Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,637,944	T→C	H68H (CAT→CAC)	uspA →	universal stress protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,637,944	0	T	C	99.8%	1568.0 / ‑5.4	478	H68H (CAT→CAC)	uspA	universal stress protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (249/228); total (250/228)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.21e-01

Only 100 of 509 total aligned reads displayed.

CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGC  >  NC_000913/3637854‑3638033

cGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGc                                                                                         <  2:1186154/93‑1 (MQ=255)

 gTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCa                                                                                        >  1:9306335/1‑93 (MQ=255)

 gTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCa                                                                                        >  1:9911050/1‑93 (MQ=255)

  tAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAc                                                                                       <  1:3922421/93‑1 (MQ=255)

   aGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACt                                                                                      >  2:6795285/1‑93 (MQ=255)

   aGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACt                                                                                      <  1:3671875/93‑1 (MQ=255)

    gATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTg                                                                                     >  1:6593962/1‑93 (MQ=255)

    gATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTg                                                                                     <  1:6774215/93‑1 (MQ=255)

     aTGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGa                                                                                    <  1:8731254/93‑1 (MQ=255)

      tGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAc                                                                                   >  1:7265309/1‑93 (MQ=255)

      tGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAc                                                                                   <  2:7455870/93‑1 (MQ=255)

         aaaCTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGa                                                                                <  1:8885060/93‑1 (MQ=255)

         aaaCTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGa                                                                                <  1:7935349/93‑1 (MQ=255)

          aaCTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGac                                                                               >  1:2699469/1‑92 (MQ=255)

          aaCTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAg                                                                               >  1:7603888/1‑93 (MQ=255)

           actactCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGc                                                                              >  1:301512/1‑93 (MQ=255)

             tactCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCtt                                                                            >  1:2087940/1‑93 (MQ=255)

              actCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCttt                                                                           >  1:4307317/1‑93 (MQ=255)

              actCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCttt                                                                           <  1:6432495/93‑1 (MQ=255)

               ctctGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTc                                                                          <  1:8341194/93‑1 (MQ=255)

                 ctGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCa                                                                        >  1:2952722/1‑93 (MQ=255)

                  tGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAc                                                                       >  1:4165913/1‑93 (MQ=255)

                  tGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAc                                                                       <  1:1328250/93‑1 (MQ=255)

                    aCCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTa                                                                     <  2:5400908/93‑1 (MQ=255)

                     ccTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTaa                                                                    <  1:3529608/93‑1 (MQ=255)

                       tataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATg                                                                  >  2:2944820/1‑93 (MQ=255)

                       tataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATg                                                                  >  2:4985684/1‑93 (MQ=255)

                       tataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATg                                                                  >  2:6362735/1‑93 (MQ=255)

                        ataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGc                                                                 >  2:7278145/1‑93 (MQ=255)

                         taCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCa                                                                >  1:8059645/1‑93 (MQ=255)

                         taCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCAGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCa                                                                <  2:4446263/93‑1 (MQ=255)

                              cGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTa                                                           <  1:222041/93‑1 (MQ=255)

                               gggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAc                                                          <  2:3445864/93‑1 (MQ=255)

                                ggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAcc                                                         <  1:9407330/93‑1 (MQ=255)

                                   ttATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCaa                                                      >  1:5198336/1‑93 (MQ=255)

                                   ttATTGATGTGAATCTGGGGGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCaa                                                      >  2:3744271/1‑93 (MQ=255)

                                    tATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAt                                                     <  2:8506517/93‑1 (MQ=255)

                                    tATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAt                                                     >  2:8102249/1‑93 (MQ=255)

                                    tATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAt                                                     >  2:2343315/1‑93 (MQ=255)

                                    tATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAt                                                     <  1:5842970/93‑1 (MQ=255)

                                     aTTGATGTGAATCTGGGTTATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATc                                                    >  2:6169327/1‑93 (MQ=255)

                                     aTTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAta                                                    >  2:2740400/1‑92 (MQ=255)

                                     aTTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATc                                                    >  1:7007840/1‑93 (MQ=255)

                                      ttGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCa                                                   <  1:4993995/93‑1 (MQ=255)

