Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,529,849	T→C	T77A (ACG→GCG)	yhgE ←	putative transport

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,529,849	0	T	C	99.2%	1505.0 / ‑2.9	472	T77A (ACG→GCG)	yhgE	putative transport
Reads supporting (aligned to +/- strand): ref base T (3/1); new base C (202/266); total (205/267)
Fisher's exact test for biased strand distribution p-value = 3.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 494 total aligned reads displayed.

GATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGTGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGG  >  NC_000913/3529759‑3529938

gATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCgg                                                                                         >  2:1915783/1‑93 (MQ=255)

gATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCgg                                                                                         >  1:5123917/1‑93 (MQ=255)

gATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCgg                                                                                         >  1:2094123/1‑93 (MQ=255)

  tAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCa                                                                                       >  1:6323794/1‑93 (MQ=255)

     cAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATa                                                                                    <  1:7764668/93‑1 (MQ=255)

      aaCCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATaa                                                                                   >  1:8883618/1‑93 (MQ=255)

      aaCCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATaa                                                                                   >  2:2991314/1‑93 (MQ=255)

      aaCCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATaa                                                                                   >  1:9429354/1‑93 (MQ=255)

      aaCCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGAGGCAGTaa                                                                                   >  2:6797922/1‑93 (MQ=255)

      aaCCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTACAGCCAGCCGCTCATCCCCAGCGCGGCAATaa                                                                                   <  2:4488802/93‑1 (MQ=255)

       aCCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATaaa                                                                                  <  1:8580890/93‑1 (MQ=255)

       aCCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATaaa                                                                                  <  2:3882282/93‑1 (MQ=255)

       aCCAAAACCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATaaa                                                                                  <  2:7276430/93‑1 (MQ=255)

        ccAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAac                                                                                 <  2:744679/93‑1 (MQ=255)

        ccAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAac                                                                                 <  2:7513446/93‑1 (MQ=255)

         cAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAaca                                                                                <  1:7668815/93‑1 (MQ=255)

         cAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAaca                                                                                >  1:7409752/1‑93 (MQ=255)

           aaaTCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACt                                                                              <  1:6958760/93‑1 (MQ=255)

           aaaTCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACt                                                                              >  1:2610731/1‑93 (MQ=255)

            aaTCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTa                                                                             <  2:4767915/93‑1 (MQ=255)

            aaTCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCAGCCCCAGCGCCGCAATACACACTa                                                                             >  2:1734097/1‑93 (MQ=255)

                ccAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAgcgc                                                                         <  2:1604795/93‑1 (MQ=255)

                ccAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAgcgc                                                                         >  1:4780846/1‑93 (MQ=255)

                 cAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgcc                                                                        <  1:4848110/93‑1 (MQ=255)

                 cAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgcc                                                                        >  1:7988265/1‑93 (MQ=255)

                     gcgcCTTTGCAGCGCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgccagcc                                                                    <  1:3992244/93‑1 (MQ=255)

                      cgcCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgccagcca                                                                   <  2:2587291/93‑1 (MQ=255)

                      cgcCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgccagcca                                                                   <  1:3608886/93‑1 (MQ=255)

                      cgcCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTCCAGCCAGCCGCTCCTCCCCAGCGCGCCAATAAACACTAGCgccagcca                                                                   <  2:8998720/93‑1 (MQ=255)

                       gcCTTTTCAGCTGTCCAGGGGTGCATGCCAGCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCAt                                                                  <  1:1401877/93‑1 (MQ=255)

                       gcCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCAt                                                                  <  1:8713987/93‑1 (MQ=255)

                        ccTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCTCCAGCGCGGCAATAAACACTAGCGCCAGCCATc                                                                 >  2:5155998/1‑93 (MQ=255)

                        ccTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGACAGCCATc                                                                 >  1:4200085/1‑93 (MQ=255)

                          ttttCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGCCATTAAACACTAGCCCCAGCCAcccc                                                               >  1:8134737/1‑93 (MQ=255)

