Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,490,327	T→C	P41P (CCT→CCC)	yhfC →	putative transport

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,490,327	0	T	C	99.4%	1537.4 / ‑2.5	479	P41P (CCT→CCC)	yhfC	putative transport
Reads supporting (aligned to +/- strand): ref base T (2/1); new base C (187/288); total (189/290)
Fisher's exact test for biased strand distribution p-value = 5.65e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.61e-01

Only 100 of 489 total aligned reads displayed.

GATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC  >  NC_000913/3490237‑3490416

gATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGt                                                                                         >  1:3962870/1‑93 (MQ=255)

gATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGt                                                                                         >  1:6344445/1‑93 (MQ=255)

   tAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTc                                                                                      >  2:209247/1‑93 (MQ=255)

     gCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCa                                                                                    <  2:4511769/93‑1 (MQ=255)

     gCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCa                                                                                    <  2:3471405/93‑1 (MQ=255)

       tttCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGt                                                                                  <  1:6668840/93‑1 (MQ=255)

        ttCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTa                                                                                 <  2:5155551/93‑1 (MQ=255)

        ttCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTa                                                                                 >  2:2625421/1‑93 (MQ=255)

        ttCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTa                                                                                 <  1:5679305/93‑1 (MQ=255)

         tctctcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGGTGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCTCGTAt                                                                                >  1:172698/1‑93 (MQ=255)

              ccTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTa                                                                           <  1:7674548/93‑1 (MQ=255)

               cTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTaa                                                                          <  2:7606909/93‑1 (MQ=255)

               cTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTaa                                                                          <  1:1516464/93‑1 (MQ=255)

               cTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTaa                                                                          <  2:3869077/93‑1 (MQ=255)

               cTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTaa                                                                          >  2:1068619/1‑93 (MQ=255)

                tACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAt                                                                         <  1:9136950/93‑1 (MQ=255)

                  cGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATac                                                                       >  2:5789882/1‑93 (MQ=255)

                  cGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATac                                                                       <  2:1576546/93‑1 (MQ=255)

                   gCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATacc                                                                      <  2:6817533/93‑1 (MQ=255)

                   gCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATacc                                                                      >  1:4244500/1‑93 (MQ=255)

                   gCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATacc                                                                      <  1:3770530/93‑1 (MQ=255)

                    cACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATacct                                                                     >  1:2660619/1‑93 (MQ=255)

                      ctgactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttc                                                                   >  1:9591093/1‑93 (MQ=255)

                       tgactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttca                                                                  <  2:3083547/93‑1 (MQ=255)

                       tgactgGTGCGTTGGTTATTGTCACCGGGATGGGGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttca                                                                  <  1:9732084/93‑1 (MQ=255)

                        gactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcac                                                                 >  1:3544488/1‑93 (MQ=255)

                         actgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcacc                                                                <  2:7771304/93‑1 (MQ=255)

                         actgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcacc                                                                <  2:6172796/93‑1 (MQ=255)

                         actgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcacc                                                                <  1:7313182/93‑1 (MQ=255)

                          cttgTGCGTTTGGTATTGGCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcacct                                                               <  1:5634915/90‑1 (MQ=255)

                            ggTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcaccttc                                                             <  2:4388184/93‑1 (MQ=255)

                            ggTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcaccttc                                                             <  1:7022867/93‑1 (MQ=255)

                             gTGCGTTGGTGATTGTCACCGGGATGGTGATGGGAAATAGCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTcc                                                            <  1:926245/93‑1 (MQ=255)

                               gCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTc                                                          <  2:8405791/93‑1 (MQ=255)

                                cGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCa                                                         <  1:8002053/93‑1 (MQ=255)

                                 gTTGGTTATTGTCACCGGGATGGTTATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCaa                                                        <  2:5225255/93‑1 (MQ=255)

                                 gTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCaa                                                        >  2:5890948/1‑93 (MQ=255)

                                  ttagTTATTGTCACCGGGATAGTGATGGAAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTACTACCTTCAACTTCCTCaaa                                                       <  1:8943254/90‑2 (MQ=255)

                                  ttGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAc                                                       >  2:2338949/1‑93 (MQ=255)

                                  ttGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAc                                                       <  2:9830659/93‑1 (MQ=255)

