Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,666,629 T→C T64A (ACG→GCG)  yhjA ← putative cytochrome C peroxidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,666,6290TC99.7% 1987.6 / ‑4.6 619T64A (ACG→GCG) yhjAputative cytochrome C peroxidase
Reads supporting (aligned to +/- strand):  ref base T (2/0);  new base C (311/306);  total (313/306)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.27e-01

Only 100 of 651 total aligned reads displayed.

TAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAC  >  NC_000913/3666539‑3666718
                                                                                          |                                                                                         
tAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCgcgt                                                                                         >  1:903812/1‑93 (MQ=255)
 aaaaGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGcgtg                                                                                        >  2:1520702/1‑93 (MQ=255)
  aaaGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTgg                                                                                       >  1:1581184/1‑93 (MQ=255)
  aaaGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTgg                                                                                       <  1:6353442/93‑1 (MQ=255)
   aaGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGc                                                                                      >  1:5918917/1‑93 (MQ=255)
      aTTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAt                                                                                   >  1:9552851/1‑93 (MQ=255)
       tttATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATa                                                                                  <  1:5224360/93‑1 (MQ=255)
       tttATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATa                                                                                  >  2:2784616/1‑93 (MQ=255)
       tttATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATa                                                                                  <  2:1800244/93‑1 (MQ=255)
       tttATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATa                                                                                  <  1:6252432/93‑1 (MQ=255)
        gtataTCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCGGCCGAAGGCGCGTTGCAATAg                                                                                 >  2:6164516/2‑93 (MQ=255)
         tataTCCAAGCTTAATATCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGt                                                                                >  2:7657218/1‑93 (MQ=255)
          atatCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTc                                                                               >  1:5764768/1‑93 (MQ=255)
           tatCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCg                                                                              >  2:3619949/1‑93 (MQ=255)
           tatCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCg                                                                              >  2:2879639/1‑93 (MQ=255)
           tatCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCAAGGCGCGTGGCAATAGTCGc                                                                             <  2:1325879/93‑1 (MQ=255)
               cAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATc                                                                          >  2:6211105/1‑93 (MQ=255)
                 aGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCt                                                                        >  1:3932978/1‑93 (MQ=255)
                   cTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCttt                                                                      <  1:1184681/93‑1 (MQ=255)
                     tAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCttttt                                                                    >  2:5913074/1‑93 (MQ=255)
                     tAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCttttt                                                                    <  2:3102460/93‑1 (MQ=255)
                     tAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGCGGCGTGGCAATAGTCGCATCCttttt                                                                    >  2:706965/1‑93 (MQ=255)
                       aTGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTcg                                                                  >  1:7277360/1‑93 (MQ=255)
                        tGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTcgc                                                                 <  2:939858/93‑1 (MQ=255)
                          tCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCgg                                                               >  2:3530421/1‑93 (MQ=255)
                             tAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGGAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGgaga                                                            >  2:1226458/1‑93 (MQ=255)
                               aTCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGaaa                                                          <  1:5513716/93‑1 (MQ=255)
                               aTCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGaaa                                                          <  1:1049206/93‑1 (MQ=255)
                                tCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAg                                                         <  2:5202882/93‑1 (MQ=255)
                                tCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAg                                                         >  1:185377/1‑93 (MQ=255)
                                   aTCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCt                                                      >  2:7942688/1‑93 (MQ=255)
                                   aTCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCt                                                      >  2:8356041/1‑93 (MQ=255)
                                    tCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTa                                                     >  2:9202119/1‑93 (MQ=255)
                                    tCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTa                                                     >  1:2072871/1‑93 (MQ=255)
                                      aaCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaaa                                                   <  2:8758762/93‑1 (MQ=255)
                                       aCTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTaaaa                                                  >  2:5740086/1‑93 (MQ=255)
                                        cTGTTGCGCGCCAGGAATATAATAATAGGCGGGTAATGCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAc                                                 <  2:4497306/93‑1 (MQ=255)
                                          gTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCt                                               >  1:2714004/1‑93 (MQ=255)
                                          gTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCt                                               >  1:6466087/1‑93 (MQ=255)
                                          gTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCt                                               >  1:6954664/1‑93 (MQ=255)
                                           tttCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCtt                                              >  2:246100/1‑93 (MQ=255)
                                           tttCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCtt                                              <  1:9971192/93‑1 (MQ=255)
