Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,588,897	A→G	Y354H (TAT→CAT)	ugpB ←	UgpB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,588,897	0	A	G	100.0%	1251.6 / NA	381	Y354H (TAT→CAT)	ugpB	UgpB
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (213/168); total (213/168)

Only 100 of 389 total aligned reads displayed.

CGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATACGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCA  >  NC_000913/3588808‑3588986

cggcaacggcGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATgcgc                                                                                        >  2:3525743/1‑93 (MQ=255)

 ggcaacggcGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCgct                                                                                       <  1:7419554/93‑1 (MQ=255)

  gcaacggcGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCgctg                                                                                      >  1:2497452/1‑93 (MQ=255)

    aacggcGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCgctgct                                                                                    <  2:2955274/93‑1 (MQ=255)

     acggcGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGACCTGCTCACGGGTCAGGGCATGCGCTGCtt                                                                                   >  2:4388406/1‑93 (MQ=255)

       ggcggcTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTg                                                                                 <  1:74494/93‑1 (MQ=255)

         cggcTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGt                                                                               <  1:988884/93‑1 (MQ=255)

         cggcTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGt                                                                               >  2:2411940/1‑93 (MQ=255)

         cggcTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGt                                                                               >  1:7751907/1‑93 (MQ=255)

           gcTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGa                                                                             <  1:2389643/93‑1 (MQ=255)

           gcTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGa                                                                             >  2:6699281/1‑93 (MQ=255)

            cTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGAt                                                                            <  2:22170/93‑1 (MQ=255)

            cTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGAt                                                                            <  1:793338/93‑1 (MQ=255)

            cTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGAt                                                                            >  1:4519842/1‑93 (MQ=255)

             ttATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGTCCTGCTCACGGGTCAGGTCATGCGCTGCTTTCGTGAtt                                                                           >  2:92195/1‑93 (MQ=255)

               aTTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTgg                                                                         >  1:4838910/1‑93 (MQ=255)

               aTTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTgg                                                                         >  1:4946416/1‑93 (MQ=255)

                ttCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGc                                                                        >  2:8524718/1‑93 (MQ=255)

                ttCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGc                                                                        >  1:5386256/1‑93 (MQ=255)

                ttCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGc                                                                        <  2:8784584/93‑1 (MQ=255)

                ttCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGAGGTGCTTTGGTGATTGGc                                                                        >  2:8228571/1‑93 (MQ=255)

                ttCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGATTTTCTCATAAAAGCCCTGCTCACCGGGCAGGTCATGCGCTGCTTTGGTGATTGGc                                                                        >  1:663880/1‑93 (MQ=255)

                 tCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCa                                                                       <  1:4694608/93‑1 (MQ=255)

                 tCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTGGGTGATTGGCa                                                                       <  1:8858424/93‑1 (MQ=255)

                      aTCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATaa                                                                  >  1:1687271/1‑93 (MQ=255)

                       tCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAAc                                                                 >  2:10022495/1‑93 (MQ=255)

                       tCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAAc                                                                 >  2:5869344/1‑93 (MQ=255)

                       tCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGACCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATCAc                                                                 >  2:8142807/1‑93 (MQ=255)

                        cTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAAcg                                                                >  2:1638174/1‑92 (MQ=255)

                        cTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAAcc                                                                <  1:5184364/93‑1 (MQ=255)

                        cTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAAcc                                                                <  2:3210204/93‑1 (MQ=255)

                        cTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAAcc                                                                >  2:2548888/1‑93 (MQ=255)

                         tGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCg                                                               >  1:4099095/1‑93 (MQ=255)

                         tGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCg                                                               >  2:3694510/1‑93 (MQ=255)

                         tGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCg                                                               <  1:3258543/93‑1 (MQ=255)

                         cgccgcgCCGCGGTACCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCg                                                               <  2:6333987/90‑1 (MQ=255)

                          gACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCgg                                                              >  2:785293/1‑93 (MQ=255)

                          gACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCgg                                                              <  1:8188300/93‑1 (MQ=255)

                           aCGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGt                                                             >  1:4310568/1‑93 (MQ=255)

                             gcgTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGttt                                                           <  1:5641885/93‑1 (MQ=255)

                               gTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTc                                                         >  2:4198347/1‑93 (MQ=255)

