Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,525,330	T→C	T408T (ACT→ACC)	yrfF →	putative dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,525,330	0	T	C	100.0%	1443.0 / NA	447	T408T (ACT→ACC)	yrfF	putative dehydrogenase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (217/230); total (217/230)

Only 100 of 460 total aligned reads displayed.

GCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT  >  NC_000913/3525241‑3525419

 ccaccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCg                                                                                       >  2:3440630/1‑93 (MQ=255)

   accaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGa                                                                                     <  2:5234432/93‑1 (MQ=255)

    ccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGaa                                                                                    >  1:7823941/1‑93 (MQ=255)

    ccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGaa                                                                                    >  1:5883698/1‑93 (MQ=255)

     caGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGCATGTGTAATATTCGAACCTCCGGAAc                                                                                   >  1:9218674/1‑93 (MQ=255)

     caGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAAc                                                                                   >  2:8358649/1‑93 (MQ=255)

      aGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAAcc                                                                                  >  1:1735571/1‑93 (MQ=255)

       gCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCt                                                                                 >  2:8715798/1‑93 (MQ=255)

       gCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCt                                                                                 >  2:314315/1‑93 (MQ=255)

         gTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTgg                                                                               <  1:2264058/93‑1 (MQ=255)

          tAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGa                                                                              <  2:623635/93‑1 (MQ=255)

           caaaCAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATACTCGAACCTCCGGAACCTGGAg                                                                             <  1:1884870/92‑1 (MQ=255)

           aaaaCAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAg                                                                             >  1:3493505/1‑93 (MQ=255)

             aacaacTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAgcg                                                                           <  1:5237064/93‑1 (MQ=255)

                 acTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGaa                                                                       >  2:4567294/1‑93 (MQ=255)

                 acTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGaa                                                                       >  1:1459202/1‑93 (MQ=255)

                   cggCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGaaaa                                                                     <  1:3073596/92‑1 (MQ=255)

                   cggCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGaaaa                                                                     <  2:6569638/92‑1 (MQ=255)

                    ggCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAc                                                                    >  1:3716629/1‑93 (MQ=255)

                    ggCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAc                                                                    >  2:9283721/1‑93 (MQ=255)

                     gCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAcc                                                                   >  2:3753943/1‑93 (MQ=255)

                     gCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAcc                                                                   <  2:8071065/93‑1 (MQ=255)

                       tGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCaa                                                                 <  2:7168564/93‑1 (MQ=255)

                       tGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCaa                                                                 >  1:2354496/1‑93 (MQ=255)

                        gACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAAt                                                                <  2:8802376/93‑1 (MQ=255)

                        gACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAAt                                                                >  2:4922112/1‑93 (MQ=255)

                        gACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAAt                                                                >  2:2108127/1‑93 (MQ=255)

                         gcGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAAtt                                                               <  1:7125120/92‑1 (MQ=255)

                           gCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCa                                                             <  2:9127761/93‑1 (MQ=255)

                             tGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATCCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCAcc                                                           <  2:195069/93‑1 (MQ=255)

                              ggCGTGGGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCt                                                          <  2:1653083/93‑1 (MQ=255)

                              ggCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCt                                                          <  2:2897605/93‑1 (MQ=255)

                              ggCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCt                                                          >  1:4313379/1‑93 (MQ=255)

                              ggCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCt                                                          <  2:6764835/93‑1 (MQ=255)

                              ggCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCt                                                          >  2:1868767/1‑93 (MQ=255)

                              ggCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCt                                                          <  1:8264890/93‑1 (MQ=255)

                               gCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGACCCTCCGGAACCTGGAGCGCGAAAACCAATTCACCtt                                                         <  1:4189579/93‑1 (MQ=255)

                               gCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCtt                                                         <  1:4999221/93‑1 (MQ=255)

                                 gTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCtttt                                                       <  1:2646242/93‑1 (MQ=255)

                                 gTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCtttt                                                       >  1:4839092/1‑93 (MQ=255)

                                  tGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCttttt                                                      >  1:8394731/1‑93 (MQ=255)

                                  tGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCttttt                                                      <  1:6943092/93‑1 (MQ=255)

                                  tGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCttttt                                                      >  2:7404855/1‑93 (MQ=255)

