Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,620,852	A→G	T1344A (ACT→GCT)	rhsB →	RhsB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,620,852	0	A	G	100.0%	2810.6 / NA	846	T1344A (ACT→GCT)	rhsB	RhsB
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (450/396); total (450/396)

Only 100 of 852 total aligned reads displayed.

TCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATACTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATC  >  NC_000913/3620762‑3620941

tcAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCt                                                                                         >  1:7555604/1‑93 (MQ=255)

tcAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCt                                                                                         >  2:5361903/1‑93 (MQ=255)

tcAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCt                                                                                         >  2:6403416/1‑93 (MQ=255)

  aaCAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCa                                                                                       >  1:6956063/1‑93 (MQ=255)

  aaCAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCa                                                                                       <  2:8669698/93‑1 (MQ=255)

  aaCAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCa                                                                                       <  2:7752825/93‑1 (MQ=255)

   aCAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCAt                                                                                      >  2:3380925/1‑93 (MQ=255)

   aCAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCAt                                                                                      >  2:1249248/1‑93 (MQ=255)

    cAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATg                                                                                     >  2:5097642/1‑93 (MQ=255)

     aGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATgg                                                                                    >  1:9762546/1‑93 (MQ=255)

       cACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTg                                                                                  >  1:1645639/1‑93 (MQ=255)

        aCCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGc                                                                                 >  1:2778648/1‑93 (MQ=255)

         ccTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCa                                                                                >  2:6571464/1‑93 (MQ=255)

           tAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGa                                                                              <  2:4949943/93‑1 (MQ=255)

           caaCCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGa                                                                              <  2:8839186/92‑1 (MQ=255)

             aCCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATa                                                                            >  1:5503120/1‑93 (MQ=255)

                 aggagAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCa                                                                        <  2:8096808/93‑1 (MQ=255)

                  ggagAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCAt                                                                       <  1:7719457/93‑1 (MQ=255)

                        agaaaAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGaa                                                                 <  2:1752803/93‑1 (MQ=255)

                        agaaaAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGaa                                                                 >  1:6817242/1‑93 (MQ=255)

                          aaaaGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAata                                                               <  2:2911995/93‑1 (MQ=255)

                          aaaaGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAata                                                               <  1:8614379/93‑1 (MQ=255)

                           aaaGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAatat                                                              >  2:9671037/1‑93 (MQ=255)

                             aGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTg                                                            <  1:8738070/93‑1 (MQ=255)

                               gATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTggg                                                          <  1:9569370/93‑1 (MQ=255)

                               gATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTggg                                                          <  2:667412/93‑1 (MQ=255)

                                aTCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGa                                                         <  2:7228316/93‑1 (MQ=255)

                                aTCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGa                                                         >  1:133281/1‑93 (MQ=255)

                                 tCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGAc                                                        >  1:4265571/1‑93 (MQ=255)

                                  cATATCGATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACg                                                       >  2:9761051/1‑93 (MQ=255)

                                   atatCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGa                                                      <  2:3041771/93‑1 (MQ=255)

                                   atatCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGa                                                      <  1:8908406/93‑1 (MQ=255)

                                    tatCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGaa                                                     >  2:203434/1‑93 (MQ=255)

                                     atCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGaaa                                                    <  2:319049/93‑1 (MQ=255)

                                     atCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGaaa                                                    <  1:5446307/93‑1 (MQ=255)

                                      tCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAat                                                   >  1:115437/1‑93 (MQ=255)

                                       ccATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAata                                                  <  2:7980440/93‑1 (MQ=255)

                                       ccATTCAATAGCCCTTGCAATAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAata                                                  <  2:7054665/93‑1 (MQ=255)

                                        cATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAatat                                                 <  1:8296501/93‑1 (MQ=255)

                                        cATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAatat                                                 >  1:1989058/1‑93 (MQ=255)

                                        cATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAatat                                                 <  1:9882061/93‑1 (MQ=255)

                                         aTTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAtt                                                <  2:7376053/93‑1 (MQ=255)

                                          ttCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAttt                                               >  2:2514718/1‑93 (MQ=255)

                                           tCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAtttt                                              <  2:4381823/93‑1 (MQ=255)

