60)

                                                                                     GCTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTC         <  SRR4302540.6322340/94‑1 (MQ=60)

                                                                                      CTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACCACTTCT        >  SRR4302540.3799579/1‑94 (MQ=60)

                                                                                      CTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCT        >  SRR4302540.3483275/1‑94 (MQ=60)

                                                                                      CTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCT        <  SRR4302540.3010666/94‑1 (MQ=60)

                                                                                      CTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCT        >  SRR4302540.1016672/1‑94 (MQ=60)

                                                                                      CTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCT        <  SRR4302540.2234050/94‑1 (MQ=60)

                                                                                      CTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCT        >  SRR4302540.1496229/1‑94 (MQ=60)

                                                                                      CTGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCT        <  SRR4302540.1559251/94‑1 (MQ=60)

                                                                                       TGCAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTG       <  SRR4302540.4126524/94‑1 (MQ=60)

                                                                                         CAGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGCA     >  SRR4302540.8894552/1‑94 (MQ=60)

                                                                                          AGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGCAA    >  SRR4302540.145325/1‑94 (MQ=60)

                                                                                          AGGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGCAA    <  SRR4302540.7980002/94‑1 (MQ=60)

                                                                                           GGTGCATGGTGTGGGTGTGAAACGTTTCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGCAAC   <  SRR4302540.1981402/94‑1 (MQ=60)

                                                                                           GGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGCAAC   <  SRR4302540.1580638/94‑1 (MQ=60)

                                                                                           GGTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTCTCACAACTTCTGCAAC   <  SRR4302540.6435730/94‑1 (MQ=60)

                                                                                            GTGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGCAACG  >  SRR4302540.10063475/1‑94 (MQ=60)

TGGGGTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGCGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGCAACG  >  NC_000913/3463584‑3463769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`