                                            ttCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCtta                                             <  1:7120798/93‑1 (MQ=255)
                                             tCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCttat                                            <  1:9713437/93‑1 (MQ=255)
                                             tCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCttat                                            >  2:9714171/1‑93 (MQ=255)
                                             tCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCttat                                            <  1:2305303/93‑1 (MQ=255)
                                              cgcgCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCATAAAACCttatt                                           >  1:8248812/1‑93 (MQ=255)
                                                 gcCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTattatt                                        <  1:4718718/93‑1 (MQ=255)
                                                 gcCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTattatt                                        <  2:3376726/93‑1 (MQ=255)
                                                 gcCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTattatt                                        <  2:5122040/93‑1 (MQ=255)
                                                 gcCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTattatt                                        >  2:6405431/1‑93 (MQ=255)
                                                  ccAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAttt                                       >  1:3489141/1‑93 (MQ=255)
                                                   cAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAtttt                                      >  1:5634622/1‑93 (MQ=255)
                                                   cAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAtttt                                      >  2:4351838/1‑93 (MQ=255)
                                                    aGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTc                                     >  1:7565689/1‑93 (MQ=255)
                                                    aGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTc                                     >  1:8569459/1‑93 (MQ=255)
                                                     ggAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCa                                    >  2:6634529/1‑93 (MQ=255)
                                                      gAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAc                                   <  1:7888117/93‑1 (MQ=255)
                                                      gAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAc                                   <  1:4090073/93‑1 (MQ=255)
                                                       aaTATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACt                                  >  2:959022/1‑93 (MQ=255)
                                                        atatAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACta                                 >  1:6006831/1‑92 (MQ=255)
                                                        atatAATAATAGGCGGGTAATTCTGCCGAAGGCGCGCGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTg                                 >  2:2666443/1‑93 (MQ=255)
                                                         tataATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGa                                >  2:679207/1‑93 (MQ=255)
                                                         tataATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGa                                >  1:4860135/1‑93 (MQ=255)
                                                         tataATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGa                                >  1:2517646/1‑93 (MQ=255)
                                                         tataATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGa                                <  1:2476588/93‑1 (MQ=255)
                                                          ataataataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTCATTATTTTCACTGAc                               >  2:8969760/1‑93 (MQ=255)
                                                           taataataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAca                              >  1:2820465/1‑93 (MQ=255)
                                                           taataataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAca                              <  2:204207/93‑1 (MQ=255)
                                                           taataataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAca                              >  2:9085583/1‑93 (MQ=255)
                                                           taataataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAca                              <  1:9362134/93‑1 (MQ=255)
                                                            aataataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAcag                             <  1:2939428/93‑1 (MQ=255)
                                                             ataataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAGAGCCTAAAACCTTATTATTTTCACTGAcagc                            <  2:1916389/93‑1 (MQ=255)
                                                              taataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAcagca                           >  2:3780121/1‑93 (MQ=255)
                                                              taataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAcagca                           >  1:3774518/1‑93 (MQ=255)
                                                                ataGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGa                         <  2:8544642/93‑1 (MQ=255)
                                                                 taGGCGGGCAATTCTGCCGAAGGAGCGAGGCAAAAGACGACAGCTTTTTCGCAGAGGAAGCCTACAACCATAGTAATATCACTGCCAACACAt                        >  2:7333079/1‑93 (MQ=255)
                                                                  aGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATg                       <  1:10008314/93‑1 (MQ=255)
                                                                  aGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATg                       >  1:8736639/1‑93 (MQ=255)
                                                                  aGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGACTAAAACCTTATTATTTGCACTGACGGCCGacg                       >  1:3029042/1‑91 (MQ=255)
                                                                   ggCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGc                      <  2:5638119/93‑1 (MQ=255)
                                                                    gCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGcc                     <  1:3614621/93‑1 (MQ=255)
                                                                       ggTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGa                  >  1:8091985/1‑93 (MQ=255)
                                                                        gTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGaa                 <  1:3215602/93‑1 (MQ=255)
                                                                         tAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAAc                >  1:1370220/1‑93 (MQ=255)
                                                                         tAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTAACTGACAGCAGATGCCTGAAc                >  1:6825823/1‑93 (MQ=255)
                                                                           aTTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAt              <  1:5051972/93‑1 (MQ=255)
                                                                            ttCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATc             >  2:4765079/1‑93 (MQ=255)