                                      ttGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCa                                                   <  2:4208529/93‑1 (MQ=255)

                                        gATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACt                                                 >  1:2523981/1‑93 (MQ=255)

                                         aTGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTg                                                <  1:5923333/93‑1 (MQ=255)

                                            tgAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGaaa                                             >  2:8201547/1‑93 (MQ=255)

                                            tgAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCACGCTAACGAATGACTGcaa                                             >  1:737221/1‑93 (MQ=255)

                                               aTCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAccc                                          >  2:8742354/1‑93 (MQ=255)

                                               aTCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAccc                                          <  1:1232685/93‑1 (MQ=255)

                                                tCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCt                                         <  2:3343400/93‑1 (MQ=255)

                                                tCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGCCTACCCAATCACTGAAACCCt                                         <  2:6447400/93‑1 (MQ=255)

                                                 cTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTg                                        <  1:5548003/93‑1 (MQ=255)

                                                 cTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTg                                        >  2:8834197/1‑93 (MQ=255)

                                                 cTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTg                                        <  2:9210276/93‑1 (MQ=255)

                                                  tGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACT‑ATGCAGGCTACCCAATCACTGAAACCCTGag                                      <  1:641218/93‑1 (MQ=255)

                                                   tggTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGag                                      <  1:6227032/92‑1 (MQ=255)

                                                   gggTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGag                                      <  1:6974982/93‑1 (MQ=255)

                                                    ggTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagc                                     >  1:1467390/1‑93 (MQ=255)

                                                       gATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggc                                  >  2:5225837/1‑93 (MQ=255)

                                                           tGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcagcg                              >  1:1919579/1‑93 (MQ=255)

                                                           tGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcgacagcg                              >  1:6334527/1‑93 (MQ=255)

                                                             cAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcagcggc                            <  2:4817765/93‑1 (MQ=255)

                                                             cAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcagcggc                            >  1:4418768/1‑93 (MQ=255)

                                                               gAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGa                          >  2:6665569/1‑93 (MQ=255)

                                                               gAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGa                          <  2:7701379/93‑1 (MQ=255)

                                                                 aaCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGAcc                        <  1:9031334/93‑1 (MQ=255)

                                                                  aCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCt                       <  1:1979829/93‑1 (MQ=255)

                                                                   cGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTg                      <  2:7135249/93‑1 (MQ=255)

                                                                   cGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTGTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTg                      <  1:5325490/93‑1 (MQ=255)

                                                                    gCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTgg                     <  1:4093023/93‑1 (MQ=255)

                                                                    gCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTgg                     <  1:4731899/93‑1 (MQ=255)

                                                                     cATCTCTGAAGAGACACATCACGCACTGACCGAGCGTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTggg                    >  2:2660221/1‑93 (MQ=255)

                                                                      ctctcTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGc                   <  2:6037982/92‑1 (MQ=255)

                                                                      aTCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGc                   <  2:1548952/93‑1 (MQ=255)

                                                                       tctcTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGcc                  >  1:6059192/1‑93 (MQ=255)

                                                                       tctcTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGcc                  >  1:10032121/1‑93 (MQ=255)

                                                                         tctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAg                <  2:3042102/93‑1 (MQ=255)

                                                                          ctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAgg               <  1:9798226/93‑1 (MQ=255)

                                                                           tGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGt              >  2:177070/1‑93 (MQ=255)

                                                                            gAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGtt             >  2:5619796/1‑93 (MQ=255)

                                                                            gAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGtt             >  2:9436194/1‑93 (MQ=255)

                                                                            gAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGtt             >  2:1646631/1‑93 (MQ=255)

                                                                             aaGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGGTc            >  2:9732855/1‑93 (MQ=255)

                                                                              agagACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCt           <  2:3867743/93‑1 (MQ=255)

                                                                              agagACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCt           >  2:2266694/1‑93 (MQ=255)

                                                                               gagaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTg          >  2:4626542/1‑93 (MQ=255)

                                                                               gagaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTg          >  2:7020866/1‑93 (MQ=255)

                                                                                agaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTCAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTgg         >  1:4877856/1‑93 (MQ=255)

