Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,586,561 T→C N97S (AAC→AGC)  ugpC ← ATP‑binding component of sn‑glycerol 3‑phosphate transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,586,5610TC100.0% 1290.0 / NA 400N97S (AAC→AGC) ugpCATP‑binding component of sn‑glycerol 3‑phosphate transport system
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (207/193);  total (207/193)

Only 100 of 415 total aligned reads displayed.

CGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGC  >  NC_000913/3586471‑3586650
                                                                                          |                                                                                         
cgcTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTc                                                                                         <  1:909247/93‑1 (MQ=255)
  cTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTg                                                                                       <  1:3354539/93‑1 (MQ=255)
   tCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTgg                                                                                      <  1:8709423/93‑1 (MQ=255)
     ggCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGaa                                                                                    <  1:1094885/93‑1 (MQ=255)
     ggCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGaa                                                                                    <  2:2056112/93‑1 (MQ=255)
     ggCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGaa                                                                                    >  2:9567543/1‑93 (MQ=255)
     gagaaTTTGCTGCTTCCCCACTCCGCTAATTTTCAGCCCCCACTCCATGTTTTCTTCCACGCTCATATGCGGATAAAGCGCGTAGCGCTGGaa                                                                                    <  2:8052926/90‑1 (MQ=255)
      gCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAac                                                                                   >  1:5170168/1‑93 (MQ=255)
      gCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGAAACTCATATGCGGATAAAGCGAGTCGCTCTGGAac                                                                                   >  1:6774276/1‑93 (MQ=255)
        aaTTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAacac                                                                                 <  2:6138665/93‑1 (MQ=255)
          tttGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCa                                                                               >  2:3699299/1‑93 (MQ=255)
          tttGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCa                                                                               >  2:5161620/1‑93 (MQ=255)
           ttGCTGCTTGCCCATCCCGCGAATTTTCAGCCCCCGCGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCAt                                                                              <  1:3751594/93‑1 (MQ=255)
             gctgctTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCg                                                                            >  1:5482497/1‑93 (MQ=255)
              ctgctTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGc                                                                           >  2:8827001/1‑93 (MQ=255)
              ctgctTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGc                                                                           <  2:8567352/93‑1 (MQ=255)
               tgctTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCa                                                                          <  1:169383/93‑1 (MQ=255)
               tgctTGCCCATGCCGCGAATTGTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCa                                                                          <  1:7715659/93‑1 (MQ=255)
                gctTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCaa                                                                         >  2:4807430/1‑93 (MQ=255)
                  ttGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATc                                                                       <  2:3560640/93‑1 (MQ=255)
                  ttGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATc                                                                       <  1:6526244/93‑1 (MQ=255)
                    gCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATccc                                                                     <  2:1563780/93‑1 (MQ=255)
                       cATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCcgcg                                                                  >  2:9583843/1‑93 (MQ=255)
                         tGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCcgcggt                                                                >  1:3473543/1‑91 (MQ=255)
                         tGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGAt                                                                <  2:6057681/93‑1 (MQ=255)
                          gCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATc                                                               <  2:4135604/93‑1 (MQ=255)
                            cgcgAATTTTCAGCCCCCACGGCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCtt                                                             >  1:1774951/1‑93 (MQ=255)
                            cgcgAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCtt                                                             <  1:5350765/93‑1 (MQ=255)
                             gcgAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCttt                                                            <  2:5964885/93‑1 (MQ=255)
                             gcgAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCttt                                                            <  2:9353508/93‑1 (MQ=255)
                             cccaaTTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCttt                                                            <  1:7213305/90‑1 (MQ=255)
                              cgAATTTTCAGCCCCCACGCTATGTTTTCTTCGACACTCATATGCGGATAAGGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCtttt                                                           <  2:7944807/93‑1 (MQ=255)
                               gAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTg                                                          <  1:7026385/93‑1 (MQ=255)
                                aaTTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTgg                                                         >  2:8466486/1‑93 (MQ=255)
                                 aTTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGc                                                        <  1:9673551/93‑1 (MQ=255)
                                   tttCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTc                                                      <  1:6832401/93‑1 (MQ=255)
                                   tttCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTc                                                      <  1:9189099/93‑1 (MQ=255)
                                    ttCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTcc                                                     <  1:9360662/93‑1 (MQ=255)
                                    ttCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTcc                                                     <  2:7301380/93‑1 (MQ=255)
                                     tCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCa                                                    <  2:9717016/93‑1 (MQ=255)
                                      cAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCAt                                                   <  2:10033952/93‑1 (MQ=255)
                                        gCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCAttt                                                 >  2:7466263/1‑93 (MQ=255)
                                         cccccACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTc                                                <  2:4896209/93‑1 (MQ=255)
                                         cccccACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTc                                                <  2:5627360/93‑1 (MQ=255)
                                         cccccACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTc                                                >  2:2178094/1‑93 (MQ=255)
                                           cccACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAg                                              <  2:5384304/93‑1 (MQ=255)
                                            ccACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGt                                             <  2:669041/93‑1 (MQ=255)
                                            ccACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGt                                             >  1:6253146/1‑93 (MQ=255)
                                             cACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTc                                            >  2:4457854/1‑93 (MQ=255)