                                  ttGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAc                                                       >  1:7537790/1‑93 (MQ=255)

                                  ttGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAc                                                       <  1:2938881/93‑1 (MQ=255)

                                  gtGGTTATTGTCGCCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAc                                                       <  1:5367384/92‑1 (MQ=255)

                                   tGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACg                                                      <  2:226487/93‑1 (MQ=255)

                                       tATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCgg                                                  <  1:6242376/93‑1 (MQ=255)

                                        aTTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGc                                                 >  2:2798040/1‑93 (MQ=255)

                                        aTTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGc                                                 >  2:8158507/1‑93 (MQ=255)

                                         ttGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCa                                                <  1:7373892/93‑1 (MQ=255)

                                         ttGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCa                                                >  2:9346870/1‑93 (MQ=255)

                                          tGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAt                                               >  1:8513919/1‑93 (MQ=255)

                                            tCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAttt                                             >  1:2086237/1‑93 (MQ=255)

                                            tCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAttt                                             <  2:6551409/93‑1 (MQ=255)

                                               ccGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTaa                                          <  1:5039807/93‑1 (MQ=255)

                                                 gggATTGTTATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAAtc                                        <  1:3226822/93‑1 (MQ=255)

                                                 gggATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAAtc                                        >  2:8029323/1‑93 (MQ=255)

                                                 gggATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAAtc                                        <  2:8080122/93‑1 (MQ=255)

                                                  ggATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAAtct                                       <  1:336853/93‑1 (MQ=255)

                                                   gATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAAtctc                                      <  1:3691946/93‑1 (MQ=255)

                                                    aTGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATctct                                     <  1:5213631/93‑1 (MQ=255)

                                                     tGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTa                                    >  2:4280179/1‑93 (MQ=255)

                                                     tGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTa                                    <  1:2521730/93‑1 (MQ=255)

                                                     tGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTa                                    >  2:490492/1‑93 (MQ=255)

                                                     tGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTa                                    <  2:3400137/93‑1 (MQ=255)

                                                       gTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATc                                  >  1:6605175/1‑93 (MQ=255)

                                                        tGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCt                                 >  1:4853806/1‑93 (MQ=255)

                                                           agggAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTcc                              <  2:8801045/92‑1 (MQ=255)

                                                            gggAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCt                             <  1:4149117/93‑1 (MQ=255)

                                                             ggAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTc                            <  2:6952435/93‑1 (MQ=255)

                                                             ggAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTc                            >  1:10005473/1‑93 (MQ=255)

                                                             ggAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTc                            >  1:1862390/1‑93 (MQ=255)

                                                               aaaTATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCaa                          <  2:406548/93‑1 (MQ=255)

                                                               aaaTATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCaa                          <  1:607285/93‑1 (MQ=255)

                                                                aaTATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAAc                         <  1:4570667/93‑1 (MQ=255)

                                                                aaTATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAAc                         >  2:7380698/1‑93 (MQ=255)

                                                                 atatCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACg                        >  2:8220733/1‑93 (MQ=255)

                                                                 atatCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACg                        <  2:533624/93‑1 (MQ=255)

                                                                  tatCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGc                       >  1:9854454/1‑93 (MQ=255)

                                                                  tatCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGc                       <  1:9941704/93‑1 (MQ=255)

                                                                   atCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGcc                      <  2:9029327/93‑1 (MQ=255)

                                                                    tCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCt                     <  1:4499706/93‑1 (MQ=255)

                                                                     cGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTg                    <  2:555855/93‑1 (MQ=255)

                                                                          attattTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGa               <  2:6397461/93‑1 (MQ=255)

                                                                          attattTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGa               <  2:2015111/93‑1 (MQ=255)

                                                                          attattTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGa               >  1:510009/1‑93 (MQ=255)

                                                                          attattTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGa               <  1:821725/93‑1 (MQ=255)

                                                                            tattTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATg             <  2:4686345/93‑1 (MQ=255)

                                                                            tattTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATg             <  1:5830711/93‑1 (MQ=255)

                                                                            tattTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATg             >  1:8795635/1‑93 (MQ=255)

                                                                             attTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATgg            >  2:3776861/1‑93 (MQ=255)

                                                                              tttCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGa           <  1:219447/93‑1 (MQ=255)

                                                                                tCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGaaa         <  2:1690486/93‑1 (MQ=255)

                                                                                tCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGaaa         >  1:2318427/1‑93 (MQ=255)

                                                                                 cAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAAt        <  2:9713271/93‑1 (MQ=255)

                                                                                   aTCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCg      <  2:7108862/93‑1 (MQ=255)

                                                                                   aTCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCg      <  1:7855709/93‑1 (MQ=255)

                                                                                      tGCCCGTTTCCAGTATGAGTAATCCCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTCCCTCAACGCCTGGCTGATGGAAATCGTcc   <  1:1113078/93‑1 (MQ=255)

                                                                                      tGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTcc   <  2:1344902/93‑1 (MQ=255)

                                                                                       gCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTccc  <  2:324164/93‑1 (MQ=255)

                                                                                       gCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTccc  >  1:4298566/1‑93 (MQ=255)

                                                                                       gCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTccc  <  2:8622382/93‑1 (MQ=255)

GATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC  >  NC_000913/3490237‑3490416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 266 total aligned reads displayed.

ATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTG  >  NC_000913/3490234‑3490420

ATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATGGCCGATTATTTCAATCTGCCC                                                                                               >  SRR4302540.4287070/1‑94 (MQ=60)

ATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCC                                                                                               >  SRR4302540.713787/1‑94 (MQ=60)

ATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCC                                                                                               <  SRR4302540.6984259/94‑1 (MQ=60)

ATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCC                                                                                               >  SRR4302540.2971819/1‑94 (MQ=60)

 TGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCG                                                                                              <  SRR4302540.4870023/94‑1 (MQ=60)

 TGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCG                                                                                              >  SRR4302540.8888933/1‑94 (MQ=60)

 TGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCG                                                                                              <  SRR4302540.1562148/94‑1 (MQ=60)

 TGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCG                                                                                              <  SRR4302540.8814548/94‑1 (MQ=60)

  GGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGT                                                                                             >  SRR4302540.4005607/1‑94 (MQ=60)

  GGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGT                                                                                             >  SRR4302540.6415093/1‑94 (MQ=60)

   GATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTT                                                                                            <  SRR4302540.3346187/94‑1 (MQ=60)

    ATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTT                                                                                           <  SRR4302540.7501386/94‑1 (MQ=60)

     TTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTC                                                                                          >  SRR4302540.4343828/1‑94 (MQ=60)

     TTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTC                                                                                          >  SRR4302540.8841527/1‑94 (MQ=60)

     TTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTC                                                                                          >  SRR4302540.9828284/1‑94 (MQ=60)

      TAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCC                                                                                         <  SRR4302540.7435625/94‑1 (MQ=60)

       AGCTTTCTCTCCTACGCACTGTCTGGTGCGTTGGTCATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCA                                                                                        <  SRR4302540.1690249/94‑1 (MQ=60)

        GCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAG                                                                                       <  SRR4302540.3086479/94‑1 (MQ=60)

        GCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAG                                                                                       <  SRR4302540.5715294/94‑1 (MQ=60)

        GCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAG                                                                                       <  SRR4302540.3775494/94‑1 (MQ=60)

        GCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAG                                                                                       <  SRR4302540.5720144/94‑1 (MQ=60)

        GCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAG                                                                                       >  SRR4302540.4205849/1‑94 (MQ=60)

         CTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGT                                                                                      <  SRR4302540.1599516/94‑1 (MQ=60)

         CTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGT                                                                                      >  SRR4302540.1877784/1‑94 (MQ=60)

          TTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTA                                                                                     <  SRR4302540.6742540/94‑1 (MQ=60)

           TTCTCTCCTACGTACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTAT                                                                                    <  SRR4302540.4345158/94‑1 (MQ=60)

           TTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGGTGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCTCGTAT                                                                                    >  SRR4302540.174420/1‑94 (MQ=60)

           TTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTAT                                                                                    <  SRR4302540.5741837/94‑1 (MQ=60)

           TTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTAT                                                                                    <  SRR4302540.218579/94‑1 (MQ=60)

           TTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTAT                                                                                    >  SRR4302540.6217090/1‑94 (MQ=60)

            TCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATG                                                                                   <  SRR4302540.9728757/94‑1 (MQ=60)

            TCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATG                                                                                   <  SRR4302540.5003436/94‑1 (MQ=60)

             CTCTCCTACGCACTGGCTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGA                                                                                  <  SRR4302540.6009053/94‑1 (MQ=60)

             CTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGA                                                                                  <  SRR4302540.7048876/94‑1 (MQ=60)

             CTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGA                                                                                  <  SRR4302540.1863292/94‑1 (MQ=60)

              TCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCGAGTATGAG                                                                                 >  SRR4302540.3784614/1‑94 (MQ=60)

              TCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAG                                                                                 <  SRR4302540.3427537/94‑1 (MQ=60)

              TCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAG                                                                                 >  SRR4302540.3784615/1‑94 (MQ=60)

              TCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAG                                                                                 >  SRR4302540.1913547/1‑94 (MQ=60)

               CTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGT                                                                                >  SRR4302540.8934603/1‑94 (MQ=60)

               CTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGT                                                                                >  SRR4302540.3860002/1‑94 (MQ=60)

               CTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGAGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGT                                                                                <  SRR4302540.8422461/94‑1 (MQ=60)

                TCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTA                                                                               <  SRR4302540.5039434/94‑1 (MQ=60)

                TCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTA                                                                               <  SRR4302540.5039431/94‑1 (MQ=60)

                TCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTA                                                                               <  SRR4302540.2164641/94‑1 (MQ=60)

                TCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTA                                                                               <  SRR4302540.7132451/94‑1 (MQ=60)

                 CCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAA                                                                              <  SRR4302540.7761231/94‑1 (MQ=60)

                  CTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAT                                                                             >  SRR4302540.477398/1‑94 (MQ=60)

                  CTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAT                                                                             <  SRR4302540.4398949/94‑1 (MQ=60)

                  CTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAT                                                                             <  SRR4302540.4494726/94‑1 (MQ=60)

                  CTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAT                                                                             <  SRR4302540.2110293/94‑1 (MQ=60)

                  CTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAT                                                                             <  SRR4302540.1533237/94‑1 (MQ=60)

                   TACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATA                                                                            <  SRR4302540.9246743/94‑1 (MQ=60)

                     CGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACC                                                                          >  SRR4302540.10148431/1‑94 (MQ=60)

                     CGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACC                                                                          >  SRR4302540.201526/1‑94 (MQ=60)

                      GCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCT                                                                         >  SRR4302540.8137659/1‑94 (MQ=60)

                      GCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCT                                                                         >  SRR4302540.2689482/1‑94 (MQ=60)

                       CACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTT                                                                        >  SRR4302540.3870965/1‑94 (MQ=60)

                       CACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTT                                                                        <  SRR4302540.3406290/94‑1 (MQ=60)

                        CCTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTC                                                                       <  SRR4302540.7269663/94‑1 (MQ=60)

                        ACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTC                                                                       >  SRR4302540.2412062/1‑94 (MQ=60)

                        ACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTC                                                                       >  SRR4302540.7651997/1‑94 (MQ=60)

                        ACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTC                                                                       >  SRR4302540.9704289/1‑94 (MQ=60)

                        ACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTC                                                                       >  SRR4302540.7651998/1‑94 (MQ=60)

                         CTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCA                                                                      <  SRR4302540.8112732/94‑1 (MQ=60)

                         CTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCA                                                                      <  SRR4302540.4183118/94‑1 (MQ=60)

                         CTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTAA                                                                      >  SRR4302540.7573888/1‑94 (MQ=60)

                          TGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCAC                                                                     >  SRR4302540.3583203/1‑94 (MQ=60)

                          TGACTGGTGCGTTGGTTATTGTCACCGGGATGGGGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCAC                                                                     <  SRR4302540.9846359/94‑1 (MQ=60)

                           GACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACC                                                                    <  SRR4302540.9864906/94‑1 (MQ=60)

                           GACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACC                                                                    <  SRR4302540.6926576/94‑1 (MQ=60)

                            ACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCT                                                                   >  SRR4302540.6501105/1‑94 (MQ=60)

                            ACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCT                                                                   <  SRR4302540.7394838/94‑1 (MQ=60)

                             CTTGTGCGTTTGGTATTGGCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTT                                                                  <  SRR4302540.5696935/94‑1 (MQ=60)

                               GGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCC                                                                <  SRR4302540.7100873/94‑1 (MQ=60)

                               GGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCC                                                                <  SRR4302540.3665029/94‑1 (MQ=60)

                                GTTCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCT                                                               <  SRR4302540.1144978/94‑1 (MQ=60)

                                 TGCGTTGGTTATTGTCGCCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTC                                                              <  SRR4302540.3684027/94‑1 (MQ=60)

                                 TGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTC                                                              >  SRR4302540.2786976/1‑94 (MQ=60)

                                   CGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAA                                                            <  SRR4302540.5951697/94‑1 (MQ=60)

                                   CGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAA                                                            >  SRR4302540.1809048/1‑94 (MQ=60)

                                   CGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAA                                                            <  SRR4302540.8095186/94‑1 (MQ=60)

                                    GTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAC                                                           <  SRR4302540.5122596/94‑1 (MQ=60)

                                    GTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAC                                                           <  SRR4302540.10004665/94‑1 (MQ=60)

                                    GTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAC                                                           <  SRR4302540.1019711/94‑1 (MQ=60)

                                    GTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAC                                                           <  SRR4302540.3813560/94‑1 (MQ=60)

                                    GTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAC                                                           >  SRR4302540.2468446/1‑94 (MQ=60)

                                     TTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACG                                                          >  SRR4302540.3328503/1‑94 (MQ=60)

                                     TTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACG                                                          <  SRR4302540.8080776/94‑1 (MQ=60)

                                     TTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACG                                                          <  SRR4302540.2971140/94‑1 (MQ=60)

                                     TTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGAATATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACG                                                          <  SRR4302540.8080775/94‑1 (MQ=60)

                                     TTAGTTATTGTCACCGGGATAGTGATGGAAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTACTACCTTCAACTTCCTCAAAG                                                          <  SRR4302540.9048323/94‑1 (MQ=60)

                                       GGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCG                                                        >  SRR4302540.2674181/1‑94 (MQ=60)

                                          TATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGC                                                     <  SRR4302540.4274301/94‑1 (MQ=60)

                                           ATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCA                                                    >  SRR4302540.5269387/1‑94 (MQ=60)

                                            TTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAT                                                   >  SRR4302540.8612863/1‑94 (MQ=60)

                                            TTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAT                                                   <  SRR4302540.7456081/94‑1 (MQ=60)

                                             TGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATT                                                  <  SRR4302540.9779462/94‑1 (MQ=60)

                                              GTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTT                                                 >  SRR4302540.2108653/1‑94 (MQ=60)

                                               TCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTT                                                >  SRR4302540.9374819/1‑94 (MQ=60)

                                               TCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTT                                                <  SRR4302540.7622567/94‑1 (MQ=60)

                                               TCACCGGGATGGGGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTT                                                <  SRR4302540.7354091/94‑1 (MQ=60)

                                                 ACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAA                                              >  SRR4302540.6715793/1‑94 (MQ=60)

                                                  CCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAAT                                             >  SRR4302540.2277891/1‑94 (MQ=60)

                                                  CCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAAT                                             <  SRR4302540.5094322/94‑1 (MQ=60)

                                                    GGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCT                                           <  SRR4302540.4862470/94‑1 (MQ=60)

                                                    GGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCT                                           >  SRR4302540.5264615/1‑94 (MQ=60)

                                                    GGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCT                                           <  SRR4302540.3261902/94‑1 (MQ=60)

                                                    GGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCG‑TTCCAGTATGAGTAATACCTTGACCTTCCTCAACTCCGGCCTTTTTATCTT                                          >  SRR4302540.1951950/1‑94 (MQ=60)

                                                     GGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTC                                          <  SRR4302540.340247/94‑1 (MQ=60)

                                                     GGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTC                                          <  SRR4302540.532897/94‑1 (MQ=60)

                                                      GATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCT                                         >  SRR4302540.7969226/1‑94 (MQ=60)

                                                      GATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCT                                         >  SRR4302540.5862828/1‑94 (MQ=60)

                                                      GATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCT                                         <  SRR4302540.3732269/94‑1 (MQ=60)

                                                       ATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTA                                        <  SRR4302540.5270444/94‑1 (MQ=60)

                                                       ATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTA                                        >  SRR4302540.4308420/1‑94 (MQ=60)

                                                         GGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATC                                      >  SRR4302540.6678317/1‑94 (MQ=60)

                                                         GGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATC                                      >  SRR4302540.6678316/1‑94 (MQ=60)

                                                         GGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATC                                      <  SRR4302540.9858752/94‑1 (MQ=60)

                                                         GGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATC                                      <  SRR4302540.609036/94‑1 (MQ=60)

                                                          GTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCT                                     <  SRR4302540.893370/94‑1 (MQ=60)

                                                          GTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCT                                     <  SRR4302540.401138/94‑1 (MQ=60)

                                                           TGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTT                                    <  SRR4302540.6219064/94‑1 (MQ=60)

                                                           TGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTT                                    >  SRR4302540.4266931/1‑94 (MQ=60)

                                                            GAGGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTC                                   <  SRR4302540.3373483/94‑1 (MQ=60)

                                                             ATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCC                                  <  SRR4302540.2857171/94‑1 (MQ=60)

                                                             ATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCC                                  >  SRR4302540.5364490/1‑94 (MQ=60)

                                                              TGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCT                                 >  SRR4302540.9242809/1‑94 (MQ=60)

                                                              TGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCT                                 >  SRR4302540.4567947/1‑94 (MQ=60)

                                                              TGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCT                                 >  SRR4302540.7868446/1‑94 (MQ=60)

                                                               GGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTC                                <  SRR4302540.6202281/94‑1 (MQ=60)

                                                               GGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTC                                >  SRR4302540.5387253/1‑94 (MQ=60)

                                                               GGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTC                                <  SRR4302540.9454596/94‑1 (MQ=60)

                                                               GGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTC                                >  SRR4302540.10122007/1‑94 (MQ=60)

                                                               GGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTC                                <  SRR4302540.4194040/94‑1 (MQ=60)

                                                                GGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCA                               <  SRR4302540.10015534/94‑1 (MQ=60)

                                                                GGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCA                               <  SRR4302540.4571813/94‑1 (MQ=60)

                                                                  AAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAAC                             <  SRR4302540.613780/94‑1 (MQ=60)

                                                                   AATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACG                            <  SRR4302540.2558107/94‑1 (MQ=60)

                                                                   AATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACG                            >  SRR4302540.6337380/1‑94 (MQ=60)

                                                                   AATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACG                            >  SRR4302540.8303742/1‑94 (MQ=60)

                                                                   AATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACG                            <  SRR4302540.4620000/94‑1 (MQ=60)

                                                                    ATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGC                           >  SRR4302540.9969622/1‑94 (MQ=60)

                                                                     TATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCC                          <  SRR4302540.10057814/94‑1 (MQ=60)

                                                                     TATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCC                          <  SRR4302540.6413565/94‑1 (MQ=60)

                                                                     TATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCC                          >  SRR4302540.4010372/1‑94 (MQ=60)

                                                                     TATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCC                          <  SRR4302540.4608548/94‑1 (MQ=60)

                                                                       TCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTG                        <  SRR4302540.3585014/94‑1 (MQ=60)

                                                                       TCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTG                        <  SRR4302540.4431704/94‑1 (MQ=60)

                                                                       TCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTG                        <  SRR4302540.4548488/94‑1 (MQ=60)

                                                                       TCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTG                        <  SRR4302540.7823900/94‑1 (MQ=60)

                                                                        CGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTTATCTCTATCTTCCTCAACGCCTGG                       <  SRR4302540.6649294/94‑1 (MQ=60)

                                                                          CCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCT                     >  SRR4302540.7603442/1‑94 (MQ=60)

                                                                          CCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCT                     <  SRR4302540.2454849/94‑1 (MQ=60)

                                                                          CCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCT                     <  SRR4302540.295244/94‑1 (MQ=60)

                                                                          CCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCT                     >  SRR4302540.8732291/1‑94 (MQ=60)

                                                                          CCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCT                     >  SRR4302540.6529156/1‑94 (MQ=60)

                                                                          CCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCAGGCT                     >  SRR4302540.909428/1‑94 (MQ=60)

                                                                           CGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTG                    <  SRR4302540.9285998/94‑1 (MQ=60)

                                                                           CGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTG                    <  SRR4302540.7807388/94‑1 (MQ=60)

                                                                           CGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTG                    >  SRR4302540.9923909/1‑94 (MQ=60)

                                                                           CGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTG                    >  SRR4302540.5469462/1‑94 (MQ=60)

                                                                            GATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGA                   >  SRR4302540.515485/1‑94 (MQ=60)

                                                                            GATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGA                   <  SRR4302540.2224792/94‑1 (MQ=60)

                                                                            GATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGA                   <  SRR4302540.8662282/94‑1 (MQ=60)

                                                                            GATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGA                   >  SRR4302540.515484/1‑94 (MQ=60)

                                                                             ATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGAT                  >  SRR4302540.5529075/1‑94 (MQ=60)

                                                                             ATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGAT                  <  SRR4302540.10109159/94‑1 (MQ=60)

                                                                             ATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGAT                  >  SRR4302540.10054726/1‑94 (MQ=60)

                                                                              TTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATG                 <  SRR4302540.576692/94‑1 (MQ=60)

                                                                              TTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATG                 >  SRR4302540.5107542/1‑94 (MQ=60)

                                                                              TTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATG                 >  SRR4302540.165971/1‑94 (MQ=60)

                                                                              TTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATG                 >  SRR4302540.575054/1‑94 (MQ=60)

                                                                              TTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATG                 <  SRR4302540.7455889/94‑1 (MQ=60)

                                                                              TTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATG                 <  SRR4302540.131064/94‑1 (MQ=60)

                                                                               TATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGG                <  SRR4302540.5895176/94‑1 (MQ=60)

                                                                                 TTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAA              <  SRR4302540.221579/94‑1 (MQ=60)

                                                                                  TTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAA             <  SRR4302540.9431343/94‑1 (MQ=60)

                                                                                  TTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAA             >  SRR4302540.4636886/1‑94 (MQ=60)

                                                                                  TTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAA             >  SRR4302540.2343386/1‑94 (MQ=60)

                                                                                   TCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCCCCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAAT            <  SRR4302540.1400087/94‑1 (MQ=60)

                                                                                    CAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGCTGGAAATC           >  SRR4302540.5182712/1‑94 (MQ=60)

                                                                                    CAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATC           >  SRR4302540.6715042/1‑94 (MQ=60)

                                                                                    CAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATC           <  SRR4302540.2305192/94‑1 (MQ=60)

                                                                                     AATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCG          <  SRR4302540.5431302/94‑1 (MQ=60)

                                                                                     AATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCG          <  SRR4302540.6405723/94‑1 (MQ=60)

                                                                                      ATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGT         <  SRR4302540.7947502/94‑1 (MQ=60)

                                                                                      ATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGT         <  SRR4302540.8565975/94‑1 (MQ=60)

                                                                                       TCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTC        >  SRR4302540.2602357/1‑94 (MQ=60)

                                                                                        CTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCC       >  SRR4302540.3242863/1‑94 (MQ=60)

                                                                                        CTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCC       >  SRR4302540.8946995/1‑94 (MQ=60)

                                                                                        CTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCC       >  SRR4302540.9293312/1‑94 (MQ=60)

                                                                                         TGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC      >  SRR4302540.3506586/1‑94 (MQ=60)

                                                                                         TGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC      >  SRR4302540.9305292/1‑94 (MQ=60)

                                                                                         TGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC      <  SRR4302540.8486179/94‑1 (MQ=60)

                                                                                            CCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTT   <  SRR4302540.9345118/94‑1 (MQ=60)

                                                                                            CCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTT   >  SRR4302540.1101773/1‑94 (MQ=60)

                                                                                            CCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCGCAACGCCTGGCTGATGGAAATCGTCCCGTT   >  SRR4302540.1101774/1‑94 (MQ=60)

                                                                                             CGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTG  <  SRR4302540.534904/94‑1 (MQ=60)

                                                                                             CGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTG  >  SRR4302540.9168273/1‑94 (MQ=60)

ATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTG  >  NC_000913/3490234‑3490420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`