                                  ggCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCttttt                                                      <  2:7834543/92‑1 (MQ=255)

                                   gCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCtttttt                                                     <  2:3495662/93‑1 (MQ=255)

                                      ggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCTAAAACCAATTCACCTTTTTTAcc                                                  >  2:5503960/1‑93 (MQ=255)

                                      ggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAcc                                                  <  2:4369395/93‑1 (MQ=255)

                                      ggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAcc                                                  <  1:9063594/93‑1 (MQ=255)

                                      ggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAcc                                                  <  1:9853362/93‑1 (MQ=255)

                                        tAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGt                                                >  2:7617028/1‑93 (MQ=255)

                                           gCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTg                                             >  1:6625461/1‑93 (MQ=255)

                                            cGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGa                                            <  1:5487633/93‑1 (MQ=255)

                                            cGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGa                                            <  1:3915235/93‑1 (MQ=255)

                                            cGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGa                                            <  1:71930/93‑1 (MQ=255)

                                            cGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCGGGAGCGCGAAAACCAATTCCCCTTTTTTACCGTTTGa                                            <  1:7600052/93‑1 (MQ=255)

                                             gATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAc                                           <  2:5635160/93‑1 (MQ=255)

                                             gATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAc                                           <  1:8078486/93‑1 (MQ=255)

                                              aTACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACt                                          <  2:2708725/93‑1 (MQ=255)

                                               tACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTg                                         <  2:3268577/93‑1 (MQ=255)

                                                 cATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCt                                       >  2:3346620/1‑93 (MQ=255)

                                                  aTTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTc                                      <  1:749768/93‑1 (MQ=255)

                                                  aTTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTc                                      >  2:5920906/1‑93 (MQ=255)

                                                  aTTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTc                                      <  1:2158399/93‑1 (MQ=255)

                                                  aTTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTAACCTTTTTTACCGTTTGACTGCTc                                      <  2:4710010/93‑1 (MQ=255)

                                                     gCGTATTAGCGGTGCGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAACCCAATGCACCTTTTTTACCGTTTGACTGCTCGCa                                   <  2:696090/93‑1 (MQ=255)

                                                     gCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCa                                   <  2:9601215/93‑1 (MQ=255)

                                                     gCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCa                                   <  1:5697870/93‑1 (MQ=255)

                                                       gTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGa                                 >  2:1240098/1‑93 (MQ=255)

                                                         aTTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGatc                               <  1:8863475/93‑1 (MQ=255)

                                                          ttAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGatca                              >  2:6366541/1‑93 (MQ=255)

                                                           tAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGatcat                             <  2:852957/93‑1 (MQ=255)

                                                            aGCGGTACGGGTATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGatcatc                            <  2:9878394/93‑1 (MQ=255)

                                                            aGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGatcatc                            >  1:7882231/1‑93 (MQ=255)

                                                             gCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCt                           <  1:5592337/93‑1 (MQ=255)

                                                             gCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCt                           >  1:1404601/1‑93 (MQ=255)

                                                              cGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTg                          >  2:5336558/1‑93 (MQ=255)

                                                              cGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTg                          >  2:1077953/1‑93 (MQ=255)

                                                               ggTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTgg                         <  2:4077336/93‑1 (MQ=255)

                                                               ggTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTgg                         >  2:7057624/1‑93 (MQ=255)

                                                               ggTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAAGTCACCGTTTTTACCGTTTGACTGCTCGCAGATCATCggg                         >  2:8977635/1‑93 (MQ=255)

                                                                 tACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGaa                       >  1:6329308/1‑93 (MQ=255)

                                                                 tACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGaa                       <  1:6487083/93‑1 (MQ=255)

                                                                 tACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGaa                       >  1:998575/1‑93 (MQ=255)

                                                                  aCGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAac                      <  1:2845770/93‑1 (MQ=255)

                                                                    gggAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacga                    <  1:6781143/93‑1 (MQ=255)

                                                                     ggAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacgac                   >  2:1384027/1‑93 (MQ=255)

                                                                     ggAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacgac                   <  2:4263714/93‑1 (MQ=255)

                                                                          gtgtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCg              >  1:6087994/1‑93 (MQ=255)