                                              aCGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCa                                           >  2:498564/1‑93 (MQ=255)
                                                gCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcg                                         >  1:4191121/1‑93 (MQ=255)
                                                 ccATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcgc                                        >  1:1246534/1‑93 (MQ=255)
                                                  cATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcgcg                                       >  2:7538397/1‑93 (MQ=255)
                                                  cATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcgcg                                       >  1:5038126/1‑93 (MQ=255)
                                                  cATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcgcg                                       >  2:8720003/1‑93 (MQ=255)
                                                   aTGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACgcgc                                      >  2:3881625/1‑93 (MQ=255)
                                                    tGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAcgcgat                                     >  2:2954075/1‑91 (MQ=255)
                                                     gTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTg                                    >  1:1940064/1‑93 (MQ=255)
                                                      ttttCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTgg                                   >  2:272298/1‑93 (MQ=255)
                                                      ttttCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTgg                                   <  1:4936988/93‑1 (MQ=255)
                                                      ttttCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTgg                                   >  1:7862425/1‑93 (MQ=255)
                                                       tttCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGt                                  <  1:7340363/93‑1 (MQ=255)
                                                       tttCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGt                                  <  1:760592/93‑1 (MQ=255)
                                                          cttcGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGt                               >  1:3594094/1‑93 (MQ=255)
                                                          cttcGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGt                               >  2:3401652/1‑93 (MQ=255)
                                                           ttcGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGtt                              >  1:4425071/1‑93 (MQ=255)
                                                           ctcGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGtt                              <  1:2092699/92‑1 (MQ=255)
                                                            tcGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTg                             <  1:4005756/93‑1 (MQ=255)
                                                            tcGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTg                             >  2:9158857/1‑93 (MQ=255)
                                                            tcGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTg                             <  1:2396569/93‑1 (MQ=255)
                                                            tcGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTg                             >  2:1400015/1‑93 (MQ=255)
                                                              gACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGAt                           <  1:1676879/93‑1 (MQ=255)
                                                              gACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGAt                           >  1:3875012/1‑93 (MQ=255)
                                                              cacacTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGAt                           <  1:3268544/92‑1 (MQ=255)
                                                               acacTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATc                          <  2:1779232/93‑1 (MQ=255)
                                                                 acTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCa                        <  2:4695158/93‑1 (MQ=255)
                                                                 acTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCa                        >  1:952894/1‑93 (MQ=255)
                                                                 acTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCa                        <  2:3249227/93‑1 (MQ=255)
                                                                  cTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAg                       >  1:8232202/1‑93 (MQ=255)
                                                                   tCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTTGTTCCATTTCACTCACGCGCTGGTCGTTGATCCAGa                      >  1:1502270/1‑93 (MQ=38)
                                                                    cATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGat                     >  2:4597758/1‑93 (MQ=255)
                                                                      tatGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGatat                   >  2:9491882/1‑93 (MQ=255)
                                                                      tatGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGatat                   >  2:7766420/1‑93 (MQ=255)
                                                                      tatGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGatat                   <  2:828841/93‑1 (MQ=255)
                                                                      tatGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGatat                   >  2:1175378/1‑93 (MQ=255)
                                                                      tatGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTAATCCAGatat                   >  1:1584367/1‑93 (MQ=255)
                                                                      tatGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCGTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGatat                   >  2:6807516/1‑93 (MQ=255)
                                                                       atGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATc                  >  2:6432209/1‑93 (MQ=255)
                                                                          cGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGct               >  1:8477738/1‑92 (MQ=255)
                                                                           ggATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCt              <  1:2281870/93‑1 (MQ=255)
                                                                             aTAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTc            >  2:7001473/1‑93 (MQ=255)
                                                                              tAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCt           <  1:6410721/93‑1 (MQ=255)
                                                                               aaaGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTg          >  1:2717715/1‑93 (MQ=255)
                                                                                aaGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGt         >  1:2937189/1‑93 (MQ=255)
                                                                                  gcgcGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCa       <  1:3148439/93‑1 (MQ=255)
                                                                                   cgcgTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCAc      <  2:2373654/93‑1 (MQ=255)
                                                                                    gcgTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCAcc     >  1:8294621/1‑93 (MQ=255)
                                                                                      gTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCg   >  2:2453582/1‑93 (MQ=255)
                                                                                       tAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGc  <  1:5948896/93‑1 (MQ=255)
                                                                                       tAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGc  >  1:8841740/1‑93 (MQ=255)
                                                                                          |                                                                                         
CGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGC  >  NC_000913/3586471‑3586650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 220 total aligned reads displayed.
ACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCA  >  NC_000913/3586468‑3586654
                                                                                             |                                                                                             
ACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGC                                                                                               >  SRR4302540.4757303/1‑94 (MQ=60)
ACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGC                                                                                               <  SRR4302540.5308452/94‑1 (MQ=60)
 CGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCT                                                                                              <  SRR4302540.6094623/94‑1 (MQ=60)
   CGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCT                                                                                            >  SRR4302540.2833556/1‑94 (MQ=60)
   CGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCT                                                                                            <  SRR4302540.918885/94‑1 (MQ=60)
     CTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGG                                                                                          <  SRR4302540.5320856/94‑1 (MQ=60)
     CTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGG                                                                                          <  SRR4302540.3391305/94‑1 (MQ=60)
     CTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGG                                                                                          >  SRR4302540.1641810/1‑94 (MQ=60)
      TCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGA                                                                                         <  SRR4302540.8810518/94‑1 (MQ=60)
        GGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAAC                                                                                       <  SRR4302540.1106141/94‑1 (MQ=60)
        GGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAAC                                                                                       >  SRR4302540.6849147/1‑94 (MQ=60)
        GGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAAC                                                                                       <  SRR4302540.3224394/94‑1 (MQ=60)
        GGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAAC                                                                                       <  SRR4302540.3468849/94‑1 (MQ=60)
        GGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAAC                                                                                       >  SRR4302540.111375/1‑94 (MQ=60)
          CAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACAC                                                                                     >  SRR4302540.3238620/1‑94 (MQ=60)
             TTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCAT                                                                                  <  SRR4302540.3126222/94‑1 (MQ=60)
              TTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATC                                                                                 <  SRR4302540.9337629/94‑1 (MQ=60)
              TTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATC                                                                                 <  SRR4302540.9411397/94‑1 (MQ=60)
              TTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATC                                                                                 <  SRR4302540.8526787/94‑1 (MQ=60)
              TTGCTGCTTGCCCATCCCGCGAATTTTCAGCCCCCGCGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATC                                                                                 <  SRR4302540.3792522/94‑1 (MQ=60)
              TTGCCGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATC                                                                                 <  SRR4302540.8526789/94‑1 (MQ=60)
               TGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCG                                                                                >  SRR4302540.551558/1‑94 (MQ=60)
               TGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCG                                                                                <  SRR4302540.2155856/94‑1 (MQ=60)
               TGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCG                                                                                >  SRR4302540.2126236/1‑94 (MQ=60)
               TGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCG                                                                                >  SRR4302540.5542853/1‑94 (MQ=60)
                GCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGC                                                                               >  SRR4302540.6907484/1‑94 (MQ=60)
                 CTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCA                                                                              >  SRR4302540.4062575/1‑94 (MQ=60)
                 CTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCA                                                                              >  SRR4302540.9180167/1‑94 (MQ=60)
                  TGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAA                                                                             >  SRR4302540.6712810/1‑94 (MQ=60)
                  TGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAA                                                                             <  SRR4302540.171080/94‑1 (MQ=60)
                  TGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAA                                                                             <  SRR4302540.7804695/94‑1 (MQ=60)
                  TGCTTGCCCATGCCGCGAATTGTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAA                                                                             <  SRR4302540.7804696/94‑1 (MQ=60)
                    CTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATC                                                                           <  SRR4302540.6553120/94‑1 (MQ=60)
                    CTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATC                                                                           >  SRR4302540.9211304/1‑94 (MQ=60)
                     TTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCC                                                                          <  SRR4302540.513518/94‑1 (MQ=60)
                     TTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCC                                                                          <  SRR4302540.6598722/94‑1 (MQ=60)
                     TTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCC                                                                          <  SRR4302540.25742/94‑1 (MQ=60)
                     TTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCC                                                                          >  SRR4302540.750663/1‑94 (MQ=60)
                     TTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCC                                                                          >  SRR4302540.9148236/1‑94 (MQ=60)
                      TGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCC                                                                         <  SRR4302540.3927366/94‑1 (MQ=60)