                               gTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTc                                                         <  2:5087796/93‑1 (MQ=255)

                               gTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTCTGGTGATTGGCAGATAACCGGGTTTc                                                         >  2:1463401/1‑93 (MQ=255)

                                tCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCt                                                        >  1:7142458/1‑93 (MQ=255)

                                  gcgGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGa                                                      <  2:7505703/93‑1 (MQ=255)

                                  gcgGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGa                                                      <  1:6101213/93‑1 (MQ=255)

                                   cgGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGAt                                                     <  2:1213528/93‑1 (MQ=255)

                                       aTCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCa                                                 >  1:1415532/1‑93 (MQ=255)

                                         ccGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACt                                               >  1:6506482/1‑93 (MQ=255)

                                          cGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTc                                              <  1:2003216/93‑1 (MQ=255)

                                          cGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTc                                              <  1:932582/93‑1 (MQ=255)

                                          cGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTc                                              <  1:102118/93‑1 (MQ=255)

                                            ccccTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCgg                                            >  1:5923341/1‑93 (MQ=255)

                                             cccTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGc                                           <  2:3054860/93‑1 (MQ=255)

                                              ccTGGGTTTTTCTCATAAAAGCCCTGCTCGCGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCa                                          <  1:5041844/93‑1 (MQ=255)

                                              ccTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCa                                          >  1:2186248/1‑93 (MQ=255)

                                              ccTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCa                                          >  2:543900/1‑93 (MQ=255)

                                               cTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAg                                         >  2:70454/1‑93 (MQ=255)

                                                 gggTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCg                                       >  2:8369214/1‑93 (MQ=255)

                                                  ggTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGt                                      >  1:2598272/1‑93 (MQ=255)

                                                  ggTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGt                                      <  2:6515426/93‑1 (MQ=255)

                                                   gTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGtt                                     >  1:1626429/1‑93 (MQ=255)

                                                   gTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGtt                                     >  1:5551529/1‑93 (MQ=255)

                                                    tttttCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGttt                                    >  1:69655/1‑93 (MQ=255)

                                                    tttttCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGttt                                    <  2:3614607/93‑1 (MQ=255)

                                                     ttttCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGtttt                                   >  2:7648539/1‑93 (MQ=255)

                                                     ttttCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGtttt                                   >  2:7765740/1‑93 (MQ=255)

                                                       ttCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCt                                 >  1:9500330/1‑93 (MQ=255)

                                                        tctcATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTg                                >  1:893998/1‑93 (MQ=255)

                                                        tctcATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCCGCAGCGTTTTCTg                                >  1:1548007/1‑93 (MQ=255)

                                                         ctcATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTgg                               >  1:9419778/1‑93 (MQ=255)

                                                         ctcATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTgg                               >  2:7278642/1‑93 (MQ=255)

                                                         ctcATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTgg                               >  1:9747737/1‑93 (MQ=255)

                                                           cATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCt                             <  2:2822126/93‑1 (MQ=255)

                                                             tAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTc                           >  2:2295998/1‑93 (MQ=255)

                                                             tAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTc                           <  2:2380247/93‑1 (MQ=255)

                                                              aaaaGCCCTGCTCACGGGGCAGGGCATGCGCCGCTTTGGTGATTTGCAGATAACCGGGTTTCTGATGCCACTCCGCAGCGTTTTCTGGCtttg                          >  2:7908878/1‑91 (MQ=255)

                                                               aaaGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTcgc                         >  1:8495288/1‑93 (MQ=255)

                                                                 aGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGa                       <  2:927874/93‑1 (MQ=255)

                                                                 aGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGa                       >  2:832961/1‑93 (MQ=255)

                                                                 aGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGa                       <  2:9813391/93‑1 (MQ=255)

                                                                   cccTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAgg                     <  1:6835902/93‑1 (MQ=255)

                                                                     cTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGaa                   >  2:7338168/1‑93 (MQ=255)

                                                                      tGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGaaa                  <  2:9520667/93‑1 (MQ=255)

                                                                         tCACGGGTCAGGTCATGCGCTGCTTGGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCg               <  2:4838909/93‑1 (MQ=255)

                                                                          cACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCgg              >  2:1984675/1‑92 (MQ=255)

                                                                           ccGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAg             <  1:2742804/92‑1 (MQ=255)

