Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,637,944 |
T→C |
H68H (CAT→CAC) |
uspA → |
universal stress protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,637,944 | 0 | T | C | 100.0%
| 922.3
/ NA
| 282 | H68H (CAT→CAC) | uspA | universal stress protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (156/126); total (156/126) |
Only 100 of 290 total aligned reads displayed.
CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGC > NC_000913/3637854‑3638033
|
cGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGc < 1:2833775/93‑1 (MQ=255)
gTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCa < 1:6253723/93‑1 (MQ=255)
gTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCa > 1:1780533/1‑93 (MQ=255)
tAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAc > 1:4335666/1‑93 (MQ=255)
gATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTg < 1:397933/93‑1 (MQ=255)
tGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAc < 1:830/93‑1 (MQ=255)
tGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAc < 2:6295280/93‑1 (MQ=255)
tAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCg > 1:6100296/1‑93 (MQ=255)
aaCTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAg > 2:2462819/1‑93 (MQ=255)
tactCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCtt > 2:3150509/1‑93 (MQ=255)
tactCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCtt > 2:2824476/1‑93 (MQ=255)
tactCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCtt < 2:5252457/93‑1 (MQ=255)
tactCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCtt > 2:4876601/1‑93 (MQ=255)
tctGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTcc < 1:917365/93‑1 (MQ=255)
tctGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTcc > 2:434253/1‑93 (MQ=255)
tctGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTcc > 1:1689974/1‑93 (MQ=255)
ctGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCa < 1:521855/93‑1 (MQ=255)
tGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAc < 1:3906503/93‑1 (MQ=255)
gACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACt > 2:1581399/1‑93 (MQ=255)
aCCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTa > 1:4446304/1‑93 (MQ=255)
ccTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTaa < 1:4822300/93‑1 (MQ=255)
cTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAt < 2:1723927/93‑1 (MQ=255)
tataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATg > 2:1942099/1‑93 (MQ=255)
tataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATg > 1:5999037/1‑93 (MQ=255)
tataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATg > 1:2054038/1‑93 (MQ=255)
ataCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGc > 1:3698552/1‑93 (MQ=255)
taCACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCa > 2:1824559/1‑93 (MQ=255)
acCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGc > 1:5318606/1‑93 (MQ=255)
acCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGc < 1:5048199/93‑1 (MQ=255)
gggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAc < 2:1532411/93‑1 (MQ=255)
gggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAc > 2:3523181/1‑93 (MQ=255)
ggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAcc > 1:5615368/1‑93 (MQ=255)
ggCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAcc > 2:747135/1‑93 (MQ=255)
gCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAccc > 1:3557376/1‑93 (MQ=255)
gCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAccc > 1:280859/1‑93 (MQ=255)
cTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCa < 2:891736/93‑1 (MQ=255)
tATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAt < 1:3787937/93‑1 (MQ=255)
tATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAt > 2:3289952/1‑93 (MQ=255)
tATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAt < 1:590248/93‑1 (MQ=255)
aTTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATc > 1:704488/1‑93 (MQ=255)
aTTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATc > 1:2904656/1‑93 (MQ=255)
ttGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCa > 2:6083071/1‑93 (MQ=255)
ttGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCa > 2:3841329/1‑93 (MQ=255)
gATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACt > 1:4109120/1‑93 (MQ=255)
aTGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTg > 1:4418532/1‑93 (MQ=255)
gtgAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGaa > 2:2921978/1‑93 (MQ=255)
tgAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGaaa < 1:4762994/93‑1 (MQ=255)
gAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAc < 1:1563525/93‑1 (MQ=255)
gAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAc > 2:2597738/1‑93 (MQ=255)
gAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAc > 1:195254/1‑93 (MQ=255)
gAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAc < 1:3518849/93‑1 (MQ=255)
aTCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAccc < 2:195482/93‑1 (MQ=255)
tCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCt < 1:2493239/93‑1 (MQ=255)
tGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGa < 2:5683400/93‑1 (MQ=255)
ggTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagc < 2:2304728/93‑1 (MQ=255)
gATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggc > 2:4680569/1‑93 (MQ=255)
tatGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcag > 2:2641237/1‑93 (MQ=255)
tatGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcag > 1:2293741/1‑93 (MQ=255)
atGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcagc < 1:2637733/93‑1 (MQ=255)
atGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcagc < 1:3051082/93‑1 (MQ=255)
tGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcagcg < 2:5861339/93‑1 (MQ=255)
gCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcagcgg > 1:4565047/1‑93 (MQ=255)
cAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGagcggcagcggc < 1:5404912/93‑1 (MQ=255)
gAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTATCCAATCACTGAAACCCCGAGCGGCAGCGGCGa < 2:125597/93‑1 (MQ=255)
gAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGa > 2:2748922/1‑93 (MQ=255)
gAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGa > 1:4728475/1‑93 (MQ=255)
aaaCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGAc < 1:1898818/93‑1 (MQ=255)
gCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTgg < 1:3335511/93‑1 (MQ=255)
gCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTgg > 2:1372307/1‑93 (MQ=255)
gCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTgg > 2:3829237/1‑93 (MQ=255)
cATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTggg < 1:1254992/93‑1 (MQ=255)
aTCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGc > 2:4852858/1‑93 (MQ=255)
tctcTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAACCCCTGAGCGGCAGCGGCGACCTGGGcc < 1:5301641/93‑1 (MQ=255)
tctcTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGcc < 2:4962341/93‑1 (MQ=255)
tctcTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGcc < 2:3234455/93‑1 (MQ=255)
tctcTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGcc < 1:1014975/93‑1 (MQ=255)
tctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAg > 2:4206107/1‑93 (MQ=255)
tctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAg > 1:1115949/1‑93 (MQ=255)
tctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAg > 2:145066/1‑93 (MQ=255)
ctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCTgg > 1:4162157/1‑93 (MQ=255)
ctGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAgg > 1:1370093/1‑93 (MQ=255)
gAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGtt > 1:5472309/1‑93 (MQ=255)
gAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGtt > 2:5759279/1‑93 (MQ=255)
gAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGtt < 2:4704844/93‑1 (MQ=255)
aaGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTc > 2:3109357/1‑93 (MQ=255)
agagACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCCGGGTCt > 2:5158951/1‑93 (MQ=255)
agagACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCt < 2:5553256/93‑1 (MQ=255)
agagACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCt > 1:5796650/1‑93 (MQ=255)
agagACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGCGCCAGGTTCt > 1:5732501/1‑93 (MQ=255)
gagaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTg < 2:348982/93‑1 (MQ=255)
gagaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTg > 2:533269/1‑93 (MQ=255)
agaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTgg < 1:3623776/93‑1 (MQ=255)
gaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGt > 2:4187921/1‑93 (MQ=255)
gaCACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGt > 2:2379360/1‑93 (MQ=255)
cacaTCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCg < 1:4220036/93‑1 (MQ=255)
acaTCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGa < 2:2250754/93‑1 (MQ=255)
catcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAt > 1:2339879/1‑93 (MQ=255)
atcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATg > 2:2040312/1‑93 (MQ=255)
tcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGc > 2:4578049/1‑93 (MQ=255)
tcacGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGc > 1:2740646/1‑93 (MQ=255)
|
CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGC > NC_000913/3637854‑3638033
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC > NC_000913/3637851‑3638037
|
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCAC < SRR4302533.1814133/94‑1 (MQ=60)
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCAC > SRR4302533.5304646/1‑94 (MQ=60)
CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCAC > SRR4302533.1548808/1‑94 (MQ=60)
CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCA > SRR4302533.3379072/1‑94 (MQ=60)
CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCA > SRR4302533.1791371/1‑94 (MQ=60)
CGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCA < SRR4302533.2851220/94‑1 (MQ=60)
GTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAC < SRR4302533.6291127/94‑1 (MQ=60)
GTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAC > SRR4302533.1901482/1‑94 (MQ=60)
GTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCAC > SRR4302533.4361790/1‑94 (MQ=60)
TAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACT < SRR4302533.53269/94‑1 (MQ=60)
AGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTG > SRR4302533.3908818/1‑94 (MQ=60)
AGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTG > SRR4302533.906572/1‑94 (MQ=60)
GATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGA < SRR4302533.400338/94‑1 (MQ=60)
GATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGA > SRR4302533.5731389/1‑94 (MQ=60)
GATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGA > SRR4302533.3732160/1‑94 (MQ=60)
ATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGAC < SRR4302533.1540360/94‑1 (MQ=60)
TGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACC < SRR4302533.838/94‑1 (MQ=60)
GTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCG > SRR4302533.4058360/1‑94 (MQ=60)
GTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCG < SRR4302533.494866/94‑1 (MQ=60)
GTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCG < SRR4302533.4279156/94‑1 (MQ=60)
GTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCG > SRR4302533.6137133/1‑94 (MQ=60)
TAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGA > SRR4302533.5822508/1‑94 (MQ=60)
TAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGA > SRR4302533.234892/1‑94 (MQ=60)
AAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAG < SRR4302533.2908074/94‑1 (MQ=60)
AAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAG < SRR4302533.2780280/94‑1 (MQ=60)
AAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAG > SRR4302533.6112981/1‑94 (MQ=60)
ACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCT > SRR4302533.4143952/1‑94 (MQ=60)
CTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTT > SRR4302533.4185016/1‑94 (MQ=60)
CTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCC > SRR4302533.1700210/1‑94 (MQ=60)
CTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCC > SRR4302533.4218046/1‑94 (MQ=60)
CTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCC > SRR4302533.5782163/1‑94 (MQ=60)
TCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCA > SRR4302533.3989872/1‑94 (MQ=60)
TCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCA < SRR4302533.922755/94‑1 (MQ=60)
CTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAC > SRR4302533.6176181/1‑94 (MQ=60)
CTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAC < SRR4302533.1279668/94‑1 (MQ=60)
CTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCAC < SRR4302533.524951/94‑1 (MQ=60)
TGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACT < SRR4302533.3255584/94‑1 (MQ=60)
TGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACT < SRR4302533.3930366/94‑1 (MQ=60)
GACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTA > SRR4302533.4473196/1‑94 (MQ=60)
ACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAA > SRR4302533.196713/1‑94 (MQ=60)
CCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAAT < SRR4302533.4851519/94‑1 (MQ=60)
CTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATG < SRR4302533.4516602/94‑1 (MQ=60)
CTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATG > SRR4302533.6035374/1‑94 (MQ=60)
CTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATG > SRR4302533.2066711/1‑94 (MQ=60)
TATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGC > SRR4302533.3721268/1‑94 (MQ=60)
TACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAG > SRR4302533.4682844/1‑94 (MQ=60)
ACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGG < SRR4302533.2599800/94‑1 (MQ=60)
ACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGG < SRR4302533.4101664/94‑1 (MQ=60)
ACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGG < SRR4302533.546778/94‑1 (MQ=60)
CACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGC > SRR4302533.5350480/1‑94 (MQ=60)
CACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGC > SRR4302533.3597889/1‑94 (MQ=60)
ACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCT < SRR4302533.5078735/94‑1 (MQ=60)
ACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCT > SRR4302533.3544669/1‑94 (MQ=60)
CCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTA < SRR4302533.4648576/94‑1 (MQ=60)
CCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTA < SRR4302533.3672659/94‑1 (MQ=60)
CGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAC > SRR4302533.3699054/1‑94 (MQ=60)
CGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAC > SRR4302533.5053063/1‑94 (MQ=60)
GGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACC > SRR4302533.5649311/1‑94 (MQ=60)
GGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACC > SRR4302533.6113286/1‑94 (MQ=60)
GGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACC > SRR4302533.1119744/1‑94 (MQ=60)
GGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCC > SRR4302533.282573/1‑94 (MQ=60)
GGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCC > SRR4302533.3579297/1‑94 (MQ=60)
TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT > SRR4302533.1944057/1‑94 (MQ=60)
TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT > SRR4302533.827688/1‑94 (MQ=60)
TTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAAT > SRR4302533.2134957/1‑94 (MQ=60)
TATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATC > SRR4302533.2922495/1‑94 (MQ=60)
TATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATC < SRR4302533.3811134/94‑1 (MQ=60)
TATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATC < SRR4302533.593733/94‑1 (MQ=60)
TATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATC > SRR4302533.4461115/1‑94 (MQ=60)
TATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATC > SRR4302533.708651/1‑94 (MQ=60)
ATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCA > SRR4302533.705959/1‑94 (MQ=60)
TGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACT > SRR4302533.4134102/1‑94 (MQ=60)
TGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACT > SRR4302533.2989996/1‑94 (MQ=60)
GATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTG > SRR4302533.2868172/1‑94 (MQ=60)
GATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTG > SRR4302533.2826163/1‑94 (MQ=60)
GATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTG > SRR4302533.4445247/1‑94 (MQ=60)
TGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAA < SRR4302533.2508508/94‑1 (MQ=60)
TGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAA < SRR4302533.2662919/94‑1 (MQ=60)
TGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAC > SRR4302533.196484/1‑94 (MQ=60)
TGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAC < SRR4302533.4791881/94‑1 (MQ=60)
GAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACC < SRR4302533.3540542/94‑1 (MQ=60)
GAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACC < SRR4302533.1572936/94‑1 (MQ=60)
GAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTAACCAATCACTGAAACC > SRR4302533.2479590/1‑94 (MQ=60)
ATCTGGGTGATATGCAGAAGCGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT < SRR4302533.3157510/94‑1 (MQ=60)
ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT < SRR4302533.5526529/94‑1 (MQ=60)
ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT < SRR4302533.2282720/94‑1 (MQ=60)
ATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCT > SRR4302533.1885995/1‑94 (MQ=60)
TCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTG < SRR4302533.2508617/94‑1 (MQ=60)
CTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGA > SRR4302533.4812573/1‑94 (MQ=60)
CTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCGGA > SRR4302533.3463225/1‑94 (MQ=60)
TGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAG < SRR4302533.1602600/94‑1 (MQ=60)
TGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAG < SRR4302533.2770959/94‑1 (MQ=60)
TGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAG > SRR4302533.1314095/1‑94 (MQ=60)
GGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGC < SRR4302533.4827375/94‑1 (MQ=60)
GGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGC < SRR4302533.5427022/94‑1 (MQ=60)
GTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGG < SRR4302533.2585699/94‑1 (MQ=60)
GTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGG > SRR4302533.2987948/1‑94 (MQ=60)
GTGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGG < SRR4302533.5505744/94‑1 (MQ=60)
TGATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGC > SRR4302533.5345014/1‑94 (MQ=60)
ATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAG > SRR4302533.2307943/1‑94 (MQ=60)
ATATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAG < SRR4302533.4761926/94‑1 (MQ=60)
ATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCG > SRR4302533.1929096/1‑94 (MQ=60)
ATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCG < SRR4302533.2653944/94‑1 (MQ=60)
ATGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCG < SRR4302533.3069763/94‑1 (MQ=60)
TGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGG > SRR4302533.4592723/1‑94 (MQ=60)
TGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGG < SRR4302533.3781874/94‑1 (MQ=60)
TGCAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGG < SRR4302533.1224229/94‑1 (MQ=60)
CAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCG < SRR4302533.5437390/94‑1 (MQ=60)
CAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCG > SRR4302533.4303868/1‑94 (MQ=60)
CAGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCCTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCG > SRR4302533.4464761/1‑94 (MQ=60)
AGAAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGA > SRR4302533.4757142/1‑94 (MQ=60)
AAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACC < SRR4302533.3972619/94‑1 (MQ=60)
AAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACC < SRR4302533.1910414/94‑1 (MQ=60)
AAACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACC > SRR4302533.59817/1‑94 (MQ=60)
AACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCT > SRR4302533.5667151/1‑94 (MQ=60)
AACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCT < SRR4302533.5446338/94‑1 (MQ=60)
ACGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTG > SRR4302533.5937290/1‑94 (MQ=60)
CGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGACACCCTGAGCGGCAGCGGCGACCTCG > SRR4302533.1731510/1‑94 (MQ=60)
CGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGG < SRR4302533.4775316/94‑1 (MQ=60)
CGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGG < SRR4302533.3634960/94‑1 (MQ=60)
CGCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGG < SRR4302533.5125004/94‑1 (MQ=60)
GCATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGG < SRR4302533.3356120/94‑1 (MQ=60)
CATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCCGCGGCGACCTGGGC > SRR4302533.5349569/1‑94 (MQ=60)
CATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGC < SRR4302533.1262496/94‑1 (MQ=60)
CATCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGC > SRR4302533.1216937/1‑94 (MQ=60)
TCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAACCCCTGAGCGGCAGCGGCGACCTGGGCCA < SRR4302533.5333403/94‑1 (MQ=60)
TCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCA > SRR4302533.1703899/1‑94 (MQ=60)
TCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCA < SRR4302533.4232805/94‑1 (MQ=60)
TCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCA < SRR4302533.5187190/94‑1 (MQ=60)
TCTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCA < SRR4302533.1020935/94‑1 (MQ=60)
CTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAG < SRR4302533.1972717/94‑1 (MQ=60)
CTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAG < SRR4302533.5954036/94‑1 (MQ=60)
CTCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAG > SRR4302533.1122571/1‑94 (MQ=60)
TCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCTGG > SRR4302533.4187379/1‑94 (MQ=60)
TCTGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGG > SRR4302533.1378328/1‑94 (MQ=60)
TGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTT > SRR4302533.1600093/1‑94 (MQ=60)
TGAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTT > SRR4302533.5505289/1‑94 (MQ=60)
GAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTC < SRR4302533.1407362/94‑1 (MQ=60)
GAAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTC < SRR4302533.4405259/94‑1 (MQ=60)
AAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCT > SRR4302533.5831672/1‑94 (MQ=60)
AAGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGCGCCAGGTTCT > SRR4302533.5767108/1‑94 (MQ=60)
AGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTG < SRR4302533.852667/94‑1 (MQ=60)
AGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTG < SRR4302533.2845955/94‑1 (MQ=60)
AGAGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAAACCTGAGCGGCAGCGGCGACCTGGGCCCGGATCTG > SRR4302533.3838072/1‑94 (MQ=60)
AGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGT < SRR4302533.5911503/94‑1 (MQ=60)
AGACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGT < SRR4302533.3646077/94‑1 (MQ=60)
GACACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTC > SRR4302533.531798/1‑94 (MQ=60)
CACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGA < SRR4302533.4245553/94‑1 (MQ=60)
CACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGA > SRR4302533.4482517/1‑94 (MQ=60)
ACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAT > SRR4302533.2354368/1‑94 (MQ=60)
ACATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGAT < SRR4302533.2696014/94‑1 (MQ=60)
CATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATG < SRR4302533.6343164/94‑1 (MQ=60)
CATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATG > SRR4302533.6188581/1‑94 (MQ=60)
ATCACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGC > SRR4302533.2757453/1‑94 (MQ=60)
ACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAAT > SRR4302533.45490/1‑94 (MQ=60)
ACGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAAT < SRR4302533.3969860/94‑1 (MQ=60)
CGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC > SRR4302533.3069405/1‑94 (MQ=60)
CGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC < SRR4302533.5208813/94‑1 (MQ=60)
CGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC < SRR4302533.1246427/94‑1 (MQ=60)
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CCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATC > NC_000913/3637851‑3638037
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