                           tttCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATcccc                                                              >  1:5760733/1‑93 (MQ=255)

                           tttCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATcccc                                                              <  1:9239986/93‑1 (MQ=255)

                             tCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCaa                                                            >  2:8066555/1‑93 (MQ=255)

                             tCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCaa                                                            <  1:1135956/93‑1 (MQ=255)

                              cAGCTCTCCAGGGGTTCATGCCATCATTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCaaa                                                           <  1:3835674/93‑1 (MQ=255)

                               aGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAg                                                          <  1:8457943/93‑1 (MQ=255)

                                 ctctCCAGGGGTTCATGCCATCAGTTTGCCACTGCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGgc                                                        <  1:9701114/93‑1 (MQ=255)

                                  tctcCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGgcg                                                       >  2:133322/1‑93 (MQ=255)

                                   ctcCAGGGGTTCATGCCATCAGTTTGCCACTTCGGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGgcgc                                                      <  1:6489778/93‑1 (MQ=255)

                                    tcCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCt                                                     >  2:2838503/1‑93 (MQ=255)

                                      cAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTc                                                   >  2:417098/1‑93 (MQ=255)

                                      cAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTc                                                   <  2:1087440/93‑1 (MQ=255)

                                      cAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTc                                                   <  1:5472088/93‑1 (MQ=255)

                                      cAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATACCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTc                                                   >  1:4047865/1‑93 (MQ=255)

                                       aGGCGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCt                                                  <  2:5829762/93‑1 (MQ=255)

                                        ggggTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTg                                                 >  1:4551999/1‑93 (MQ=255)

                                           gTTCATGCCATCCGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGttt                                              >  1:6089324/1‑93 (MQ=255)

                                           gTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGttt                                              >  2:6960339/1‑93 (MQ=255)

                                            ttCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTa                                             >  1:6162946/1‑93 (MQ=255)

                                              cATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTaaa                                           >  1:4988911/1‑93 (MQ=255)

                                                tGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAag                                         <  2:2356616/93‑1 (MQ=255)

                                                 gCCATCAGTTTGCCAATTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGATTCTGTTTAAAaga                                        >  2:673941/1‑93 (MQ=255)

                                                  ccATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAagag                                       >  1:7554481/1‑93 (MQ=255)

                                                  ccATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAagag                                       <  1:4304725/93‑1 (MQ=255)

                                                    aTCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGAt                                     >  2:2733022/1‑93 (MQ=255)

                                                    aTCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAACAGAt                                     <  2:4050172/93‑1 (MQ=255)

                                                      cAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCa                                   <  1:2443998/93‑1 (MQ=255)

                                                       aGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCAc                                  <  2:3585368/93‑1 (MQ=255)

                                                        gTTTGCCACTTCAGCCAGCCGCTCATCCCTAGCGCGGCAATAAACACTAGCGCAAGCCATCCCCAAAGGCGCTACTGTTTAAAAGAGATCACg                                 <  1:9653855/93‑1 (MQ=255)

                                                        gTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACg                                 <  2:9338763/93‑1 (MQ=255)

                                                        gTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACg                                 <  1:6262659/93‑1 (MQ=255)

                                                        gTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACg                                 <  1:3060785/93‑1 (MQ=255)

                                                         tttCCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACgg                                <  2:7847276/93‑1 (MQ=255)

                                                          ttGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGga                               <  2:653141/93‑1 (MQ=255)

                                                          ttGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGga                               <  2:3749768/93‑1 (MQ=255)

                                                             ccACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGagaa                            <  1:9987904/93‑1 (MQ=255)

                                                              cACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGagaag                           >  2:5411697/1‑93 (MQ=255)

                                                               aCTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGagaaga                          >  2:9604524/1‑93 (MQ=255)

                                                                  tCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTa                       <  1:6636082/93‑1 (MQ=255)