                                                                           tgtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGc             <  2:5705013/93‑1 (MQ=255)

                                                                           tgtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGc             <  2:2470217/93‑1 (MQ=255)

                                                                           tgtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGc             <  1:10029084/93‑1 (MQ=255)

                                                                            gtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCt            >  2:7934015/1‑93 (MQ=255)

                                                                             tAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTc           >  1:8648072/1‑93 (MQ=255)

                                                                              aaTATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCa          <  1:4575741/93‑1 (MQ=255)

                                                                               atatTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAt         <  1:3376024/93‑1 (MQ=255)

                                                                                tatTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAtt        >  2:725712/1‑93 (MQ=255)

                                                                                  ttCTAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGc      <  2:5197546/93‑1 (MQ=255)

                                                                                    cGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCa    <  1:9760040/93‑1 (MQ=255)

                                                                                    cGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCa    <  1:1135818/93‑1 (MQ=255)

                                                                                     gAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAt   <  2:6136612/93‑1 (MQ=255)

GCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT  >  NC_000913/3525241‑3525419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 239 total aligned reads displayed.

TGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCA  >  NC_000913/3525237‑3525423

TGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACC                                                                                               <  SRR4302540.10047250/94‑1 (MQ=60)

TGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACC                                                                                               <  SRR4302540.6139796/94‑1 (MQ=60)

TGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACC                                                                                               >  SRR4302540.3541131/1‑94 (MQ=60)

TGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACC                                                                                               <  SRR4302540.1080504/94‑1 (MQ=60)

 GAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCT                                                                                              <  SRR4302540.6629751/94‑1 (MQ=60)

  AAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTC                                                                                             <  SRR4302540.8104846/94‑1 (MQ=60)

   AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCC                                                                                            >  SRR4302540.9279224/1‑94 (MQ=60)

     CCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGG                                                                                          >  SRR4302540.1847680/1‑94 (MQ=60)

     CCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGG                                                                                          >  SRR4302540.8393957/1‑94 (MQ=60)

     CCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGG                                                                                          >  SRR4302540.8967275/1‑94 (MQ=60)

       ACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAA                                                                                        >  SRR4302540.4838357/1‑94 (MQ=60)

       ACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAA                                                                                        >  SRR4302540.6378440/1‑94 (MQ=60)

       ACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAA                                                                                        >  SRR4302540.5948710/1‑94 (MQ=60)

       ACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAA                                                                                        >  SRR4302540.7915372/1‑94 (MQ=60)

       ACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGGATTAGCGGTACGCGAATGTGTAATATTCGAACCTCCGGAA                                                                                        >  SRR4302540.6378439/1‑94 (MQ=60)

        CCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGCATGTGTAATATTCGAACCTCCGGAAC                                                                                       >  SRR4302540.9329250/1‑94 (MQ=60)

         CAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACC                                                                                      <  SRR4302540.8887892/94‑1 (MQ=60)

         CAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACC                                                                                      >  SRR4302540.1754308/1‑94 (MQ=60)

          AGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCT                                                                                     <  SRR4302540.6190457/94‑1 (MQ=60)

          AGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCT                                                                                     >  SRR4302540.9488464/1‑94 (MQ=60)

          AGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATCCGAACCTCCGGAACCG                                                                                     >  SRR4302540.7986917/1‑94 (MQ=60)

           GCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTG                                                                                    >  SRR4302540.7197824/1‑94 (MQ=60)

            CGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGG                                                                                   >  SRR4302540.8969323/1‑94 (MQ=60)

            CGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGG                                                                                   >  SRR4302540.6582908/1‑94 (MQ=60)

             gtaaaacaacgcgcgcacgcttggcTGCGGGTAGCCGATACATTTCGTATTAGCGGTACGGGAATGTGGAATATTCGAACCTCCGGAACCTGGA                                                                                  <  SRR4302540.2288354/69‑1 (MQ=60)

             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  <  SRR4302540.9113491/94‑1 (MQ=60)

             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  >  SRR4302540.4301277/1‑94 (MQ=60)

             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  >  SRR4302540.4844384/1‑94 (MQ=60)

             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  <  SRR4302540.3216893/94‑1 (MQ=60)