                      TGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCC                                                                         >  SRR4302540.9512825/1‑94 (MQ=60)
                      TGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCC                                                                         <  SRR4302540.1536187/94‑1 (MQ=60)
                        CCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGC                                                                       >  SRR4302540.516541/1‑94 (MQ=60)
                        CCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGC                                                                       >  SRR4302540.921302/1‑94 (MQ=60)
                         CCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTTGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCG                                                                      >  SRR4302540.2079267/1‑94 (MQ=60)
                         CCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCG                                                                      >  SRR4302540.2079266/1‑94 (MQ=60)
                          CATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGA                                                                     <  SRR4302540.8381838/94‑1 (MQ=60)
                           ATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGGT                                                                    >  SRR4302540.3511361/1‑94 (MQ=60)
                           ATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGAT                                                                    >  SRR4302540.2802295/1‑94 (MQ=60)
                           ATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGAT                                                                    >  SRR4302540.3181353/1‑94 (MQ=60)
                             GCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCT                                                                  >  SRR4302540.6552259/1‑94 (MQ=60)
                             GCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCT                                                                  >  SRR4302540.5007687/1‑94 (MQ=60)
                             GCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCT                                                                  >  SRR4302540.4188888/1‑94 (MQ=60)
                              CCGCGAATTTTCAGCCCCCACGGCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTT                                                                 >  SRR4302540.1794225/1‑94 (MQ=60)
                              CCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAACGCGCGTAGCTCTGGAACACCATCGCACTCCCGCGATCTT                                                                 >  SRR4302540.2225747/1‑94 (MQ=60)
                              CCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACGCCATCGCAATCCCGCGATCTT                                                                 <  SRR4302540.4631814/94‑1 (MQ=60)
                               CGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTT                                                                <  SRR4302540.5409485/94‑1 (MQ=60)
                                cccAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTT                                                               <  SRR4302540.7293717/91‑1 (MQ=60)
                                GCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTT                                                               <  SRR4302540.1601391/94‑1 (MQ=60)
                                 CGAATTTTCAGCCCCCGAGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTG                                                              <  SRR4302540.9091207/94‑1 (MQ=60)
                                 CGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTG                                                              <  SRR4302540.1656435/94‑1 (MQ=60)
                                  GAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGG                                                             >  SRR4302540.4334280/1‑94 (MQ=60)
                                  GAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGG                                                             <  SRR4302540.73457/94‑1 (MQ=60)
                                  GAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGG                                                             <  SRR4302540.7104440/94‑1 (MQ=60)
                                    ATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCT                                                           <  SRR4302540.9787377/94‑1 (MQ=60)
                                      TTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCC                                                         <  SRR4302540.6908073/94‑1 (MQ=60)
                                      TTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCC                                                         >  SRR4302540.3975409/1‑94 (MQ=60)
                                      TTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCC                                                         <  SRR4302540.9299297/94‑1 (MQ=60)
                                       TTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCA                                                        <  SRR4302540.547347/94‑1 (MQ=60)
                                       TTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCA                                                        <  SRR4302540.9472137/94‑1 (MQ=60)
                                        TCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCAT                                                       <  SRR4302540.1940893/94‑1 (MQ=60)
                                         CAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATT                                                      >  SRR4302540.9548248/1‑94 (MQ=60)
                                         CAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATT                                                      <  SRR4302540.1946163/94‑1 (MQ=60)
                                         CAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATT                                                      <  SRR4302540.2523741/94‑1 (MQ=60)
                                           GCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTC                                                    >  SRR4302540.520491/1‑94 (MQ=60)
                                           GCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTC                                                    <  SRR4302540.7732744/94‑1 (MQ=60)
                                           GCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTC                                                    >  SRR4302540.3213759/1‑94 (MQ=60)
                                           GCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTC                                                    <  SRR4302540.112760/94‑1 (MQ=60)
                                            CCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCA                                                   <  SRR4302540.6206030/94‑1 (MQ=60)
                                            CCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCA                                                   <  SRR4302540.8128889/94‑1 (MQ=60)