                                                                     gccagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTaaaa                    <  1:10007505/93‑1 (MQ=255)

                                                                     gccagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTaaaa                    >  1:5629513/1‑93 (MQ=255)

                                                                     gccagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTaaaa                    >  1:1725309/1‑93 (MQ=255)

                                                                     gccagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTaaaa                    <  1:9064996/93‑1 (MQ=255)

                                                                     gccagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGAaaaa                    >  2:8632028/1‑93 (MQ=255)

                                                                      ccagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAAc                   <  2:6098719/93‑1 (MQ=255)

                                                                       cagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACg                  >  2:8573365/1‑93 (MQ=255)

                                                                       cagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACg                  <  2:2146140/93‑1 (MQ=255)

                                                                       cagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATACCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGAAAAACg                  >  1:5286307/1‑93 (MQ=255)

                                                                        agccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACgg                 <  2:3241212/93‑1 (MQ=255)

                                                                         gccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGa                <  2:3383067/93‑1 (MQ=255)

                                                                         gccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGa                >  2:9813667/1‑93 (MQ=255)

                                                                         gccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGa                >  2:144168/1‑93 (MQ=255)

                                                                         gccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGa                <  2:4927880/93‑1 (MQ=255)

                                                                         gccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGCAAAACGGa                >  1:1262522/1‑93 (MQ=255)

                                                                         gccGCGCATCCCCAGCGCGGCAATAAACACTAGCAACAGCCATCCCCAAAGGCGCTCCTGTTTAAAAAAGATCACGGAGAAGAGTAAAACGGa                <  1:1600139/93‑1 (MQ=255)

                                                                             cTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGaa            >  2:8549094/1‑93 (MQ=255)

                                                                              tCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGaaa           >  2:6325275/1‑93 (MQ=255)

                                                                               cagccccAACGCGTCAATAAACCCTAGCGCCAGCCACCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGaaaa          <  1:2263208/90‑1 (MQ=255)

                                                                               cATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGaaaa          <  1:4680609/93‑1 (MQ=255)

                                                                               cATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGaaaa          <  1:2819081/93‑1 (MQ=255)

                                                                               cATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGaaaa          <  1:7250427/93‑1 (MQ=255)

                                                                                aTCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAc         >  1:3470058/1‑93 (MQ=255)

                                                                                   cccAGCGTGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAcgcg      >  1:5932977/1‑93 (MQ=255)

                                                                                       gcgcGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACgg  <  2:8219765/93‑1 (MQ=255)

                                                                                       gcgcGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACgg  >  1:288040/1‑93 (MQ=255)

                                                                                       gcgcGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACgg  <  2:9240450/93‑1 (MQ=255)

GATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGTGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGG  >  NC_000913/3529759‑3529938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 281 total aligned reads displayed.

GCAGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGTGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGGTCG  >  NC_000913/3529756‑3529941

GCAGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGC                                                                                              <  SRR4302540.2454555/94‑1 (MQ=60)

GCAGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGC                                                                                              >  SRR4302540.4066789/1‑94 (MQ=60)

GCAGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGC                                                                                              <  SRR4302540.7267977/94‑1 (MQ=60)

GCAGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGC                                                                                              >  SRR4302540.10009232/1‑94 (MQ=60)

 CAGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCAATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCG                                                                                             >  SRR4302540.3863456/1‑94 (MQ=60)

  AGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGG                                                                                            >  SRR4302540.2116611/1‑94 (MQ=60)

  AGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGG                                                                                            >  SRR4302540.6969091/1‑94 (MQ=60)

  AGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGG                                                                                            >  SRR4302540.6337860/1‑94 (MQ=60)

  AGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGG                                                                                            >  SRR4302540.5179411/1‑94 (MQ=60)

    ATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCA                                                                                          >  SRR4302540.4205288/1‑94 (MQ=60)

    ATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCA                                                                                          >  SRR4302540.6394218/1‑94 (MQ=60)

      AGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTACCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAAT                                                                                        >  SRR4302540.8580519/1‑94 (MQ=60)

        CAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAA                                                                                      >  SRR4302540.8986439/1‑94 (MQ=60)

        CAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAA                                                                                      >  SRR4302540.9541377/1‑94 (MQ=60)

         AACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAA                                                                                     >  SRR4302540.95547/1‑94 (MQ=60)

          ACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAAC                                                                                    <  SRR4302540.8680639/94‑1 (MQ=60)

          ACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAAC                                                                                    <  SRR4302540.5476644/94‑1 (MQ=60)

           CCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACA                                                                                   >  SRR4302540.7879948/1‑94 (MQ=60)

           CCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACA                                                                                   >  SRR4302540.7492287/1‑94 (MQ=60)

            CAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACAC                                                                                  <  SRR4302540.7755245/94‑1 (MQ=60)

            CAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACAC                                                                                  <  SRR4302540.9001286/94‑1 (MQ=60)

            CAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACAC                                                                                  <  SRR4302540.4207549/94‑1 (MQ=60)

            CAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACAC                                                                                  >  SRR4302540.5320964/1‑94 (MQ=60)

            CAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACAC                                                                                  <  SRR4302540.709875/94‑1 (MQ=60)

             AAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACT                                                                                 <  SRR4302540.10013079/94‑1 (MQ=60)

             AAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACT                                                                                 >  SRR4302540.2638913/1‑94 (MQ=60)

             AAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACT                                                                                 >  SRR4302540.7968729/1‑94 (MQ=60)

             AAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACT                                                                                 <  SRR4302540.1786054/94‑1 (MQ=60)

             AAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACT                                                                                 >  SRR4302540.10098549/1‑94 (MQ=60)

              AAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTA                                                                                <  SRR4302540.7036174/94‑1 (MQ=60)

              AAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTA                                                                                >  SRR4302540.807189/1‑94 (MQ=60)

              AAACCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTA                                                                                <  SRR4302540.2335668/94‑1 (MQ=60)

               AATCCCAAAGCGCGTTTTCAGCTCCCCAGGGGCTGACGTCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAG                                                                               <  SRR4302540.1085949/94‑1 (MQ=60)

               AATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAG                                                                               <  SRR4302540.1085603/94‑1 (MQ=60)

               AATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAG                                                                               >  SRR4302540.9608999/1‑94 (MQ=60)

                ATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGC                                                                              >  SRR4302540.8431166/1‑94 (MQ=60)

                ATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGC                                                                              <  SRR4302540.4793167/94‑1 (MQ=60)

                 TCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCG                                                                             <  SRR4302540.10113413/94‑1 (MQ=60)

                  CCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGC                                                                            >  SRR4302540.5905995/1‑94 (MQ=60)

                  CCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGC                                                                            >  SRR4302540.4831941/1‑94 (MQ=60)

                   CCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCC                                                                           >  SRR4302540.626037/1‑94 (MQ=60)

                   CCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCC                                                                           >  SRR4302540.5643450/1‑94 (MQ=60)

                   CCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCC                                                                           <  SRR4302540.5214197/94‑1 (MQ=60)

                   CCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCC                                                                           >  SRR4302540.8795181/1‑94 (MQ=60)

                    CAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCA                                                                          >  SRR4302540.5177051/1‑94 (MQ=60)

                    CAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCA                                                                          <  SRR4302540.4900050/94‑1 (MQ=60)

                     AAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAG                                                                         <  SRR4302540.8147440/94‑1 (MQ=60)

                     AAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCACCCAGCCGCTCATCCCCCGCGCGGCAATAAACACTAGCGCCAC                                                                         >  SRR4302540.4270347/1‑94 (MQ=60)

                       AGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCC                                                                       <  SRR4302540.7697584/94‑1 (MQ=60)

                        GCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCA                                                                      <  SRR4302540.507125/94‑1 (MQ=60)