             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  <  SRR4302540.2141989/94‑1 (MQ=60)

             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  <  SRR4302540.3216894/94‑1 (MQ=60)

             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  >  SRR4302540.5943317/1‑94 (MQ=60)

             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  >  SRR4302540.3732592/1‑94 (MQ=60)

             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  <  SRR4302540.571780/94‑1 (MQ=60)

             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  >  SRR4302540.6613529/1‑94 (MQ=60)

             GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  >  SRR4302540.4301278/1‑94 (MQ=60)

             GTAAAACAACAGGCTGACGCGGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA                                                                                  <  SRR4302540.3795823/94‑1 (MQ=60)

              TAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAG                                                                                 >  SRR4302540.3531555/1‑94 (MQ=60)

              TAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAG                                                                                 <  SRR4302540.5968147/94‑1 (MQ=60)

               CAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATACTCGAACCTCCGGAACCTGGAGG                                                                                <  SRR4302540.1905512/94‑1 (MQ=60)

               AAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGC                                                                                >  SRR4302540.3771422/1‑94 (MQ=60)

               AAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGC                                                                                <  SRR4302540.9274978/94‑1 (MQ=60)

               AAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGC                                                                                <  SRR4302540.66148/94‑1 (MQ=60)

               AAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGGATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGC                                                                                <  SRR4302540.1591415/94‑1 (MQ=60)

                 AACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGC                                                                              <  SRR4302540.5294194/94‑1 (MQ=60)

                  ACAACTGGCGGACGCTGGCGTGCGGGTAGGCGATACATGGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCG                                                                             <  SRR4302540.6611646/94‑1 (MQ=60)

                   CAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGA                                                                            >  SRR4302540.1150293/1‑94 (MQ=60)

                    AACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAA                                                                           >  SRR4302540.1475090/1‑94 (MQ=60)

                    AACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAA                                                                           >  SRR4302540.7956284/1‑94 (MQ=60)

                      cggggTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAA                                                                         <  SRR4302540.4532318/89‑1 (MQ=60)

                       TGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAC                                                                        <  SRR4302540.1847089/94‑1 (MQ=60)

                       TGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAC                                                                        >  SRR4302540.3757179/1‑94 (MQ=60)

                       CGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAC                                                                        <  SRR4302540.3107318/94‑1 (MQ=60)

                        GGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACC                                                                       <  SRR4302540.7034195/94‑1 (MQ=60)

                          CTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAA                                                                     >  SRR4302540.2379855/1‑94 (MQ=60)

                           TGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAACCCAGT                                                                    >  SRR4302540.2643726/1‑94 (MQ=60)

                           TGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAAT                                                                    >  SRR4302540.2287695/1‑94 (MQ=60)

                            GACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATT                                                                   <  SRR4302540.7968111/94‑1 (MQ=60)

                             GCGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTC                                                                  <  SRR4302540.7204471/94‑1 (MQ=60)

                             ACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTC                                                                  >  SRR4302540.5665881/1‑94 (MQ=60)

                              CGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCA                                                                 <  SRR4302540.10049905/94‑1 (MQ=60)

                               GCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCAC                                                                <  SRR4302540.6755303/94‑1 (MQ=60)

                                CTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACC                                                               <  SRR4302540.3517370/94‑1 (MQ=60)

                                CTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACC                                                               <  SRR4302540.109620/94‑1 (MQ=60)

                                   GCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGACCCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTT                                                            <  SRR4302540.4235137/94‑1 (MQ=60)

                                   GCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTT                                                            <  SRR4302540.7779836/94‑1 (MQ=60)

                                   GCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTT                                                            <  SRR4302540.8560586/94‑1 (MQ=60)

                                   GCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTT                                                            <  SRR4302540.5053348/94‑1 (MQ=60)

                                    GGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTT                                                           <  SRR4302540.2353890/94‑1 (MQ=60)

                                    CGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTT                                                           >  SRR4302540.4890925/1‑94 (MQ=60)

                                    CGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTT                                                           <  SRR4302540.1420342/94‑1 (MQ=60)

                                     GTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTT                                                          >  SRR4302540.8492148/1‑94 (MQ=60)

                                     GTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTT                                                          <  SRR4302540.2674950/94‑1 (MQ=60)