                                                                            ttCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATc             <  2:3937013/93‑1 (MQ=255)
                                                                             tCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTCTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCg            <  2:4611296/93‑1 (MQ=255)
                                                                              cTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCgg           <  2:1115804/93‑1 (MQ=255)
                                                                                gCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGACTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGcc         >  2:4916912/1‑93 (MQ=255)
                                                                                  cGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTg       <  2:7516715/93‑1 (MQ=255)
                                                                                   gAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGt      <  1:4396019/93‑1 (MQ=255)
                                                                                    aaGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGtt     >  1:9236576/1‑93 (MQ=255)
                                                                                    aaGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGtt     >  2:8260399/1‑93 (MQ=255)
                                                                                    aaGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGtt     >  2:8061877/1‑93 (MQ=255)
                                                                                     aGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGttt    <  2:7797246/93‑1 (MQ=255)
                                                                                      ggCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTa   <  1:3339388/93‑1 (MQ=255)
                                                                                       gcgcGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAc  <  2:4174306/93‑1 (MQ=255)
                                                                                          |                                                                                         
TAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAC  >  NC_000913/3666539‑3666718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 339 total aligned reads displayed.
GGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCG  >  NC_000913/3666536‑3666722
                                                                                             |                                                                                             
GGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGC                                                                                               >  SRR4302540.6295767/1‑94 (MQ=60)
GGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGC                                                                                               <  SRR4302540.4635228/94‑1 (MQ=60)
GGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGC                                                                                               >  SRR4302540.4368122/1‑94 (MQ=60)
 GTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCG                                                                                              >  SRR4302540.9014731/1‑94 (MQ=60)
 GTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCG                                                                                              <  SRR4302540.8311569/94‑1 (MQ=60)
 GTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCG                                                                                              >  SRR4302540.1190544/1‑94 (MQ=60)
  TTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGT                                                                                             >  SRR4302540.1955913/1‑94 (MQ=60)
   TAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTG                                                                                            >  SRR4302540.7053865/1‑94 (MQ=60)
   TAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTG                                                                                            >  SRR4302540.4221646/1‑94 (MQ=60)
    AAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGG                                                                                           >  SRR4302540.1259507/1‑94 (MQ=60)
    AAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGG                                                                                           <  SRR4302540.158183/94‑1 (MQ=60)
     AAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGC                                                                                          <  SRR4302540.6424197/94‑1 (MQ=60)
     AAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGC                                                                                          <  SRR4302540.6424198/94‑1 (MQ=60)
      AAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCA                                                                                         >  SRR4302540.1144778/1‑94 (MQ=60)
      AAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCA                                                                                         >  SRR4302540.8143820/1‑94 (MQ=60)
       AGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAA                                                                                        <  SRR4302540.3323671/94‑1 (MQ=60)
        GATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAT                                                                                       >  SRR4302540.9665842/1‑94 (MQ=60)
        GATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAT                                                                                       >  SRR4302540.8924322/1‑94 (MQ=60)
        GATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAAT                                                                                       <  SRR4302540.568602/94‑1 (MQ=60)
         ATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATA                                                                                      >  SRR4302540.7234214/1‑94 (MQ=60)
         ATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATA                                                                                      >  SRR4302540.5561956/1‑94 (MQ=60)
         ATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATA                                                                                      <  SRR4302540.4555829/94‑1 (MQ=60)
          TTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGTCGGTTAATTCTGCCGAAGGCGCGTGGCAATGG                                                                                     >  SRR4302540.6477015/1‑94 (MQ=60)
          TTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAG                                                                                     <  SRR4302540.5281324/94‑1 (MQ=60)
          TTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAG                                                                                     <  SRR4302540.7110126/94‑1 (MQ=60)
          TTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAG                                                                                     >  SRR4302540.2521776/1‑94 (MQ=60)
          TTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAG                                                                                     <  SRR4302540.6322001/94‑1 (MQ=60)
           TTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGT                                                                                    >  SRR4302540.6634730/1‑94 (MQ=60)
            TATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTC                                                                                   >  SRR4302540.5828419/1‑94 (MQ=60)
            TATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTC                                                                                   <  SRR4302540.7066890/94‑1 (MQ=60)
             ATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCG                                                                                  >  SRR4302540.6847293/1‑94 (MQ=60)
              TATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGC                                                                                 >  SRR4302540.7446214/1‑94 (MQ=60)
              TATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGC                                                                                 >  SRR4302540.9938351/1‑94 (MQ=60)
                TCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCAT                                                                               <  SRR4302540.7350098/94‑1 (MQ=60)
                  CAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCC                                                                             >  SRR4302540.10073270/1‑94 (MQ=60)
                   AAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCCATAGTCGCATCCT                                                                            >  SRR4302540.3178794/1‑94 (MQ=60)
                   AAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCT                                                                            >  SRR4302540.691106/1‑94 (MQ=60)
                   AAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCT                                                                            >  SRR4302540.3975492/1‑94 (MQ=60)
                     GCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTT                                                                          <  SRR4302540.1413450/94‑1 (MQ=60)
                      CTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTT                                                                         >  SRR4302540.5054144/1‑94 (MQ=60)
                      CTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTT                                                                         >  SRR4302540.4954241/1‑94 (MQ=60)
                       TTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTT                                                                        >  SRR4302540.8595550/1‑94 (MQ=60)
                       TTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTT                                                                        >  SRR4302540.7364905/1‑94 (MQ=60)
                        TAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATTTAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTC                                                                       >  SRR4302540.4095085/1‑94 (MQ=60)
                        TAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTC                                                                       >  SRR4302540.4611351/1‑94 (MQ=60)
                        TAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTC                                                                       <  SRR4302540.31568/94‑1 (MQ=60)
                          ATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGC                                                                     <  SRR4302540.4643648/94‑1 (MQ=60)
                           TGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCG                                                                    >  SRR4302540.937889/1‑94 (MQ=60)
                           TGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCG                                                                    <  SRR4302540.5667907/94‑1 (MQ=60)
                            GTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGG                                                                   <  SRR4302540.7724354/94‑1 (MQ=60)
                            GTCGTAATCCATCAACTATTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGG                                                                   <  SRR4302540.9095869/94‑1 (MQ=60)
                              TGTAATCCATCAACTGTTTCGCTCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAG                                                                 <  SRR4302540.6369116/94‑1 (MQ=60)
                              CGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAG                                                                 <  SRR4302540.3754987/94‑1 (MQ=60)
                               GTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGA                                                                >  SRR4302540.5245391/1‑94 (MQ=60)
                               GTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGA                                                                >  SRR4302540.2260484/1‑94 (MQ=60)
                                TAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAA                                                               <  SRR4302540.4379469/94‑1 (MQ=60)
                                TAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAA                                                               >  SRR4302540.9636225/1‑94 (MQ=60)
                                 AATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAA                                                              <  SRR4302540.1904547/94‑1 (MQ=60)
                                 AATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAA                                                              >  SRR4302540.3797122/1‑94 (MQ=60)
                                  ATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAG                                                             <  SRR4302540.5574444/94‑1 (MQ=60)
                                  ATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAG                                                             <  SRR4302540.7026771/94‑1 (MQ=60)
                                  ATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAG                                                             <  SRR4302540.4010136/94‑1 (MQ=60)
                                  ATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAG                                                             >  SRR4302540.187219/1‑94 (MQ=60)
                                    CCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCC                                                           <  SRR4302540.8082880/94‑1 (MQ=60)
                                     CATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCT                                                          >  SRR4302540.488699/1‑94 (MQ=60)
                                      ATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTA                                                         <  SRR4302540.477135/94‑1 (MQ=60)
                                      ATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTA                                                         >  SRR4302540.730611/1‑94 (MQ=60)
                                      ATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTA                                                         >  SRR4302540.8732669/1‑94 (MQ=60)
                                      ATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTA                                                         >  SRR4302540.2095160/1‑94 (MQ=60)
                                      ATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTA                                                         >  SRR4302540.2971854/1‑94 (MQ=60)
                                       TCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAA                                                        <  SRR4302540.6009624/94‑1 (MQ=60)
                                       TCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAA                                                        >  SRR4302540.9682177/1‑94 (MQ=60)
