Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,596,295 |
A→G |
V332A (GTG→GCG) |
b3460 ← |
LivJ |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,596,295 | 0 | A | G | 100.0%
| 764.6
/ NA
| 238 | V332A (GTG→GCG) | b3460 | LivJ |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (105/133); total (105/133) |
Only 100 of 250 total aligned reads displayed.
GTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCACGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTG > NC_000913/3596205‑3596384
|
gtgccgtTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCcgcg < 2:209044/93‑1 (MQ=255)
tgccgtTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCgg > 1:6116826/1‑93 (MQ=255)
gccgtTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGa > 2:5959317/1‑93 (MQ=255)
ggCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGc < 2:4380000/93‑1 (MQ=255)
gCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCt > 1:714928/1‑93 (MQ=255)
gTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCttt > 2:489018/1‑93 (MQ=255)
cAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAgg > 2:2267547/1‑93 (MQ=255)
cAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAgg < 1:2197787/93‑1 (MQ=255)
aGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGt < 2:6138125/93‑1 (MQ=255)
aGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGt < 2:5393815/93‑1 (MQ=255)
aGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGt < 1:5548140/93‑1 (MQ=255)
aGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGt < 1:5592050/93‑1 (MQ=255)
gTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTa > 1:3293069/1‑93 (MQ=255)
tCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTAt > 1:2070391/1‑93 (MQ=255)
tCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTAt > 2:1891042/1‑93 (MQ=255)
cAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTAtt > 2:1778917/1‑93 (MQ=255)
cAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTAtt < 2:5242608/93‑1 (MQ=255)
aaaTACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTAttt > 2:4588505/1‑93 (MQ=255)
aaaTACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTAttt < 2:4076995/93‑1 (MQ=255)
aaTACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTg > 1:530922/1‑93 (MQ=255)
aaTACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTg > 1:4214595/1‑93 (MQ=255)
tACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGc > 2:2730462/1‑93 (MQ=255)
gCCGAACTCAAAGCCTTACAGATCGCCTTTCTCATCTCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAt > 1:3243265/1‑93 (MQ=255)
ccGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAtt < 1:4268077/93‑1 (MQ=255)
cGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAttt > 1:5474397/1‑93 (MQ=255)
gAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGGGATTTc > 2:5611982/1‑93 (MQ=255)
gAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTc > 1:4237712/1‑93 (MQ=255)
aaCTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCa < 1:6191711/93‑1 (MQ=255)
aaCTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCa < 2:3465341/93‑1 (MQ=255)
aCTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAg < 1:1170488/93‑1 (MQ=255)
cTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGc < 2:1497939/93‑1 (MQ=255)
cTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGc < 2:2222599/93‑1 (MQ=255)
cTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGc > 2:3072361/1‑93 (MQ=255)
tCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGcc > 2:377238/1‑93 (MQ=255)
cAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCg < 1:4102142/93‑1 (MQ=255)
cAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCg < 2:1679556/93‑1 (MQ=255)
aaaGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCgg > 1:5898119/1‑93 (MQ=255)
cTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGt < 1:2801912/93‑1 (MQ=255)
cTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGt < 1:787668/93‑1 (MQ=255)
tttCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTc > 1:3912047/1‑93 (MQ=255)
tttCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTc > 1:3128349/1‑93 (MQ=255)
tttCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTc > 2:330467/1‑93 (MQ=255)
tttCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTc < 2:6309841/93‑1 (MQ=255)
ttCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCa < 1:4419711/93‑1 (MQ=255)
ttCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCa > 2:160092/1‑93 (MQ=255)
ttCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCa < 1:4595509/93‑1 (MQ=255)
tCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCTGATCGTCAg > 2:5050352/1‑93 (MQ=255)
aGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGAc > 1:5993412/1‑93 (MQ=255)
gATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACt < 1:6307796/93‑1 (MQ=255)
gATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACt > 2:2827638/1‑93 (MQ=255)
aTCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTg < 1:3082143/93‑1 (MQ=255)
gCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGAtt > 2:1313279/1‑93 (MQ=255)
ccTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTc < 2:4791525/93‑1 (MQ=255)
ccTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTc < 2:1064203/93‑1 (MQ=255)
cTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCa > 1:2029496/1‑93 (MQ=255)
tttCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAg < 2:816266/93‑1 (MQ=255)
tttCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAg > 1:3478883/1‑93 (MQ=255)
tttCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAg < 2:2402943/93‑1 (MQ=255)
tttCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAg < 1:475928/93‑1 (MQ=255)
tctcATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGc < 1:5143141/93‑1 (MQ=255)
tcATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGccc < 1:1545666/93‑1 (MQ=255)
cATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCg > 1:1729966/1‑93 (MQ=255)
tCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTGAGGCCCTcc > 1:1252153/1‑93 (MQ=255)
cccAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCt < 2:3691070/93‑1 (MQ=255)
ccAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTg > 1:5493197/1‑93 (MQ=255)
ccAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTg < 2:702794/93‑1 (MQ=255)
cAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGc < 2:1945599/93‑1 (MQ=255)
ggTCAGCGGTCCCATTACGGTATCCGAGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCaa < 1:1361163/93‑1 (MQ=255)
gTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCaaa < 1:247302/93‑1 (MQ=255)
tCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAg > 1:340568/1‑93 (MQ=255)
tCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAg < 2:4242549/93‑1 (MQ=255)
tCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAg < 2:1683713/93‑1 (MQ=255)
cAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGa < 2:265681/93‑1 (MQ=255)
aGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGAt < 1:3554459/93‑1 (MQ=255)
aGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGAt < 2:5487413/93‑1 (MQ=255)
aGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGAt < 1:2156495/93‑1 (MQ=255)
gCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGAtt > 1:1012483/1‑93 (MQ=255)
cGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTg < 1:2759740/93‑1 (MQ=255)
ggTCCCATTACGGTATCCGCGGAGTTCTCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGc < 2:2967158/93‑1 (MQ=255)
ggTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGc > 1:3721604/1‑93 (MQ=255)
ggTCCCATTACGGTATCCGCGGAGCTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGc < 2:3892915/93‑1 (MQ=255)
gTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGTGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCa < 1:916512/93‑1 (MQ=255)
gTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCa > 1:4468060/1‑93 (MQ=255)
gTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCa < 2:5697451/93‑1 (MQ=255)
gTCCCATTACGGTATCCGCGGAGTTCGATTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCTCGCCTGCAAAGATTGCa < 2:5255604/93‑1 (MQ=255)
tCCCATTACGGTATCCGCGGATTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGCCTGATTCAGGCCCGCCTGCAAAGATTGCAg < 1:4924209/93‑1 (MQ=255)
tCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAg < 2:4483716/93‑1 (MQ=255)
tCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAg < 2:4222970/93‑1 (MQ=255)
cccATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAgc < 2:2455856/93‑1 (MQ=255)
cATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAgcgc < 2:4153767/93‑1 (MQ=255)
cATTACGGCATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAgcgc < 1:4341410/93‑1 (MQ=255)
aTTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGcgcg > 1:2854200/1‑93 (MQ=255)
aTTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGcgcg > 2:5081763/1‑93 (MQ=255)
aTTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGcgcg < 2:1352004/93‑1 (MQ=255)
ggTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTa > 1:2673429/1‑93 (MQ=255)
ggTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTa < 2:5878303/93‑1 (MQ=255)
gTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAg < 1:2569581/93‑1 (MQ=255)
tATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAgg > 2:2612418/1‑93 (MQ=255)
tATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAgg < 2:1118620/93‑1 (MQ=255)
aTCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAggt < 1:3850997/93‑1 (MQ=255)
|
GTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCACGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGGCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTG > NC_000913/3596205‑3596384
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCGTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCACGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGGTCC > NC_000913/3596202‑3596388
|
GCCGTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCG > SRR4302533.3819742/1‑94 (MQ=60)
CCGTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGC < SRR4302533.6284401/94‑1 (MQ=60)
CGTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCG < SRR4302533.5076886/94‑1 (MQ=60)
GTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGG > SRR4302533.2809005/1‑94 (MQ=60)
GTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGG > SRR4302533.6153726/1‑94 (MQ=60)
TGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGA > SRR4302533.4341869/1‑94 (MQ=60)
CCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGT > SRR4302533.3538316/1‑94 (MQ=60)
CGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTT > SRR4302533.4451344/1‑94 (MQ=60)
GTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTC > SRR4302533.720058/1‑94 (MQ=60)
GTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTC > SRR4302533.5980642/1‑94 (MQ=60)
GTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTC < SRR4302533.3281260/94‑1 (MQ=60)
TTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCG < SRR4302533.2464195/94‑1 (MQ=60)
GGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCT > SRR4302533.4308865/1‑94 (MQ=60)
GGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCT > SRR4302533.719146/1‑94 (MQ=60)
CGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTT > SRR4302533.2090671/1‑94 (MQ=60)
CGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTT < SRR4302533.3994712/94‑1 (MQ=60)
CGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTT < SRR4302533.19283/94‑1 (MQ=60)
CAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGT < SRR4302533.5831868/94‑1 (MQ=60)
CAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGT < SRR4302533.2211327/94‑1 (MQ=60)
AGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTA > SRR4302533.3313396/1‑94 (MQ=60)
AGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTA > SRR4302533.4456096/1‑94 (MQ=60)
AGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTA < SRR4302533.5581647/94‑1 (MQ=60)
AGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTA < SRR4302533.5625831/94‑1 (MQ=60)
GTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTAT > SRR4302533.2083142/1‑94 (MQ=60)
CAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTT < SRR4302533.5620967/94‑1 (MQ=60)
AAATGCGCGGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCGCAGGTCAGCGGTCCGATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTG < SRR4302533.2612716/94‑1 (MQ=60)
AAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTG < SRR4302533.1458079/94‑1 (MQ=60)
AAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTG > SRR4302533.534080/1‑94 (MQ=60)
AAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTG > SRR4302533.4240093/1‑94 (MQ=60)
AATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGG < SRR4302533.5858678/94‑1 (MQ=60)
AATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGG < SRR4302533.5533656/94‑1 (MQ=60)
ATACGCCTAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGC < SRR4302533.1071514/94‑1 (MQ=60)
CGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAT < SRR4302533.1363557/94‑1 (MQ=60)
CGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAT > SRR4302533.2782906/1‑94 (MQ=60)
CGCCGAACTCAAAGCCTTACAGATCGCCTTTCTCATCTCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGAT > SRR4302533.3263252/1‑94 (MQ=60)
GCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATT > SRR4302533.2596641/1‑94 (MQ=60)
CCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTT < SRR4302533.4293634/94‑1 (MQ=60)
CCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTT < SRR4302533.4293774/94‑1 (MQ=60)
CCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTT > SRR4302533.5507395/1‑94 (MQ=60)
CGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTC > SRR4302533.5054762/1‑94 (MQ=60)
CGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTC > SRR4302533.3774223/1‑94 (MQ=60)
CGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTC > SRR4302533.2070465/1‑94 (MQ=60)
CGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTC > SRR4302533.1846165/1‑94 (MQ=60)
CGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTC > SRR4302533.4263308/1‑94 (MQ=60)
GAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCT > SRR4302533.4707156/1‑94 (MQ=60)
GAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCA > SRR4302533.3005488/1‑94 (MQ=60)
GAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGGATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCA > SRR4302533.2880058/1‑94 (MQ=60)
AACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAG < SRR4302533.4784558/94‑1 (MQ=60)
AACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAG < SRR4302533.2182736/94‑1 (MQ=60)
AACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAG < SRR4302533.6228869/94‑1 (MQ=60)
AACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAG < SRR4302533.3935629/94‑1 (MQ=60)
ACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGC < SRR4302533.1177516/94‑1 (MQ=60)
CTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCC > SRR4302533.3785228/1‑94 (MQ=60)
CTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCC > SRR4302533.5402807/1‑94 (MQ=60)
TCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCG < SRR4302533.4863265/94‑1 (MQ=60)
CAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGG < SRR4302533.4127103/94‑1 (MQ=60)
CAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGG > SRR4302533.5933739/1‑94 (MQ=60)
AAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGAT < SRR4302533.3503489/94‑1 (MQ=60)
AAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGAT < SRR4302533.1568629/94‑1 (MQ=60)
AGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATC > SRR4302533.4246813/1‑94 (MQ=60)
GCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCG > SRR4302533.96919/1‑94 (MQ=60)
CCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGT > SRR4302533.3377795/1‑94 (MQ=60)
CCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGT < SRR4302533.524428/94‑1 (MQ=60)
CTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTC > SRR4302533.3935937/1‑94 (MQ=60)
CTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTC < SRR4302533.792294/94‑1 (MQ=60)
CTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTC < SRR4302533.3260473/94‑1 (MQ=60)
CTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTC > SRR4302533.3147581/1‑94 (MQ=60)
CTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTC < SRR4302533.2819154/94‑1 (MQ=60)
TTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCA < SRR4302533.89829/94‑1 (MQ=60)
TTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCA < SRR4302533.4182459/94‑1 (MQ=60)
TTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAG < SRR4302533.4623348/94‑1 (MQ=60)
TTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAG < SRR4302533.4446433/94‑1 (MQ=60)
TTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAG < SRR4302533.5789034/94‑1 (MQ=60)
CAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGAC > SRR4302533.6029715/1‑94 (MQ=60)
AGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACT < SRR4302533.74418/94‑1 (MQ=60)
GATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGCCTG > SRR4302533.1218398/1‑94 (MQ=60)
GATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTG < SRR4302533.6345627/94‑1 (MQ=60)
ATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGA < SRR4302533.3101052/94‑1 (MQ=60)
CCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCA > SRR4302533.2042023/1‑94 (MQ=60)
CTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG > SRR4302533.3500348/1‑94 (MQ=60)
TTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑G < SRR4302533.478768/94‑1 (MQ=60)
TCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCC < SRR4302533.5174224/94‑1 (MQ=60)
TCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCC < SRR4302533.5519985/94‑1 (MQ=60)
CTCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGGTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAGTGCC > SRR4302533.5555397/1‑94 (MQ=60)
TCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCG < SRR4302533.6155177/94‑1 (MQ=60)
TCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCG < SRR4302533.1554981/94‑1 (MQ=60)
TCATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCG > SRR4302533.1740454/1‑94 (MQ=60)
CATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGC > SRR4302533.3190108/1‑94 (MQ=60)
CATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGC > SRR4302533.2520232/1‑94 (MQ=60)
ATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTGAG‑GCCCTCC > SRR4302533.1259636/1‑94 (MQ=60)
ATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCC > SRR4302533.6238615/1‑94 (MQ=60)
ATCCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCC > SRR4302533.4533753/1‑94 (MQ=60)
CCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTG > SRR4302533.1509982/1‑94 (MQ=60)
CCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTG > SRR4302533.5526331/1‑94 (MQ=60)
CCCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑CCCCGCATG > SRR4302533.3122555/1‑94 (MQ=60)
CCAGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGC < SRR4302533.2451848/94‑1 (MQ=60)
AGGTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAA < SRR4302533.3444080/94‑1 (MQ=60)
GGTCAGCGGTCCCATTACGGTATCCGAGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAA < SRR4302533.1369339/94‑1 (MQ=60)
GTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAG < SRR4302533.214899/94‑1 (MQ=60)
GTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAG < SRR4302533.248830/94‑1 (MQ=60)
GTCAGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAG > SRR4302533.342647/1‑94 (MQ=60)
AGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATT < SRR4302533.2169772/94‑1 (MQ=60)
AGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATT > SRR4302533.1018408/1‑94 (MQ=60)
AGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATT < SRR4302533.675302/94‑1 (MQ=60)
AGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATT > SRR4302533.5343848/1‑94 (MQ=60)
AGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATT < SRR4302533.3576360/94‑1 (MQ=60)
AGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATT < SRR4302533.4257637/94‑1 (MQ=60)
AGCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATATCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATT < SRR4302533.3409309/94‑1 (MQ=60)
GCGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTG < SRR4302533.61315/94‑1 (MQ=60)
CGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGC < SRR4302533.2776654/94‑1 (MQ=60)
CGGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGC > SRR4302533.3744444/1‑94 (MQ=60)
GGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCA < SRR4302533.4102648/94‑1 (MQ=60)
GGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCA > SRR4302533.4495083/1‑94 (MQ=60)
GGTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCA > SRR4302533.100001/1‑94 (MQ=60)
GTCCCATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGTGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAG < SRR4302533.921897/94‑1 (MQ=60)
TCCCATTACGGTATCCGCGGATTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGCCTGATTCAG‑GCCCGCCTGCAAAGATTGCAGC < SRR4302533.4954038/94‑1 (MQ=60)
CATTACGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCG > SRR4302533.2871762/1‑94 (MQ=60)
CATTACGGCATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCG < SRR4302533.4367574/94‑1 (MQ=60)
CGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTA < SRR4302533.5089778/94‑1 (MQ=60)
CGGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTA > SRR4302533.2689828/1‑94 (MQ=60)
GGTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTAG < SRR4302533.6274590/94‑1 (MQ=60)
GTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTAGG < SRR4302533.2585393/94‑1 (MQ=60)
GTATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTAGG > SRR4302533.1218230/1‑94 (MQ=60)
TATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGT < SRR4302533.2696883/94‑1 (MQ=60)
ATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTG < SRR4302533.3874510/94‑1 (MQ=60)
ATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTG < SRR4302533.3739775/94‑1 (MQ=60)
ATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTG > SRR4302533.4428819/1‑94 (MQ=60)
ATCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTG < SRR4302533.2865273/94‑1 (MQ=60)
TCCGCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGG < SRR4302533.6052487/94‑1 (MQ=60)
CCGCGGAGTTCGCTTTCAGGTATTTGTCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGGT < SRR4302533.4764030/94‑1 (MQ=60)
GCGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGGTCC > SRR4302533.3398689/1‑94 (MQ=60)
|
GCCGTGCCGTTGGCGTGCCAGTCAAATACGCCGAACTCAAAGCCTTTCAGATCGCCTTTCTCATCCCAGGTCAGCGGTCCCATTACGGTATCCACGGAGTTCGCTTTCAGGTATTTGGCGATTTCAGCCGGATCGTCAGACTGATTCAG‑GCCCGCCTGCAAAGATTGCAGCGCGGCGTAGGTGGTCC > NC_000913/3596202‑3596388
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