                                                                           aCGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAg             >  2:4644318/1‑93 (MQ=255)

                                                                             gggTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGa           <  1:3527138/93‑1 (MQ=255)

                                                                              ggtcaggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGGTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGaa          >  2:9913714/1‑93 (MQ=255)

                                                                                tcaggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACt        >  1:3711787/1‑93 (MQ=255)

                                                                                 caggtcaTGCGCTGCTTTGGTGATTTGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACtt       <  2:4498806/93‑1 (MQ=255)

                                                                                  aggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGGACTTc      >  2:905150/1‑93 (MQ=255)

                                                                                  aggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTc      <  2:5633667/93‑1 (MQ=255)

                                                                                  aggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTc      >  1:1488322/1‑93 (MQ=255)

                                                                                   ggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGGAATCGAGGAACTTCg     >  1:5731536/1‑93 (MQ=255)

                                                                                   ggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCg     >  2:386181/1‑93 (MQ=255)

                                                                                    gtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGc    >  1:296108/1‑93 (MQ=255)

                                                                                     tcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGcc   >  2:6927373/1‑93 (MQ=255)

                                                                                      caTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCca  >  1:8130778/1‑93 (MQ=255)

CGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATACGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCA  >  NC_000913/3588808‑3588986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 209 total aligned reads displayed.

TGAACGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATACGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCACA  >  NC_000913/3588804‑3588988

TGAACGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATG                                                                                             <  SRR4302540.3470106/94‑1 (MQ=60)

 GAACGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGC                                                                                            >  SRR4302540.7731371/1‑94 (MQ=60)

 GAACGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGC                                                                                            <  SRR4302540.6554452/94‑1 (MQ=60)

 GAACGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGC                                                                                            <  SRR4302540.6675722/94‑1 (MQ=60)

 GAACGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGC                                                                                            >  SRR4302540.7275741/1‑94 (MQ=60)

 GAACGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGC                                                                                            <  SRR4302540.5629263/94‑1 (MQ=60)

 GAACGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGC                                                                                            <  SRR4302540.8380337/94‑1 (MQ=60)

 GAACGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGC                                                                                            <  SRR4302540.8548151/94‑1 (MQ=60)

 GAACGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGC                                                                                            >  SRR4302540.8793617/1‑94 (MQ=60)

     GGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTG                                                                                        >  SRR4302540.2524377/1‑94 (MQ=60)

     GGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTG                                                                                        <  SRR4302540.7502193/94‑1 (MQ=60)

       CAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCT                                                                                      <  SRR4302540.1296012/94‑1 (MQ=60)

         ACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTT                                                                                    <  SRR4302540.7541968/94‑1 (MQ=60)

         ACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTT                                                                                    >  SRR4302540.2116358/1‑94 (MQ=60)

         ACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTT                                                                                    >  SRR4302540.6517711/1‑94 (MQ=60)

         ACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTT                                                                                    <  SRR4302540.1682786/94‑1 (MQ=60)

         ACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTT                                                                                    <  SRR4302540.9648613/94‑1 (MQ=60)

          CGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCTCTGCTCACGGGTCAGGTCATGCGCTGCTTTG                                                                                   >  SRR4302540.8477772/1‑94 (MQ=60)

          CGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTG                                                                                   <  SRR4302540.4884511/94‑1 (MQ=60)

           GGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGG                                                                                  >  SRR4302540.10100131/1‑94 (MQ=60)

           GGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGG                                                                                  <  SRR4302540.5469114/94‑1 (MQ=60)

           GGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGG                                                                                  >  SRR4302540.2733416/1‑94 (MQ=60)

           GGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGG                                                                                  <  SRR4302540.7516450/94‑1 (MQ=60)

           GGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGG                                                                                  <  SRR4302540.75265/94‑1 (MQ=60)

            GCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGT                                                                                 >  SRR4302540.7842439/1‑94 (MQ=60)

            GCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGT                                                                                 <  SRR4302540.4589469/94‑1 (MQ=60)

             CGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTG                                                                                <  SRR4302540.1980480/94‑1 (MQ=60)

              GGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGA                                                                               >  SRR4302540.7530540/1‑94 (MQ=60)

              GGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTCCTTTGGTGA                                                                               >  SRR4302540.5587894/1‑94 (MQ=60)

               GCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGAT                                                                              <  SRR4302540.5847187/94‑1 (MQ=60)

               GCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGAT                                                                              <  SRR4302540.4578272/94‑1 (MQ=60)

               GCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGAT                                                                              <  SRR4302540.2415400/94‑1 (MQ=60)

               GCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGAT                                                                              >  SRR4302540.4568792/1‑94 (MQ=60)

                GTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATT                                                                             <  SRR4302540.4996770/94‑1 (MQ=60)

                CTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATT                                                                             <  SRR4302540.2246779/94‑1 (MQ=60)

                CTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATT                                                                             <  SRR4302540.801759/94‑1 (MQ=60)

                CTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATT                                                                             <  SRR4302540.2922004/94‑1 (MQ=60)

                CTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATT                                                                             <  SRR4302540.801758/94‑1 (MQ=60)

                 TTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTG                                                                            >  SRR4302540.730597/1‑94 (MQ=60)

                 TTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTG                                                                            <  SRR4302540.9957611/94‑1 (MQ=60)

                 TTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTG                                                                            >  SRR4302540.2655054/1‑94 (MQ=60)

                  TATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGG                                                                           >  SRR4302540.4890742/1‑94 (MQ=60)

                  TATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGG                                                                           >  SRR4302540.4890743/1‑94 (MQ=60)

                  TATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGG                                                                           >  SRR4302540.4999820/1‑94 (MQ=60)

                   ATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGC                                                                          >  SRR4302540.5445497/1‑94 (MQ=60)

                   ATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGATTTTCTCATAAAAGCCCTGCTCACCGGGCAGGTCATGCGCTGCTTTGGTGATTGGC                                                                          >  SRR4302540.671001/1‑94 (MQ=60)

                     TCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAG                                                                        <  SRR4302540.5042508/94‑1 (MQ=60)

                     TCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAG                                                                        <  SRR4302540.4744796/94‑1 (MQ=60)

                     TCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAG                                                                        <  SRR4302540.8602143/94‑1 (MQ=60)

                     TCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTGGGTGATTGGCAG                                                                        <  SRR4302540.8960927/94‑1 (MQ=60)

                       AGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGAT                                                                      <  SRR4302540.7243036/94‑1 (MQ=60)

                       AGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGAT                                                                      >  SRR4302540.6866088/1‑94 (MQ=60)

                       AGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGAT                                                                      >  SRR4302540.4084602/1‑94 (MQ=60)

                       AGCATCTGACGCGTCGCGGTATCCGACCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGAT                                                                      <  SRR4302540.9529586/94‑1 (MQ=60)

                         CATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAA                                                                    >  SRR4302540.1705571/1‑94 (MQ=60)

                         CATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAA                                                                    <  SRR4302540.2580764/94‑1 (MQ=60)

                          ATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAAC                                                                   >  SRR4302540.9104802/1‑94 (MQ=60)

                          ATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAAC                                                                   >  SRR4302540.155273/1‑94 (MQ=60)

                            CTGGCGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCG                                                                 <  SRR4302540.2176555/94‑1 (MQ=60)

                            CTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCG                                                                 <  SRR4302540.5240802/94‑1 (MQ=60)

                            CTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCG                                                                 <  SRR4302540.3728862/94‑1 (MQ=60)

                            CTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCG                                                                 <  SRR4302540.9688873/94‑1 (MQ=60)

                             TGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGG                                                                <  SRR4302540.3294076/94‑1 (MQ=60)

                              GACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGT                                                               <  SRR4302540.8283433/94‑1 (MQ=60)

                              GACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGT                                                               >  SRR4302540.8199700/1‑94 (MQ=60)

                              GACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGT                                                               >  SRR4302540.4357491/1‑94 (MQ=60)

                              GACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGT                                                               >  SRR4302540.1593336/1‑94 (MQ=60)

                               ACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTT                                                              <  SRR4302540.702054/94‑1 (MQ=60)

                               ACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTT                                                              <  SRR4302540.9457723/94‑1 (MQ=60)

                                 GCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTT                                                            <  SRR4302540.5703979/94‑1 (MQ=60)

                                   GTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCT                                                          >  SRR4302540.7222032/1‑94 (MQ=60)

                                   GTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCT                                                          <  SRR4302540.9630865/94‑1 (MQ=60)

                                     CGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGA                                                        >  SRR4302540.4962163/1‑94 (MQ=60)