                                     GTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTT                                                          <  SRR4302540.6784187/94‑1 (MQ=60)

                                     GTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTT                                                          <  SRR4302540.3609299/94‑1 (MQ=60)

                                      TGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTT                                                         <  SRR4302540.7020377/94‑1 (MQ=60)

                                        CGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAC                                                       >  SRR4302540.1595374/1‑94 (MQ=60)

                                        CGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAC                                                       >  SRR4302540.8335185/1‑94 (MQ=60)

                                        CGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAC                                                       >  SRR4302540.4800073/1‑94 (MQ=60)

                                        CGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCCGAACCTGGACGGCGAAAACCAATTAACCCTCTTTAC                                                       >  SRR4302540.9982499/1‑94 (MQ=60)

                                          GGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCG                                                     <  SRR4302540.9968519/94‑1 (MQ=60)

                                          GGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCG                                                     <  SRR4302540.6706625/94‑1 (MQ=60)

                                          GGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCG                                                     <  SRR4302540.9172420/94‑1 (MQ=60)

                                          GGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCG                                                     <  SRR4302540.5973883/94‑1 (MQ=60)

                                          GGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCG                                                     <  SRR4302540.7382458/94‑1 (MQ=60)

                                           GTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGT                                                    >  SRR4302540.2221461/1‑94 (MQ=60)

                                           GTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGAAGCCCGAAAACAAATCCACCTTTTTTACCGT                                                    >  SRR4302540.7471025/1‑94 (MQ=60)

                                            TAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTT                                                   <  SRR4302540.570150/94‑1 (MQ=60)

                                            TAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTT                                                   >  SRR4302540.7150679/1‑94 (MQ=60)

                                             AGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTT                                                  <  SRR4302540.5009318/94‑1 (MQ=60)

                                             AGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTT                                                  <  SRR4302540.4293238/94‑1 (MQ=60)

                                              GGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTG                                                 <  SRR4302540.490354/94‑1 (MQ=60)

                                              GGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTG                                                 <  SRR4302540.758806/94‑1 (MQ=60)

                                              GGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTG                                                 <  SRR4302540.7258274/94‑1 (MQ=60)

                                               GCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGA                                                <  SRR4302540.8241121/94‑1 (MQ=60)

                                                CGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAC                                               <  SRR4302540.7685450/94‑1 (MQ=60)

                                                CGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAC                                               <  SRR4302540.7018682/94‑1 (MQ=60)

                                                CGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAC                                               >  SRR4302540.4211654/1‑94 (MQ=60)

                                                CGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAC                                               <  SRR4302540.8922754/94‑1 (MQ=60)

                                                CGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAC                                               <  SRR4302540.2801764/94‑1 (MQ=60)

                                                CGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAC                                               <  SRR4302540.9933207/94‑1 (MQ=60)

                                                CGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAC                                               <  SRR4302540.3957637/94‑1 (MQ=60)

                                                CGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCGGGAGCGCGAAAACCAATTCCCCTTTTTTACCGTTTGAC                                               <  SRR4302540.7685451/94‑1 (MQ=60)

                                                 GATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACT                                              <  SRR4302540.8172243/94‑1 (MQ=60)

                                                 GATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACT                                              >  SRR4302540.2706915/1‑94 (MQ=60)

                                                  ATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTG                                             >  SRR4302540.962527/1‑94 (MQ=60)

                                                  ATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTG                                             <  SRR4302540.1536231/94‑1 (MQ=60)

                                                  ATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTG                                             <  SRR4302540.8172776/94‑1 (MQ=60)

                                                   TACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGC                                            >  SRR4302540.6418777/1‑94 (MQ=60)

                                                    ACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCT                                           >  SRR4302540.552/1‑94 (MQ=60)

                                                    ACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCT                                           >  SRR4302540.6439200/1‑94 (MQ=60)

                                                     CATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTC                                          >  SRR4302540.2789513/1‑94 (MQ=60)

                                                     CATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTC                                          <  SRR4302540.103979/94‑1 (MQ=60)

                                                      ATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCG                                         <  SRR4302540.6979654/94‑1 (MQ=60)

                                                      ATTGCGTATTAGCGGTAAGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCG                                         <  SRR4302540.2181640/94‑1 (MQ=60)

                                                       TTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGC                                        >  SRR4302540.7267514/1‑94 (MQ=60)