                                            CCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCA                                                   <  SRR4302540.6206031/94‑1 (MQ=60)
                                            CCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCA                                                   <  SRR4302540.5474951/94‑1 (MQ=60)
                                            CCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCA                                                   <  SRR4302540.3655449/94‑1 (MQ=60)
                                             CCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAG                                                  <  SRR4302540.1878022/94‑1 (MQ=60)
                                             CCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAG                                                  <  SRR4302540.3571858/94‑1 (MQ=60)
                                              CCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGT                                                 >  SRR4302540.982911/1‑94 (MQ=60)
                                              CCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGT                                                 >  SRR4302540.6322721/1‑94 (MQ=60)
                                              CCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGT                                                 >  SRR4302540.4403922/1‑94 (MQ=60)
                                                CACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCA                                               >  SRR4302540.3739719/1‑94 (MQ=60)
                                                CACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCA                                               >  SRR4302540.146158/1‑94 (MQ=60)
                                                CACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCA                                               <  SRR4302540.1632077/94‑1 (MQ=60)
                                                 ACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAC                                              >  SRR4302540.6960158/1‑94 (MQ=60)
                                                 ACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAC                                              <  SRR4302540.420914/94‑1 (MQ=60)
                                                 ACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCAC                                              <  SRR4302540.8729274/94‑1 (MQ=60)
                                                  CGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACG                                             >  SRR4302540.4236704/1‑94 (MQ=60)
                                                  CGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACG                                             <  SRR4302540.1775581/94‑1 (MQ=60)
                                                   GCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGC                                            >  SRR4302540.1259253/1‑94 (MQ=60)
                                                    CCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCG                                           <  SRR4302540.1766822/94‑1 (MQ=60)
                                                    CCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCG                                           >  SRR4302540.2407266/1‑94 (MQ=60)
                                                    CCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCG                                           >  SRR4302540.6423519/1‑94 (MQ=60)
                                                    CCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCG                                           >  SRR4302540.590165/1‑94 (MQ=60)
                                                    CCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCG                                           >  SRR4302540.5092623/1‑94 (MQ=60)
                                                     CATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGCACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACacga                                          >  SRR4302540.5050552/1‑90 (MQ=60)
                                                     CATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGC                                          >  SRR4302540.2085699/1‑94 (MQ=60)
                                                      ATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCT                                         >  SRR4302540.709418/1‑94 (MQ=60)
                                                      ATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCT                                         <  SRR4302540.3863328/94‑1 (MQ=60)
                                                      ATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCT                                         >  SRR4302540.7733163/1‑94 (MQ=60)
                                                      ATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCT                                         >  SRR4302540.7224916/1‑94 (MQ=60)
                                                      ATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCT                                         <  SRR4302540.133556/94‑1 (MQ=60)
                                                      ATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCT                                         >  SRR4302540.9652348/1‑94 (MQ=60)
                                                       TGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTG                                        >  SRR4302540.529629/1‑94 (MQ=60)
                                                        GTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGG                                       >  SRR4302540.7954286/1‑94 (MQ=60)
                                                        GTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGG                                       >  SRR4302540.3567586/1‑94 (MQ=60)
                                                         TTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGT                                      >  SRR4302540.4406288/1‑94 (MQ=60)
                                                         TTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGT                                      <  SRR4302540.4990249/94‑1 (MQ=60)
                                                          TTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTC                                     <  SRR4302540.768687/94‑1 (MQ=60)
                                                          TTTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTC                                     <  SRR4302540.7422273/94‑1 (MQ=60)
                                                           TTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCG                                    <  SRR4302540.858966/94‑1 (MQ=60)
                                                           TTCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCGGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCG                                    <  SRR4302540.8169346/94‑1 (MQ=60)
                                                            TCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGT                                   >  SRR4302540.3419123/1‑94 (MQ=60)
                                                            TCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGT                                   >  SRR4302540.3633359/1‑94 (MQ=60)