                                     CGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGA                                                        >  SRR4302540.510258/1‑94 (MQ=60)

                                     CGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGA                                                        <  SRR4302540.4543278/94‑1 (MQ=60)

                                     CGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGA                                                        >  SRR4302540.3390453/1‑94 (MQ=60)

                                      TCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGAT                                                       <  SRR4302540.7503603/94‑1 (MQ=60)

                                      GCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGAT                                                       <  SRR4302540.1697913/94‑1 (MQ=60)

                                      GCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGAT                                                       <  SRR4302540.6169144/94‑1 (MQ=60)

                                       CGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATG                                                      >  SRR4302540.989002/1‑94 (MQ=60)

                                       CGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATG                                                      <  SRR4302540.4270667/94‑1 (MQ=60)

                                       CGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATG                                                      >  SRR4302540.5169576/1‑94 (MQ=60)

                                        GGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGC                                                     <  SRR4302540.5766679/94‑1 (MQ=60)

                                         GTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCC                                                    >  SRR4302540.3444850/1‑94 (MQ=60)

                                          TATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGCTGCCC                                                   >  SRR4302540.1430813/1‑94 (MQ=60)

                                          TATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCA                                                   >  SRR4302540.1430812/1‑94 (MQ=60)

                                           ATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCAC                                                  >  SRR4302540.6641763/1‑94 (MQ=60)

                                           ATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCAC                                                  >  SRR4302540.3277282/1‑94 (MQ=60)

                                           ATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCAC                                                  >  SRR4302540.3409679/1‑94 (MQ=60)

                                            TCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACT                                                 >  SRR4302540.6578793/1‑94 (MQ=60)

                                              CGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCG                                               <  SRR4302540.2024901/94‑1 (MQ=60)

                                              CGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCG                                               <  SRR4302540.942375/94‑1 (MQ=60)

                                              CGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCG                                               <  SRR4302540.103208/94‑1 (MQ=60)

                                               GCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGG                                              >  SRR4302540.1565408/1‑94 (MQ=60)

                                               GCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGG                                              >  SRR4302540.5988787/1‑94 (MQ=60)

                                               GCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGG                                              >  SRR4302540.5649765/1‑94 (MQ=60)

                                               CCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAAGTCATGCGCTGCTTTGGTGATTGTCAGATAACCGGTTTTCTGATGCCACTCGG                                              <  SRR4302540.7901193/94‑1 (MQ=60)

                                                CCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGC                                             <  SRR4302540.1268497/94‑1 (MQ=60)

                                                 CCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGTCAGATAACCGGTTTTCTGATGCCACTCGGCA                                            >  SRR4302540.5992184/1‑94 (MQ=60)

                                                 CCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCA                                            >  SRR4302540.5992186/1‑94 (MQ=60)

                                                 CCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCA                                            <  SRR4302540.6711253/94‑1 (MQ=60)

                                                 CCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCA                                            >  SRR4302540.2209849/1‑94 (MQ=60)

                                                  CCTGGGTTTTTCTCATAAAAGCCCTGCTCGCGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAG                                           <  SRR4302540.5096380/94‑1 (MQ=60)

                                                  CCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAG                                           >  SRR4302540.5776600/1‑94 (MQ=60)

                                                  CCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAG                                           >  SRR4302540.2837430/1‑94 (MQ=60)

                                                  CCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAG                                           <  SRR4302540.6786426/94‑1 (MQ=60)

                                                  CCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAG                                           <  SRR4302540.8063008/94‑1 (MQ=60)

                                                  CCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAG                                           <  SRR4302540.6786427/94‑1 (MQ=60)

                                                  CCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAG                                           >  SRR4302540.5327345/1‑94 (MQ=60)

                                                  CCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTCCTTCGCTTATTGGCAGCTAACTGGGTTTCTGATGCCAttcatcag                                           >  SRR4302540.9730358/1‑86 (MQ=50)

                                                    TGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCG                                         >  SRR4302540.2486364/1‑94 (MQ=60)

                                                    TGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCG                                         >  SRR4302540.8928469/1‑94 (MQ=60)

                                                    TGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGACACTCGGCAGCG                                         >  SRR4302540.9559039/1‑94 (MQ=60)

                                                     GGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGT                                        >  SRR4302540.3196146/1‑94 (MQ=60)

                                                     GGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGT                                        >  SRR4302540.2626291/1‑94 (MQ=60)