                                        TAACTGTTTCGCGCCAGGAATATAATAATAGGCGAGTAATTCTGCCGAAGGCGCGTGGCAATCGTCGCATCCTTTTTCGCGGAGAAAGCCTAAA                                                       <  SRR4302540.6488282/94‑1 (MQ=60)
                                        CAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTCAA                                                       >  SRR4302540.1117940/1‑94 (MQ=60)
                                        CAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAA                                                       >  SRR4302540.5356888/1‑94 (MQ=60)
                                        CAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAA                                                       >  SRR4302540.4082198/1‑94 (MQ=60)
                                        CAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAA                                                       <  SRR4302540.8284848/94‑1 (MQ=60)
                                         AACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAA                                                      >  SRR4302540.7682444/1‑94 (MQ=60)
                                          ACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAC                                                     <  SRR4302540.10143932/94‑1 (MQ=60)
                                          ACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAC                                                     >  SRR4302540.5783490/1‑94 (MQ=60)
                                          ACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAC                                                     <  SRR4302540.10143933/94‑1 (MQ=60)
                                          ACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAC                                                     <  SRR4302540.647911/94‑1 (MQ=60)
                                          ACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAC                                                     <  SRR4302540.3910939/94‑1 (MQ=60)
                                          ACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAAC                                                     >  SRR4302540.3524821/1‑94 (MQ=60)
                                           CTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACC                                                    >  SRR4302540.2734403/1‑94 (MQ=60)
                                            TGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCCATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCT                                                   >  SRR4302540.5606226/1‑94 (MQ=60)
                                            TGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCT                                                   >  SRR4302540.6538043/1‑94 (MQ=60)
                                            TGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCT                                                   <  SRR4302540.7662495/94‑1 (MQ=60)
                                            TGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCT                                                   <  SRR4302540.2164814/94‑1 (MQ=60)
                                            TGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCT                                                   <  SRR4302540.9421337/94‑1 (MQ=60)
                                            TGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCT                                                   >  SRR4302540.2743269/1‑94 (MQ=60)
                                              TTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTA                                                 <  SRR4302540.10087506/94‑1 (MQ=60)
                                              TTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTA                                                 <  SRR4302540.1048098/94‑1 (MQ=60)
                                               TTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTAT                                                <  SRR4302540.7200090/94‑1 (MQ=60)
                                                TCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATT                                               <  SRR4302540.2330109/94‑1 (MQ=60)
                                                TCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATT                                               <  SRR4302540.250852/94‑1 (MQ=60)
                                                TCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATT                                               <  SRR4302540.6009176/94‑1 (MQ=60)
                                                TCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCATAAAACCTTATT                                               >  SRR4302540.8344697/1‑94 (MQ=60)
                                                 CGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTA                                              <  SRR4302540.2247972/94‑1 (MQ=60)
                                                 CGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTA                                              <  SRR4302540.3288297/94‑1 (MQ=60)
                                                  GCTCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAT                                             <  SRR4302540.1738110/94‑1 (MQ=60)
                                                  GCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAT                                             >  SRR4302540.2810476/1‑94 (MQ=60)
                                                  GCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTAT                                             <  SRR4302540.9252692/94‑1 (MQ=60)
                                                    GCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTT                                           <  SRR4302540.1627866/94‑1 (MQ=60)
                                                    GCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTT                                           >  SRR4302540.1668320/1‑94 (MQ=60)
                                                    GCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTT                                           <  SRR4302540.2557215/94‑1 (MQ=60)
                                                    GCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTT                                           <  SRR4302540.574026/94‑1 (MQ=60)
                                                    GCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTT                                           >  SRR4302540.3527139/1‑94 (MQ=60)
                                                    GCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTT                                           <  SRR4302540.814016/94‑1 (MQ=60)
                                                     CCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTT                                          >  SRR4302540.9482019/1‑94 (MQ=60)
                                                     CCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTT                                          >  SRR4302540.5967961/1‑94 (MQ=60)
                                                     CCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTT                                          >  SRR4302540.5696639/1‑94 (MQ=60)
                                                      CAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTC                                         >  SRR4302540.6149716/1‑94 (MQ=60)
                                                      CAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTC                                         >  SRR4302540.3429995/1‑94 (MQ=60)
                                                      CAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTC                                         >  SRR4302540.8668996/1‑94 (MQ=60)
