Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,665,586 T→C A411A (GCA→GCG)  yhjA ← putative cytochrome C peroxidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,665,5860TC100.0% 1411.9 / NA 440A411A (GCA→GCG) yhjAputative cytochrome C peroxidase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (268/172);  total (268/172)

Only 100 of 456 total aligned reads displayed.

CTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGC  >  NC_000913/3665496‑3665675
                                                                                          |                                                                                         
ctcctGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGgcgc                                                                                         >  2:3519521/1‑93 (MQ=255)
  cctGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCg                                                                                       >  2:1596001/1‑93 (MQ=255)
  cctGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCg                                                                                       >  2:8711809/1‑93 (MQ=255)
    tGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGtt                                                                                     >  2:2191195/1‑93 (MQ=255)
      cGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTaa                                                                                   >  1:1707207/1‑93 (MQ=255)
       ggCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTaaa                                                                                  >  2:6325475/1‑93 (MQ=255)
        gCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAg                                                                                 >  2:1959404/1‑93 (MQ=255)
            ctctTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAAc                                                                             >  2:8389968/1‑93 (MQ=255)
            ctctTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAAc                                                                             >  2:9417835/1‑93 (MQ=255)
              ctTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGt                                                                           >  2:894033/1‑93 (MQ=255)
               tttGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGACGTACGGCGCCGTTAAAGCAACGtt                                                                          >  1:333244/1‑93 (MQ=255)
               tttGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGtt                                                                          <  1:7803952/93‑1 (MQ=255)
               tttGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGtt                                                                          >  1:4514721/1‑93 (MQ=255)
                  gCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACg                                                                       >  2:2447539/1‑93 (MQ=255)
                   ccTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGt                                                                      <  1:9624687/93‑1 (MQ=255)
                    cTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTa                                                                     >  2:6467773/1‑93 (MQ=255)
                     tACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTaa                                                                    >  1:2999040/1‑93 (MQ=255)
                       ccTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAAc                                                                  <  2:4228573/93‑1 (MQ=255)
                         tGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCg                                                                >  2:4462138/1‑93 (MQ=255)
                            tAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGt                                                             <  2:6625515/93‑1 (MQ=255)
                            tAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGt                                                             >  1:7031658/1‑93 (MQ=255)
                             aGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTa                                                            <  2:5137554/93‑1 (MQ=255)
                             aGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTa                                                            <  2:5511489/93‑1 (MQ=255)
                              gcgcAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTAc                                                           >  1:8945713/1‑93 (MQ=255)
                               cgcAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACt                                                          >  1:9277049/1‑93 (MQ=255)
                               cgcAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACt                                                          >  2:9091933/1‑93 (MQ=255)
                                 cagcaTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACttt                                                        >  1:3227120/1‑93 (MQ=255)
                                  agcaTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTc                                                       <  1:7487950/93‑1 (MQ=255)
                                    caTCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTg                                                     >  1:9555846/1‑93 (MQ=255)
                                      tCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAc                                                   <  1:1347816/93‑1 (MQ=255)
                                      tCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAc                                                   >  2:1167040/1‑93 (MQ=255)
                                      tCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAc                                                   >  2:6112028/1‑93 (MQ=255)
                                      tCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAc                                                   >  2:624487/1‑93 (MQ=255)
                                      tCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAc                                                   >  1:368485/1‑93 (MQ=255)
                                         gTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCa                                                <  1:3273796/93‑1 (MQ=255)
                                         gTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCa                                                >  2:919577/1‑93 (MQ=255)
                                         gTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCa                                                <  1:7628517/93‑1 (MQ=255)
                                          tttCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCat                                               >  2:1348880/1‑92 (MQ=255)
                                          tttCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCaa                                               >  1:3530250/1‑93 (MQ=255)
                                            tCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAAtt                                             >  2:7486453/1‑93 (MQ=255)
                                              cccGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTa                                           <  2:9519074/92‑1 (MQ=255)
                                              aCCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTa                                           <  2:9811331/93‑1 (MQ=255)
                                              aCCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTa                                           >  1:2145062/1‑93 (MQ=255)
                                               ccGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTAt                                          <  1:8666779/93‑1 (MQ=255)
                                               ccGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTAt                                          >  1:5570907/1‑93 (MQ=255)
                                               ccGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTAt                                          >  1:1864140/1‑93 (MQ=255)
                                               ccGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTAt                                          >  2:1718477/1‑93 (MQ=255)
                                                cGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATc                                         <  1:8471306/93‑1 (MQ=255)
                                                   cccGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACg                                      >  2:7676635/1‑93 (MQ=255)
