Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,596,295 A→G V332A (GTG→GCG)  b3460 ← LivJ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,596,2950AG99.8% 1504.8 / ‑5.6 466V332A (GTG→GCG) b3460LivJ
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (200/264);  total (200/266)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01

Only 100 of 489 total aligned reads displayed.

GTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCACGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTG  >  NC_000913/3596205‑3596384
                                                                                          |                                                                                         
gtgccgtTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCcgcg                                                                                         >  1:8382750/1‑93 (MQ=255)
gtgccgtTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCcgcg                                                                                         >  1:6023277/1‑93 (MQ=255)
 tgccgtTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCgg                                                                                        >  2:1012044/1‑93 (MQ=255)
 tgccgtTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCACgg                                                                                        <  1:780476/93‑1 (MQ=255)
  gccgtTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGa                                                                                       <  1:2711641/93‑1 (MQ=255)
   ccgtTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAg                                                                                      >  2:384909/1‑93 (MQ=255)
   ccgtTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAg                                                                                      <  2:1538564/93‑1 (MQ=255)
   ccgtTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAg                                                                                      <  1:462668/93‑1 (MQ=255)
     gtTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTAACCgaggagat                                                                                    <  2:8988869/93‑3 (MQ=255)
      ttGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTc                                                                                   <  2:6424433/93‑1 (MQ=255)
      ttGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTc                                                                                   >  1:639671/1‑93 (MQ=255)
      ttGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTc                                                                                   >  1:6344420/1‑93 (MQ=255)
        ggCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGc                                                                                 <  1:115174/93‑1 (MQ=255)
        ggCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGc                                                                                 <  2:6550468/93‑1 (MQ=255)
        gccGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGc                                                                                 <  2:1286152/91‑1 (MQ=255)
         gCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCt                                                                                <  2:1750505/93‑1 (MQ=255)
           gTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCTTTACGGTATCCGCGGAGTTCGCttt                                                                              >  1:7504731/1‑93 (MQ=255)
           gTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCttt                                                                              <  2:73113/93‑1 (MQ=255)
            tGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTc                                                                             >  1:7129249/1‑93 (MQ=255)
             gCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCa                                                                            >  2:2741487/1‑93 (MQ=255)
             gCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCa                                                                            <  2:5337895/93‑1 (MQ=255)
               cAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAgg                                                                          >  1:5044549/1‑93 (MQ=255)
                 gTCAAATACGCCGACCAGAAAACCATTCAGATCGCCTTTCTCATCAAAGCTCAGCGGTCCTAATGCGGTACCCACGCAGTTTGGTTTAAGGTa                                                                        <  2:7495449/93‑1 (MQ=255)
                 gTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTa                                                                        >  2:8545239/1‑93 (MQ=255)
                  tCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTAt                                                                       >  2:4777465/1‑93 (MQ=255)
                   cAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTAtt                                                                      <  2:6301677/93‑1 (MQ=255)
                     aaTACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTg                                                                    >  1:5410465/1‑93 (MQ=255)
                       tACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGc                                                                  <  2:1976866/93‑1 (MQ=255)
                       tACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGc                                                                  <  1:4779210/93‑1 (MQ=255)
                       tACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGc                                                                  <  2:475093/93‑1 (MQ=255)
                        aCGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCg                                                                 >  2:7770554/1‑93 (MQ=255)
                         cGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGTGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGa                                                                <  2:9748356/93‑1 (MQ=255)
                           ccGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAtt                                                              <  2:4432000/93‑1 (MQ=255)
                           ccGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAtt                                                              <  2:8754425/93‑1 (MQ=255)
                            cGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAttt                                                             <  2:6008322/93‑1 (MQ=255)
                            cGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAttt                                                             >  2:1794816/1‑93 (MQ=255)
                             gAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTc                                                            >  2:322971/1‑93 (MQ=255)