                        GCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCA                                                                      <  SRR4302540.6195040/94‑1 (MQ=60)

                        GCGCCTTTGCAGCGCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCA                                                                      <  SRR4302540.4035209/94‑1 (MQ=60)

                         CGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCAT                                                                     <  SRR4302540.156583/94‑1 (MQ=60)

                         CGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCAT                                                                     <  SRR4302540.3648326/94‑1 (MQ=60)

                          GCCTTTTCAGCTGTCCAGGGGTGCATGCCAGCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATC                                                                    <  SRR4302540.1416959/94‑1 (MQ=60)

                          GCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATC                                                                    <  SRR4302540.738786/94‑1 (MQ=60)

                          GCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATC                                                                    <  SRR4302540.1416958/94‑1 (MQ=60)

                          GCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGACAGCCATC                                                                    >  SRR4302540.4245781/1‑94 (MQ=60)

                          GCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCCCGGCAATAAACACTAGCGCCAGCCATC                                                                    >  SRR4302540.7727057/1‑94 (MQ=60)

                            CTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCC                                                                  >  SRR4302540.5079689/1‑94 (MQ=60)

                            CTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCC                                                                  <  SRR4302540.6250955/94‑1 (MQ=60)

                            CTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCC                                                                  >  SRR4302540.4838707/1‑94 (MQ=60)

                            CTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGCCATTAAACACTAGCCCCAGCCACCCC                                                                  >  SRR4302540.8229151/1‑94 (MQ=60)

                             TTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCC                                                                 >  SRR4302540.5824336/1‑94 (MQ=60)

                              TTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCA                                                                <  SRR4302540.9350668/94‑1 (MQ=60)

                                TCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAA                                                              <  SRR4302540.9769902/94‑1 (MQ=60)

                                TCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAA                                                              <  SRR4302540.1147799/94‑1 (MQ=60)

                                 CAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAG                                                             <  SRR4302540.6452616/94‑1 (MQ=60)

                                 CAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAG                                                             <  SRR4302540.5952496/94‑1 (MQ=60)

                                 CAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAG                                                             <  SRR4302540.9773105/94‑1 (MQ=60)

                                 CAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAG                                                             <  SRR4302540.333100/94‑1 (MQ=60)

                                  AGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGG                                                            <  SRR4302540.2732936/94‑1 (MQ=60)

                                  AGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGG                                                            <  SRR4302540.5368027/94‑1 (MQ=60)

                                   GCTCTCCAGGGGTCCATCCCACCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGC                                                           <  SRR4302540.2093282/94‑1 (MQ=60)

                                    CTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGTGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCG                                                          >  SRR4302540.4462879/1‑94 (MQ=60)

                                    CTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCG                                                          >  SRR4302540.4640098/1‑94 (MQ=60)

                                    CTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCG                                                          >  SRR4302540.2335691/1‑94 (MQ=60)

                                    CTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCG                                                          >  SRR4302540.6339335/1‑94 (MQ=60)

                                    CTCTCCAGGGGTTCATGCCATCAGTTTGCCACTGCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCG                                                          <  SRR4302540.9815167/94‑1 (MQ=60)

                                     TCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCACCCATCCCCAAAGGCGC                                                         >  SRR4302540.6622586/1‑94 (MQ=60)

                                     TCTCCAGGGGTTCATGCCATCAGTGTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGC                                                         <  SRR4302540.4065974/94‑1 (MQ=60)

                                      CTCCAGGGGTTCATGCCATCAGTTTGCCACTTCGGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCT                                                        <  SRR4302540.6561948/94‑1 (MQ=60)

                                      CTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCT                                                        >  SRR4302540.6709499/1‑94 (MQ=60)

                                      CTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGCCGCT                                                        >  SRR4302540.2830590/1‑94 (MQ=60)

                                       TCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTT                                                       <  SRR4302540.8650838/94‑1 (MQ=60)

                                       TCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTT                                                       >  SRR4302540.259946/1‑94 (MQ=60)