                                                   cccGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACg                                      <  1:6149697/93‑1 (MQ=255)
                                                   cccGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACg                                      >  2:3044454/1‑93 (MQ=255)
                                                    ccGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGc                                     <  1:1141836/93‑1 (MQ=255)
                                                      gTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctc                                   <  1:8153843/93‑1 (MQ=255)
                                                      gTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctc                                   >  1:5668692/1‑93 (MQ=255)
                                                      gTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctc                                   >  1:44351/1‑93 (MQ=255)
                                                       tCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGctct                                  >  2:8149433/1‑93 (MQ=255)
                                                        ccAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCtctt                                 >  2:258121/1‑93 (MQ=255)
                                                         cAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCtcttc                                <  1:8758696/93‑1 (MQ=255)
                                                         cAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCtcttc                                <  1:6829327/93‑1 (MQ=255)
                                                          aGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCtcttct                               <  1:6677471/93‑1 (MQ=255)
                                                           gCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTcttctt                              >  1:8043745/1‑93 (MQ=255)
                                                           gCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTcttctt                              >  1:6526685/1‑93 (MQ=255)
                                                           gCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTcttctt                              >  1:2503062/1‑93 (MQ=255)
                                                             gTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTa                            <  2:6022752/93‑1 (MQ=255)
                                                              tCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAg                           >  2:6898196/1‑93 (MQ=255)
                                                              tCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAg                           <  1:126303/93‑1 (MQ=255)
                                                               cGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGt                          <  1:6041719/93‑1 (MQ=255)
                                                               cGGCACGTCACCGCGATGGAAGGACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGt                          <  2:4134302/93‑1 (MQ=255)
                                                                 gCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTca                        <  2:4002287/93‑1 (MQ=255)
                                                                 gCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTca                        <  1:4340891/93‑1 (MQ=255)
                                                                 gCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTca                        >  2:5635423/1‑93 (MQ=255)
                                                                   aCGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTcaca                      >  1:3754497/1‑93 (MQ=255)
                                                                   aCGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTcaca                      >  2:7265673/1‑93 (MQ=255)
                                                                    cGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAt                     <  2:3601685/93‑1 (MQ=255)
                                                                    cGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAt                     >  2:70387/1‑93 (MQ=255)
                                                                    cGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAt                     <  1:6961545/93‑1 (MQ=255)
                                                                     gTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAtt                    >  2:1109069/1‑93 (MQ=255)
                                                                      tCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAtta                   >  1:2408277/1‑92 (MQ=255)
                                                                      tCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTc                   >  1:568627/1‑93 (MQ=255)
                                                                       cACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCa                  >  1:3487616/1‑93 (MQ=255)
                                                                        aCCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAt                 >  2:4851245/1‑93 (MQ=255)
                                                                         ccGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATa                <  2:5329041/93‑1 (MQ=255)
                                                                         ccGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATa                >  1:4908817/1‑93 (MQ=255)
                                                                         ccGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATa                <  1:4015309/93‑1 (MQ=255)
                                                                            cgATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGa             >  1:5134467/1‑93 (MQ=255)
                                                                              aTGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAca           >  1:9888145/1‑92 (MQ=255)
                                                                              aTGGAAGTACGGCGCCGTTAAAGCAACGTTACGGAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAcc           <  1:9674605/93‑1 (MQ=255)
                                                                               tGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCa          >  2:3671351/1‑93 (MQ=255)
                                                                                ggAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCaa         >  2:1136393/1‑93 (MQ=255)
                                                                                ggAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCaa         >  1:4999985/1‑93 (MQ=255)
                                                                                 gAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAat        <  1:542208/93‑1 (MQ=255)
                                                                                 gAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAat        >  2:7978679/1‑93 (MQ=255)
                                                                                 gAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAat        <  2:8310965/93‑1 (MQ=255)
                                                                                  aaGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAata       <  1:2367110/93‑1 (MQ=255)
                                                                                  aaGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAata       <  2:3412500/93‑1 (MQ=255)
                                                                                  aaGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAata       <  1:939147/93‑1 (MQ=255)
                                                                                   aGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAatat      >  2:4557648/1‑93 (MQ=255)
                                                                                     tACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATcc    <  1:2694135/93‑1 (MQ=255)
                                                                                      aCGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATccg   <  2:7861951/93‑1 (MQ=255)
                                                                                       cGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATccgc  >  2:2811959/1‑93 (MQ=255)
                                                                                          |                                                                                         
CTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGC  >  NC_000913/3665496‑3665675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 248 total aligned reads displayed.
ATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCC  >  NC_000913/3665493‑3665679
                                                                                             |                                                                                             
ATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGC                                                                                               <  SRR4302540.10116941/94‑1 (MQ=60)
ATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGC                                                                                               >  SRR4302540.1020312/1‑94 (MQ=60)
ATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGC                                                                                               >  SRR4302540.5129033/1‑94 (MQ=60)
ATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGCCACGTCACCGCGATGGAAGTACGGC                                                                                               >  SRR4302540.2985081/1‑94 (MQ=60)
 TCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCG                                                                                              >  SRR4302540.1526171/1‑94 (MQ=60)
  CCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGC                                                                                             >  SRR4302540.9731612/1‑94 (MQ=60)
   CTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCC                                                                                            <  SRR4302540.4984265/94‑1 (MQ=60)
     CCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGT                                                                                          >  SRR4302540.8183873/1‑94 (MQ=60)
       TGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTA                                                                                        <  SRR4302540.7461707/94‑1 (MQ=60)
       TGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTA                                                                                        >  SRR4302540.8031061/1‑94 (MQ=60)
        GCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAA                                                                                       <  SRR4302540.1261277/94‑1 (MQ=60)
        GCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAA                                                                                       >  SRR4302540.1725658/1‑94 (MQ=60)
         CGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCGCCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAA                                                                                      >  SRR4302540.7865959/1‑94 (MQ=60)
         CGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAA                                                                                      >  SRR4302540.4016043/1‑94 (MQ=60)
          GGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAG                                                                                     >  SRR4302540.5217566/1‑94 (MQ=60)
          GGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAG                                                                                     <  SRR4302540.2290364/94‑1 (MQ=60)
          GGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAG                                                                                     <  SRR4302540.2184430/94‑1 (MQ=60)
          GGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAG                                                                                     >  SRR4302540.5020452/1‑94 (MQ=60)
            CAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCA                                                                                   >  SRR4302540.5720208/1‑94 (MQ=60)
            CAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCA                                                                                   >  SRR4302540.4439868/1‑94 (MQ=60)
             AGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAA                                                                                  >  SRR4302540.8841589/1‑94 (MQ=60)
               CTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGCAGTACGGCGCCGTTAAAGCAACG                                                                                >  SRR4302540.3545305/1‑94 (MQ=60)
               CTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACG                                                                                >  SRR4302540.1830798/1‑94 (MQ=60)
               CTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACG                                                                                <  SRR4302540.9625996/94‑1 (MQ=60)
               CTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACG                                                                                >  SRR4302540.4522305/1‑94 (MQ=60)
               CTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACG                                                                                >  SRR4302540.2845169/1‑94 (MQ=60)
                TCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGT                                                                               >  SRR4302540.119858/1‑94 (MQ=60)
                TCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGT                                                                               >  SRR4302540.70/1‑94 (MQ=60)
                 CTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGACGTACGGCGCCGTTAAAGCAACGTT                                                                              >  SRR4302540.336596/1‑94 (MQ=60)
                 CTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTT                                                                              >  SRR4302540.4563631/1‑94 (MQ=60)
                 CTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTT                                                                              >  SRR4302540.336595/1‑94 (MQ=60)
                   TTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTAC                                                                            <  SRR4302540.6626163/94‑1 (MQ=60)
                    TGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACG                                                                           <  SRR4302540.2844240/94‑1 (MQ=60)
                     GCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGT                                                                          >  SRR4302540.4694763/1‑94 (MQ=60)
                     GCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGGACGGCGCCGTTAAAACAACGTTACGA                                                                          >  SRR4302540.5164012/1‑94 (MQ=60)
                      CCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTA                                                                         <  SRR4302540.9738122/94‑1 (MQ=60)
                      CCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTA                                                                         >  SRR4302540.9750582/1‑94 (MQ=60)
                       CTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAA                                                                        >  SRR4302540.5085152/1‑94 (MQ=60)
                         ACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAAC                                                                      >  SRR4302540.8722074/1‑94 (MQ=60)