                                           tCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAtttt                                              <  2:5848731/93‑1 (MQ=255)

                                           tCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAtttt                                              <  1:7301841/93‑1 (MQ=255)

                                            cAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTc                                             <  2:4587551/93‑1 (MQ=255)

                                             aaTAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCa                                            >  1:3774921/1‑93 (MQ=255)

                                              aTAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAg                                           >  1:2576095/1‑93 (MQ=255)

                                               tAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGCAATATTTTCAgg                                          >  2:5160297/1‑93 (MQ=255)

                                                 gCCCTTGCCCTAATGGTCCTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGCGAATATTGGGACGAAATATTTTCAGGTa                                        >  1:360052/1‑93 (MQ=38)

                                                 gCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTa                                        <  1:937364/93‑1 (MQ=255)

                                                   ccTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTaaa                                      <  2:396249/93‑1 (MQ=255)

                                                   ccTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTaaa                                      <  1:8416962/93‑1 (MQ=255)

                                                   ccTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTaaa                                      <  2:7604873/93‑1 (MQ=255)

                                                     ttGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGa                                    <  2:2131743/93‑1 (MQ=255)

                                                     ttGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGa                                    <  1:457060/93‑1 (MQ=255)

                                                      tGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGAt                                   <  1:4422002/93‑1 (MQ=255)

                                                      tGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGAt                                   >  1:3294520/1‑93 (MQ=255)

                                                      tGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGAt                                   <  1:7204189/93‑1 (MQ=255)

                                                         ccTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATgag                                >  1:6415558/1‑93 (MQ=255)

                                                          cTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATgaga                               >  2:8297063/1‑93 (MQ=255)

                                                          cTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATgaga                               <  2:5593993/93‑1 (MQ=255)

                                                           tAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGaa                              <  1:2977228/93‑1 (MQ=255)

                                                              tGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAAt                           >  2:9133178/1‑93 (MQ=255)

                                                              tGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAAt                           >  2:10040315/1‑93 (MQ=255)

                                                                 tACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGt                        <  1:5905103/93‑1 (MQ=255)

                                                                  aCTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGtt                       <  2:6929010/93‑1 (MQ=255)

                                                                   cTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTa                      >  2:5998709/1‑93 (MQ=255)

                                                                   cTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTa                      >  1:3458360/1‑93 (MQ=255)

                                                                    tGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTaa                     >  2:9345988/1‑93 (MQ=255)

                                                                    tGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTaa                     <  2:3685827/93‑1 (MQ=255)

                                                                    tGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTaa                     >  2:36074/1‑93 (MQ=255)

                                                                    tGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTaa                     >  1:521900/1‑93 (MQ=255)

                                                                    tGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTaa                     <  1:6680094/93‑1 (MQ=255)

                                                                     gagaAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTaaa                    >  2:384299/1‑93 (MQ=255)

                                                                     gagaAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTaaa                    >  1:5657593/1‑93 (MQ=255)

                                                                         aaGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTa                <  2:5734080/93‑1 (MQ=255)

                                                                          aGTATTTGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGATGTTATATTTTCAGGGAAAGATGAGTAAATAGTGAAAAGTaa               >  2:8944219/1‑93 (MQ=25)

                                                                           gTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTaaa              <  1:4045943/93‑1 (MQ=255)

                                                                            tATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAg             >  2:4788951/1‑93 (MQ=255)

                                                                             aTCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGa            <  1:5090147/93‑1 (MQ=255)

                                                                             aTCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGa            >  1:9072436/1‑93 (MQ=255)

                                                                              tCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGAt           >  2:2781038/1‑93 (MQ=255)

                                                                               cAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATa          <  2:9892163/93‑1 (MQ=255)

                                                                               cAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATa          >  2:6830039/1‑93 (MQ=255)

                                                                                 gCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAAc        >  2:2625360/1‑93 (MQ=255)

                                                                                 gCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAAc        >  2:1444202/1‑93 (MQ=255)

                                                                                 gCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAAc        <  1:6537044/93‑1 (MQ=255)

                                                                                 gCTTACCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAAc        <  2:6172651/93‑1 (MQ=255)

                                                                                  cTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACa       <  2:2382417/93‑1 (MQ=255)

                                                                                  cTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACa       <  2:1619795/93‑1 (MQ=255)