                                        CCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATACCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTC                                                      >  SRR4302540.4091509/1‑94 (MQ=60)

                                         CAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCT                                                     <  SRR4302540.5532325/94‑1 (MQ=60)

                                         CAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCT                                                     <  SRR4302540.5419349/94‑1 (MQ=60)

                                         CAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCT                                                     >  SRR4302540.5772439/1‑94 (MQ=60)

                                         CAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCT                                                     <  SRR4302540.7770025/94‑1 (MQ=60)

                                         CAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCT                                                     <  SRR4302540.7770023/94‑1 (MQ=60)

                                          AGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTG                                                    <  SRR4302540.781923/94‑1 (MQ=60)

                                          AGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTG                                                    <  SRR4302540.9337638/94‑1 (MQ=60)

                                          AGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTG                                                    >  SRR4302540.4601224/1‑94 (MQ=60)

                                           GGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGT                                                   <  SRR4302540.3520937/94‑1 (MQ=60)

                                           GGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGT                                                   <  SRR4302540.1643738/94‑1 (MQ=60)

                                            GGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCCATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTT                                                  >  SRR4302540.1388789/1‑94 (MQ=60)

                                            GGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTT                                                  <  SRR4302540.3164931/94‑1 (MQ=60)

                                             GGTTCATGCCATCCGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTT                                                 >  SRR4302540.6157092/1‑94 (MQ=60)

                                             GGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTT                                                 <  SRR4302540.9610003/94‑1 (MQ=60)

                                             GGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTT                                                 <  SRR4302540.125235/94‑1 (MQ=60)

                                             GGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCGTCTGTTT                                                 >  SRR4302540.6157093/1‑94 (MQ=60)

                                              GTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTA                                                >  SRR4302540.8686157/1‑94 (MQ=60)

                                              GTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTA                                                >  SRR4302540.6231620/1‑94 (MQ=60)

                                              GTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTA                                                >  SRR4302540.8067718/1‑94 (MQ=60)

                                              GTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGCTTA                                                >  SRR4302540.6231619/1‑94 (MQ=60)

                                              GTGCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTA                                                <  SRR4302540.4754852/94‑1 (MQ=60)

                                                TCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAA                                              >  SRR4302540.5042925/1‑94 (MQ=60)

                                                TCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAA                                              >  SRR4302540.481359/1‑94 (MQ=60)

                                                  ATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAG                                            <  SRR4302540.3231225/94‑1 (MQ=60)

                                                  ATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAG                                            >  SRR4302540.4689836/1‑94 (MQ=60)

                                                  ATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAG                                            >  SRR4302540.1454612/1‑94 (MQ=60)

                                                   TGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGA                                           >  SRR4302540.2854946/1‑94 (MQ=60)

                                                   TGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGA                                           <  SRR4302540.5007318/94‑1 (MQ=60)

                                                   TGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGA                                           >  SRR4302540.553216/1‑94 (MQ=60)

                                                    GCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAG                                          >  SRR4302540.7639192/1‑94 (MQ=60)

                                                     CCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGA                                         <  SRR4302540.7137428/94‑1 (MQ=60)

                                                      CATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGAT                                        <  SRR4302540.4871860/94‑1 (MQ=60)

                                                      CATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGAT                                        >  SRR4302540.2433589/1‑94 (MQ=60)

                                                       ATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATC                                       <  SRR4302540.6765950/94‑1 (MQ=60)

                                                       ATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATC                                       <  SRR4302540.614162/94‑1 (MQ=60)

                                                       ATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATC                                       <  SRR4302540.1470801/94‑1 (MQ=60)

                                                        TCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCA                                      <  SRR4302540.5256950/94‑1 (MQ=60)

                                                        TCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCA                                      <  SRR4302540.7557337/94‑1 (MQ=60)

                                                        TCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCA                                      <  SRR4302540.8294133/94‑1 (MQ=60)

                                                        TCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCA                                      >  SRR4302540.9121416/1‑94 (MQ=60)