                         ACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAAAGTTACGTAAAC                                                                      <  SRR4302540.9209217/94‑1 (MQ=60)
                          CCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACC                                                                     <  SRR4302540.6770005/94‑1 (MQ=60)
                           CTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCG                                                                    >  SRR4302540.4448023/1‑94 (MQ=60)
                           CTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCG                                                                    >  SRR4302540.1176259/1‑94 (MQ=60)
                            TGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGG                                                                   >  SRR4302540.3065544/1‑94 (MQ=60)
                            TGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGAACGTCACCGCGATGGAAGAAACGCGCCGTTAAAGCAACGTTACGTAAACCGG                                                                   >  SRR4302540.3643276/1‑94 (MQ=60)
                             GATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGG                                                                  <  SRR4302540.6177833/94‑1 (MQ=60)
                              ATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGT                                                                 <  SRR4302540.3747656/94‑1 (MQ=60)
                              ATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGT                                                                 >  SRR4302540.632574/1‑94 (MQ=60)
                               TAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTA                                                                <  SRR4302540.4085677/94‑1 (MQ=60)
                               TAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTA                                                                <  SRR4302540.3295462/94‑1 (MQ=60)
                               TAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTA                                                                <  SRR4302540.5067058/94‑1 (MQ=60)
                               TAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTA                                                                <  SRR4302540.3363987/94‑1 (MQ=60)
                                AGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTAC                                                               <  SRR4302540.21660/94‑1 (MQ=60)
                                AGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTAC                                                               >  SRR4302540.9050935/1‑94 (MQ=60)
                                AGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTAC                                                               >  SRR4302540.5713257/1‑94 (MQ=60)
                                AGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTAC                                                               >  SRR4302540.2423434/1‑94 (MQ=60)
                                 aaccgctcttccgatctagcgcttGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACT                                                              <  SRR4302540.3378301/70‑1 (MQ=60)
                                 GCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACT                                                              >  SRR4302540.9387955/1‑94 (MQ=60)
                                 GCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACT                                                              <  SRR4302540.5344112/94‑1 (MQ=60)
                                  CGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTT                                                             >  SRR4302540.2053652/1‑94 (MQ=60)
                                   GCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTT                                                            >  SRR4302540.305612/1‑94 (MQ=60)
                                    CAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTC                                                           <  SRR4302540.3345902/94‑1 (MQ=60)
                                    CAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTC                                                           >  SRR4302540.7291721/1‑94 (MQ=60)
                                    CAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTC                                                           >  SRR4302540.1736720/1‑94 (MQ=60)
                                     AGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCT                                                          <  SRR4302540.1419806/94‑1 (MQ=60)
                                      GCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTG                                                         >  SRR4302540.9668852/1‑94 (MQ=60)
                                      GCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTG                                                         >  SRR4302540.9668851/1‑94 (MQ=60)
                                      GCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTG                                                         >  SRR4302540.8006140/1‑94 (MQ=60)
                                      GCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTG                                                         <  SRR4302540.8546768/94‑1 (MQ=60)
                                       CATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGA                                                        >  SRR4302540.6961915/1‑94 (MQ=60)
                                       CATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGA                                                        >  SRR4302540.8180439/1‑94 (MQ=60)
                                        ATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAC                                                       >  SRR4302540.9000378/1‑94 (MQ=60)
                                        ATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAC                                                       >  SRR4302540.8773858/1‑94 (MQ=60)
                                        ATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAC                                                       >  SRR4302540.372282/1‑94 (MQ=60)
                                        ATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGAC                                                       >  SRR4302540.2264958/1‑94 (MQ=60)
                                         TCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACG                                                      <  SRR4302540.2670266/94‑1 (MQ=60)
                                         TCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACG                                                      <  SRR4302540.1361970/94‑1 (MQ=60)
                                          CAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGC                                                     >  SRR4302540.3163770/1‑94 (MQ=60)
                                            GTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAA                                                   <  SRR4302540.7714310/94‑1 (MQ=60)
                                            GTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAA                                                   <  SRR4302540.3309534/94‑1 (MQ=60)