                                                       TTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCAGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGC                                        >  SRR4302540.2963103/1‑94 (MQ=60)

                                                        TGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCA                                       <  SRR4302540.6785641/94‑1 (MQ=60)

                                                         GCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAG                                      >  SRR4302540.7746637/1‑94 (MQ=60)

                                                         GCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAG                                      <  SRR4302540.5123319/94‑1 (MQ=60)

                                                         GCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAG                                      <  SRR4302540.5760601/94‑1 (MQ=60)

                                                          CGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGTTCGCAGA                                     >  SRR4302540.2425561/1‑94 (MQ=60)

                                                          CGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGA                                     >  SRR4302540.8502176/1‑94 (MQ=60)

                                                          CGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGA                                     <  SRR4302540.207214/94‑1 (MQ=60)

                                                           GTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGAT                                    >  SRR4302540.729944/1‑94 (MQ=60)

                                                           GTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGAT                                    >  SRR4302540.9917624/1‑94 (MQ=60)

                                                           GTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGAT                                    <  SRR4302540.5826145/94‑1 (MQ=60)

                                                            TATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGGCTGCTCGCAGATC                                   <  SRR4302540.3586342/94‑1 (MQ=60)

                                                            TATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATC                                   >  SRR4302540.5165510/1‑94 (MQ=60)

                                                             ATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCA                                  <  SRR4302540.4533459/94‑1 (MQ=60)

                                                             ATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCA                                  <  SRR4302540.8966041/94‑1 (MQ=60)

                                                             ATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCA                                  >  SRR4302540.579335/1‑94 (MQ=60)

                                                              TTAGCTGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCAT                                 <  SRR4302540.2371689/94‑1 (MQ=60)

                                                              TTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCAT                                 >  SRR4302540.5603654/1‑94 (MQ=60)

                                                              TTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCAT                                 <  SRR4302540.6985098/94‑1 (MQ=60)

                                                               TAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATC                                >  SRR4302540.7974267/1‑94 (MQ=60)

                                                               TAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATC                                <  SRR4302540.4290544/94‑1 (MQ=60)

                                                                AGCTGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCT                               <  SRR4302540.3193533/94‑1 (MQ=60)

                                                                AGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCT                               <  SRR4302540.1266151/94‑1 (MQ=60)

                                                                AGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCT                               >  SRR4302540.1419727/1‑94 (MQ=60)

                                                                 GCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTG                              <  SRR4302540.5653870/94‑1 (MQ=60)

                                                                   GGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGA                            >  SRR4302540.7648575/1‑94 (MQ=60)

                                                                   GGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGA                            <  SRR4302540.4362695/94‑1 (MQ=60)

                                                                    GTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAA                           >  SRR4302540.2210742/1‑94 (MQ=60)

                                                                    GTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAA                           >  SRR4302540.6399790/1‑94 (MQ=60)

                                                                    GTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAA                           >  SRR4302540.1008725/1‑94 (MQ=60)

                                                                      ACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACG                         <  SRR4302540.2876570/94‑1 (MQ=60)

                                                                      ACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACG                         >  SRR4302540.1421455/1‑94 (MQ=60)

                                                                      ACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACG                         <  SRR4302540.4967316/94‑1 (MQ=60)

                                                                       CGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGA                        >  SRR4302540.8251178/1‑94 (MQ=60)

                                                                       CGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGA                        >  SRR4302540.10019594/1‑94 (MQ=60)

                                                                        GGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGAC                       >  SRR4302540.4369140/1‑94 (MQ=60)

                                                                        GGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGAC                       <  SRR4302540.6856125/94‑1 (MQ=60)

                                                                        GGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGAC                       >  SRR4302540.2465158/1‑94 (MQ=60)

                                                                         GGTATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACG                      <  SRR4302540.2290368/94‑1 (MQ=60)

                                                                            atggtTAATATTCAAACCTCCGCAACCTGGAGCGCGAACACCAATTCACCTTTCTTCCCGTTTGACTCCTCGCAGATCATCTGGAACGACGCCC                   <  SRR4302540.182889/89‑1 (MQ=60)

                                                                            ATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCC                   >  SRR4302540.8420319/1‑94 (MQ=60)