                              aaCTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCATGTATTTGGCGATTTCa                                                           <  2:6708028/93‑1 (MQ=255)
                              aaCTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCa                                                           <  2:9103668/93‑1 (MQ=255)
                              aaCTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCa                                                           >  1:8499294/1‑93 (MQ=255)
                              aaCTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCa                                                           <  1:23478/93‑1 (MQ=255)
                               aCTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAg                                                          >  2:4979304/1‑93 (MQ=255)
                                cTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGc                                                         >  1:65487/1‑93 (MQ=255)
                                cTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGc                                                         <  1:9736432/93‑1 (MQ=255)
                                 tCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGcc                                                        >  1:2587287/1‑93 (MQ=255)
                                 tCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGcc                                                        <  2:2584272/93‑1 (MQ=255)
                                  cAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCg                                                       >  1:2519770/1‑93 (MQ=255)
                                  cAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCg                                                       <  1:10039103/93‑1 (MQ=255)
                                       ccTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCTGGTATTTGGCGATTTCAGCCGGATCg                                                  >  1:8271349/1‑93 (MQ=255)
                                        cTTTCAGATCGCCTTCCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGt                                                 <  2:2457745/93‑1 (MQ=255)
                                          ttCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCa                                               <  1:3113280/93‑1 (MQ=255)
                                          ttCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCa                                               >  1:5608182/1‑93 (MQ=255)
                                          ttCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCa                                               <  2:7104423/93‑1 (MQ=255)
                                           tCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAg                                              <  2:5162440/93‑1 (MQ=255)
                                           tCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAg                                              <  1:9364681/93‑1 (MQ=255)
                                             aGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGAc                                            >  1:3423958/1‑93 (MQ=255)
                                              gATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACt                                           <  2:3555339/93‑1 (MQ=255)
                                              gATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACt                                           >  2:5599194/1‑93 (MQ=255)
                                               aTCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTGGCTTTCAGCTATTTGGCGATTTCAGCCGCATCGTCAGACTg                                          >  1:4486002/1‑93 (MQ=255)
                                                tCGCCTTTCTCATCCCAGATCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGa                                         <  2:5229647/93‑1 (MQ=255)
                                                 cGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGAt                                        <  2:8278233/93‑1 (MQ=255)
                                                 cGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGGTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGAt                                        >  1:9201335/1‑93 (MQ=255)
                                                   ccTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTc                                      >  1:3848304/1‑93 (MQ=255)
                                                     tttCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAg                                    <  2:5424260/93‑1 (MQ=255)
                                                        ctcATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGcc                                 <  2:4581685/93‑1 (MQ=255)
                                                         tcATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGccc                                <  2:1393572/93‑1 (MQ=255)
                                                           aTCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGc                              >  2:9363269/1‑93 (MQ=255)
                                                            tCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGcc                             >  2:864817/1‑93 (MQ=255)
                                                            tCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGcc                             <  2:5810230/93‑1 (MQ=255)
                                                            tCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGcc                             <  2:3752559/93‑1 (MQ=255)
                                                             cccAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCt                            <  2:6316590/93‑1 (MQ=255)
                                                             cccAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCt                            <  1:2221135/93‑1 (MQ=255)
                                                               cAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGc                          <  1:8025284/93‑1 (MQ=255)
                                                                aGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCa                         >  1:8651104/1‑93 (MQ=255)
                                                                 ggTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGcca                        >  2:8831913/1‑91 (MQ=255)
                                                                 ggTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCaa                        >  1:2095711/1‑93 (MQ=255)
                                                                 ggTCAGCGGTCCCATTACGGAATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGCCTGATTACGGGCCGCCTGCaa                        >  1:5741138/1‑93 (MQ=255)
                                                                    cAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGa                     <  1:6096874/93‑1 (MQ=255)