                                                                                 gaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGt        <  2:3629133/93‑1 (MQ=255)

                                                                                 gaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGt        <  2:1960137/93‑1 (MQ=255)

                                                                                 gaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGt        <  1:6900384/93‑1 (MQ=255)

                                                                                  acacATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTc       >  1:5470887/1‑93 (MQ=255)

                                                                                  acacATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTc       <  1:2289696/93‑1 (MQ=255)

                                                                                  acacATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTc       >  2:9541696/1‑93 (MQ=255)

                                                                                   cacaTCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCg      >  1:4483644/1‑93 (MQ=255)

                                                                                    acaTCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGa     >  1:5704695/1‑93 (MQ=255)

                                                                                     catcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAt    >  1:3747149/1‑93 (MQ=255)

                                                                                     catcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAt    <  1:1100743/93‑1 (MQ=255)

CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGC  >  NC_000913/3637854‑3638033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 300 total aligned reads displayed.

CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC  >  NC_000913/3637851‑3638037

CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCAC                                                                                               >  SRR4302540.2054294/1‑94 (MQ=60)

CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCAC                                                                                               <  SRR4302540.3775749/94‑1 (MQ=60)

CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCAC                                                                                               >  SRR4302540.7026826/1‑94 (MQ=60)

 CACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCCTCTCTGAAGAGACACATCACG                                                                                              >  SRR4302540.4361494/1‑94 (MQ=60)

 CACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACG                                                                                              >  SRR4302540.3246694/1‑94 (MQ=60)

   CGTAGATGTAAACTACTCTGACCTATGCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCA                                                                                            <  SRR4302540.4262971/94‑1 (MQ=60)

   CGTAGATGTAAACTACTCTGACCTATCCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCA                                                                                            <  SRR4302540.4009483/94‑1 (MQ=60)

   CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCA                                                                                            >  SRR4302540.10026811/1‑94 (MQ=60)

   CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCA                                                                                            >  SRR4302540.9417469/1‑94 (MQ=60)

    GTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAC                                                                                           >  SRR4302540.2526247/1‑94 (MQ=60)

    GTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAC                                                                                           >  SRR4302540.1979255/1‑94 (MQ=60)

    GTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAC                                                                                           <  SRR4302540.694917/94‑1 (MQ=60)

    GTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAC                                                                                           <  SRR4302540.9795022/94‑1 (MQ=60)

    GTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAC                                                                                           >  SRR4302540.6495668/1‑94 (MQ=60)

    GTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAC                                                                                           >  SRR4302540.6495667/1‑94 (MQ=60)

     TAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACT                                                                                          <  SRR4302540.6856634/94‑1 (MQ=60)

      AGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTG                                                                                         <  SRR4302540.7027926/94‑1 (MQ=60)

      AGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTG                                                                                         >  SRR4302540.7600813/1‑94 (MQ=60)

      AGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTG                                                                                         >  SRR4302540.5646671/1‑94 (MQ=60)

      AGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTG                                                                                         <  SRR4302540.5955006/94‑1 (MQ=60)

      AGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTG                                                                                         >  SRR4302540.6666988/1‑94 (MQ=60)

       GATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGA                                                                                        <  SRR4302540.6849084/94‑1 (MQ=60)

        ATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAC                                                                                       <  SRR4302540.8832651/94‑1 (MQ=60)

        ATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAC                                                                                       >  SRR4302540.7358844/1‑94 (MQ=60)

        ATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAC                                                                                       >  SRR4302540.7346377/1‑94 (MQ=60)

         TGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACC                                                                                      <  SRR4302540.10003299/94‑1 (MQ=60)

         TGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACC                                                                                      <  SRR4302540.2302052/94‑1 (MQ=60)

         TGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACC                                                                                      <  SRR4302540.9957594/94‑1 (MQ=60)

          GTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCG                                                                                     <  SRR4302540.4030875/94‑1 (MQ=60)

          GTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCG                                                                                     <  SRR4302540.429997/94‑1 (MQ=60)

          GTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCG                                                                                     >  SRR4302540.6009900/1‑94 (MQ=60)

          GTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCG                                                                                     <  SRR4302540.6156964/94‑1 (MQ=60)

            AAACTTCTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAG                                                                                   <  SRR4302540.2205079/94‑1 (MQ=60)

            AAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAG                                                                                   <  SRR4302540.8027838/94‑1 (MQ=60)

            AAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAG                                                                                   <  SRR4302540.8987904/94‑1 (MQ=60)

            AAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAC                                                                                   >  SRR4302540.2728605/1‑94 (MQ=60)

               CTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTT                                                                                >  SRR4302540.2110375/1‑94 (MQ=60)

               ATACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTT                                                                                <  SRR4302540.2247217/94‑1 (MQ=60)

                 ACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTC                                                                              >  SRR4302540.2754375/1‑94 (MQ=60)

                 ACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTC                                                                              >  SRR4302540.4751832/1‑94 (MQ=60)

                 ACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTC                                                                              >  SRR4302540.9872048/1‑94 (MQ=60)

                  CTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCC                                                                             <  SRR4302540.8438010/94‑1 (MQ=60)

                  CTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCC                                                                             <  SRR4302540.9427597/94‑1 (MQ=60)

                   TCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCA                                                                            >  SRR4302540.2985233/1‑94 (MQ=60)

                    CTGACCTATACACCGGGCTTATTGCTGTGAATCTGGGTGATCTGCAGAAACGCATCTCTGCAGCGACACATCACGCACTGACCGAGCTTTCCAC                                                                           <  SRR4302540.9065568/94‑1 (MQ=60)

                    CTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAC                                                                           <  SRR4302540.9002695/94‑1 (MQ=60)

                    CTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAC                                                                           <  SRR4302540.4076156/94‑1 (MQ=60)

                    CTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAC                                                                           >  SRR4302540.4156380/1‑94 (MQ=60)

                    CTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAC                                                                           >  SRR4302540.4211077/1‑94 (MQ=60)

                    CTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAC                                                                           <  SRR4302540.5164254/94‑1 (MQ=60)

                     TGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCTAGCTTTCCACT                                                                          >  SRR4302540.8401560/1‑94 (MQ=60)

                     TGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACT                                                                          <  SRR4302540.10066233/94‑1 (MQ=60)

                      GACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTA                                                                         >  SRR4302540.5815642/1‑94 (MQ=60)

                       ACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAA                                                                        <  SRR4302540.6473049/94‑1 (MQ=60)

                        CCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAT                                                                       <  SRR4302540.3568115/94‑1 (MQ=60)

                        CCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAT                                                                       <  SRR4302540.4866767/94‑1 (MQ=60)

                        CCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAT                                                                       <  SRR4302540.9203326/94‑1 (MQ=60)

                        CCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAT                                                                       >  SRR4302540.3817933/1‑94 (MQ=60)

                         CTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATG                                                                      >  SRR4302540.8269737/1‑94 (MQ=60)

                         CTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATG                                                                      >  SRR4302540.852237/1‑94 (MQ=60)

                         CTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATG                                                                      <  SRR4302540.2451475/94‑1 (MQ=60)

                           ATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCA                                                                    >  SRR4302540.8153211/1‑94 (MQ=60)

                           ATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCA                                                                    >  SRR4302540.5852911/1‑94 (MQ=60)

                           ATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCA                                                                    <  SRR4302540.4790912/94‑1 (MQ=60)

                            TACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAG                                                                   <  SRR4302540.2115733/94‑1 (MQ=60)

                            TACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAG                                                                   <  SRR4302540.3127422/94‑1 (MQ=60)

                             ACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGG                                                                  <  SRR4302540.5685972/94‑1 (MQ=60)

                             ACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGG                                                                  <  SRR4302540.5564304/94‑1 (MQ=60)

                              CACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGC                                                                 <  SRR4302540.8126161/94‑1 (MQ=60)

                              CACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGC                                                                 >  SRR4302540.7080024/1‑94 (MQ=60)

                               ACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCT                                                                <  SRR4302540.6076676/94‑1 (MQ=60)

                               ACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCT                                                                >  SRR4302540.8115675/1‑94 (MQ=60)

                                CCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTC                                                               >  SRR4302540.3574216/1‑94 (MQ=60)