                                                                                  cTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACa       <  1:4869374/93‑1 (MQ=255)

                                                                                    tATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAat     <  1:2479010/93‑1 (MQ=255)

                                                                                    tATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAat     >  1:2255503/1‑93 (MQ=255)

                                                                                     aTCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAata    <  1:8138023/93‑1 (MQ=255)

                                                                                      tCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAatat   >  2:8451628/1‑93 (MQ=255)

                                                                                       cATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATc  <  1:6133017/93‑1 (MQ=255)

                                                                                       cATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATc  >  1:3928783/1‑93 (MQ=255)

                                                                                       cATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATc  >  1:10037399/1‑93 (MQ=255)

TCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATACTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATC  >  NC_000913/3620762‑3620941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 422 total aligned reads displayed.

TTCTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATACTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAAG  >  NC_000913/3620759‑3620944

TTCTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATG                                                                                              >  SRR4302540.3566587/1‑94 (MQ=60)

TTCTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATG                                                                                              <  SRR4302540.4634857/94‑1 (MQ=60)

TTCTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATG                                                                                              >  SRR4302540.4960956/1‑94 (MQ=60)

  CTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCATCTTATCATGCT                                                                                            >  SRR4302540.2613516/1‑94 (MQ=60)

  CTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCT                                                                                            <  SRR4302540.4063202/94‑1 (MQ=60)

  CTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCT                                                                                            >  SRR4302540.10084300/1‑94 (MQ=60)

  CTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCT                                                                                            <  SRR4302540.1556665/94‑1 (MQ=60)

  CTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCT                                                                                            >  SRR4302540.9194856/1‑94 (MQ=60)

  CTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCT                                                                                            >  SRR4302540.3328923/1‑94 (MQ=60)

   TCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTC                                                                                           >  SRR4302540.6053598/1‑94 (MQ=60)

     AACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCAT                                                                                         <  SRR4302540.4669088/94‑1 (MQ=60)

     AACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCAT                                                                                         <  SRR4302540.9517713/94‑1 (MQ=60)

     AACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCAT                                                                                         <  SRR4302540.5103884/94‑1 (MQ=60)

     AACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCAT                                                                                         >  SRR4302540.3349150/1‑94 (MQ=60)

      ACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATG                                                                                        <  SRR4302540.6980991/94‑1 (MQ=60)

      ACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATG                                                                                        >  SRR4302540.710681/1‑94 (MQ=60)

      ACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATG                                                                                        <  SRR4302540.8834543/94‑1 (MQ=60)

       CAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGG                                                                                       >  SRR4302540.9877048/1‑94 (MQ=60)

       CAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGG                                                                                       >  SRR4302540.7715984/1‑94 (MQ=60)

       CAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGG                                                                                       >  SRR4302540.6944772/1‑94 (MQ=60)

        AGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGtg                                                                                      >  SRR4302540.7759079/1‑92 (MQ=60)

         GCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTG                                                                                     >  SRR4302540.687415/1‑94 (MQ=60)

         GCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTG                                                                                     >  SRR4302540.1663605/1‑94 (MQ=60)

         GCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTG                                                                                     <  SRR4302540.8247734/94‑1 (MQ=60)

          CACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGC                                                                                    >  SRR4302540.282219/1‑94 (MQ=60)

          CACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGC                                                                                    <  SRR4302540.5248187/94‑1 (MQ=60)

          CACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGC                                                                                    <  SRR4302540.7772328/94‑1 (MQ=60)

           ACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCA                                                                                   >  SRR4302540.8949830/1‑94 (MQ=60)

            CCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAG                                                                                  <  SRR4302540.5595212/94‑1 (MQ=60)

            CCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAG                                                                                  >  SRR4302540.1293013/1‑94 (MQ=60)

             CTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGA                                                                                 >  SRR4302540.64921/1‑94 (MQ=60)

             CTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGA                                                                                 >  SRR4302540.4577617/1‑94 (MQ=60)

             CTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGA                                                                                 >  SRR4302540.5285933/1‑94 (MQ=60)

              TAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGAT                                                                                >  SRR4302540.9706003/1‑94 (MQ=60)

               AACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATTGTGCAGATA                                                                               <  SRR4302540.6725287/94‑1 (MQ=60)

               AACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATA                                                                               >  SRR4302540.5563731/1‑94 (MQ=60)

               AACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATA                                                                               >  SRR4302540.3386632/1‑94 (MQ=60)

               AACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATA                                                                               >  SRR4302540.8972375/1‑94 (MQ=60)

               AACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATA                                                                               <  SRR4302540.4815673/94‑1 (MQ=60)

                ACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAG                                                                              >  SRR4302540.3483454/1‑94 (MQ=60)

                ACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAG                                                                              >  SRR4302540.2460870/1‑94 (MQ=60)

                ACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAG                                                                              >  SRR4302540.2325249/1‑94 (MQ=60)

                 CCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGT                                                                             >  SRR4302540.6240925/1‑94 (MQ=60)

                 CCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGT                                                                             <  SRR4302540.8650768/94‑1 (MQ=60)

                  CGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTC                                                                            >  SRR4302540.9422331/1‑94 (MQ=60)

                  CGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTC                                                                            <  SRR4302540.178374/94‑1 (MQ=60)

                    AGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCAT                                                                          <  SRR4302540.6629521/94‑1 (MQ=60)

                    AGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCAT                                                                          <  SRR4302540.2303564/94‑1 (MQ=60)

                     GGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATG                                                                         <  SRR4302540.7808873/94‑1 (MQ=60)

                      GAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGG                                                                        <  SRR4302540.3774224/94‑1 (MQ=60)

                       AGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGA                                                                       <  SRR4302540.1109158/94‑1 (MQ=60)

                       AGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGA                                                                       >  SRR4302540.2840572/1‑94 (MQ=60)

                        GAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAG                                                                      <  SRR4302540.5751293/94‑1 (MQ=60)

                        GAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAG                                                                      <  SRR4302540.5910417/94‑1 (MQ=60)

                        GAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAG                                                                      >  SRR4302540.6850548/1‑94 (MQ=60)

                         AAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGA                                                                     >  SRR4302540.2566792/1‑94 (MQ=60)

                          AAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAA                                                                    >  SRR4302540.6892701/1‑94 (MQ=60)

                          AAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAA                                                                    >  SRR4302540.459791/1‑94 (MQ=60)

                            GAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATA                                                                  >  SRR4302540.1388374/1‑94 (MQ=60)

                             AAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATAT                                                                 <  SRR4302540.7467391/94‑1 (MQ=60)

                             AAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATAT                                                                 <  SRR4302540.6470405/94‑1 (MQ=60)

                             AAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATAT                                                                 >  SRR4302540.8436893/1‑94 (MQ=60)

                               AAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTG                                                               <  SRR4302540.6570148/94‑1 (MQ=60)

                                 GGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGG                                                             <  SRR4302540.2085534/94‑1 (MQ=60)

                                  GATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGA                                                            >  SRR4302540.134677/1‑94 (MQ=60)

                                  GATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGA                                                            >  SRR4302540.8755058/1‑94 (MQ=60)

                                  GATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGA                                                            <  SRR4302540.9935894/94‑1 (MQ=60)

                                   ATCATATCCATTCAATAGCTCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGAC                                                           <  SRR4302540.9897008/94‑1 (MQ=60)

                                   ATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGAC                                                           >  SRR4302540.9746345/1‑94 (MQ=60)

                                      ATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAA                                                        >  SRR4302540.7620007/1‑94 (MQ=60)

                                        ATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAAT                                                      >  SRR4302540.7058665/1‑94 (MQ=60)

                                        ATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAAT                                                      >  SRR4302540.116671/1‑94 (MQ=60)

                                        ATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAAT                                                      >  SRR4302540.226684/1‑94 (MQ=60)

                                        ATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAAT                                                      >  SRR4302540.4804675/1‑94 (MQ=60)

                                        ATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAAT                                                      <  SRR4302540.5506240/94‑1 (MQ=60)

                                         TCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATT                                                     >  SRR4302540.8864293/1‑94 (MQ=60)

                                         TCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATA                                                     <  SRR4302540.8283370/94‑1 (MQ=60)

                                         TCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATA                                                     >  SRR4302540.3022301/1‑94 (MQ=60)