                                                                    cAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGa                     >  2:3349089/1‑93 (MQ=255)
                                                                     aGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGAt                    <  1:3344063/93‑1 (MQ=255)
                                                                      gCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGAtt                   <  2:2178478/93‑1 (MQ=255)
                                                                       ctgTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTAAGACTGATTCAGGCCCGCCTGCAAAGATTg                  <  1:7245850/91‑1 (MQ=255)
                                                                       cGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTg                  <  1:1524695/93‑1 (MQ=255)
                                                                        ggTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGc                 <  1:4056559/93‑1 (MQ=255)
                                                                         gTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCa                <  2:6928717/93‑1 (MQ=255)
                                                                            ccATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAgcg             >  2:9224724/1‑93 (MQ=255)
                                                                            ccATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAgcg             >  1:6905870/1‑93 (MQ=255)
                                                                              aTTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAACGATTGCAGctcg           >  2:953270/1‑93 (MQ=255)
                                                                              aTTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGcgcg           >  1:8698403/1‑93 (MQ=255)
                                                                              aTTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGcgcg           >  1:4232778/1‑93 (MQ=255)
                                                                               ttACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCgcgg          >  1:6711795/1‑93 (MQ=255)
                                                                               ttACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCgcgg          >  1:1825174/1‑93 (MQ=255)
                                                                                 aCGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCgcggcg        <  2:2915789/93‑1 (MQ=255)
                                                                                   ggTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTa      <  2:8036292/93‑1 (MQ=255)
                                                                                   ggTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTa      <  1:3532512/93‑1 (MQ=255)
                                                                                   ggTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTa      <  2:403039/93‑1 (MQ=255)
                                                                                    gTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAg     <  2:4240036/93‑1 (MQ=255)
                                                                                    gTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGCCCCCCCTGCAAAGATTGCATCGCGGCGTAg     >  1:1702744/1‑93 (MQ=255)
                                                                                     tATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAgg    <  1:7721207/93‑1 (MQ=255)
                                                                                       tCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAggtg  <  2:9674052/93‑1 (MQ=255)
                                                                                          |                                                                                         
GTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCACGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTG  >  NC_000913/3596205‑3596384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 238 total aligned reads displayed.
CGCCGTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCACGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGGTCC  >  NC_000913/3596201‑3596388
                                                                                              |                                                                                             
cgcgttgcgGTTGGCGTGCCAGT‑AAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCG                                                                                               <  SRR4302540.10367/85‑1 (MQ=60)
   CGTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCG                                                                                             >  SRR4302540.8480015/1‑94 (MQ=60)
   CGTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCG                                                                                             >  SRR4302540.6090103/1‑94 (MQ=60)
   CGTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCG                                                                                             >  SRR4302540.6090104/1‑94 (MQ=60)
   CGTGCCGTTGGCATGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCACGGTCCGCGGTCACATTCCGGTATCCGCG                                                                                             >  SRR4302540.8480016/1‑94 (MQ=60)
    GTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGG                                                                                            >  SRR4302540.4441565/1‑94 (MQ=60)
    GTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGGATCCGCGG                                                                                            >  SRR4302540.282345/1‑94 (MQ=60)
     TGCCGTTGGCGTGCCAGTCAAATGCGCCGAACTCAAAGCCTTTCAGATCGCCTTACTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGA                                                                                           <  SRR4302540.1895903/94‑1 (MQ=60)
     TGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAATCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGA                                                                                           <  SRR4302540.6375765/94‑1 (MQ=60)
     TGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGA                                                                                           >  SRR4302540.6505656/1‑94 (MQ=60)
     TGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCACGGA                                                                                           <  SRR4302540.788790/94‑1 (MQ=60)
      GCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAG                                                                                          <  SRR4302540.2740880/94‑1 (MQ=60)
      GCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAG                                                                                          >  SRR4302540.1723736/1‑94 (MQ=60)
      GCCGTGGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAG                                                                                          <  SRR4302540.2422885/94‑1 (MQ=60)
       CCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGT                                                                                         >  SRR4302540.6231239/1‑94 (MQ=60)
        CGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTT                                                                                        >  SRR4302540.6709624/1‑94 (MQ=60)
        CGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTT                                                                                        >  SRR4302540.8484323/1‑94 (MQ=60)
         GTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTC                                                                                       >  SRR4302540.646483/1‑94 (MQ=60)
         GTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTC                                                                                       >  SRR4302540.6415068/1‑94 (MQ=60)
         GTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTC                                                                                       <  SRR4302540.5821598/94‑1 (MQ=60)
         GTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTC                                                                                       <  SRR4302540.8716800/94‑1 (MQ=60)
         GTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTC                                                                                       <  SRR4302540.9313265/94‑1 (MQ=60)
         GTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTC                                                                                       <  SRR4302540.8716799/94‑1 (MQ=60)
          TTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCG                                                                                      >  SRR4302540.2230529/1‑94 (MQ=60)
          TTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCG                                                                                      >  SRR4302540.3458646/1‑94 (MQ=60)
           TGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGC                                                                                     >  SRR4302540.2030804/1‑94 (MQ=60)
            GGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCT                                                                                    <  SRR4302540.116403/94‑1 (MQ=60)
             GCGTGCCAGTCAAATGCGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTT                                                                                   <  SRR4302540.7219248/94‑1 (MQ=60)
             GCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTT                                                                                   <  SRR4302540.5292996/94‑1 (MQ=60)
             GCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTT                                                                                   <  SRR4302540.3501679/94‑1 (MQ=60)
             GCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTT                                                                                   <  SRR4302540.1549007/94‑1 (MQ=60)
              CGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCTTTACGGTATCCGCGGAGTTCGCTTT                                                                                  >  SRR4302540.7588608/1‑94 (MQ=60)
               GTTCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTC                                                                                 <  SRR4302540.2366091/94‑1 (MQ=60)
               GTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTC                                                                                 <  SRR4302540.7773064/94‑1 (MQ=60)
               GTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTC                                                                                 >  SRR4302540.7208662/1‑94 (MQ=60)
               GTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTC                                                                                 <  SRR4302540.2032972/94‑1 (MQ=60)
                 GCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAG                                                                               >  SRR4302540.120237/1‑94 (MQ=60)
                  CCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGG                                                                              >  SRR4302540.5099111/1‑94 (MQ=60)
                  CCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGG                                                                              >  SRR4302540.6538961/1‑94 (MQ=60)
                  CCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGG                                                                              >  SRR4302540.8046575/1‑94 (MQ=60)
                  CCAGGCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGG                                                                              <  SRR4302540.6590364/94‑1 (MQ=60)
                   CAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGT                                                                             <  SRR4302540.5864771/94‑1 (MQ=60)
                    AGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTA                                                                            >  SRR4302540.4049612/1‑94 (MQ=60)
                     GTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTAT                                                                           >  SRR4302540.4709815/1‑94 (MQ=60)
                       CAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTT                                                                         <  SRR4302540.9234011/94‑1 (MQ=60)
                       CAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTT                                                                         <  SRR4302540.8764712/94‑1 (MQ=60)
                       CAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTT                                                                         <  SRR4302540.8561199/94‑1 (MQ=60)
                       CAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTT                                                                         <  SRR4302540.4531546/94‑1 (MQ=60)
                       CAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTT                                                                         <  SRR4302540.4609762/94‑1 (MQ=60)
                        AAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTG                                                                        <  SRR4302540.3743556/94‑1 (MQ=60)
                        AAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTG                                                                        >  SRR4302540.6119920/1‑94 (MQ=60)
