Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,525,330 |
T→C |
T408T (ACT→ACC) |
yrfF → |
putative dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,525,330 | 0 | T | C | 100.0%
| 745.9
/ NA
| 233 | T408T (ACT→ACC) | yrfF | putative dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (109/124); total (109/124) |
Only 100 of 239 total aligned reads displayed.
AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT > NC_000913/3525240‑3525419
|
aGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTc < 1:5529870/93‑1 (MQ=255)
aGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTc < 1:3349122/93‑1 (MQ=255)
gCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTcc > 1:3662962/1‑93 (MQ=255)
gCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTcc < 1:2999412/93‑1 (MQ=255)
gCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTcc < 2:6200752/93‑1 (MQ=255)
gCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTcc < 2:1841845/93‑1 (MQ=255)
ccaccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCg < 2:3240796/93‑1 (MQ=255)
caccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCgg > 2:455523/1‑93 (MQ=255)
caccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCgg > 1:2367658/1‑93 (MQ=255)
caccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCgg < 1:4125637/93‑1 (MQ=255)
ccaGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGaa > 1:722483/1‑93 (MQ=255)
caGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAAc > 2:7806/1‑93 (MQ=255)
gCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCt > 2:5855635/1‑93 (MQ=255)
gCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCt > 1:3200917/1‑93 (MQ=255)
cGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTg < 2:1546612/93‑1 (MQ=255)
cGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTg < 2:4976332/93‑1 (MQ=255)
cGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTg > 1:6091621/1‑93 (MQ=255)
cGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTg > 1:3548348/1‑93 (MQ=255)
gTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGTGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTgg < 1:1041714/93‑1 (MQ=255)
tAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGa > 2:5264168/1‑93 (MQ=255)
tAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGa > 1:1264223/1‑93 (MQ=255)
tAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGa < 1:4210135/93‑1 (MQ=255)
aaaaCAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAg < 2:6249019/93‑1 (MQ=255)
aaaaCAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAg < 1:245669/93‑1 (MQ=255)
tGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGCACCTGGAGCGCGaaaa > 2:2214939/1‑93 (MQ=255)
tGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGaaaa > 1:3868465/1‑93 (MQ=255)
gggCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGaaaa < 2:157669/92‑1 (MQ=255)
ggCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAc < 2:5116971/93‑1 (MQ=255)
gCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAcc < 1:3396822/93‑1 (MQ=255)
cTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCa > 1:5336611/1‑93 (MQ=255)
tGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCaa < 1:4756743/93‑1 (MQ=255)
tGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCAcc > 2:1966552/1‑93 (MQ=255)
ggCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCt < 2:5503030/93‑1 (MQ=255)
ggCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCt < 1:5438731/93‑1 (MQ=255)
gCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCtt > 1:156667/1‑93 (MQ=255)
cGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCttt < 2:5714929/93‑1 (MQ=255)
tGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCttttt > 2:1264608/1‑93 (MQ=255)
gggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAc > 2:463054/1‑93 (MQ=255)
ggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAcc > 2:480868/1‑93 (MQ=255)
ggTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAcc < 1:6227920/93‑1 (MQ=255)
gTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCg < 1:4625777/93‑1 (MQ=255)
gTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCg < 2:2072598/93‑1 (MQ=255)
tAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGt > 2:556255/1‑93 (MQ=255)
tAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGt > 2:5197896/1‑93 (MQ=255)
tAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGt < 2:470873/93‑1 (MQ=255)
aGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGtt > 1:5802803/1‑93 (MQ=255)
ggCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCATCTTTTTTACCGttt > 2:5471983/1‑93 (MQ=255)
ggCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGttt < 1:929082/93‑1 (MQ=255)
ggCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGttt < 1:5642405/93‑1 (MQ=255)
gATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAc < 2:3737393/93‑1 (MQ=255)
gATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAc < 1:3655642/93‑1 (MQ=255)
aTACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACt < 2:4230539/93‑1 (MQ=255)
tACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTg < 2:4125289/93‑1 (MQ=255)
tACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTg < 2:5251691/93‑1 (MQ=255)
cATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCt > 2:1342096/1‑93 (MQ=255)
aTTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTc > 2:2937670/1‑93 (MQ=255)
ttGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCg > 2:2156600/1‑93 (MQ=255)
cGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAg > 1:5523753/1‑93 (MQ=255)
gTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCTCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGa < 1:4445634/93‑1 (MQ=255)
gTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGa > 1:3721159/1‑93 (MQ=255)
gTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGa < 1:3595614/93‑1 (MQ=255)
tATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGat < 2:9227/93‑1 (MQ=255)
aTTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTTCTCGCAGatc < 2:3857322/93‑1 (MQ=255)
ttAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGatca > 2:5599988/1‑93 (MQ=255)
tAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGatcat < 1:5249424/93‑1 (MQ=255)
gCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCt < 2:3603660/93‑1 (MQ=255)
cGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTg < 2:2496167/93‑1 (MQ=255)
cGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTg < 2:2367658/93‑1 (MQ=255)
cGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTg < 1:2712504/93‑1 (MQ=255)
ggTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTgg > 1:3521063/1‑93 (MQ=255)
tccGGGAATGTGTAATATTCGAACCTCCGGAACCTGGATCGCGAAAACCAATTCACCTTTTTTACCGTTAGACTGCTCGCAGATCATCTGGaa < 2:2318994/91‑1 (MQ=255)
tACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGaa < 1:4961993/93‑1 (MQ=255)
aCGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAac < 1:1865494/93‑1 (MQ=255)
cGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacg > 1:5904918/1‑93 (MQ=255)
gggAATGTGTAATATTAGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacga < 1:2809347/93‑1 (MQ=255)
gAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAacgacg < 2:1749109/93‑1 (MQ=255)
aaTGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGc > 2:5067152/1‑93 (MQ=255)
tgtgTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGccc > 2:5938747/1‑93 (MQ=255)
tgtgTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGccc > 1:4465763/1‑93 (MQ=255)
gtgtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCg > 1:1770916/1‑93 (MQ=255)
tgtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGTACGACGCCCgt > 2:3288494/1‑92 (MQ=255)
tgtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGc > 2:2709930/1‑93 (MQ=255)
tgtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGc < 1:5071389/93‑1 (MQ=255)
gtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCt > 2:5012801/1‑93 (MQ=255)
gtAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCt > 1:673446/1‑93 (MQ=255)
aaTATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCa > 1:3970235/1‑93 (MQ=255)
aaTATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCa < 1:4698916/93‑1 (MQ=255)
aaTATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCa > 2:6272055/1‑93 (MQ=255)
aaTATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCa < 2:4290469/93‑1 (MQ=255)
atatTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAt < 1:4312936/93‑1 (MQ=255)
atatTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAt < 2:61141/93‑1 (MQ=255)
tatTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAtt > 1:4889244/1‑93 (MQ=255)
tatTCGAACCTCCGGAACCTGGAGCGCAAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAtt < 1:1373290/93‑1 (MQ=255)
atTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTg < 1:1205425/93‑1 (MQ=255)
atTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTg < 2:806593/93‑1 (MQ=255)
atTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTg > 2:4397189/1‑93 (MQ=255)
cGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCa > 2:5771353/1‑93 (MQ=255)
gAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAt > 1:2957758/1‑93 (MQ=255)
aaCCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAtt > 1:1895678/1‑93 (MQ=255)
aaCCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAtt < 1:2586813/93‑1 (MQ=255)
|
AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT > NC_000913/3525240‑3525419
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCA > NC_000913/3525238‑3525423
|
GAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCT < SRR4302533.4713672/94‑1 (MQ=60)
GAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCT > SRR4302533.3305601/1‑94 (MQ=60)
GAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCT < SRR4302533.2399430/94‑1 (MQ=60)
AAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTC < SRR4302533.1665758/94‑1 (MQ=60)
AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCC < SRR4302533.3369815/94‑1 (MQ=60)
AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCC > SRR4302533.593035/1‑94 (MQ=60)
AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCC < SRR4302533.5563253/94‑1 (MQ=60)
AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCC > SRR4302533.3685479/1‑94 (MQ=60)
AGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCC < SRR4302533.2624503/94‑1 (MQ=60)
GCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCG < SRR4302533.3017756/94‑1 (MQ=60)
CCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGG > SRR4302533.2382307/1‑94 (MQ=60)
CACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGA < SRR4302533.4150682/94‑1 (MQ=60)
CACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGA > SRR4302533.4521225/1‑94 (MQ=60)
ACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAA > SRR4302533.2962165/1‑94 (MQ=60)
ACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAA > SRR4302533.726756/1‑94 (MQ=60)
ACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAA < SRR4302533.873229/94‑1 (MQ=60)
ACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAA > SRR4302533.1065586/1‑94 (MQ=60)
CCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAAC > SRR4302533.1884280/1‑94 (MQ=60)
CCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAAC > SRR4302533.4037469/1‑94 (MQ=60)
AGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCT > SRR4302533.3220613/1‑94 (MQ=60)
GCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTG > SRR4302533.6128436/1‑94 (MQ=60)
GCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTG > SRR4302533.3570215/1‑94 (MQ=60)
GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGTGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA < SRR4302533.1047838/94‑1 (MQ=60)
GTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGA > SRR4302533.1271789/1‑94 (MQ=60)
TAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAG < SRR4302533.4235602/94‑1 (MQ=60)
TAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAG < SRR4302533.3798939/94‑1 (MQ=60)
AAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGC < SRR4302533.247190/94‑1 (MQ=60)
AAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGC > SRR4302533.5671848/1‑94 (MQ=60)
AAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCG > SRR4302533.3565637/1‑94 (MQ=60)
ACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCG < SRR4302533.2700389/94‑1 (MQ=60)
AACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAA > SRR4302533.4033482/1‑94 (MQ=60)
AACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAA > SRR4302533.3651465/1‑94 (MQ=60)
ACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAA < SRR4302533.694476/94‑1 (MQ=60)
CTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAA > SRR4302533.3892084/1‑94 (MQ=60)
TGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAC < SRR4302533.4482785/94‑1 (MQ=60)
TGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAAC < SRR4302533.2255986/94‑1 (MQ=60)
GCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCA > SRR4302533.5368601/1‑94 (MQ=60)
GCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCA < SRR4302533.3417798/94‑1 (MQ=60)
TGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAAT > SRR4302533.1579433/1‑94 (MQ=60)
TGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAAT < SRR4302533.4785606/94‑1 (MQ=60)
GACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATT > SRR4302533.3910849/1‑94 (MQ=60)
ACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTC < SRR4302533.2793912/94‑1 (MQ=60)
CGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCA < SRR4302533.4622668/94‑1 (MQ=60)
CGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCA < SRR4302533.4742286/94‑1 (MQ=60)
TGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCT < SRR4302533.605658/94‑1 (MQ=60)
GGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTT < SRR4302533.3594136/94‑1 (MQ=60)
GGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTT < SRR4302533.5471487/94‑1 (MQ=60)
GGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTT > SRR4302533.157665/1‑94 (MQ=60)
GGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTT < SRR4302533.3525226/94‑1 (MQ=60)
GTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTT > SRR4302533.1532486/1‑94 (MQ=60)
GTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTT < SRR4302533.6280001/94‑1 (MQ=60)
TGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTT < SRR4302533.1242770/94‑1 (MQ=60)
TGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTT < SRR4302533.3262785/94‑1 (MQ=60)
CGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAC > SRR4302533.2879264/1‑94 (MQ=60)
CGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTAC < SRR4302533.5040056/94‑1 (MQ=60)
GGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCG < SRR4302533.6265229/94‑1 (MQ=60)
GTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGT < SRR4302533.4653813/94‑1 (MQ=60)
TAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTT > SRR4302533.5837854/1‑94 (MQ=60)
AGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTT > SRR4302533.2995489/1‑94 (MQ=60)
GGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTG < SRR4302533.934535/94‑1 (MQ=60)
GGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTG < SRR4302533.5676508/94‑1 (MQ=60)
CGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGAC < SRR4302533.5375565/94‑1 (MQ=60)
GATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACT < SRR4302533.624796/94‑1 (MQ=60)
GATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACT < SRR4302533.3678114/94‑1 (MQ=60)
GATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACT < SRR4302533.4330249/94‑1 (MQ=60)
GATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACT > SRR4302533.4674174/1‑94 (MQ=60)
TACATTGCGTATTAGCGGTACGGGAATATGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGC > SRR4302533.13405/1‑94 (MQ=60)
CATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTC > SRR4302533.1873878/1‑94 (MQ=60)
GCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAG > SRR4302533.5557103/1‑94 (MQ=60)
GCGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAG > SRR4302533.500255/1‑94 (MQ=60)
CGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGA > SRR4302533.3743998/1‑94 (MQ=60)
CGTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGA > SRR4302533.4436476/1‑94 (MQ=60)
GTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCTCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGAT < SRR4302533.4472525/94‑1 (MQ=60)
GTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGAT < SRR4302533.3617735/94‑1 (MQ=60)
GTATTAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGAT > SRR4302533.5818532/1‑94 (MQ=60)
TAGCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATC < SRR4302533.5280974/94‑1 (MQ=60)
GCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTG < SRR4302533.3624909/94‑1 (MQ=60)
GCGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTG < SRR4302533.5562133/94‑1 (MQ=60)
CGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGG < SRR4302533.2729159/94‑1 (MQ=60)
CGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGG > SRR4302533.239592/1‑94 (MQ=60)
CGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGG > SRR4302533.3542769/1‑94 (MQ=60)
CGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGG < SRR4302533.1343027/94‑1 (MQ=60)
CGGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGG > SRR4302533.3740345/1‑94 (MQ=60)
GGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGA < SRR4302533.4366758/94‑1 (MQ=60)
GGTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGA < SRR4302533.5284697/94‑1 (MQ=60)
GTACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAA > SRR4302533.5406697/1‑94 (MQ=60)
TACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAAC < SRR4302533.1814172/94‑1 (MQ=60)
TACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAAC < SRR4302533.4992079/94‑1 (MQ=60)
TACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAAC > SRR4302533.3446575/1‑94 (MQ=60)
TACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTCGAAC > SRR4302533.2474812/1‑94 (MQ=60)
ACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACG < SRR4302533.1876872/94‑1 (MQ=60)
ACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACG > SRR4302533.5940580/1‑94 (MQ=60)
ACGGGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACG < SRR4302533.825928/94‑1 (MQ=60)
GGGAATGTGTAATATTAGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGAC < SRR4302533.2826634/94‑1 (MQ=60)
GGAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACG < SRR4302533.5520758/94‑1 (MQ=60)
GAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGC > SRR4302533.4849476/1‑94 (MQ=60)
GAATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGC > SRR4302533.5631283/1‑94 (MQ=60)
ATGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCC > SRR4302533.4492773/1‑94 (MQ=60)
TGTGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCG > SRR4302533.1781697/1‑94 (MQ=60)
TGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCT < SRR4302533.5102043/94‑1 (MQ=60)
TGTAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCT > SRR4302533.677421/1‑94 (MQ=60)
TAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCA > SRR4302533.3994412/1‑94 (MQ=60)
TAATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCA > SRR4302533.2094362/1‑94 (MQ=60)
AATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCAT < SRR4302533.4727400/94‑1 (MQ=60)
ATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATT > SRR4302533.4918870/1‑94 (MQ=60)
ATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATT < SRR4302533.63516/94‑1 (MQ=60)
ATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATT < SRR4302533.4338901/94‑1 (MQ=60)
ATATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATT < SRR4302533.3178058/94‑1 (MQ=60)
TATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTG < SRR4302533.4970455/94‑1 (MQ=60)
TATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTG > SRR4302533.3870807/1‑94 (MQ=60)
TATTCGAACCTCCGGAACCTGGAGCGCAAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTG < SRR4302533.1381552/94‑1 (MQ=60)
TTTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGC < SRR4302533.5151716/94‑1 (MQ=60)
ATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGC < SRR4302533.3681011/94‑1 (MQ=60)
ATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGC > SRR4302533.4201216/1‑94 (MQ=60)
ATTCGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGC < SRR4302533.1212668/94‑1 (MQ=60)
CGAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCAT > SRR4302533.2975835/1‑94 (MQ=60)
GAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT < SRR4302533.3239089/94‑1 (MQ=60)
GAACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATT > SRR4302533.1907248/1‑94 (MQ=60)
AACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTA < SRR4302533.5925017/94‑1 (MQ=60)
AACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTA < SRR4302533.4795067/94‑1 (MQ=60)
AACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTA < SRR4302533.2602715/94‑1 (MQ=60)
ACCTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTAC < SRR4302533.4716497/94‑1 (MQ=60)
CTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCA > SRR4302533.3081782/1‑94 (MQ=60)
CTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCA < SRR4302533.5582563/94‑1 (MQ=60)
CTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCA > SRR4302533.1960851/1‑94 (MQ=60)
CTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCA > SRR4302533.2642589/1‑94 (MQ=60)
|
GAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCA > NC_000913/3525238‑3525423
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