                                            GTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAA                                                   <  SRR4302540.7714309/94‑1 (MQ=60)
                                            GTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAA                                                   >  SRR4302540.3568767/1‑94 (MQ=60)
                                            GTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAA                                                   >  SRR4302540.3778439/1‑94 (MQ=60)
                                              TTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATT                                                 <  SRR4302540.3212492/94‑1 (MQ=60)
                                               TCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTT                                                <  SRR4302540.950350/94‑1 (MQ=60)
                                                CACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTA                                               <  SRR4302540.2663266/94‑1 (MQ=60)
                                                 ACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTAT                                              >  SRR4302540.1884576/1‑94 (MQ=60)
                                                 ACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTAT                                              <  SRR4302540.9484831/94‑1 (MQ=60)
                                                 ACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTAT                                              >  SRR4302540.5632245/1‑94 (MQ=60)
                                                 ACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTAT                                              <  SRR4302540.4463567/94‑1 (MQ=60)
                                                 ACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTAT                                              >  SRR4302540.244692/1‑94 (MQ=60)
                                                   CGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCA                                            <  SRR4302540.8569689/94‑1 (MQ=60)
                                                   CGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCA                                            <  SRR4302540.10011632/94‑1 (MQ=60)
                                                    GCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC                                           <  SRR4302540.7658682/94‑1 (MQ=60)
                                                    GCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC                                           <  SRR4302540.5745376/94‑1 (MQ=60)
                                                    GCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC                                           <  SRR4302540.1543728/94‑1 (MQ=60)
                                                    GCCCAGGCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCAC                                           <  SRR4302540.8974423/94‑1 (MQ=60)
                                                    CCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTCCGGCGCCGTTAAAGCAACGTTACGTAAACCGGGGACTTTCTGACGCAATTTATCAC                                           <  SRR4302540.5562995/94‑1 (MQ=60)
                                                      CCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGC                                         <  SRR4302540.6218191/94‑1 (MQ=60)
                                                      CCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGC                                         >  SRR4302540.4077295/1‑94 (MQ=60)
                                                       CCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCT                                        <  SRR4302540.6637662/94‑1 (MQ=60)
                                                       CCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCT                                        <  SRR4302540.1153771/94‑1 (MQ=60)
                                                        CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTC                                       >  SRR4302540.5731117/1‑94 (MQ=60)
                                                        CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTC                                       >  SRR4302540.44810/1‑94 (MQ=60)
                                                        CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTC                                       >  SRR4302540.7765520/1‑94 (MQ=60)
                                                        CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTC                                       >  SRR4302540.2528021/1‑94 (MQ=60)
                                                        CGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTC                                       >  SRR4302540.3307101/1‑94 (MQ=60)
                                                         GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                      >  SRR4302540.7101389/1‑94 (MQ=60)
                                                         GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                      >  SRR4302540.3783845/1‑94 (MQ=60)
                                                         GTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCT                                      <  SRR4302540.8248512/94‑1 (MQ=60)
                                                            CAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCT                                   <  SRR4302540.6904942/94‑1 (MQ=60)
                                                            CAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCT                                   <  SRR4302540.6904944/94‑1 (MQ=60)
                                                            CAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCT                                   >  SRR4302540.5288714/1‑94 (MQ=60)
                                                            CAGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCT                                   <  SRR4302540.7401693/94‑1 (MQ=60)
                                                             AGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTT                                  >  SRR4302540.8137200/1‑94 (MQ=60)
                                                             AGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTT                                  >  SRR4302540.2530074/1‑94 (MQ=60)
                                                             AGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTT                                  <  SRR4302540.6621514/94‑1 (MQ=60)
                                                             AGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTT                                  >  SRR4302540.6599168/1‑94 (MQ=60)
                                                             AGCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTT                                  >  SRR4302540.6019516/1‑94 (MQ=60)
                                                              GCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAACGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTT                                 >  SRR4302540.9941707/1‑94 (MQ=60)
                                                              GCGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTT                                 >  SRR4302540.6764267/1‑94 (MQ=60)