                                                      GGTTTTTGTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGAGGCCACTCGGCAGCGTT                                       <  SRR4302540.5688249/94‑1 (MQ=60)

                                                      GGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTT                                       <  SRR4302540.9019329/94‑1 (MQ=60)

                                                      GGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTT                                       >  SRR4302540.1644241/1‑94 (MQ=60)

                                                      GGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTT                                       <  SRR4302540.5688252/94‑1 (MQ=60)

                                                      GGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTT                                       >  SRR4302540.5612684/1‑94 (MQ=60)

                                                      GGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTT                                       <  SRR4302540.9446095/94‑1 (MQ=60)

                                                       GTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTT                                      >  SRR4302540.70357/1‑94 (MQ=60)

                                                        TTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTT                                     <  SRR4302540.5025176/94‑1 (MQ=60)

                                                        TTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTT                                     >  SRR4302540.1652439/1‑94 (MQ=60)

                                                        TTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTT                                     >  SRR4302540.5400175/1‑94 (MQ=60)

                                                         TTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTC                                    >  SRR4302540.915780/1‑94 (MQ=60)

                                                          TTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCT                                   >  SRR4302540.6074127/1‑94 (MQ=60)

                                                          TTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCT                                   <  SRR4302540.7096497/94‑1 (MQ=60)

                                                          TTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCT                                   <  SRR4302540.2497227/94‑1 (MQ=60)

                                                          TTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCT                                   >  SRR4302540.9612907/1‑94 (MQ=60)

                                                          TTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCT                                   <  SRR4302540.6941754/94‑1 (MQ=60)

                                                          TTTCTCATAAAAGAACTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGGAGATAACCGGTGTTCTGATGCCACTCGGCAGCGTTTTTT                                   >  SRR4302540.6074128/1‑94 (MQ=60)

                                                           TTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTG                                  >  SRR4302540.903497/1‑94 (MQ=60)

                                                           TTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTG                                  >  SRR4302540.903495/1‑94 (MQ=60)

                                                           TTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTG                                  <  SRR4302540.8904213/94‑1 (MQ=60)

                                                           TTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTG                                  >  SRR4302540.3674069/1‑94 (MQ=60)

                                                           TTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCCGCAGCGTTTTCTG                                  >  SRR4302540.1565078/1‑94 (MQ=60)

                                                            TCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGG                                 >  SRR4302540.9531744/1‑94 (MQ=60)

                                                            TCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGG                                 >  SRR4302540.9862133/1‑94 (MQ=60)

                                                            TCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGG                                 >  SRR4302540.2191198/1‑94 (MQ=60)

                                                            TCTCATAAAAGCCCTGCTCACGGGTCAGGCCATGCGCTGCTTTGGTGCGTGGCAGCTAACCGTTGTTCCGATGCCACTCGcgaccgttttttgg                                 >  SRR4302540.2190934/1‑80 (MQ=39)

                                                               CATAAAAGCCCTGCTCACGGCTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTT                              >  SRR4302540.8234733/1‑94 (MQ=60)

                                                                ATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTC                             >  SRR4302540.8405833/1‑94 (MQ=60)

                                                                ATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTC                             >  SRR4302540.3815198/1‑94 (MQ=60)

                                                                 TAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCG                            <  SRR4302540.3821311/94‑1 (MQ=60)

                                                                 TAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCG                            >  SRR4302540.5309732/1‑94 (MQ=60)

                                                                  AAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGC                           >  SRR4302540.8594004/1‑94 (MQ=60)

                                                                   AAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCG                          >  SRR4302540.1719501/1‑94 (MQ=60)

                                                                     agcgcttctgtCGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAG                        <  SRR4302540.6543711/83‑1 (MQ=60)

                                                                      GCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGG                       <  SRR4302540.7196988/94‑1 (MQ=60)

                                                                       CCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGA                      <  SRR4302540.6911617/94‑1 (MQ=60)

                                                                       CCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGA                      >  SRR4302540.1559922/1‑94 (MQ=60)

                                                                       CCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGA                      >  SRR4302540.6612984/1‑94 (MQ=60)

                                                                        CCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAA                     >  SRR4302540.6184105/1‑94 (MQ=60)

                                                                        CCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAA                     >  SRR4302540.9557716/1‑94 (MQ=60)

                                                                        CCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAA                     >  SRR4302540.4822610/1‑94 (MQ=60)