                                                                            ATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCC                   <  SRR4302540.6484470/94‑1 (MQ=60)

                                                                            ATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCC                   <  SRR4302540.9191709/94‑1 (MQ=60)

                                                                            ATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCC                   >  SRR4302540.9449761/1‑94 (MQ=60)

                                                                            ATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCC                   >  SRR4302540.5403272/1‑94 (MQ=60)

                                                                            ATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCAAAAACCGATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCC                   <  SRR4302540.182888/94‑1 (MQ=60)

                                                                            ATGTGTAATATTCGAACCTCCGGAACCCGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCC                   >  SRR4302540.9887249/1‑94 (MQ=60)

                                                                             TGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCG                  >  SRR4302540.6155747/1‑94 (MQ=60)

                                                                              GTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGC                 >  SRR4302540.7489652/1‑94 (MQ=60)

                                                                               TGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCT                <  SRR4302540.10145759/94‑1 (MQ=60)

                                                                                GTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTC               >  SRR4302540.9706251/1‑94 (MQ=60)

                                                                                GTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTC               >  SRR4302540.8748533/1‑94 (MQ=60)

                                                                                 TAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCA              <  SRR4302540.7946433/94‑1 (MQ=60)

                                                                                 TAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCA              >  SRR4302540.87874/1‑94 (MQ=60)

                                                                                  AATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAT             <  SRR4302540.3103650/94‑1 (MQ=60)

                                                                                  AATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAT             <  SRR4302540.4625099/94‑1 (MQ=60)

                                                                                  AATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAT             <  SRR4302540.765407/94‑1 (MQ=60)

                                                                                   ATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATT            <  SRR4302540.531001/94‑1 (MQ=60)

                                                                                   ATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATT            <  SRR4302540.3412911/94‑1 (MQ=60)

                                                                                   ATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATT            <  SRR4302540.8390605/94‑1 (MQ=60)

                                                                                    TATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTG           <  SRR4302540.107688/94‑1 (MQ=60)

                                                                                      TTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCC         <  SRR4302540.3473296/94‑1 (MQ=60)

                                                                                        CGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAT       <  SRR4302540.608260/94‑1 (MQ=60)

                                                                                        CGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAT       <  SRR4302540.8455648/94‑1 (MQ=60)

                                                                                        CGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAT       >  SRR4302540.3827779/1‑94 (MQ=60)

                                                                                        CGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAT       >  SRR4302540.2910331/1‑94 (MQ=60)

                                                                                        CGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAT       <  SRR4302540.5591071/94‑1 (MQ=60)

                                                                                        CGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAT       <  SRR4302540.543715/94‑1 (MQ=60)

                                                                                        CGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAT       <  SRR4302540.1147659/94‑1 (MQ=60)

                                                                                        CGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGACCATCTGGAACGACGCCCGCTCATTGCCAT       >  SRR4302540.2242359/1‑94 (MQ=60)

                                                                                         GAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT      >  SRR4302540.8044263/1‑94 (MQ=60)

                                                                                         GAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT      >  SRR4302540.4216431/1‑94 (MQ=60)

                                                                                         GAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT      >  SRR4302540.5574741/1‑94 (MQ=60)

                                                                                         GAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT      <  SRR4302540.1360421/94‑1 (MQ=60)

                                                                                          AACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTA     >  SRR4302540.8977211/1‑94 (MQ=60)

                                                                                          AACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTA     <  SRR4302540.7217980/94‑1 (MQ=60)

                                                                                          AACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTA     >  SRR4302540.1913218/1‑94 (MQ=60)

                                                                                           ACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTAC    <  SRR4302540.3392523/94‑1 (MQ=60)

                                                                                           ACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTAC    >  SRR4302540.6239472/1‑94 (MQ=60)

                                                                                           ACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTAC    >  SRR4302540.3906111/1‑94 (MQ=60)

                                                                                            CCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACC   <  SRR4302540.8146640/94‑1 (MQ=60)

                                                                                            CCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACC   >  SRR4302540.1484266/1‑94 (MQ=60)

                                                                                             CTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCA  <  SRR4302540.6304206/94‑1 (MQ=60)

                                                                                             CTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCA  <  SRR4302540.4374939/94‑1 (MQ=60)

TGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCA  >  NC_000913/3525237‑3525423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`