                        AAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTG                                                                        <  SRR4302540.9524923/94‑1 (MQ=60)
                        AAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTG                                                                        >  SRR4302540.5469951/1‑94 (MQ=60)
                        AAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTG                                                                        >  SRR4302540.4781794/1‑94 (MQ=60)
                         AATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGG                                                                       <  SRR4302540.6636466/94‑1 (MQ=60)
                         AATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGG                                                                       >  SRR4302540.2246231/1‑94 (MQ=60)
                         AATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGG                                                                       <  SRR4302540.5582849/94‑1 (MQ=60)
                          ATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGC                                                                      >  SRR4302540.411663/1‑94 (MQ=60)
                           TACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCG                                                                     <  SRR4302540.6440775/94‑1 (MQ=60)
                           TACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCG                                                                     <  SRR4302540.4830280/94‑1 (MQ=60)
                           TACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCG                                                                     <  SRR4302540.736132/94‑1 (MQ=60)
                             CGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAT                                                                   <  SRR4302540.4263837/94‑1 (MQ=60)
                             CGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAT                                                                   >  SRR4302540.341679/1‑94 (MQ=60)
                             CGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAT                                                                   <  SRR4302540.254687/94‑1 (MQ=60)
                             CGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAT                                                                   >  SRR4302540.1817323/1‑94 (MQ=60)
                              GCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATT                                                                  <  SRR4302540.7667962/94‑1 (MQ=60)
                               CCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTT                                                                 >  SRR4302540.5708878/1‑94 (MQ=60)
                                CGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTC                                                                <  SRR4302540.3061765/94‑1 (MQ=60)
                                CGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTC                                                                >  SRR4302540.711610/1‑94 (MQ=60)
                                 GAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCA                                                               <  SRR4302540.7410417/94‑1 (MQ=60)
                                 GAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCA                                                               >  SRR4302540.8598054/1‑94 (MQ=60)
                                  AACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAG                                                              <  SRR4302540.5723053/94‑1 (MQ=60)
                                  AACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAG                                                              <  SRR4302540.23740/94‑1 (MQ=60)
                                   ACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGC                                                             >  SRR4302540.66152/1‑94 (MQ=60)
                                   ACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGC                                                             >  SRR4302540.8757222/1‑94 (MQ=60)
                                    CTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCC                                                            >  SRR4302540.6909247/1‑94 (MQ=60)
                                    CTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCC                                                            <  SRR4302540.9850744/94‑1 (MQ=60)
                                    CTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCC                                                            <  SRR4302540.3255965/94‑1 (MQ=60)
                                    CTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCC                                                            >  SRR4302540.2615176/1‑94 (MQ=60)
                                     TCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCG                                                           >  SRR4302540.2546981/1‑94 (MQ=60)
                                     TCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGCTCGCTTTCAGGTATTTGGCGATTTCAGCCG                                                           >  SRR4302540.3387619/1‑94 (MQ=60)
                                     TCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTAAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCG                                                           >  SRR4302540.1840380/1‑94 (MQ=60)
                                      CAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGG                                                          <  SRR4302540.10057521/94‑1 (MQ=60)
                                      CAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGG                                                          <  SRR4302540.545654/94‑1 (MQ=60)
                                      CAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGG                                                          <  SRR4302540.10155835/94‑1 (MQ=60)
                                       AAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGA                                                         >  SRR4302540.3526805/1‑94 (MQ=60)
                                       AAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGA                                                         >  SRR4302540.2189086/1‑94 (MQ=60)
                                        AAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGAT                                                        <  SRR4302540.3763146/94‑1 (MQ=60)
                                          GCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCTGGTATTTGGCGATTTCAGCCGGATCG                                                      >  SRR4302540.8367449/1‑94 (MQ=60)
                                          GCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCG                                                      <  SRR4302540.3512108/94‑1 (MQ=60)
