Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,529,849 |
T→C |
T77A (ACG→GCG) |
yhgE ← |
putative transport |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,529,849 | 0 | T | C | 100.0%
| 779.7
/ NA
| 241 | T77A (ACG→GCG) | yhgE | putative transport |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (119/122); total (119/122) |
Only 100 of 256 total aligned reads displayed.
GATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGTGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGG > NC_000913/3529759‑3529938
|
gATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCgg > 2:2730710/1‑93 (MQ=255)
aCCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCGCTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATaaa > 1:1511699/1‑93 (MQ=255)
aCCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATaaa < 2:3586843/93‑1 (MQ=255)
ccAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCGGCTCATCCCCAGCGCGGCAATAAac < 1:3593095/93‑1 (MQ=255)
ccAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAac > 1:1729140/1‑93 (MQ=255)
ccAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAac < 1:601948/93‑1 (MQ=255)
cAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAaca < 1:4336334/93‑1 (MQ=255)
aaaaTCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAacac < 2:3909707/93‑1 (MQ=255)
aaTCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTa > 1:3840907/1‑93 (MQ=255)
aTCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAg < 1:4373154/93‑1 (MQ=255)
aTCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAg < 1:6275288/93‑1 (MQ=255)
tCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAgc < 1:5620081/93‑1 (MQ=255)
ccAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAgcgc > 1:1346546/1‑93 (MQ=255)
cAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgcc < 1:2118529/93‑1 (MQ=255)
aaaGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgcca < 2:4023501/93‑1 (MQ=255)
aaGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgccag < 2:4823877/93‑1 (MQ=255)
aaGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgccag > 1:567400/1‑93 (MQ=255)
aaGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgccag > 2:3565720/1‑93 (MQ=255)
aGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgccagc > 2:1933677/1‑93 (MQ=255)
gcgcCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgccagcc < 2:5558840/93‑1 (MQ=255)
gcgcCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgccagcc < 2:2221995/93‑1 (MQ=255)
gcgcCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgccagcc < 2:649287/93‑1 (MQ=255)
cgcCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCgccagcca < 1:4428265/93‑1 (MQ=255)
gcCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCAt > 2:5253404/1‑93 (MQ=255)
gcCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCAt > 1:2344247/1‑93 (MQ=255)
ttttCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATccc > 1:1543270/1‑93 (MQ=255)
aGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAg < 2:2477506/93‑1 (MQ=255)
aGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAg < 2:1888975/93‑1 (MQ=255)
aGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAg < 2:1496048/93‑1 (MQ=255)
gCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCTCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAgg > 1:2612487/1‑93 (MQ=255)
tctcCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGgcg > 2:2867740/1‑93 (MQ=255)
ctcCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGgcgc > 2:5271194/1‑93 (MQ=255)
tcCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCt < 1:4623242/93‑1 (MQ=255)
tcCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCt < 2:736222/93‑1 (MQ=255)
ccAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCtt > 2:81262/1‑93 (MQ=255)
ccAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCtt < 1:2842059/93‑1 (MQ=255)
cAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTc < 1:4193008/93‑1 (MQ=255)
cAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGAGCTTc > 1:5801891/1‑93 (MQ=255)
ggggTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTg > 1:5380541/1‑93 (MQ=255)
gggTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGGCATCCCCAAAGGCGCTTCTGt > 2:1000836/1‑93 (MQ=255)
gggTTCATCCCATAAGTTTCCCACTTCAGCCAGCCGCTCATCCTCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGt < 2:3286909/93‑1 (MQ=255)
ggTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGtt < 2:4346871/93‑1 (MQ=255)
ttCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTa > 2:2034066/1‑93 (MQ=255)
ttCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTa > 1:5271586/1‑93 (MQ=255)
tCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTaa < 1:2794451/93‑1 (MQ=255)
cATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTaaa < 1:1927244/93‑1 (MQ=255)
aTGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTaaaa < 2:5692828/93‑1 (MQ=255)
tGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAag > 1:2468260/1‑93 (MQ=255)
gCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAaga < 2:5423603/93‑1 (MQ=255)
ccATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACGCTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAagag < 1:1892313/93‑1 (MQ=255)
ccATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAagag < 1:4063840/93‑1 (MQ=255)
ccATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAagag > 2:371661/1‑93 (MQ=255)
cATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAgaga < 2:932627/93‑1 (MQ=255)
cATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAgaga > 1:5542257/1‑93 (MQ=255)
aTCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGAt < 2:2971339/93‑1 (MQ=255)
tCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATc < 1:3618983/93‑1 (MQ=255)
aGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCAc < 1:803128/93‑1 (MQ=255)
gTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACg > 1:4136516/1‑93 (MQ=255)
gTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACg > 2:3267207/1‑93 (MQ=255)
gTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACg > 2:4123227/1‑93 (MQ=255)
tttGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACgg > 2:427322/1‑93 (MQ=255)
tttGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACgg < 1:1374779/93‑1 (MQ=255)
ttGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGga < 2:5592672/93‑1 (MQ=255)
ccACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGagaa < 1:1033200/93‑1 (MQ=255)
aCTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGCTCACGGagaaga > 2:6185067/1‑93 (MQ=255)
aCTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGagaaga < 1:4920909/93‑1 (MQ=255)
cTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAagag < 2:3137487/93‑1 (MQ=255)
ttCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAagaga > 2:3194936/1‑92 (MQ=255)
ttCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGt > 2:4446739/1‑93 (MQ=255)
ttCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGt > 1:4168828/1‑93 (MQ=255)
ttCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGt < 1:5432324/93‑1 (MQ=255)
tCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTa < 1:2979791/93‑1 (MQ=255)
tCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTa < 2:5841105/93‑1 (MQ=255)
tCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTa > 1:198125/1‑93 (MQ=255)
agccagccGCTCATCCCCAGCGCGGCAATAAACCCTAGCGCCAGCCATCCCC‑AAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTaaaa < 1:6184433/93‑1 (MQ=255)
gccagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTaaaa > 2:450167/1‑93 (MQ=255)
ccagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAAc < 2:5593622/93‑1 (MQ=255)
ccagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAAc < 1:3288804/93‑1 (MQ=255)
cagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACg > 2:4417161/1‑93 (MQ=255)
cagccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACg < 1:4721578/93‑1 (MQ=255)
agccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACgg > 2:1542252/1‑93 (MQ=255)
agccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACgg > 1:4580242/1‑93 (MQ=255)
gccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGa > 1:3348467/1‑93 (MQ=255)
gccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGa < 1:311793/93‑1 (MQ=255)
ccGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGCCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGAt < 1:3389048/93‑1 (MQ=255)
gCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGa > 1:1121893/1‑93 (MQ=255)
gCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGa < 2:4722380/93‑1 (MQ=255)
cTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGaa > 2:6277042/1‑93 (MQ=255)
tCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGGAGAGTAAAACGGATGaaa > 2:4978555/1‑93 (MQ=255)
tCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGaaa > 2:4613236/1‑93 (MQ=255)
tCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGaaa > 2:1774576/1‑93 (MQ=255)
cATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGaaaa > 2:4177333/1‑93 (MQ=255)
cATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGaaaa < 2:3076701/93‑1 (MQ=255)
aTCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAc > 1:2547639/1‑93 (MQ=255)
aTCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAc < 2:1193621/93‑1 (MQ=255)
ccccAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAcgc < 2:161735/93‑1 (MQ=255)
cccAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAcgcg < 1:4507477/93‑1 (MQ=255)
cAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGAc < 1:3940959/93‑1 (MQ=255)
cAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGAc < 1:5101615/93‑1 (MQ=255)
gcgcGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACgg > 2:3473394/1‑93 (MQ=255)
|
GATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGTGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGG > NC_000913/3529759‑3529938
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCAGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGTGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGGTCG > NC_000913/3529756‑3529941
|
GCAGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGC < SRR4302533.1838600/94‑1 (MQ=60)
AGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGG > SRR4302533.1380073/1‑94 (MQ=60)
GATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGC > SRR4302533.5337860/1‑94 (MQ=60)
ATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCA > SRR4302533.2515401/1‑94 (MQ=60)
GCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATA < SRR4302533.979236/94‑1 (MQ=60)
CAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAA < SRR4302533.1547827/94‑1 (MQ=60)
CAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAA > SRR4302533.4419001/1‑94 (MQ=60)
AACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCGCTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAA > SRR4302533.1520810/1‑94 (MQ=60)
AACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAA > SRR4302533.4192805/1‑94 (MQ=60)
ACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAAC > SRR4302533.1739625/1‑94 (MQ=60)
CCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCGGCTCATCCCCAGCGCGGCAATAAACA < SRR4302533.3615207/94‑1 (MQ=60)
CCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACA < SRR4302533.5460191/94‑1 (MQ=60)
CCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACA < SRR4302533.605487/94‑1 (MQ=60)
CAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACAC < SRR4302533.4362466/94‑1 (MQ=60)
CAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACAC < SRR4302533.454187/94‑1 (MQ=60)
CAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACAC < SRR4302533.4158488/94‑1 (MQ=60)
AAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTA < SRR4302533.1959994/94‑1 (MQ=60)
AAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTA > SRR4302533.3864371/1‑94 (MQ=60)
ATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGC < SRR4302533.838034/94‑1 (MQ=60)
ATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGC < SRR4302533.6312762/94‑1 (MQ=60)
ATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGC < SRR4302533.4399553/94‑1 (MQ=60)
ATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGC < SRR4302533.5578157/94‑1 (MQ=60)
TCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCG < SRR4302533.5654048/94‑1 (MQ=60)
TCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCG > SRR4302533.2634937/1‑94 (MQ=60)
CCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGC > SRR4302533.1354648/1‑94 (MQ=60)
CAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCA < SRR4302533.2131595/94‑1 (MQ=60)
CAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCA > SRR4302533.5850036/1‑94 (MQ=60)
CAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCA > SRR4302533.6269246/1‑94 (MQ=60)
CAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGACA > SRR4302533.2613473/1‑94 (MQ=60)
AAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAG < SRR4302533.3202396/94‑1 (MQ=60)
AAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAG < SRR4302533.3381752/94‑1 (MQ=60)
AAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAG > SRR4302533.3615547/1‑94 (MQ=60)
AAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAG > SRR4302533.3879233/1‑94 (MQ=60)
AAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAG > SRR4302533.570758/1‑94 (MQ=60)
AAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGC > SRR4302533.4710181/1‑94 (MQ=60)
GCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCA > SRR4302533.712911/1‑94 (MQ=60)
GCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCA > SRR4302533.3317800/1‑94 (MQ=60)
CGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCAT > SRR4302533.2358756/1‑94 (MQ=60)
CGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCAT < SRR4302533.4455034/94‑1 (MQ=60)
GCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATC > SRR4302533.4550795/1‑94 (MQ=60)
CTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCC > SRR4302533.1552564/1‑94 (MQ=60)
CTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCC > SRR4302533.5808005/1‑94 (MQ=60)
CTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCC > SRR4302533.1943692/1‑94 (MQ=60)
TTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCC < SRR4302533.2834403/94‑1 (MQ=60)
TTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCA < SRR4302533.2947444/94‑1 (MQ=60)
TCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAA < SRR4302533.2532477/94‑1 (MQ=60)
TCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAA < SRR4302533.5630259/94‑1 (MQ=60)
CAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAG < SRR4302533.5199441/94‑1 (MQ=60)
AGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCTCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGG > SRR4302533.2628522/1‑94 (MQ=60)
AGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGG > SRR4302533.4745692/1‑94 (MQ=60)
GCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGC < SRR4302533.5824393/94‑1 (MQ=60)
TCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGC > SRR4302533.4213559/1‑94 (MQ=60)
TCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTT < SRR4302533.4651266/94‑1 (MQ=60)
TCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTT > SRR4302533.2736527/1‑94 (MQ=60)
CCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTC < SRR4302533.2859552/94‑1 (MQ=60)
CCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTC > SRR4302533.3714430/1‑94 (MQ=60)
CCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGAGCTTC > SRR4302533.5836938/1‑94 (MQ=60)
CAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCT < SRR4302533.4218386/94‑1 (MQ=60)
AGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTG > SRR4302533.5412866/1‑94 (MQ=60)
AGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTG > SRR4302533.3739514/1‑94 (MQ=60)
AGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTG > SRR4302533.46381/1‑94 (MQ=60)
GGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGT < SRR4302533.4141225/94‑1 (MQ=60)
GGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGT > SRR4302533.6188902/1‑94 (MQ=60)
GGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGT < SRR4302533.4473225/94‑1 (MQ=60)
GGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGT < SRR4302533.1102467/94‑1 (MQ=60)
GGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTT < SRR4302533.3441512/94‑1 (MQ=60)
GTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTA > SRR4302533.5303201/1‑94 (MQ=60)
TCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAA < SRR4302533.2811638/94‑1 (MQ=60)
CATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAA < SRR4302533.1939005/94‑1 (MQ=60)
CATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAA > SRR4302533.1906121/1‑94 (MQ=60)
ATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAG > SRR4302533.2483484/1‑94 (MQ=60)
ATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAG > SRR4302533.289020/1‑94 (MQ=60)
GCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAG < SRR4302533.5518825/94‑1 (MQ=60)
CCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACGCTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGA < SRR4302533.1903863/94‑1 (MQ=60)
CCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGA < SRR4302533.4088576/94‑1 (MQ=60)
CCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGA > SRR4302533.5575730/1‑94 (MQ=60)
CATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGAT < SRR4302533.531034/94‑1 (MQ=60)
ATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATC < SRR4302533.1936035/94‑1 (MQ=60)
ATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATC < SRR4302533.4362853/94‑1 (MQ=60)
TCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCA < SRR4302533.2234422/94‑1 (MQ=60)
TCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCA < SRR4302533.3641241/94‑1 (MQ=60)
TCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCA < SRR4302533.3963898/94‑1 (MQ=60)
CAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCAC < SRR4302533.6061985/94‑1 (MQ=60)
AAGTTTGCCACTCCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCAC < SRR4302533.2216708/94‑1 (MQ=60)
AGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACG > SRR4302533.1385767/1‑94 (MQ=60)
AGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACG > SRR4302533.4161620/1‑94 (MQ=60)
AGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACG < SRR4302533.807845/94‑1 (MQ=60)
GTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGG > SRR4302533.6339895/1‑94 (MQ=60)
TTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGA < SRR4302533.1572638/94‑1 (MQ=60)
TTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGA < SRR4302533.1383050/94‑1 (MQ=60)
TTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAG < SRR4302533.1165624/94‑1 (MQ=60)
TTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAG < SRR4302533.4364262/94‑1 (MQ=60)
TTGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAG > SRR4302533.3576245/1‑94 (MQ=60)
TGCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGA > SRR4302533.3993249/1‑94 (MQ=60)
GCCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACGCTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAA < SRR4302533.5011594/94‑1 (MQ=60)
GCCACTTCAGCCAGCCGCTCATCCCCAGCGCGCCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAA < SRR4302533.4291821/94‑1 (MQ=60)
CCACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAG < SRR4302533.1039277/94‑1 (MQ=60)
CACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGA > SRR4302533.1705322/1‑94 (MQ=60)
ACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAG > SRR4302533.4968275/1‑94 (MQ=60)
ACTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAG < SRR4302533.4950718/94‑1 (MQ=60)
CTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGT > SRR4302533.800347/1‑94 (MQ=60)
CTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGT > SRR4302533.4194092/1‑94 (MQ=60)
CTTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGA > SRR4302533.4859496/1‑94 (MQ=60)
TTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTA > SRR4302533.310590/1‑94 (MQ=60)
TTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTA > SRR4302533.240910/1‑94 (MQ=60)
TTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTA < SRR4302533.5465038/94‑1 (MQ=60)
TTCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTA > SRR4302533.199374/1‑94 (MQ=60)
TCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAA < SRR4302533.2998025/94‑1 (MQ=60)
TCAGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAA < SRR4302533.1810510/94‑1 (MQ=60)
AGCCAGCCGCTCATCCCCAGCGCGGCAATAAACCCTAGCGCCAGCCATCCCC‑AAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAAC < SRR4302533.6221564/94‑1 (MQ=60)
AGCCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAA > SRR4302533.4204903/1‑94 (MQ=60)
CCAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACG < SRR4302533.3309106/94‑1 (MQ=60)
CAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGG > SRR4302533.4607998/1‑94 (MQ=60)
CAGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGG < SRR4302533.4750206/94‑1 (MQ=60)
AGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGA > SRR4302533.3327368/1‑94 (MQ=60)
AGCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGA > SRR4302533.3369157/1‑94 (MQ=60)
GCCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGAT < SRR4302533.313699/94‑1 (MQ=60)
CCGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGCCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATG < SRR4302533.3409976/94‑1 (MQ=60)
CGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGGAGAGTAAAACGGATGA > SRR4302533.5637864/1‑94 (MQ=60)
CGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGA < SRR4302533.1520494/94‑1 (MQ=60)
CGCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGA > SRR4302533.1128553/1‑94 (MQ=60)
GCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAA < SRR4302533.56681/94‑1 (MQ=60)
GCTCATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAA < SRR4302533.5561840/94‑1 (MQ=60)
ccgTCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAA < SRR4302533.1277936/91‑1 (MQ=60)
CATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAC > SRR4302533.450264/1‑94 (MQ=60)
CATCCCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAAC > SRR4302533.2563318/1‑94 (MQ=60)
CCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGA < SRR4302533.1994035/94‑1 (MQ=60)
CCCAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGA < SRR4302533.4534777/94‑1 (MQ=60)
CAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACG < SRR4302533.3965008/94‑1 (MQ=60)
CAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACG < SRR4302533.5132430/94‑1 (MQ=60)
CAGCGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACG < SRR4302533.3099430/94‑1 (MQ=60)
CGCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGGTC > SRR4302533.1310066/1‑94 (MQ=60)
GCGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGGTCG > SRR4302533.5082341/1‑94 (MQ=60)
|
GCAGATAGCAACCAAAATCCCAAAGCGCCTTTTCAGCTCTCCAGGGGTTCATGCCATCAGTTTGCCACTTCAGCCAGCCGCTCATCCCCAGCGTGGCAATAAACACTAGCGCCAGCCATCCCCAAAGGCGCTTCTGTTTAAAAGAGATCACGGAGAAGAGTAAAACGGATGAAAACGCGACGGTCG > NC_000913/3529756‑3529941
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