                                                         CAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGTGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCAC                                     <  SRR4302540.9384992/94‑1 (MQ=60)

                                                         CAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCAC                                     <  SRR4302540.5992166/94‑1 (MQ=60)

                                                         CAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCAC                                     <  SRR4302540.1682953/94‑1 (MQ=60)

                                                         CAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCAC                                     <  SRR4302540.2470320/94‑1 (MQ=60)

                                                           GTTTGCCACTTCAGCCAGCCGCTCATCCCTAGCGCGGCAATAAACACTAGCGCAAGCCATCCCCAAAGGCGCTACTGTTTAAAAGAGATCACGG                                   <  SRR4302540.9767515/94‑1 (MQ=60)

                                                           GTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGG                                   <  SRR4302540.6332335/94‑1 (MQ=60)

                                                           GTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGG                                   <  SRR4302540.9262322/94‑1 (MQ=60)

                                                             TTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAG                                 <  SRR4302540.1715326/94‑1 (MQ=60)

                                                              TGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGA                                >  SRR4302540.9830058/1‑94 (MQ=60)

                                                               GCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAAATCACGGAGAA                               <  SRR4302540.9085917/94‑1 (MQ=60)

                                                                CCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAG                              <  SRR4302540.734129/94‑1 (MQ=60)

                                                                CCACTTCAGCCAGCCGCTCATCCCCAGCCCGGCAATAAACACTAGCACCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAG                              <  SRR4302540.2209590/94‑1 (MQ=60)

                                                                 CACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGA                             <  SRR4302540.2491969/94‑1 (MQ=60)

                                                                 CACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCCCCACCCATCCCCAAAGGCACTTCTGTTTAAAAGAaaccccggagcaaa                             >  SRR4302540.2941502/1‑80 (MQ=60)

                                                                  ACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAG                            >  SRR4302540.7546512/1‑94 (MQ=60)

                                                                  ACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAG                            <  SRR4302540.8143827/94‑1 (MQ=60)

                                                                   CTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGT                           >  SRR4302540.4351993/1‑94 (MQ=60)

                                                                     TCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAA                         <  SRR4302540.8784143/94‑1 (MQ=60)

                                                                     TCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAA                         <  SRR4302540.6709520/94‑1 (MQ=60)

                                                                       AGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAA                       >  SRR4302540.1987165/1‑94 (MQ=60)

                                                                       AGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAA                       >  SRR4302540.6117715/1‑94 (MQ=60)

                                                                        GCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAAC                      <  SRR4302540.10124055/94‑1 (MQ=60)

                                                                        GCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAAC                      <  SRR4302540.9173839/94‑1 (MQ=60)

                                                                        GCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAAC                      <  SRR4302540.1462515/94‑1 (MQ=60)

                                                                        GCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAAC                      <  SRR4302540.8216859/94‑1 (MQ=60)

                                                                         CCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACG                     <  SRR4302540.8875171/94‑1 (MQ=60)

                                                                         CCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACG                     <  SRR4302540.7383110/94‑1 (MQ=60)

                                                                          CAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGG                    >  SRR4302540.3883397/1‑94 (MQ=60)

                                                                          CAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGG                    >  SRR4302540.2825573/1‑94 (MQ=60)

                                                                           AGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGA                   >  SRR4302540.4842296/1‑94 (MQ=60)

                                                                           AGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGA                   <  SRR4302540.3908194/94‑1 (MQ=60)

                                                                           AGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGA                   <  SRR4302540.1170468/94‑1 (MQ=60)

                                                                           AGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGA                   <  SRR4302540.2856466/94‑1 (MQ=60)

                                                                           AGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGA                   >  SRR4302540.1275493/1‑94 (MQ=60)

                                                                           AGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGA                   <  SRR4302540.5756688/94‑1 (MQ=60)

                                                                           AGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGCAAAACGGA                   >  SRR4302540.1275485/1‑94 (MQ=60)