                                            CTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTC                                                    >  SRR4302540.2577725/1‑94 (MQ=60)
                                            CTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTC                                                    <  SRR4302540.108575/94‑1 (MQ=60)
                                            CTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTC                                                    >  SRR4302540.7816963/1‑94 (MQ=60)
                                            CTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGGATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTC                                                    >  SRR4302540.8754873/1‑94 (MQ=60)
                                             TTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCA                                                   >  SRR4302540.5669883/1‑94 (MQ=60)
                                              TTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAG                                                  <  SRR4302540.3147328/94‑1 (MQ=60)
                                              TTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAG                                                  <  SRR4302540.8402989/94‑1 (MQ=60)
                                              TTCAGATCGCCTTTCTCATCCCAGGTCAGCGGGCCCATTACGGTATCCGCGGGGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAG                                                  <  SRR4302540.8402988/94‑1 (MQ=60)
                                               TCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGA                                                 <  SRR4302540.9476191/94‑1 (MQ=60)
                                                CAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCTCGGAGTTCGCTTTCAGGTATTTGTCGATTTCAGCCGGATCGTCAGAC                                                <  SRR4302540.6180093/94‑1 (MQ=60)
                                                CAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGAC                                                <  SRR4302540.5451964/94‑1 (MQ=60)
                                                 AGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACT                                               >  SRR4302540.927677/1‑94 (MQ=60)
                                                 AGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACT                                               >  SRR4302540.2589542/1‑94 (MQ=60)
                                                  GATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTGGCTTTCAGCTATTTGGCGATTTCAGCCGCATCGTCAGACTG                                              >  SRR4302540.4534659/1‑94 (MQ=60)
                                                  GATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTG                                              >  SRR4302540.3666123/1‑94 (MQ=60)
                                                  GATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTG                                              >  SRR4302540.2416464/1‑94 (MQ=60)
                                                  GATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTG                                              <  SRR4302540.7254093/94‑1 (MQ=60)
                                                  GAGCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGGATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTG                                              <  SRR4302540.462831/94‑1 (MQ=60)
                                                   ATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGA                                             >  SRR4302540.7096897/1‑94 (MQ=60)
                                                   ATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGA                                             >  SRR4302540.7096896/1‑94 (MQ=60)
                                                   ATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGA                                             >  SRR4302540.3938604/1‑94 (MQ=60)
                                                    TCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGAT                                            <  SRR4302540.4980977/94‑1 (MQ=60)
                                                     CGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATT                                           <  SRR4302540.8434222/94‑1 (MQ=60)
                                                     CGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATT                                           <  SRR4302540.4801182/94‑1 (MQ=60)
                                                     CGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATT                                           >  SRR4302540.2863796/1‑94 (MQ=60)
                                                     CGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATT                                           >  SRR4302540.7835629/1‑94 (MQ=60)
                                                      GCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTC                                          <  SRR4302540.4317976/94‑1 (MQ=60)
                                                      GCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTC                                          <  SRR4302540.1814250/94‑1 (MQ=60)
                                                      GCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTC                                          >  SRR4302540.3890152/1‑94 (MQ=60)
                                                       CCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCA                                         <  SRR4302540.2713043/94‑1 (MQ=60)
                                                        CTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG                                        <  SRR4302540.9829505/94‑1 (MQ=60)
                                                        CTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG                                        >  SRR4302540.10096359/1‑94 (MQ=60)
                                                        CTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG                                        <  SRR4302540.8744027/94‑1 (MQ=60)
                                                         TTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGG                                       >  SRR4302540.8314629/1‑94 (MQ=60)
                                                          TTCTCATCCCAGGTCAGCGGTCCCATTACGCTAGCCGCGTAGTTCGCTTTCAGGTCTTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGC                                      <  SRR4302540.3750077/94‑1 (MQ=60)
                                                            CTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCC                                    <  SRR4302540.8191672/94‑1 (MQ=60)
                                                            CTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCC                                    <  SRR4302540.6077471/94‑1 (MQ=60)