                                                            TCTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGT                                   <  SRR4302540.9263095/94‑1 (MQ=60)
                                                             CTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTT                                  >  SRR4302540.4473013/1‑94 (MQ=60)
                                                             CTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTT                                  <  SRR4302540.7364809/94‑1 (MQ=60)
                                                             CTTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTT                                  <  SRR4302540.8865846/94‑1 (MQ=60)
                                                              CTCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTG                                 <  SRR4302540.2115170/94‑1 (MQ=60)
                                                               TCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGA                                <  SRR4302540.8387240/94‑1 (MQ=60)
                                                               TCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGA                                <  SRR4302540.8387569/94‑1 (MQ=60)
                                                               TCGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGA                                <  SRR4302540.2422397/94‑1 (MQ=60)
                                                                CGACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGAT                               >  SRR4302540.3917131/1‑94 (MQ=60)
                                                                CGACACTCAGATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGAT                               <  SRR4302540.7342151/94‑1 (MQ=60)
                                                                 GACACTCATATGCGTATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATC                              <  SRR4302540.66007/94‑1 (MQ=60)
                                                                 GACACTCATATGCGGATAAAGCGCGTAGCTCTGGGACACCATCGCAATCCCGCCATCTATTGGCTCCATTTCAGTCACGCGCggggctgtgatc                              >  SRR4302540.3904651/1‑82 (MQ=60)
                                                                 GACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATC                              <  SRR4302540.1695094/94‑1 (MQ=60)
                                                                 GACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATC                              <  SRR4302540.3304217/94‑1 (MQ=60)
                                                                 GACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATC                              >  SRR4302540.2742927/1‑94 (MQ=60)
                                                                 CACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATC                              <  SRR4302540.3304216/94‑1 (MQ=60)
                                                                  ACACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCC                             >  SRR4302540.1912237/1‑94 (MQ=60)
                                                                   CACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCA                            >  SRR4302540.962786/1‑94 (MQ=60)
                                                                    ACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAG                           <  SRR4302540.2147752/94‑1 (MQ=60)
                                                                    ACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAG                           >  SRR4302540.7169807/1‑94 (MQ=60)
                                                                    ACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAG                           <  SRR4302540.4047267/94‑1 (MQ=60)
                                                                    ACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAG                           <  SRR4302540.1716553/94‑1 (MQ=60)
                                                                    ACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAG                           >  SRR4302540.169762/1‑94 (MQ=60)
                                                                    ACTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAG                           >  SRR4302540.8327887/1‑94 (MQ=60)
                                                                     CTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTTGTTCCATTTCACTCACGCGCTGGTCGTTGATCCAGA                          >  SRR4302540.1518828/1‑94 (MQ=60)
                                                                     CTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGA                          <  SRR4302540.8800104/94‑1 (MQ=60)
                                                                     CTCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGA                          >  SRR4302540.6104172/1‑94 (MQ=60)
                                                                      TCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGAT                         >  SRR4302540.550474/1‑94 (MQ=60)
                                                                      TCATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGAT                         <  SRR4302540.2339310/94‑1 (MQ=60)
                                                                       CATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATA                        >  SRR4302540.8204400/1‑94 (MQ=60)
                                                                       CATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATA                        >  SRR4302540.6476506/1‑94 (MQ=60)
                                                                        ATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATAT                       >  SRR4302540.7997966/1‑94 (MQ=60)
                                                                        ATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATAT                       >  SRR4302540.8832032/1‑94 (MQ=60)
                                                                        ATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCAAGATAT                       >  SRR4302540.5252461/1‑94 (MQ=60)
                                                                        ATATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTAATCCAGATAT                       >  SRR4302540.1601671/1‑94 (MQ=60)
                                                                         TATGCGGATAAAGCGCGTAGCTCTGGAACGCCATCTCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATC                      <  SRR4302540.3402152/94‑1 (MQ=60)
                                                                         TATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATC                      >  SRR4302540.6493459/1‑94 (MQ=60)
                                                                          ATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCG                     >  SRR4302540.3332849/1‑94 (MQ=60)
                                                                          ATGCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCG                     <  SRR4302540.7052256/94‑1 (MQ=60)
                                                                            GCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCT                   >  SRR4302540.8576205/1‑94 (MQ=60)