                                         TCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATA                                                     >  SRR4302540.8741164/1‑94 (MQ=60)

                                          CCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAT                                                    >  SRR4302540.2010615/1‑94 (MQ=60)

                                          CCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAT                                                    <  SRR4302540.5046798/94‑1 (MQ=60)

                                          CCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAATATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATAT                                                    <  SRR4302540.7325823/94‑1 (MQ=60)

                                           CATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGTTGCAGATAGTCATGGAGAATATTGGGACGAAATATT                                                   <  SRR4302540.6318866/94‑1 (MQ=60)

                                           CATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATT                                                   <  SRR4302540.8392840/94‑1 (MQ=60)

                                           CATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATT                                                   >  SRR4302540.5718281/1‑94 (MQ=60)

                                            ATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTT                                                  >  SRR4302540.5354419/1‑94 (MQ=60)

                                            ATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTT                                                  >  SRR4302540.2213825/1‑94 (MQ=60)

                                            ATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTT                                                  >  SRR4302540.5536428/1‑94 (MQ=60)

                                            ATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTT                                                  <  SRR4302540.4324110/94‑1 (MQ=60)

                                             TTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTT                                                 <  SRR4302540.8528336/94‑1 (MQ=60)

                                             TTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTT                                                 >  SRR4302540.8860039/1‑94 (MQ=60)

                                              TCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTC                                                <  SRR4302540.5274888/94‑1 (MQ=60)

                                              TCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTC                                                <  SRR4302540.7383341/94‑1 (MQ=60)

                                               CAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCA                                               >  SRR4302540.3816105/1‑94 (MQ=60)

                                                 ATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGG                                             >  SRR4302540.8317433/1‑94 (MQ=60)

                                                 ATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGG                                             <  SRR4302540.1495548/94‑1 (MQ=60)

                                                  TAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGT                                            <  SRR4302540.1643174/94‑1 (MQ=60)

                                                   AGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAAGATTGGGACGAAATATTTTCATGTA                                           >  SRR4302540.658246/1‑94 (MQ=60)

                                                    GCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAA                                          <  SRR4302540.2551897/94‑1 (MQ=60)

                                                    GCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGCGCAGATTGTCTTGGAGAATATTGGGACGAATTTTTTTCAGGTAA                                          >  SRR4302540.7804975/1‑94 (MQ=60)

                                                     CCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCCGCTAGTCATGGAGACTATTGGGACGAAATATTGTCAGGTAAA                                         >  SRR4302540.1070451/1‑94 (MQ=60)

                                                      CCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAG                                        <  SRR4302540.8033469/94‑1 (MQ=60)

                                                      CCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAG                                        <  SRR4302540.2409133/94‑1 (MQ=60)

                                                      CCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAG                                        >  SRR4302540.6194747/1‑94 (MQ=60)

                                                      CCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAG                                        <  SRR4302540.394746/94‑1 (MQ=60)

                                                      CCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAG                                        <  SRR4302540.8514661/94‑1 (MQ=60)

                                                      CCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAG                                        >  SRR4302540.4303576/1‑94 (MQ=60)

                                                       CTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGA                                       >  SRR4302540.2696238/1‑94 (MQ=60)

                                                       CTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGA                                       >  SRR4302540.4402912/1‑94 (MQ=60)

                                                       CTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGA                                       <  SRR4302540.4595845/94‑1 (MQ=60)

                                                       CTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGA                                       >  SRR4302540.7155339/1‑94 (MQ=60)

                                                        TTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGAT                                      <  SRR4302540.1181969/94‑1 (MQ=60)

                                                        TTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGAT                                      <  SRR4302540.652113/94‑1 (MQ=60)

                                                        TTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGAT                                      <  SRR4302540.5865542/94‑1 (MQ=60)

                                                        TTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGAT                                      <  SRR4302540.5387257/94‑1 (MQ=60)

                                                         TGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATG                                     <  SRR4302540.4469916/94‑1 (MQ=60)

                                                          GCCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGA                                    <  SRR4302540.6935237/94‑1 (MQ=60)

                                                           CCCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAG                                   <  SRR4302540.6804859/94‑1 (MQ=60)

                                                            CCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGA                                  >  SRR4302540.7286005/1‑94 (MQ=60)

                                                            CCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGA                                  >  SRR4302540.7889608/1‑94 (MQ=60)