                                CCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTA                                                               >  SRR4302540.8933391/1‑94 (MQ=60)

                                 CGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAC                                                              <  SRR4302540.224191/94‑1 (MQ=60)

                                  GGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACC                                                             >  SRR4302540.1621001/1‑94 (MQ=60)

                                  GGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACC                                                             <  SRR4302540.5532660/94‑1 (MQ=60)

                                   GGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCC                                                            <  SRR4302540.1033570/94‑1 (MQ=60)

                                   GGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCC                                                            <  SRR4302540.9519207/94‑1 (MQ=60)

                                   GGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCC                                                            >  SRR4302540.1389463/1‑94 (MQ=60)

                                   GGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCC                                                            <  SRR4302540.1033571/94‑1 (MQ=60)

                                    GCTTATTGATGTGAATCTGGGTGATATGCAGAAAAGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGATACCCA                                                           >  SRR4302540.1977596/1‑94 (MQ=60)

                                      TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAC                                                         >  SRR4302540.6483441/1‑94 (MQ=60)

                                      TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT                                                         >  SRR4302540.7103265/1‑94 (MQ=60)

                                      TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT                                                         <  SRR4302540.4503356/94‑1 (MQ=60)

                                      TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT                                                         <  SRR4302540.1202279/94‑1 (MQ=60)

                                      TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT                                                         >  SRR4302540.6587247/1‑94 (MQ=60)

                                       TATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATC                                                        <  SRR4302540.5907587/94‑1 (MQ=60)

                                       TATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATC                                                        >  SRR4302540.7085627/1‑94 (MQ=60)

                                       TATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATC                                                        >  SRR4302540.7083958/1‑94 (MQ=60)

                                       TATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATC                                                        >  SRR4302540.4452615/1‑94 (MQ=60)

                                        ATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCA                                                       <  SRR4302540.6441152/94‑1 (MQ=60)

                                        ATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCA                                                       <  SRR4302540.6779816/94‑1 (MQ=60)

                                        ATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCA                                                       <  SRR4302540.4697841/94‑1 (MQ=60)

                                         TTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCAC                                                      <  SRR4302540.5048058/94‑1 (MQ=60)

                                         TTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCAC                                                      >  SRR4302540.639648/1‑94 (MQ=60)

                                         TTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCAC                                                      >  SRR4302540.1250773/1‑94 (MQ=60)

                                         TTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCAC                                                      <  SRR4302540.4806653/94‑1 (MQ=60)

                                         TTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATAACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCAC                                                      >  SRR4302540.3688832/1‑94 (MQ=60)

                                          TGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACT                                                     <  SRR4302540.6708094/94‑1 (MQ=60)

                                          TGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACT                                                     >  SRR4302540.2551227/1‑94 (MQ=60)

                                           GATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTG                                                    >  SRR4302540.4420109/1‑94 (MQ=60)

                                            ATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGA                                                   <  SRR4302540.5988779/94‑1 (MQ=60)

                                            ATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGA                                                   <  SRR4302540.1376521/94‑1 (MQ=60)

                                             TGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAA                                                  >  SRR4302540.1483129/1‑94 (MQ=60)

                                             TGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAA                                                  <  SRR4302540.4501178/94‑1 (MQ=60)

                                             TGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAA                                                  >  SRR4302540.4159224/1‑94 (MQ=60)

                                              GTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAcgctaacgaatgactgcaa                                                 >  SRR4302540.745096/1‑75 (MQ=60)

                                                GAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACC                                               >  SRR4302540.6302641/1‑94 (MQ=60)

                                                 AATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCC                                              <  SRR4302540.1175663/94‑1 (MQ=60)

                                                 AATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCC                                              >  SRR4302540.7682050/1‑94 (MQ=60)

                                                 AATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCC                                              <  SRR4302540.2014392/94‑1 (MQ=60)

                                                  ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT                                             >  SRR4302540.1904759/1‑94 (MQ=60)

                                                  ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT                                             <  SRR4302540.3770822/94‑1 (MQ=60)

                                                  ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT                                             <  SRR4302540.1245272/94‑1 (MQ=60)

                                                   TCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTG                                            <  SRR4302540.754041/94‑1 (MQ=60)