                                                                         CTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAT                    >  SRR4302540.8117971/1‑94 (MQ=60)

                                                                         CTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAA                    >  SRR4302540.5191287/1‑94 (MQ=60)

                                                                         CTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAA                    >  SRR4302540.1456111/1‑94 (MQ=60)

                                                                          TGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAAT                   <  SRR4302540.2300832/94‑1 (MQ=60)

                                                                           GCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATC                  <  SRR4302540.7460946/94‑1 (MQ=60)

                                                                           GCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATC                  <  SRR4302540.577433/94‑1 (MQ=60)

                                                                            CTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCG                 <  SRR4302540.6507114/94‑1 (MQ=60)

                                                                            CTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCG                 <  SRR4302540.1600152/94‑1 (MQ=60)

                                                                            CTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCG                 >  SRR4302540.2889319/1‑94 (MQ=60)

                                                                             TCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGA                <  SRR4302540.8275188/94‑1 (MQ=60)

                                                                              CACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAG               <  SRR4302540.8227041/94‑1 (MQ=60)

                                                                              CACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAG               <  SRR4302540.4314303/94‑1 (MQ=60)

                                                                                CGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGA             <  SRR4302540.9867102/94‑1 (MQ=60)

                                                                                CGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGA             <  SRR4302540.2426479/94‑1 (MQ=60)

                                                                                CGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGA             <  SRR4302540.320257/94‑1 (MQ=60)

                                                                                 GGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAA            <  SRR4302540.3565605/94‑1 (MQ=60)

                                                                                  GGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAAC           <  SRR4302540.3573734/94‑1 (MQ=60)

                                                                                  GGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAAC           >  SRR4302540.7086707/1‑94 (MQ=60)

                                                                                   GTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACT          >  SRR4302540.3752293/1‑94 (MQ=60)

                                                                                    TCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTT         <  SRR4302540.8326834/94‑1 (MQ=60)

                                                                                     CAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTC        >  SRR4302540.1504675/1‑94 (MQ=60)

                                                                                     CAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTC        >  SRR4302540.4819145/1‑94 (MQ=60)

                                                                                     CAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTC        <  SRR4302540.2735739/94‑1 (MQ=60)

                                                                                     CAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTC        >  SRR4302540.1504674/1‑94 (MQ=60)

                                                                                      AGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGGAATCGAGGAACTTCG       >  SRR4302540.5794656/1‑94 (MQ=60)

                                                                                      AGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCG       <  SRR4302540.4367105/94‑1 (MQ=60)

                                                                                      AGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGGTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCC       >  SRR4302540.156254/1‑94 (MQ=60)

                                                                                       GGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGC      >  SRR4302540.5515260/1‑94 (MQ=60)

                                                                                       GGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGC      >  SRR4302540.299038/1‑94 (MQ=60)

                                                                                       GGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGC      >  SRR4302540.4315847/1‑94 (MQ=60)

                                                                                        GTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGTGGAAATCGAGGAACTTCGCC     <  SRR4302540.2372479/94‑1 (MQ=60)

                                                                                        GTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCC     <  SRR4302540.2597424/94‑1 (MQ=60)

                                                                                        GTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCC     >  SRR4302540.4511740/1‑94 (MQ=60)

                                                                                        GTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCC     <  SRR4302540.9311177/94‑1 (MQ=60)

                                                                                         TCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCC    >  SRR4302540.7574305/1‑94 (MQ=60)

                                                                                         TCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCA    >  SRR4302540.8225153/1‑94 (MQ=60)

                                                                                          CATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCAC   >  SRR4302540.3088651/1‑94 (MQ=60)

                                                                                          CATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCAC   >  SRR4302540.7625926/1‑94 (MQ=60)

                                                                                           ATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCACA  >  SRR4302540.4245512/1‑94 (MQ=60)

                                                                                           ATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCACA  >  SRR4302540.2167926/1‑94 (MQ=60)

                                                                                           ATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCACA  >  SRR4302540.6232269/1‑94 (MQ=60)

                                                                                           ATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCACA  >  SRR4302540.3024462/1‑94 (MQ=60)

                                                                                           ATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCACA  >  SRR4302540.1705542/1‑94 (MQ=60)

                                                                                           ATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCACA  <  SRR4302540.8045686/94‑1 (MQ=60)

TGAACGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATACGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCACA  >  NC_000913/3588804‑3588988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`