                                                               CGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTA                                <  SRR4302540.6030404/94‑1 (MQ=60)
                                                               CGTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTA                                >  SRR4302540.9398602/1‑94 (MQ=60)
                                                                GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                               >  SRR4302540.8430554/1‑94 (MQ=60)
                                                                GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                               >  SRR4302540.1324571/1‑94 (MQ=60)
                                                                GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                               >  SRR4302540.7816501/1‑94 (MQ=60)
                                                                GTCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAG                               >  SRR4302540.1324572/1‑94 (MQ=60)
                                                                 TCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGT                              <  SRR4302540.7094587/94‑1 (MQ=60)
                                                                 TCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGT                              <  SRR4302540.7094586/94‑1 (MQ=60)
                                                                 TCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGT                              <  SRR4302540.127636/94‑1 (MQ=60)
                                                                 TCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGT                              <  SRR4302540.6870711/94‑1 (MQ=60)
                                                                 TCGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGT                              <  SRR4302540.5763146/94‑1 (MQ=60)
                                                                  CGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTC                             <  SRR4302540.6108820/94‑1 (MQ=60)
                                                                  CGGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTC                             >  SRR4302540.3497365/1‑94 (MQ=60)
                                                                   GGCACGTCCCCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCA                            <  SRR4302540.2504672/94‑1 (MQ=60)
                                                                   GGCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCA                            >  SRR4302540.901868/1‑94 (MQ=60)
                                                                    GCACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCAC                           <  SRR4302540.4388149/94‑1 (MQ=60)
                                                                     CACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACA                          >  SRR4302540.3795454/1‑94 (MQ=60)
                                                                      ACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAT                         >  SRR4302540.7896715/1‑94 (MQ=60)
                                                                      ACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAT                         >  SRR4302540.3897488/1‑94 (MQ=60)
                                                                      ACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAT                         >  SRR4302540.6198853/1‑94 (MQ=60)
                                                                      ACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACAT                         >  SRR4302540.571329/1‑94 (MQ=60)
                                                                      ACGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCAGACGCAATTTATCACGCTCTTCTTTAGTCACAT                         >  SRR4302540.9804349/1‑94 (MQ=60)
                                                                       CGTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATT                        <  SRR4302540.7038975/94‑1 (MQ=60)
                                                                        GTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTC                       >  SRR4302540.8766038/1‑94 (MQ=60)
                                                                        GTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTC                       >  SRR4302540.574804/1‑94 (MQ=60)
                                                                        GTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTC                       >  SRR4302540.8510564/1‑94 (MQ=60)
                                                                        GTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTC                       >  SRR4302540.574802/1‑94 (MQ=60)
                                                                        GTCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTA                       >  SRR4302540.2434242/1‑94 (MQ=60)
                                                                         TCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCA                      >  SRR4302540.3525594/1‑94 (MQ=60)
                                                                         TCACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCA                      >  SRR4302540.3525596/1‑94 (MQ=60)
                                                                          CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT                     <  SRR4302540.4120008/94‑1 (MQ=60)
                                                                          CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT                     <  SRR4302540.5526276/94‑1 (MQ=60)
                                                                          CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT                     >  SRR4302540.4541546/1‑94 (MQ=60)
                                                                          CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT                     <  SRR4302540.2411641/94‑1 (MQ=60)
                                                                          CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT                     <  SRR4302540.9074872/94‑1 (MQ=60)
                                                                          CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT                     <  SRR4302540.6570992/94‑1 (MQ=60)
                                                                          CACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCAT                     <  SRR4302540.7170305/94‑1 (MQ=60)
                                                                           ACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATA                    <  SRR4302540.2888959/94‑1 (MQ=60)
                                                                           ACCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATA                    >  SRR4302540.4961665/1‑94 (MQ=60)
                                                                            CCGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATAC                   <  SRR4302540.4058560/94‑1 (MQ=60)
                                                                             CGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACG                  <  SRR4302540.9763238/94‑1 (MQ=60)