                                                    CTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGA                                           >  SRR4302540.4368671/1‑94 (MQ=60)

                                                    CTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGA                                           >  SRR4302540.1767206/1‑94 (MQ=60)

                                                     TGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAG                                          >  SRR4302540.9639438/1‑94 (MQ=60)

                                                     CGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAG                                          <  SRR4302540.943074/94‑1 (MQ=60)

                                                      GGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGC                                         >  SRR4302540.1483403/1‑94 (MQ=60)

                                                      GGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGC                                         <  SRR4302540.648050/94‑1 (MQ=60)

                                                      GGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGC                                         <  SRR4302540.6296287/94‑1 (MQ=60)

                                                       GGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCG                                        <  SRR4302540.5875595/94‑1 (MQ=60)

                                                       GGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCG                                        <  SRR4302540.501041/94‑1 (MQ=60)

                                                        GTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGG                                       >  SRR4302540.5954025/1‑94 (MQ=60)

                                                         TGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGC                                      <  SRR4302540.5630863/94‑1 (MQ=60)

                                                          GATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCA                                     >  SRR4302540.385959/1‑94 (MQ=60)

                                                          GATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCA                                     <  SRR4302540.3013946/94‑1 (MQ=60)

                                                           ATATACAGAAACGCATCTCTGAAGAGACACATCACGCACTGCCCGATCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAG                                    <  SRR4302540.4518390/94‑1 (MQ=60)

                                                             ATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCG                                  >  SRR4302540.6519396/1‑94 (MQ=60)

                                                             ATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCG                                  >  SRR4302540.2647281/1‑94 (MQ=60)

                                                             ATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCG                                  >  SRR4302540.8754317/1‑94 (MQ=60)

                                                             ATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCG                                  >  SRR4302540.1940522/1‑94 (MQ=60)

                                                             ATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCG                                  >  SRR4302540.3729110/1‑94 (MQ=60)

                                                             ATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCG                                  <  SRR4302540.4596406/94‑1 (MQ=60)

                                                             ATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGACAGCG                                  >  SRR4302540.6405064/1‑94 (MQ=60)

                                                              TGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGG                                 >  SRR4302540.736235/1‑94 (MQ=60)

                                                               GCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGC                                <  SRR4302540.5508737/94‑1 (MQ=60)

                                                                CAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCG                               >  SRR4302540.6166311/1‑94 (MQ=60)

                                                                CAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCG                               >  SRR4302540.5061962/1‑94 (MQ=60)

                                                                 AGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGA                              >  SRR4302540.8946355/1‑94 (MQ=60)

                                                                 AGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGA                              <  SRR4302540.6983023/94‑1 (MQ=60)

                                                                  GAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGAC                             >  SRR4302540.2007586/1‑94 (MQ=60)

                                                                  GAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGAC                             <  SRR4302540.6877504/94‑1 (MQ=60)

                                                                   AAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACC                            <  SRR4302540.5420730/94‑1 (MQ=60)

                                                                    AACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCT                           <  SRR4302540.9169906/94‑1 (MQ=60)

                                                                    AACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCT                           <  SRR4302540.4638073/94‑1 (MQ=60)

                                                                    AACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCT                           >  SRR4302540.236136/1‑94 (MQ=60)

                                                                     ACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCCGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTG                          >  SRR4302540.3869980/1‑94 (MQ=60)

                                                                     ACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTG                          <  SRR4302540.2001308/94‑1 (MQ=60)

                                                                     ACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTG                          >  SRR4302540.3869979/1‑94 (MQ=60)

                                                                      CGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGG                         <  SRR4302540.373299/94‑1 (MQ=60)

                                                                      CGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGG                         >  SRR4302540.7941594/1‑94 (MQ=60)

                                                                      CGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGG                         <  SRR4302540.2919934/94‑1 (MQ=60)

                                                                      CGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTGTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGG                         <  SRR4302540.5383819/94‑1 (MQ=60)

                                                                       GCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGG                        <  SRR4302540.4137181/94‑1 (MQ=60)

                                                                         ATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCC                      >  SRR4302540.10148816/1‑94 (MQ=60)

                                                                         ATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCC                      >  SRR4302540.6126533/1‑94 (MQ=60)