                                                            CCTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTCTCAGGTAAAGATGAGA                                  >  SRR4302540.9032801/1‑94 (MQ=60)

                                                             CTAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAA                                 >  SRR4302540.3963179/1‑94 (MQ=60)

                                                              TAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAA                                >  SRR4302540.1670328/1‑94 (MQ=60)

                                                              TAATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAA                                <  SRR4302540.3593833/94‑1 (MQ=60)

                                                                ATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCATGTAAAGATGAGAAAAT                              >  SRR4302540.2945220/1‑94 (MQ=60)

                                                                ATGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAAT                              <  SRR4302540.7316297/94‑1 (MQ=60)

                                                                 TGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATA                             <  SRR4302540.7365835/94‑1 (MQ=60)

                                                                 TGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATA                             >  SRR4302540.4449444/1‑94 (MQ=60)

                                                                 TGGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATA                             <  SRR4302540.8794248/94‑1 (MQ=60)

                                                                  GGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAG                            <  SRR4302540.10014652/94‑1 (MQ=60)

                                                                  GGTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAG                            <  SRR4302540.4043221/94‑1 (MQ=60)

                                                                   GTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGT                           >  SRR4302540.1239513/1‑94 (MQ=60)

                                                                   GTACTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGT                           >  SRR4302540.3743106/1‑94 (MQ=60)

                                                                      CTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAA                        <  SRR4302540.4495100/94‑1 (MQ=60)

                                                                      CTGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAA                        <  SRR4302540.5144302/94‑1 (MQ=60)

                                                                       TGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAA                       <  SRR4302540.2994924/94‑1 (MQ=60)

                                                                       TGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAA                       >  SRR4302540.8551569/1‑94 (MQ=60)

                                                                       TGAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAA                       >  SRR4302540.4253453/1‑94 (MQ=60)

                                                                        GAGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAA                      <  SRR4302540.6270559/94‑1 (MQ=60)

                                                                         AGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAG                     <  SRR4302540.9562964/94‑1 (MQ=60)

                                                                         AGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAG                     <  SRR4302540.5551777/94‑1 (MQ=60)

                                                                         AGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAG                     <  SRR4302540.9119053/94‑1 (MQ=60)

                                                                         AGAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAG                     >  SRR4302540.3182916/1‑94 (MQ=60)

                                                                          GAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGT                    <  SRR4302540.5821268/94‑1 (MQ=60)

                                                                          GAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGT                    <  SRR4302540.3630459/94‑1 (MQ=60)

                                                                          GAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGT                    <  SRR4302540.279581/94‑1 (MQ=60)

                                                                          GAAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGA                    >  SRR4302540.4182285/1‑94 (MQ=60)

                                                                           AAAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTA                   <  SRR4302540.10034485/94‑1 (MQ=60)

                                                                            AAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGCAATATTTTCAGATAAAGATGAGAAAATAGTTAAAAGTAA                  >  SRR4302540.5628540/1‑94 (MQ=60)

                                                                            AAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAA                  <  SRR4302540.1083753/94‑1 (MQ=60)

                                                                            AAGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAA                  <  SRR4302540.357962/94‑1 (MQ=60)

                                                                             AGTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAA                 <  SRR4302540.9767534/94‑1 (MQ=60)

                                                                              GTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAG                <  SRR4302540.6656757/94‑1 (MQ=60)

                                                                              GTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAG                <  SRR4302540.4089569/94‑1 (MQ=60)

                                                                              GTATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCACGTAAAGATGAGAACATAGTTAAAAGTAAAG                >  SRR4302540.6997158/1‑94 (MQ=60)

                                                                              GTATCAGCTTATCAGGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAG                <  SRR4302540.8479274/94‑1 (MQ=60)

                                                                               TATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGA               >  SRR4302540.9181389/1‑94 (MQ=60)

                                                                                ATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGAT              <  SRR4302540.5145194/94‑1 (MQ=60)

                                                                                ATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGAT              >  SRR4302540.8289338/1‑94 (MQ=60)

                                                                                ATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGAT              >  SRR4302540.6143561/1‑94 (MQ=60)

                                                                                ATCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGAT              >  SRR4302540.10106241/1‑94 (MQ=60)

                                                                                 TCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATA             >  SRR4302540.9449738/1‑94 (MQ=60)