                                                                             CGCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACG                  <  SRR4302540.6308391/94‑1 (MQ=60)
                                                                              GCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGA                 <  SRR4302540.4839709/94‑1 (MQ=60)
                                                                              GCGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGA                 >  SRR4302540.5190072/1‑94 (MQ=60)
                                                                               CGATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGAC                <  SRR4302540.2721832/94‑1 (MQ=60)
                                                                                GATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACC               >  SRR4302540.974062/1‑94 (MQ=60)
                                                                                GATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACC               >  SRR4302540.10003602/1‑94 (MQ=60)
                                                                                GATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACA               >  SRR4302540.10003601/1‑94 (MQ=60)
                                                                                 ATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCA              >  SRR4302540.9531866/1‑94 (MQ=60)
                                                                                 ATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCA              >  SRR4302540.1277277/1‑94 (MQ=60)
                                                                                 ATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCA              >  SRR4302540.4782920/1‑94 (MQ=60)
                                                                                 ATGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATAAGACCA              >  SRR4302540.3657412/1‑94 (MQ=60)
                                                                                 ATGGAAGTACGGCGCCGTTAAAGCAACGTTACGGAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCA              <  SRR4302540.9788439/94‑1 (MQ=60)
                                                                                  TGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAA             >  SRR4302540.3560313/1‑94 (MQ=60)
                                                                                  TGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAA             >  SRR4302540.5434245/1‑94 (MQ=60)
                                                                                  TGGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAA             >  SRR4302540.5054124/1‑94 (MQ=60)
                                                                                   GGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAAT            >  SRR4302540.7687857/1‑94 (MQ=60)
                                                                                   GGAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAAT            <  SRR4302540.9140983/94‑1 (MQ=60)
                                                                                    GAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATA           <  SRR4302540.548073/94‑1 (MQ=60)
                                                                                    GAAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATA           >  SRR4302540.2544347/1‑94 (MQ=60)
                                                                                     AAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCATGCTCTTCTTTAGTCACATTCATACGACCAATAT          >  SRR4302540.9815027/1‑94 (MQ=60)
                                                                                     AAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATAT          >  SRR4302540.555734/1‑94 (MQ=60)
                                                                                     AAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATAT          <  SRR4302540.1946901/94‑1 (MQ=60)
                                                                                     AAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATAT          <  SRR4302540.948972/94‑1 (MQ=60)
                                                                                     AAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATAT          <  SRR4302540.2392604/94‑1 (MQ=60)
                                                                                     AAGTACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATAT          <  SRR4302540.3279709/94‑1 (MQ=60)
                                                                                       GTACGGCGCCATTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCC        >  SRR4302540.3969531/1‑94 (MQ=60)
                                                                                        TACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCG       <  SRR4302540.8633457/94‑1 (MQ=60)
                                                                                        TACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCG       <  SRR4302540.8807006/94‑1 (MQ=60)
                                                                                        TACGGCGCCGTTAAAGCAACGTTACGGAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCG       <  SRR4302540.8807005/94‑1 (MQ=60)
                                                                                         ACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGC      >  SRR4302540.1820249/1‑94 (MQ=60)
                                                                                         ACGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGC      >  SRR4302540.8163131/1‑94 (MQ=60)
                                                                                          CGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCC     <  SRR4302540.2199351/94‑1 (MQ=60)
                                                                                          CGGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCC     >  SRR4302540.2711840/1‑94 (MQ=60)
                                                                                           GGCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCG    <  SRR4302540.873048/94‑1 (MQ=60)
                                                                                            GCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGC   <  SRR4302540.5404334/94‑1 (MQ=60)
                                                                                            GCGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGC   <  SRR4302540.6779389/94‑1 (MQ=60)
                                                                                             CGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCCCATTCATACGACAAATATCCCCCGCC  >  SRR4302540.7820448/1‑94 (MQ=60)
                                                                                             CGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCC  >  SRR4302540.7820447/1‑94 (MQ=60)
                                                                                             |                                                                                             
ATCCTCCTGCGGCAGCTCTTTGCCTACCTGATAGCGCAGCATCAGTTTCACCGCCCCGTCCAGCGTCGGCACGTCACCGCGATGGAAGTACGGTGCCGTTAAAGCAACGTTACGTAAACCGGGTACTTTCTGACGCAATTTATCACGCTCTTCTTTAGTCACATTCATACGACCAATATCCGCCGCC  >  NC_000913/3665493‑3665679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