                                                                          TCTCTGCAGAGACACATCACGCCCTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTCAACCCCTGAGCGGCAGCGGCGACCTGGGCCA                     <  SRR4302540.5318130/94‑1 (MQ=60)

                                                                          TCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCG                     >  SRR4302540.8538351/1‑94 (MQ=60)

                                                                           CTCTGAAGAGACACACCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAG                    <  SRR4302540.5540968/94‑1 (MQ=60)

                                                                             CTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGT                  >  SRR4302540.3570065/1‑94 (MQ=60)

                                                                             CTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGT                  <  SRR4302540.525870/94‑1 (MQ=60)

                                                                             CTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGT                  >  SRR4302540.2647432/1‑94 (MQ=60)

                                                                              TGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTT                 <  SRR4302540.5184822/94‑1 (MQ=60)

                                                                                AAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTGCCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCT               <  SRR4302540.5269233/94‑1 (MQ=60)

                                                                                 AGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTG              <  SRR4302540.3058904/94‑1 (MQ=60)

                                                                                 AGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTG              <  SRR4302540.3034073/94‑1 (MQ=60)

                                                                                 AGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTG              <  SRR4302540.6522461/94‑1 (MQ=60)

                                                                                  GAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTCAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGG             >  SRR4302540.4930224/1‑94 (MQ=60)

                                                                                   AGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGT            >  SRR4302540.5012520/1‑94 (MQ=60)

                                                                                   AGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGT            >  SRR4302540.7322459/1‑94 (MQ=60)

                                                                                    GACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTC           <  SRR4302540.9119364/94‑1 (MQ=60)

                                                                                    GACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTC           >  SRR4302540.5531111/1‑94 (MQ=60)

                                                                                    GACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTC           >  SRR4302540.2294138/1‑94 (MQ=60)

                                                                                     ACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTTGTCG          >  SRR4302540.4532275/1‑94 (MQ=60)

                                                                                     ACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCG          >  SRR4302540.2863007/1‑94 (MQ=60)

                                                                                      CACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGA         <  SRR4302540.7770634/94‑1 (MQ=60)

                                                                                      CACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGA         <  SRR4302540.7770633/94‑1 (MQ=60)

                                                                                      CACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGA         >  SRR4302540.5767501/1‑94 (MQ=60)

                                                                                       CCATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAT        <  SRR4302540.3038474/94‑1 (MQ=60)

                                                                                       ACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAT        >  SRR4302540.6264343/1‑94 (MQ=60)

                                                                                       ACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAT        <  SRR4302540.6241299/94‑1 (MQ=60)

                                                                                       ACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAT        <  SRR4302540.1304974/94‑1 (MQ=60)

                                                                                       ACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAT        >  SRR4302540.717637/1‑94 (MQ=60)

                                                                                       ACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAT        <  SRR4302540.9362061/94‑1 (MQ=60)

                                                                                        CATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATG       <  SRR4302540.9921458/94‑1 (MQ=60)

                                                                                        CATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATG       <  SRR4302540.1112084/94‑1 (MQ=60)

                                                                                        CATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATG       >  SRR4302540.69944/1‑94 (MQ=60)

                                                                                          TCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCA     <  SRR4302540.7071025/94‑1 (MQ=60)

                                                                                          TCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCA     <  SRR4302540.4334013/94‑1 (MQ=60)

                                                                                           CACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAA    <  SRR4302540.8215095/94‑1 (MQ=60)

                                                                                           CACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAA    <  SRR4302540.3284345/94‑1 (MQ=60)

                                                                                           CACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAA    <  SRR4302540.7460990/94‑1 (MQ=60)

                                                                                            ACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAAT   <  SRR4302540.1163408/94‑1 (MQ=60)

                                                                                            ACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAAT   >  SRR4302540.755082/1‑94 (MQ=60)

                                                                                             CGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC  <  SRR4302540.1302067/94‑1 (MQ=60)

                                                                                             CGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC  <  SRR4302540.2219680/94‑1 (MQ=60)

                                                                                             CGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCGGGGCCAGGGTCTGGTCGATGCAATC  <  SRR4302540.8270624/94‑1 (MQ=60)

CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC  >  NC_000913/3637851‑3638037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`