                                                        GGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAC                                       <  SRR4302540.640729/94‑1 (MQ=60)
                                                        GGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAC                                       <  SRR4302540.1204749/94‑1 (MQ=60)
                                                        GGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAC                                       <  SRR4302540.2048539/94‑1 (MQ=60)
                                                        GGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCAC                                       >  SRR4302540.9564787/1‑94 (MQ=60)
                                                         GAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACT                                      <  SRR4302540.8103029/94‑1 (MQ=60)
                                                         GAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACT                                      <  SRR4302540.7980191/94‑1 (MQ=60)
                                                         GAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACT                                      >  SRR4302540.1092332/1‑94 (MQ=60)
                                                          GATATAATAATAGGCGGGTAATTCTGCGGAAGGCGCGTGGCAATAGTCGCATCCTTGTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTG                                     <  SRR4302540.758734/94‑1 (MQ=60)
                                                          AATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTG                                     >  SRR4302540.3796873/1‑94 (MQ=60)
                                                          AATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTG                                     <  SRR4302540.4069767/94‑1 (MQ=60)
                                                           ATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGA                                    >  SRR4302540.2451692/1‑94 (MQ=60)
                                                           ATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGA                                    >  SRR4302540.4912252/1‑94 (MQ=60)
                                                           ATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGA                                    <  SRR4302540.9723619/94‑1 (MQ=60)
                                                           ATATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGA                                    >  SRR4302540.4718422/1‑94 (MQ=60)
                                                            TATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAC                                   <  SRR4302540.2503253/94‑1 (MQ=60)
                                                            TATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGAC                                   <  SRR4302540.3539438/94‑1 (MQ=60)
                                                             ATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACA                                  >  SRR4302540.5980507/1‑94 (MQ=60)
                                                             ATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACA                                  >  SRR4302540.36419/1‑94 (MQ=60)
                                                             ATAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACA                                  >  SRR4302540.2105900/1‑94 (MQ=60)
                                                              TAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAG                                 <  SRR4302540.4473923/94‑1 (MQ=60)
                                                              TAATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAG                                 <  SRR4302540.3017180/94‑1 (MQ=60)
                                                                ATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGTAAGCCTAAAACCTTATTATTTTCACTGACAGCA                               >  SRR4302540.9803438/1‑94 (MQ=60)
                                                                ATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCA                               >  SRR4302540.6108008/1‑94 (MQ=60)
                                                                ATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCA                               >  SRR4302540.8401222/1‑94 (MQ=60)
                                                                ATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCA                               <  SRR4302540.369560/94‑1 (MQ=60)
                                                                ATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCA                               >  SRR4302540.3815699/1‑94 (MQ=60)
                                                                ATAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCA                               >  SRR4302540.6946063/1‑94 (MQ=60)
                                                                 TAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAG                              <  SRR4302540.1514163/94‑1 (MQ=60)
                                                                 TAATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAG                              >  SRR4302540.4819580/1‑94 (MQ=60)
                                                                   ATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAT                            <  SRR4302540.9977646/94‑1 (MQ=60)
                                                                   ATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAT                            <  SRR4302540.2605483/94‑1 (MQ=60)
                                                                   ATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAT                            <  SRR4302540.3029396/94‑1 (MQ=60)
                                                                   ATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAT                            <  SRR4302540.5023199/94‑1 (MQ=60)
                                                                   ATAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGAG                            >  SRR4302540.3394068/1‑94 (MQ=60)
                                                                    TAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATG                           >  SRR4302540.8838076/1‑94 (MQ=60)
                                                                    TAGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGACTAAAACCTTATTATTTGCACTGACggccgacg                           >  SRR4302540.3062312/1‑86 (MQ=60)
                                                                     AGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGC                          <  SRR4302540.10124866/94‑1 (MQ=60)
                                                                     AGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGC                          <  SRR4302540.3946446/94‑1 (MQ=60)
                                                                     AGGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGC                          >  SRR4302540.6036349/1‑94 (MQ=60)
                                                                      GGCGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCC                         <  SRR4302540.2938728/94‑1 (MQ=60)
                                                                        CGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTG                       <  SRR4302540.9745814/94‑1 (MQ=60)
                                                                        CGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTG                       >  SRR4302540.6144201/1‑94 (MQ=60)
                                                                        CGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTG                       >  SRR4302540.244502/1‑94 (MQ=60)