                                                                            GCGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCC                   <  SRR4302540.7014493/94‑1 (MQ=60)
                                                                             CGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCT                  >  SRR4302540.7877561/1‑94 (MQ=60)
                                                                             CGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCT                  <  SRR4302540.9781696/94‑1 (MQ=60)
                                                                             CGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCT                  >  SRR4302540.3817509/1‑94 (MQ=60)
                                                                             CGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCT                  <  SRR4302540.9781695/94‑1 (MQ=60)
                                                                             CGGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCT                  >  SRR4302540.7877560/1‑94 (MQ=60)
                                                                              GGATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTT                 <  SRR4302540.2306388/94‑1 (MQ=60)
                                                                               GATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTC                >  SRR4302540.7825024/1‑94 (MQ=60)
                                                                                ATAAAGCGCGTAGCTCTGGACCACCAGCGCAAGCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCT               <  SRR4302540.671239/94‑1 (MQ=60)
                                                                                ATAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCT               >  SRR4302540.5079741/1‑94 (MQ=60)
                                                                                 TAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTG              >  SRR4302540.9483663/1‑94 (MQ=60)
                                                                                 TAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTG              <  SRR4302540.6482068/94‑1 (MQ=60)
                                                                                 TAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTG              <  SRR4302540.4907182/94‑1 (MQ=60)
                                                                                 TAAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTG              >  SRR4302540.2747017/1‑94 (MQ=60)
                                                                                  AAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGT             >  SRR4302540.3972194/1‑94 (MQ=60)
                                                                                  AAAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGT             >  SRR4302540.2969426/1‑94 (MQ=60)
                                                                                   AAGCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTC            <  SRR4302540.8902998/94‑1 (MQ=60)
                                                                                     GCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCAC          >  SRR4302540.1224424/1‑94 (MQ=60)
                                                                                     GCGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCAC          <  SRR4302540.3182733/94‑1 (MQ=60)
                                                                                      CGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACC         >  SRR4302540.8390939/1‑94 (MQ=60)
                                                                                      CGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACC         >  SRR4302540.6864024/1‑94 (MQ=60)
                                                                                      CGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACC         >  SRR4302540.1343037/1‑94 (MQ=60)
                                                                                      CGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACC         >  SRR4302540.744876/1‑94 (MQ=60)
                                                                                      CGCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACC         >  SRR4302540.362538/1‑94 (MQ=60)
                                                                                       GCGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCC        <  SRR4302540.9359234/94‑1 (MQ=60)
                                                                                        CGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCG       >  SRR4302540.2808986/1‑94 (MQ=60)
                                                                                        CGTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCG       >  SRR4302540.5853758/1‑94 (MQ=60)
                                                                                         GTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGC      >  SRR4302540.1701685/1‑94 (MQ=60)
                                                                                         GTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGC      >  SRR4302540.8944014/1‑94 (MQ=60)
                                                                                         GTAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGC      >  SRR4302540.3208077/1‑94 (MQ=60)
                                                                                          TAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCT     <  SRR4302540.6014678/94‑1 (MQ=60)
                                                                                          TAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCT     >  SRR4302540.6705510/1‑94 (MQ=60)
                                                                                          TAGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCT     <  SRR4302540.10087455/94‑1 (MQ=60)
                                                                                           AGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTC    >  SRR4302540.1759182/1‑94 (MQ=60)
                                                                                           AGCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTC    >  SRR4302540.7468268/1‑94 (MQ=60)
                                                                                            GCTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCC   <  SRR4302540.1683441/94‑1 (MQ=60)
                                                                                             CTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCA  <  SRR4302540.6289245/94‑1 (MQ=60)
                                                                                             CTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCA  >  SRR4302540.42514/1‑94 (MQ=60)
                                                                                             CTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCA  >  SRR4302540.7262744/1‑94 (MQ=60)
                                                                                             |                                                                                             
ACGCGCTCGGCAATTTGCTGCTTGCCCATGCCGCGAATTTTCAGCCCCCACGCCATGTTTTCTTCGACACTCATATGCGGATAAAGCGCGTAGTTCTGGAACACCATCGCAATCCCGCGATCTTTTGGCTCCATTTCAGTCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCA  >  NC_000913/3586468‑3586654

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