                                                                            GCCGCGCATCCCCAGCGCGGCAATAAACACTAGCAACAGCCATCCCCAAAGGCGCTCCTGTTTAAAAAAGATCACGGAGAAGAGTAAAACGGAT                  <  SRR4302540.1617640/94‑1 (MQ=60)

                                                                              CGCTCATCGCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGA                <  SRR4302540.4997907/94‑1 (MQ=60)

                                                                              CGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGA                >  SRR4302540.8675936/1‑94 (MQ=60)

                                                                               GCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAA               >  SRR4302540.6559852/1‑94 (MQ=60)

                                                                               GCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAA               <  SRR4302540.4078603/94‑1 (MQ=60)

                                                                                CTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGGAA              >  SRR4302540.3701939/1‑94 (MQ=60)

                                                                                  CATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAC            <  SRR4302540.7331330/94‑1 (MQ=60)

                                                                                  CATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAC            >  SRR4302540.3507837/1‑94 (MQ=60)

                                                                                  CATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAC            <  SRR4302540.5699362/94‑1 (MQ=60)

                                                                                  CATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAC            <  SRR4302540.6809094/94‑1 (MQ=60)

                                                                                  CATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAC            <  SRR4302540.4730682/94‑1 (MQ=60)

                                                                                  CATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAC            <  SRR4302540.4275374/94‑1 (MQ=60)

                                                                                   ATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACG           >  SRR4302540.3695109/1‑94 (MQ=60)

                                                                                   ATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACG           >  SRR4302540.388273/1‑94 (MQ=60)

                                                                                   ATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATAAAACCG           >  SRR4302540.3025350/1‑94 (MQ=60)

                                                                                     CCCCAGCGTGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCG         >  SRR4302540.5998546/1‑94 (MQ=60)

                                                                                     CCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCG         <  SRR4302540.9442863/94‑1 (MQ=60)

                                                                                      CCCGGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGA        <  SRR4302540.2918523/94‑1 (MQ=60)

                                                                                      CCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGTGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGA        <  SRR4302540.2241229/94‑1 (MQ=60)

                                                                                      CCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGA        <  SRR4302540.7749063/94‑1 (MQ=60)

                                                                                      CCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGA        <  SRR4302540.2858789/94‑1 (MQ=60)

                                                                                      CCCAGCGCGGCAATAAACACTAGCGCCAGCCACCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGA        >  SRR4302540.8930339/1‑94 (MQ=60)

                                                                                       CCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGAC       >  SRR4302540.4251620/1‑94 (MQ=60)

                                                                                       CCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGAC       >  SRR4302540.3873929/1‑94 (MQ=60)

                                                                                       CCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGAC       <  SRR4302540.6545814/94‑1 (MQ=60)

                                                                                       CCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGAC       >  SRR4302540.3614329/1‑94 (MQ=60)

                                                                                       CCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGAC       >  SRR4302540.3067210/1‑94 (MQ=60)

                                                                                       CCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGAC       >  SRR4302540.8322651/1‑94 (MQ=60)

                                                                                        CAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACG      <  SRR4302540.5606064/94‑1 (MQ=60)

                                                                                         AGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGG     >  SRR4302540.290883/1‑94 (MQ=60)

                                                                                          GCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGGT    >  SRR4302540.2202616/1‑94 (MQ=60)

                                                                                          GCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGGT    <  SRR4302540.8865755/94‑1 (MQ=60)

                                                                                           CGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGGTC   <  SRR4302540.8139185/94‑1 (MQ=60)

                                                                                           CGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGGTC   <  SRR4302540.4313261/94‑1 (MQ=60)

                                                                                            GCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGGTCG  <  SRR4302540.1756819/94‑1 (MQ=60)

                                                                                            GCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGGTCG  <  SRR4302540.3799918/94‑1 (MQ=60)

                                                                                            GCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGGTCG  >  SRR4302540.4479221/1‑94 (MQ=60)

GCAGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGTGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGGTCG  >  NC_000913/3529756‑3529941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`