                                                            CTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCC                                    <  SRR4302540.5924309/94‑1 (MQ=60)
                                                            CTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCC                                    <  SRR4302540.6412248/94‑1 (MQ=60)
                                                               ATCCCAGGTCAGCTGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCTTCAGACTGATTCAGGCCCGCC                                 <  SRR4302540.8049989/94‑1 (MQ=60)
                                                               ATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCC                                 <  SRR4302540.3982977/94‑1 (MQ=60)
                                                                TCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCT                                >  SRR4302540.9811418/1‑94 (MQ=60)
                                                                TCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCT                                <  SRR4302540.2656610/94‑1 (MQ=60)
                                                                 CCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTG                               <  SRR4302540.2245081/94‑1 (MQ=60)
                                                                  CCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGC                              >  SRR4302540.5650941/1‑94 (MQ=60)
                                                                  CCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGCCCCGCCTGC                              >  SRR4302540.2506433/1‑94 (MQ=60)
                                                                   CAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCA                             >  SRR4302540.8751600/1‑94 (MQ=60)
                                                                   CAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCA                             <  SRR4302540.4748441/94‑1 (MQ=60)
                                                                   CAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCA                             >  SRR4302540.9125234/1‑94 (MQ=60)
                                                                   CAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCA                             >  SRR4302540.8463451/1‑94 (MQ=60)
                                                                   CAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCA                             <  SRR4302540.8118615/94‑1 (MQ=60)
                                                                    GGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAA                            >  SRR4302540.2118212/1‑94 (MQ=60)
                                                                    CGGTCAGCGGTCCCATTACGGAATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGCCTGATTACGGGCCGCCTGCAA                            >  SRR4302540.5804421/1‑94 (MQ=60)
                                                                    AGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAA                            >  SRR4302540.3230907/1‑94 (MQ=60)
                                                                     GGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAG                           >  SRR4302540.4588071/1‑94 (MQ=60)
                                                                       TCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGA                         >  SRR4302540.9424884/1‑94 (MQ=60)
                                                                        CAGTGGTCCCATTACGGTATCCGCGGAGTTCGCTTGCAGGTATTTGGCAATTTCAGCAGGATCGTCAGCCTGATTCAGGCCCGCCTGCAAAGAT                        <  SRR4302540.1365983/94‑1 (MQ=60)
                                                                        CAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGAT                        >  SRR4302540.8792317/1‑94 (MQ=60)
                                                                        CAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGAT                        <  SRR4302540.6164738/94‑1 (MQ=60)
                                                                         AGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATT                       >  SRR4302540.6143967/1‑94 (MQ=60)
                                                                         AGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATT                       <  SRR4302540.1065792/94‑1 (MQ=60)
                                                                         AGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATT                       <  SRR4302540.3380755/94‑1 (MQ=60)
                                                                          GCGTTCCCATTACGGCATCCTCGGAGTTCGCTTTCAGGTATTTGCCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTG                      <  SRR4302540.4939898/94‑1 (MQ=60)
                                                                          GCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTG                      >  SRR4302540.9323479/1‑94 (MQ=60)
                                                                          GCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTG                      <  SRR4302540.5482860/94‑1 (MQ=60)
                                                                           CTGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTAAGACTGATTCAGGCCCGCCTGCAAAGATTGC                     <  SRR4302540.7326686/94‑1 (MQ=60)
                                                                           CGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGC                     <  SRR4302540.1541578/94‑1 (MQ=60)
                                                                           CGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGC                     <  SRR4302540.8038156/94‑1 (MQ=60)
                                                                            GGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCA                    >  SRR4302540.6920902/1‑94 (MQ=60)
                                                                            GGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCA                    <  SRR4302540.4100294/94‑1 (MQ=60)
                                                                            GGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCA                    <  SRR4302540.4100295/94‑1 (MQ=60)
                                                                            GGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCA                    >  SRR4302540.2306972/1‑94 (MQ=60)
                                                                            GGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTAGTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCTCCTGCAAAGATTGCA                    >  SRR4302540.4912060/1‑94 (MQ=60)
                                                                             GTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAG                   <  SRR4302540.705144/94‑1 (MQ=60)