                                                                                 TCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATA             >  SRR4302540.3916365/1‑94 (MQ=60)

                                                                                 TCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATA             >  SRR4302540.3454313/1‑94 (MQ=60)

                                                                                 TCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATA             <  SRR4302540.2672949/94‑1 (MQ=60)

                                                                                 TCAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATA             <  SRR4302540.8538772/94‑1 (MQ=60)

                                                                                  CAGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAA            <  SRR4302540.3111/94‑1 (MQ=60)

                                                                                  CAGCTTATCAAGCTCATGGTGCAGATAGTCATGGAGAATATTGAGACGAAATATTTTAAAGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAA            <  SRR4302540.9070263/94‑1 (MQ=60)

                                                                                   AGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAAC           <  SRR4302540.9967872/94‑1 (MQ=60)

                                                                                   AGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAAC           <  SRR4302540.7236004/94‑1 (MQ=60)

                                                                                   AGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAAC           <  SRR4302540.2534855/94‑1 (MQ=60)

                                                                                   AGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAAC           <  SRR4302540.4001862/94‑1 (MQ=60)

                                                                                   AGCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAAC           <  SRR4302540.4146882/94‑1 (MQ=60)

                                                                                    GCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATTAGAAAATAGTTAAAAGTAAAGATAACA          >  SRR4302540.7604425/1‑94 (MQ=60)

                                                                                    GCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACA          <  SRR4302540.3913720/94‑1 (MQ=60)

                                                                                    GCTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACA          <  SRR4302540.9233451/94‑1 (MQ=60)

                                                                                     CTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAA         >  SRR4302540.8454758/1‑94 (MQ=60)

                                                                                     CTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAA         <  SRR4302540.2065207/94‑1 (MQ=60)

                                                                                     CTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAA         >  SRR4302540.6786787/1‑94 (MQ=60)

                                                                                     CTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAA         >  SRR4302540.9751570/1‑94 (MQ=60)

                                                                                     CTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAA         >  SRR4302540.6145586/1‑94 (MQ=60)

                                                                                     CTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAA         >  SRR4302540.3505578/1‑94 (MQ=60)

                                                                                     CTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAA         <  SRR4302540.516706/94‑1 (MQ=60)

                                                                                     CTTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAA         <  SRR4302540.4921606/94‑1 (MQ=60)

                                                                                      TTATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAAT        >  SRR4302540.1148494/1‑94 (MQ=60)

                                                                                       TATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATA       >  SRR4302540.5674653/1‑94 (MQ=60)

                                                                                       TATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATA       <  SRR4302540.8133707/94‑1 (MQ=60)

                                                                                       TATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATA       >  SRR4302540.1883651/1‑94 (MQ=60)

                                                                                       TATCATGCTCATGGTGCAGATAGTCACGGGGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGTAAATAGTTAAAAGCAGAGATAACAATA       >  SRR4302540.5512881/1‑94 (MQ=60)

                                                                                       TATCATGCTAAAGGTGCAGATAGTCACGGAGAATATTTGGCCGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGAGAACAATA       <  SRR4302540.2505712/94‑1 (MQ=60)

                                                                                        ATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATAT      <  SRR4302540.8842885/94‑1 (MQ=60)

                                                                                        ATCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATAT      <  SRR4302540.8232479/94‑1 (MQ=60)

                                                                                         TCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATC     >  SRR4302540.3971279/1‑94 (MQ=60)

                                                                                         TCATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATC     >  SRR4302540.6707568/1‑94 (MQ=60)

                                                                                          CATTCTCATGTGGCAGATTGTCATTGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCA    <  SRR4302540.3796401/94‑1 (MQ=60)

                                                                                          CATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCA    <  SRR4302540.9669042/94‑1 (MQ=60)

                                                                                           ATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATCTCAA   >  SRR4302540.5224724/1‑94 (MQ=60)

                                                                                           ATGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAA   >  SRR4302540.9627367/1‑94 (MQ=60)

                                                                                            TGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAAG  <  SRR4302540.5270462/94‑1 (MQ=60)

                                                                                            TGCTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAAG  >  SRR4302540.5442663/1‑94 (MQ=60)

TTCTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATACTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAAG  >  NC_000913/3620759‑3620944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`