                                                                        CGGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTG                       <  SRR4302540.7152532/94‑1 (MQ=60)
                                                                         GGGTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGA                      >  SRR4302540.8185914/1‑94 (MQ=60)
                                                                           GTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAca                    >  SRR4302540.1384739/1‑92 (MQ=60)
                                                                           GTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAAC                    >  SRR4302540.9334015/1‑94 (MQ=60)
                                                                           GTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAAC                    <  SRR4302540.3250519/94‑1 (MQ=60)
                                                                           GTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAAC                    <  SRR4302540.3373624/94‑1 (MQ=60)
                                                                           GTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAAC                    >  SRR4302540.2969267/1‑94 (MQ=60)
                                                                           GTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAAC                    <  SRR4302540.941757/94‑1 (MQ=60)
                                                                           GTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAAC                    >  SRR4302540.1384740/1‑94 (MQ=60)
                                                                           GTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAAC                    >  SRR4302540.5735990/1‑94 (MQ=60)
                                                                           GTAATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTAACTGACAGCAGATGCCTGAAC                    >  SRR4302540.6901394/1‑94 (MQ=60)
                                                                             AATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAT                  <  SRR4302540.5301686/94‑1 (MQ=60)
                                                                             AATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAT                  >  SRR4302540.10891/1‑94 (MQ=60)
                                                                             AATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACAT                  >  SRR4302540.3629481/1‑94 (MQ=60)
                                                                              ATTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATC                 <  SRR4302540.5106590/94‑1 (MQ=60)
                                                                               TTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCG                >  SRR4302540.1511308/1‑94 (MQ=60)
                                                                               TTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCG                <  SRR4302540.2931410/94‑1 (MQ=60)
                                                                               TTCTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGAAGATGCCTGAAAATCG                >  SRR4302540.925048/1‑94 (MQ=60)
                                                                                 CTGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGC              >  SRR4302540.5999977/1‑94 (MQ=60)
                                                                                  TGCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCC             <  SRR4302540.9408760/94‑1 (MQ=60)
                                                                                   GCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCTTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCT            >  SRR4302540.2555764/1‑94 (MQ=60)
                                                                                   GCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCT            <  SRR4302540.9126640/94‑1 (MQ=60)
                                                                                   GCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCT            <  SRR4302540.2541093/94‑1 (MQ=60)
                                                                                   GCCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCT            <  SRR4302540.5868733/94‑1 (MQ=60)
                                                                                    CCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTG           >  SRR4302540.2383248/1‑94 (MQ=60)
                                                                                    CCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTG           <  SRR4302540.2896927/94‑1 (MQ=60)
                                                                                    CCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTG           <  SRR4302540.284290/94‑1 (MQ=60)
                                                                                    CCGAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACATTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTG           >  SRR4302540.3483213/1‑94 (MQ=60)
                                                                                      GAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTT         >  SRR4302540.7502471/1‑94 (MQ=60)
                                                                                      GAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTT         <  SRR4302540.6586220/94‑1 (MQ=60)
                                                                                      GAAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTT         >  SRR4302540.8665554/1‑94 (MQ=60)
                                                                                       AAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTT        <  SRR4302540.2844944/94‑1 (MQ=60)
                                                                                       AAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTT        >  SRR4302540.4289501/1‑94 (MQ=60)
                                                                                       AAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTT        <  SRR4302540.8310419/94‑1 (MQ=60)
                                                                                       AAGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTT        <  SRR4302540.8751287/94‑1 (MQ=60)
                                                                                        AGGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTA       <  SRR4302540.9136021/94‑1 (MQ=60)
                                                                                         GGCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTAC      >  SRR4302540.3171787/1‑94 (MQ=60)
                                                                                          GCGCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACT     <  SRR4302540.5186601/94‑1 (MQ=60)
                                                                                            GCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGC   >  SRR4302540.732528/1‑94 (MQ=60)
                                                                                            GCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGC   <  SRR4302540.3924795/94‑1 (MQ=60)
                                                                                            GCGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGC   <  SRR4302540.8495779/94‑1 (MQ=60)
                                                                                            GCGTGGCAATAGTCGCATCCTGTTTCGCGGAGAAAGCCTAAACCCTTAGTATTTCCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGC   <  SRR4302540.5168293/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGGAGAAAGCCTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCG  >  NC_000913/3666536‑3666722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: