Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,500,309	Δ1 bp	coding (333/363 nt)	b3372 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,500,308	0	C	.	99.7%	1625.3 / ‑3.8	361	coding (332/363 nt)	b3372	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (1/0); new base . (203/156); total (205/156)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.38e-01

Only 100 of 397 total aligned reads displayed.

CGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAA  >  NC_000913/3500216‑3500396

cGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgc                                                                                          <  2:1257880/93‑1 (MQ=255)

cGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgc                                                                                          <  1:2365304/93‑1 (MQ=255)

 gATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgcg                                                                                         >  1:8942823/1‑92 (MQ=255)

 gATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgcg                                                                                         >  2:6947613/1‑92 (MQ=255)

  aTGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTccgcgg                                                                                        >  1:10013852/1‑91 (MQ=255)

     aaCATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGccc                                                                                    <  2:4129720/93‑1 (MQ=255)

       cATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCAc                                                                                  >  1:2920996/1‑93 (MQ=255)

       cATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCAc                                                                                  <  2:8579100/93‑1 (MQ=255)

       cATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCAc                                                                                  >  2:6604943/1‑93 (MQ=255)

        atatGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCAcg                                                                                 >  1:798358/1‑93 (MQ=255)

         tatGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCAcgc                                                                                >  1:7459125/1‑93 (MQ=255)

         tatGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCAcgc                                                                                >  2:9059371/1‑93 (MQ=255)

         tatGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCAcgc                                                                                >  2:5463042/1‑93 (MQ=255)

         tatGCGGCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCAcgc                                                                                <  1:4247171/93‑1 (MQ=255)

             cGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGc                                                                            <  1:6313041/93‑1 (MQ=255)

               tCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTa                                                                          <  1:5053358/93‑1 (MQ=255)

                cgcgAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTAt                                                                         >  1:2108576/1‑93 (MQ=255)

                 gcgAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTAtc                                                                        >  1:9303193/1‑93 (MQ=255)

                 gcgAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTAtc                                                                        >  2:2582985/1‑93 (MQ=255)

                      aGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACg                                                                   <  2:2866240/93‑1 (MQ=255)

                       gCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGc                                                                  >  2:9393495/1‑93 (MQ=255)

                        ccTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGcc                                                                 <  1:4293520/93‑1 (MQ=255)

                        ccTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGcc                                                                 >  2:812917/1‑93 (MQ=255)

                        ccTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGcc                                                                 >  1:9437823/1‑93 (MQ=255)

                         cTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCa                                                                >  2:3617459/1‑93 (MQ=255)

                         cTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCa                                                                >  1:6120038/1‑93 (MQ=255)

                         cTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCa                                                                >  2:1977504/1‑93 (MQ=255)

                          tCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGCTTT‑CGGCGGCCCACGCGGGCTATCTCACGCCAc                                                               >  1:1519484/1‑93 (MQ=255)

                          tCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCAc                                                               >  2:1383460/1‑93 (MQ=255)

                            gACATGATCAAGCTGGCGATGGATATGGCAAAAGATATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCt                                                             <  1:808469/93‑1 (MQ=255)

                            gACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGGTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCCCCt                                                             >  1:7784157/1‑93 (MQ=255)

                             aCATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTa                                                            >  2:3713524/1‑93 (MQ=255)

                              cATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTaa                                                           >  2:3541443/1‑93 (MQ=255)

                               aTGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAAt                                                          >  1:1991822/1‑93 (MQ=255)

                               aTGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAAt                                                          >  2:6230719/1‑93 (MQ=255)

                               aTGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAAt                                                          >  2:871625/1‑93 (MQ=255)

                               aTGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAAt                                                          >  1:1786663/1‑93 (MQ=255)

                                tGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATg                                                         <  2:3853999/93‑1 (MQ=255)

                                tGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATg                                                         >  1:9722590/1‑93 (MQ=255)

                                 gATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGt                                                        <  2:1089665/93‑1 (MQ=255)

                                   tCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGttt                                                      >  2:9329051/1‑92 (MQ=255)

                                   tCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTa                                                      <  1:1353639/93‑1 (MQ=255)

                                     aaGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATc                                                    >  2:9818662/1‑93 (MQ=255)

                                     aaGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATc                                                    <  1:8262170/93‑1 (MQ=255)

                                      aGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCt                                                   <  1:4600318/93‑1 (MQ=255)

                                      aGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCt                                                   <  2:9600670/93‑1 (MQ=255)

                                      aGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCt                                                   >  2:7414711/1‑93 (MQ=255)

                                      aGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCt                                                   <  2:7946808/93‑1 (MQ=255)

                                       gCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTg                                                  >  1:1275401/1‑93 (MQ=255)

                                         tGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTggg                                                >  2:6821804/1‑93 (MQ=255)

                                         tGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTggg                                                <  1:7030172/93‑1 (MQ=255)

                                           gCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGa                                              <  1:7677990/93‑1 (MQ=255)

                                           gCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGa                                              <  1:3583817/93‑1 (MQ=255)

                                              aTGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACgg                                           >  2:1583860/1‑93 (MQ=255)

                                              aTGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACgg                                           >  2:4523384/1‑93 (MQ=255)

                                              aTGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACgg                                           >  1:5277159/1‑93 (MQ=255)

                                                ggATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCt                                         >  2:2714827/1‑93 (MQ=255)

                                                 gATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTg                                        >  2:7832502/1‑93 (MQ=255)

                                                   tatGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGc                                      <  1:1656691/93‑1 (MQ=255)

                                                    atGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCa                                     >  2:4885601/1‑93 (MQ=255)

                                                    atGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCa                                     >  1:412984/1‑93 (MQ=255)

                                                      ggCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCaga                                   <  1:3006308/93‑1 (MQ=255)

                                                       gCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCagag                                  <  2:4335356/93‑1 (MQ=255)

                                                          aaaGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAAc                               <  2:6117016/93‑1 (MQ=255)

                                                          aaaGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAAc                               >  2:4736016/1‑93 (MQ=255)

                                                           aaGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAAcc                              >  2:9470228/1‑93 (MQ=255)

                                                            agagATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCt                             >  1:987365/1‑93 (MQ=255)

                                                            agagATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCt                             <  2:7191367/93‑1 (MQ=255)

                                                              agaTGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTaa                           <  1:8393330/93‑1 (MQ=255)

                                                               gaTGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAg                          <  1:3736846/93‑1 (MQ=255)

                                                               gaTGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAg                          >  2:4950915/1‑93 (MQ=255)

                                                               gaTGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAg                          >  1:790091/1‑93 (MQ=255)

                                                               gaTGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAg                          <  1:6463716/93‑1 (MQ=255)

                                                                aTGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCCCCTAATGTTATCTGGGGACTGCTGGCAGAGAACCTAAGc                         >  1:8860636/1‑93 (MQ=255)

                                                                 tGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCg                        >  2:7583464/1‑93 (MQ=255)

                                                                   aaCGCGGGTTAAACGCTGATTTCCG‑CGGCCCACGCGGGATATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGaa                      <  2:8965884/93‑1 (MQ=255)

                                                                    aCGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAAc                     <  2:572633/93‑1 (MQ=255)

                                                                    aCGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAAc                     >  1:6861915/1‑93 (MQ=255)

                                                                     cgcgGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACt                    >  1:4715283/1‑93 (MQ=255)

                                                                      gcgGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtg                   >  2:5090401/1‑93 (MQ=255)

                                                                       cgGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtgt                  >  2:3048978/1‑93 (MQ=255)

                                                                       cgGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtgt                  >  2:2984748/1‑93 (MQ=255)

                                                                         ggTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtgtgt                <  1:6718782/93‑1 (MQ=255)

                                                                          gTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACtgtgtg               <  1:269636/93‑1 (MQ=255)

                                                                           ttATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGACCCTAAGCGAACTGTGTGa              <  1:5463043/93‑1 (MQ=255)

                                                                           ttATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGa              <  1:447824/93‑1 (MQ=255)

                                                                           ttATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGa              <  2:2262559/93‑1 (MQ=255)

                                                                           ttATACGCTGATTTCCG‑CGGACCACGCGGGCTATCTCACGCCACCTCATGTTATCTGGGGACGGCTGGCAGAGAAACTAAGCGAACTGTGTGa              >  1:2597347/1‑93 (MQ=255)

                                                                            tataCGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAg             <  2:6369074/93‑1 (MQ=255)

                                                                            tataCGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAg             >  2:5975598/1‑93 (MQ=255)

                                                                             ataCGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGt            >  2:7273387/1‑93 (MQ=255)

                                                                             ataCGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGt            <  1:9053934/93‑1 (MQ=255)

                                                                              tccGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTa           <  2:4993805/91‑1 (MQ=255)

                                                                              taCGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTa           <  1:6924325/93‑1 (MQ=255)

                                                                                  cTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAcgcg       >  2:1788886/1‑93 (MQ=255)

                                                                                  cTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAcgcg       >  1:2424053/1‑93 (MQ=255)

                                                                                  cTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAcgcg       >  1:7231854/1‑93 (MQ=255)

                                                                                  cTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAcgcg       <  1:8551177/93‑1 (MQ=255)

                                                                                    gATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGa     >  2:9681645/1‑93 (MQ=255)

                                                                                       ttCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGaaaa  <  1:3215905/93‑1 (MQ=255)

CGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAA  >  NC_000913/3500216‑3500396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 204 total aligned reads displayed.

CGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGG  >  NC_000913/3500216‑3500402

CGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCG                                                                                               <  SRR4302540.2390774/94‑1 (MQ=60)

CGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCG                                                                                               >  SRR4302540.9047869/1‑94 (MQ=60)

CGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCG                                                                                               >  SRR4302540.8443727/1‑94 (MQ=60)

CGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGGTATACGCTGATTTCCGCG                                                                                               >  SRR4302540.9047870/1‑94 (MQ=60)

 GATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGG                                                                                              >  SRR4302540.10130435/1‑94 (MQ=60)

  ATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGC                                                                                            <  SRR4302540.6861751/94‑1 (MQ=60)

  ATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGC                                                                                            >  SRR4302540.7424102/1‑94 (MQ=60)

    GAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCC                                                                                          <  SRR4302540.6947609/94‑1 (MQ=60)

     AACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCA                                                                                         <  SRR4302540.6893535/94‑1 (MQ=60)

      ACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCAC                                                                                        >  SRR4302540.2953001/1‑94 (MQ=60)

       CATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACG                                                                                       >  SRR4302540.806837/1‑94 (MQ=60)

       CATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACG                                                                                       >  SRR4302540.8584119/1‑94 (MQ=60)

       CATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACG                                                                                       >  SRR4302540.7696150/1‑94 (MQ=60)

        ATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGC                                                                                      >  SRR4302540.4526966/1‑94 (MQ=60)

        ATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGC                                                                                      >  SRR4302540.3906495/1‑94 (MQ=60)

        ATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGC                                                                                      >  SRR4302540.7107910/1‑94 (MQ=60)

        ATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGC                                                                                      >  SRR4302540.7542294/1‑94 (MQ=60)

         TATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCG                                                                                     <  SRR4302540.4293380/94‑1 (MQ=60)

         TATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCG                                                                                     >  SRR4302540.3815160/1‑94 (MQ=60)

         TATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACACG                                                                                     <  SRR4302540.9907591/94‑1 (MQ=60)

         TATGCGGCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCG                                                                                     <  SRR4302540.4293379/94‑1 (MQ=60)

          ATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGG                                                                                    >  SRR4302540.4289850/1‑94 (MQ=60)

          ATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGG                                                                                    >  SRR4302540.8515428/1‑94 (MQ=60)

          ATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGG                                                                                    <  SRR4302540.2599646/94‑1 (MQ=60)

          ATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGG                                                                                    <  SRR4302540.1945090/94‑1 (MQ=60)

           TGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGG                                                                                   <  SRR4302540.163043/94‑1 (MQ=60)

             CGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCT                                                                                 <  SRR4302540.6383342/94‑1 (MQ=60)

             CGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCT                                                                                 <  SRR4302540.6383341/94‑1 (MQ=60)

             CGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCT                                                                                 >  SRR4302540.2383433/1‑94 (MQ=60)

              GTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTA                                                                                >  SRR4302540.1590000/1‑94 (MQ=60)

               TCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTAT                                                                               <  SRR4302540.1796759/94‑1 (MQ=60)

               TCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTAT                                                                               <  SRR4302540.5107987/94‑1 (MQ=60)

               TCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTAT                                                                               >  SRR4302540.2131204/1‑94 (MQ=60)

                CGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATC                                                                              >  SRR4302540.9414311/1‑94 (MQ=60)

                CGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATC                                                                              >  SRR4302540.9414310/1‑94 (MQ=60)

                 GCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCT                                                                             >  SRR4302540.5047866/1‑94 (MQ=60)

                 GCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCT                                                                             <  SRR4302540.9514258/94‑1 (MQ=60)

                 GCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCT                                                                             <  SRR4302540.1565479/94‑1 (MQ=60)

                 GCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCT                                                                             >  SRR4302540.6743897/1‑94 (MQ=60)

                 GCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCT                                                                             <  SRR4302540.5498346/94‑1 (MQ=60)

                   GAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCA                                                                           >  SRR4302540.802982/1‑94 (MQ=60)

                   GAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCA                                                                           >  SRR4302540.4322014/1‑94 (MQ=60)

                    AAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCAC                                                                          <  SRR4302540.3178876/94‑1 (MQ=60)

                       GCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCC                                                                       >  SRR4302540.9549904/1‑94 (MQ=60)

                       GCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCC                                                                       >  SRR4302540.1991064/1‑94 (MQ=60)

                        CCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCA                                                                      <  SRR4302540.4340232/94‑1 (MQ=60)

                        CCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCA                                                                      <  SRR4302540.8706579/94‑1 (MQ=60)

                        CCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCA                                                                      >  SRR4302540.6188197/1‑94 (MQ=60)

                         CTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGCTTT‑CGGCGGCCCACGCGGGCTATCTCACGCCAC                                                                     >  SRR4302540.1536300/1‑94 (MQ=60)

                         CTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCAC                                                                     >  SRR4302540.6475052/1‑94 (MQ=60)

                         CTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCAC                                                                     >  SRR4302540.1332692/1‑94 (MQ=60)

                         CTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCAC                                                                     >  SRR4302540.7852297/1‑94 (MQ=60)

                         CTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCAC                                                                     >  SRR4302540.252661/1‑94 (MQ=60)

                          TCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACC                                                                    <  SRR4302540.7723687/94‑1 (MQ=60)

                           CGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCT                                                                   >  SRR4302540.7875139/1‑94 (MQ=60)

                           CGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGGTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCCCCT                                                                   >  SRR4302540.7875140/1‑94 (MQ=60)

                            GACATGATCAAGCTGGCGATGGATATGGCAAAAGATATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTA                                                                  <  SRR4302540.817060/94‑1 (MQ=60)

                              CATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAAT                                                                >  SRR4302540.2786256/1‑94 (MQ=60)

                              CATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAAT                                                                >  SRR4302540.2013408/1‑94 (MQ=60)

                              CATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAAT                                                                <  SRR4302540.8376008/94‑1 (MQ=60)

                              CATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAAT                                                                >  SRR4302540.1806073/1‑94 (MQ=60)

                               ATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATG                                                               >  SRR4302540.7051126/1‑94 (MQ=60)

                               ATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATG                                                               >  SRR4302540.9836799/1‑94 (MQ=60)

                               ATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACCCCACCTAATG                                                               >  SRR4302540.1805406/1‑94 (MQ=60)

                                 GATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTT                                                             >  SRR4302540.1437726/1‑94 (MQ=60)

                                  ATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTA                                                            >  SRR4302540.8709620/1‑94 (MQ=60)

                                  ATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTA                                                            <  SRR4302540.935103/94‑1 (MQ=60)

                                   TCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTAT                                                           >  SRR4302540.4657812/1‑94 (MQ=60)

                                   TCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTAT                                                           <  SRR4302540.1357914/94‑1 (MQ=60)

                                   TCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTAT                                                           <  SRR4302540.1367888/94‑1 (MQ=60)

                                   TCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTAT                                                           <  SRR4302540.4451782/94‑1 (MQ=60)

                                   TCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTAT                                                           >  SRR4302540.9677691/1‑94 (MQ=60)

                                   TCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTAT                                                           >  SRR4302540.9475984/1‑94 (MQ=60)

                                     AAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCT                                                         <  SRR4302540.1508609/94‑1 (MQ=60)

                                     AAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCT                                                         <  SRR4302540.8358180/94‑1 (MQ=60)

                                      AGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGTGCTATCTCACGCCACCTAATGTTATCTG                                                        >  SRR4302540.1211405/1‑94 (MQ=60)

                                      AGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTG                                                        <  SRR4302540.5293675/94‑1 (MQ=60)

                                      AGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTG                                                        >  SRR4302540.5343189/1‑94 (MQ=60)

                                      AGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTG                                                        <  SRR4302540.7974763/94‑1 (MQ=60)

                                      AGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTG                                                        >  SRR4302540.1288547/1‑94 (MQ=60)

                                      AGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTG                                                        <  SRR4302540.4649760/94‑1 (MQ=60)

                                       GCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGG                                                       >  SRR4302540.1475890/1‑94 (MQ=60)

                                        CTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGG                                                      >  SRR4302540.2110659/1‑94 (MQ=60)

                                         TGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGG                                                     <  SRR4302540.7130538/94‑1 (MQ=60)

                                         TGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGG                                                     <  SRR4302540.8120615/94‑1 (MQ=60)

                                         TGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGG                                                     <  SRR4302540.2641370/94‑1 (MQ=60)

                                         TGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGG                                                     <  SRR4302540.2641369/94‑1 (MQ=60)

                                         TGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGG                                                     <  SRR4302540.7033143/94‑1 (MQ=60)

                                         TGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGG                                                     <  SRR4302540.4198080/94‑1 (MQ=60)

                                         TGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGG                                                     <  SRR4302540.7108289/94‑1 (MQ=60)

                                         TGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGG                                                     >  SRR4302540.8437274/1‑94 (MQ=60)

                                          GGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGA                                                    <  SRR4302540.1712022/94‑1 (MQ=60)

                                           GCGGTGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGAC                                                   <  SRR4302540.7764820/94‑1 (MQ=60)

                                           GCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGAC                                                   <  SRR4302540.7764819/94‑1 (MQ=60)

                                           GCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGAC                                                   <  SRR4302540.3622963/94‑1 (MQ=60)

                                            CGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACG                                                  <  SRR4302540.131942/94‑1 (MQ=60)

                                             GATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGG                                                 >  SRR4302540.422454/1‑94 (MQ=60)

                                             GATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGG                                                 >  SRR4302540.403480/1‑94 (MQ=60)

                                             GATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGG                                                 >  SRR4302540.5334778/1‑94 (MQ=60)

                                             GATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGG                                                 >  SRR4302540.3023071/1‑94 (MQ=60)

                                              ATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGC                                                <  SRR4302540.7243216/94‑1 (MQ=60)

                                              ATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGC                                                >  SRR4302540.4840232/1‑94 (MQ=60)

                                              ATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGC                                                >  SRR4302540.3109072/1‑94 (MQ=60)

                                               TGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCT                                               >  SRR4302540.9205867/1‑94 (MQ=60)

                                                GGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTG                                              >  SRR4302540.3746425/1‑94 (MQ=60)

                                                GGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTG                                              >  SRR4302540.2809862/1‑94 (MQ=60)

                                                GGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTG                                              >  SRR4302540.7973351/1‑94 (MQ=60)

                                                GGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTG                                              >  SRR4302540.896909/1‑94 (MQ=60)

                                                 GATATTGCAAAAGAGATTAACGGGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGG                                             <  SRR4302540.8231225/94‑1 (MQ=60)

                                                   TATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCA                                           <  SRR4302540.1674745/94‑1 (MQ=60)

                                                   TATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCA                                           <  SRR4302540.1106217/94‑1 (MQ=60)

                                                   TATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCA                                           >  SRR4302540.417313/1‑94 (MQ=60)

                                                   TATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCA                                           >  SRR4302540.8080276/1‑94 (MQ=60)

                                                   TATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCA                                           <  SRR4302540.986679/94‑1 (MQ=60)

                                                    ATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAG                                          >  SRR4302540.6622719/1‑94 (MQ=60)

                                                    ATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAG                                          >  SRR4302540.6622720/1‑94 (MQ=60)

                                                      GGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAG                                        <  SRR4302540.9104101/94‑1 (MQ=60)

                                                      GGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAG                                        <  SRR4302540.80686/94‑1 (MQ=60)

                                                      GGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAG                                        <  SRR4302540.3039404/94‑1 (MQ=60)

                                                        GAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAA                                      <  SRR4302540.2036821/94‑1 (MQ=60)

                                                        CAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAA                                      <  SRR4302540.8198003/94‑1 (MQ=60)

                                                        CAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAA                                      <  SRR4302540.6347152/94‑1 (MQ=60)

                                                        CAAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAA                                      >  SRR4302540.6961333/1‑94 (MQ=60)

                                                         AAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAAC                                     >  SRR4302540.6877237/1‑94 (MQ=60)

                                                         AAAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAAC                                     <  SRR4302540.2977670/94‑1 (MQ=60)

                                                          AAAGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACC                                    >  SRR4302540.9007009/1‑94 (MQ=60)

                                                            AGAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTA                                  <  SRR4302540.429525/94‑1 (MQ=60)

                                                             GAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAA                                 <  SRR4302540.8859584/94‑1 (MQ=60)

                                                             GAGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAA                                 <  SRR4302540.7275998/94‑1 (MQ=60)

                                                              AGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAG                                >  SRR4302540.798487/1‑94 (MQ=60)

                                                              AGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAG                                <  SRR4302540.8490732/94‑1 (MQ=60)

                                                              AGATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAG                                >  SRR4302540.3655060/1‑94 (MQ=60)

                                                               GATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCCCCTAATGTTATCTGGGGACTGCTGGCAGAGAACCTAAGC                               >  SRR4302540.8963164/1‑94 (MQ=60)

                                                               GATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGC                               <  SRR4302540.6535654/94‑1 (MQ=60)

                                                               GATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGC                               <  SRR4302540.3777617/94‑1 (MQ=60)

                                                               GATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGC                               <  SRR4302540.4969700/94‑1 (MQ=60)

                                                                ATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCG                              <  SRR4302540.8012217/94‑1 (MQ=60)

                                                                ATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCG                              >  SRR4302540.2312250/1‑94 (MQ=60)

                                                                ATGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCG                              <  SRR4302540.5727562/94‑1 (MQ=60)

                                                                 TGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGA                             <  SRR4302540.7382709/94‑1 (MQ=60)

                                                                 TGAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGA                             >  SRR4302540.348971/1‑94 (MQ=60)

                                                                  GAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAA                            <  SRR4302540.9964030/94‑1 (MQ=60)

                                                                  GAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAA                            >  SRR4302540.4728289/1‑94 (MQ=60)

                                                                  GAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAA                            >  SRR4302540.3220539/1‑94 (MQ=60)

                                                                  GAACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAA                            >  SRR4302540.7659356/1‑94 (MQ=60)

                                                                   AACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAAC                           >  SRR4302540.2415553/1‑94 (MQ=60)

                                                                   AACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAAC                           >  SRR4302540.6937963/1‑94 (MQ=60)

                                                                    ACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACT                          <  SRR4302540.4055508/94‑1 (MQ=60)

                                                                    ACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACT                          >  SRR4302540.4765655/1‑94 (MQ=60)

                                                                    ACGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACT                          >  SRR4302540.4765656/1‑94 (MQ=60)

                                                                     CGCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTG                         >  SRR4302540.5231060/1‑94 (MQ=60)

                                                                      GCGGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGT                        <  SRR4302540.6522727/94‑1 (MQ=60)

                                                                        GGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGT                      <  SRR4302540.8978629/94‑1 (MQ=60)

                                                                        GGGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGT                      <  SRR4302540.2516700/94‑1 (MQ=60)

                                                                         GGTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTG                     <  SRR4302540.6792926/94‑1 (MQ=60)

                                                                          GTTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGA                    <  SRR4302540.272291/94‑1 (MQ=60)

                                                                          GTTATACGCTGATTTCCG‑CGGACCACGCGGGCTATCTCACGCCACCTCATGTTATCTGGGGACGGCTGGCAGAGAAACTAAGCGAACTGTGTGA                    >  SRR4302540.2625357/1‑94 (MQ=60)

                                                                          GTTATACGCTGATTTCCG‑CGGACCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGCCGGCTGGCAGAGAACCTAAGCGAACTGTGTGA                    >  SRR4302540.8038439/1‑94 (MQ=60)

                                                                           gtatcCGCTGATTTCCGCC‑GCCCACGCGGTCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAG                   <  SRR4302540.3481017/89‑1 (MQ=60)

                                                                           TTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTTACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTCAGCGAACTGCGGGAG                   >  SRR4302540.2307340/1‑94 (MQ=60)

                                                                           TTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGACCCTAAGCGAACTGTGTGAG                   <  SRR4302540.5523177/94‑1 (MQ=60)

                                                                           TTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAG                   >  SRR4302540.9740779/1‑94 (MQ=60)

                                                                           TTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAG                   >  SRR4302540.3716815/1‑94 (MQ=60)

                                                                           TTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAG                   >  SRR4302540.4601693/1‑94 (MQ=60)

                                                                           TTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAG                   <  SRR4302540.452594/94‑1 (MQ=60)

                                                                           TTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAG                   <  SRR4302540.4588490/94‑1 (MQ=60)

                                                                           TTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAG                   >  SRR4302540.9740780/1‑94 (MQ=60)

                                                                           TTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAG                   >  SRR4302540.5679672/1‑94 (MQ=60)

                                                                           TTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAG                   >  SRR4302540.6209320/1‑94 (MQ=60)

                                                                           TTATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAG                   <  SRR4302540.6941890/94‑1 (MQ=60)

                                                                            TATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGT                  >  SRR4302540.8240668/1‑94 (MQ=60)

                                                                             ATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTA                 <  SRR4302540.9162621/94‑1 (MQ=60)

                                                                             ATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTA                 <  SRR4302540.9162620/94‑1 (MQ=60)

                                                                             ATACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTA                 >  SRR4302540.2400888/1‑94 (MQ=60)

                                                                              TACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAATTGTGTGAGTAC                <  SRR4302540.6444526/94‑1 (MQ=60)

                                                                              TACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTAC                <  SRR4302540.7001383/94‑1 (MQ=60)

                                                                               ACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACG               >  SRR4302540.4521345/1‑94 (MQ=60)

                                                                               ACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACG               <  SRR4302540.2412352/94‑1 (MQ=60)

                                                                               ACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACG               <  SRR4302540.3446455/94‑1 (MQ=60)

                                                                               ACGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACG               >  SRR4302540.4521344/1‑94 (MQ=60)

                                                                                CGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGC              >  SRR4302540.208618/1‑94 (MQ=60)

                                                                                CGCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGC              >  SRR4302540.5967108/1‑94 (MQ=60)

                                                                                 GCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCG             >  SRR4302540.2450170/1‑94 (MQ=60)

                                                                                 GCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCG             >  SRR4302540.7312506/1‑94 (MQ=60)

                                                                                 GCTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGGTATCTGGGGCCGGCTGGCAGAGAACCagagcgaagtgggggaggaggcg             >  SRR4302540.1831618/1‑71 (MQ=60)

                                                                                  CTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGG            >  SRR4302540.9529275/1‑94 (MQ=60)

                                                                                  CTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGG            <  SRR4302540.8650505/94‑1 (MQ=60)

                                                                                  CTGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGG            >  SRR4302540.265542/1‑94 (MQ=60)

                                                                                   TGATTTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGA           >  SRR4302540.5340441/1‑94 (MQ=60)

                                                                                       TTCCG‑CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAAC       <  SRR4302540.3250827/94‑1 (MQ=60)

                                                                                          tcgCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACAT     <  SRR4302540.10000073/91‑1 (MQ=60)

                                                                                           cgCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGGACTGTGTGAGTACGCGGAAAACATC    >  SRR4302540.1539311/3‑94 (MQ=60)

                                                                                           cgCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATC    >  SRR4302540.3050709/3‑94 (MQ=60)

                                                                                           cgCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATC    >  SRR4302540.1838399/3‑94 (MQ=60)

                                                                                           cgCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATC    >  SRR4302540.1479447/3‑94 (MQ=60)

                                                                                           cgCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATC    >  SRR4302540.1396331/3‑94 (MQ=60)

                                                                                            GCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCG   >  SRR4302540.2115210/1‑94 (MQ=60)

                                                                                            GCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCG   <  SRR4302540.3336032/94‑1 (MQ=60)

                                                                                            GCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCG   <  SRR4302540.3336034/94‑1 (MQ=60)

                                                                                             CGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGG  <  SRR4302540.9692963/94‑1 (MQ=60)

CGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGG  >  NC_000913/3500216‑3500402

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`