                                                                             GTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAG                   >  SRR4302540.8933979/1‑94 (MQ=60)
                                                                             GTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAG                   <  SRR4302540.7250303/94‑1 (MQ=60)
                                                                              TCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGC                  <  SRR4302540.1596835/94‑1 (MQ=60)
                                                                               CCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGGTTGCAGCG                 >  SRR4302540.9413177/1‑94 (MQ=60)
                                                                               CCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCG                 <  SRR4302540.3486080/94‑1 (MQ=60)
                                                                               CCCATTACGGTATCCACGGAGTTCGCATTCAGGTCTTTGGCAATTACAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCG                 <  SRR4302540.7777675/94‑1 (MQ=60)
                                                                                CCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGC                >  SRR4302540.8365019/1‑94 (MQ=60)
                                                                                 CATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCG               <  SRR4302540.753798/94‑1 (MQ=60)
                                                                                 CATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCG               >  SRR4302540.4278847/1‑94 (MQ=60)
                                                                                 CATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCG               >  SRR4302540.980227/1‑94 (MQ=60)
                                                                                  ATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGG              >  SRR4302540.6785861/1‑94 (MQ=60)
                                                                                  ATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGG              >  SRR4302540.1236798/1‑94 (MQ=60)
                                                                                  ATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGG              >  SRR4302540.254499/1‑94 (MQ=60)
                                                                                  ATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGG              >  SRR4302540.1845133/1‑94 (MQ=60)
                                                                                   TTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGC             <  SRR4302540.7836936/94‑1 (MQ=60)
                                                                                    TACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCG            >  SRR4302540.6950757/1‑94 (MQ=60)
                                                                                    TACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCG            >  SRR4302540.6827142/1‑94 (MQ=60)
                                                                                     ACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGT           >  SRR4302540.1616782/1‑94 (MQ=60)
                                                                                       GGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAG         <  SRR4302540.5699797/94‑1 (MQ=60)
                                                                                       GGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAG         <  SRR4302540.3571073/94‑1 (MQ=60)
                                                                                       GGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAG         <  SRR4302540.2119509/94‑1 (MQ=60)
                                                                                       GGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAG         <  SRR4302540.3185541/94‑1 (MQ=60)
                                                                                       GGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGCCCCCCCTGCAAAGATTGCATCGCGGCGTAG         >  SRR4302540.1721172/1‑94 (MQ=60)
                                                                                       GGTATCCACGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAG         <  SRR4302540.6670434/94‑1 (MQ=60)
                                                                                        GTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGG        <  SRR4302540.5014446/94‑1 (MQ=60)
                                                                                        GTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGG        <  SRR4302540.1503114/94‑1 (MQ=60)
                                                                                         TATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGT       <  SRR4302540.7810821/94‑1 (MQ=60)
                                                                                          ATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTG      <  SRR4302540.3424770/94‑1 (MQ=60)
                                                                                          ATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGCACCGCCTGCAAAGATTGCAGCGCGGCGTAGGTG      >  SRR4302540.6427644/1‑94 (MQ=60)
                                                                                            CCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAAGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGGT    <  SRR4302540.8546861/94‑1 (MQ=60)
                                                                                             CGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGGTC   >  SRR4302540.1198373/1‑94 (MQ=60)
                                                                                             CGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGGTC   >  SRR4302540.3779761/1‑94 (MQ=60)
                                                                                              GCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGGTCC  >  SRR4302540.9075835/1‑94 (MQ=60)
                                                                                              GCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGGTCC  >  SRR4302540.7802932/1‑94 (MQ=60)
                                                                                              GCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGGTCC  >  SRR4302540.4225527/1‑94 (MQ=60)
                                                                                              GCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGGTCC  >  SRR4302540.5866913/1‑94 (MQ=60)
                                                                                              |                                                                                             
CGCCGTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCACGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGGTCC  >  NC_000913/3596201‑3596388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