Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,678,204	G→A	P456L (CCG→CTG)	yhjJ ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,678,204	0	G	A	100.0%	1905.0 / NA	511	P456L (CCG→CTG)	yhjJ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (255/256); total (255/256)

Only 100 of 520 total aligned reads displayed.

TCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTA  >  NC_000913/3678114‑3678293

tCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGc                                                                                         >  2:90833/1‑93 (MQ=255)

  ctCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTc                                                                                       <  2:170018/92‑1 (MQ=255)

  aTCCGTGGCGACAGAGGTGGTCGTAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTc                                                                                       >  1:8716036/1‑93 (MQ=255)

  aTCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTc                                                                                       >  2:8918986/1‑93 (MQ=255)

   tCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCg                                                                                      >  1:7454712/1‑93 (MQ=255)

   tCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCg                                                                                      >  1:9325610/1‑93 (MQ=255)

    ccGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGACATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGc                                                                                     >  1:7772186/1‑93 (MQ=255)

     cGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGcc                                                                                    <  2:7975033/93‑1 (MQ=255)

      gTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCt                                                                                   >  1:7193801/1‑93 (MQ=255)

      gTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCt                                                                                   <  1:1952547/93‑1 (MQ=255)

       tGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCtt                                                                                  >  2:822101/1‑93 (MQ=255)

       tGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCtt                                                                                  >  1:1395506/1‑93 (MQ=255)

       tGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCtt                                                                                  <  1:4396611/93‑1 (MQ=255)

         gCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTc                                                                                <  1:4687519/93‑1 (MQ=255)

          ggACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCg                                                                               <  1:2838235/92‑1 (MQ=255)

            aCAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGc                                                                             <  1:4327685/93‑1 (MQ=255)

               gagGTGGTCGCAGCGGCGGTAGATGGGGGCATGATTTGATCCCAGCCCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTgc                                                                          <  2:7178893/93‑1 (MQ=255)

               gagGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAATTTCCAGCTCGCCTTTCGGCTgc                                                                          <  2:6407302/93‑1 (MQ=255)

                agGTGGTCGCAGCGGCAGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTgca                                                                         >  2:6708520/1‑93 (MQ=255)

                  gtggtCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTgcagc                                                                       >  2:8317008/1‑93 (MQ=255)

                   tggtCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTgcagca                                                                      >  1:8575113/1‑93 (MQ=255)

                   tggtCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTgcagca                                                                      <  2:1253396/93‑1 (MQ=255)

                    ggtCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTACAGCTCGCCTTTCGGCTGcagcag                                                                     >  2:3678343/1‑93 (MQ=255)

                      tCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTa                                                                   <  2:4986685/93‑1 (MQ=255)

                      tCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTa                                                                   <  2:2133442/93‑1 (MQ=255)

                      tCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTa                                                                   >  2:7873937/1‑93 (MQ=255)

                         cAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTa                                                                >  1:5146591/1‑93 (MQ=255)

                         cAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTa                                                                <  1:5463175/93‑1 (MQ=255)

                         cAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTa                                                                >  1:2638004/1‑93 (MQ=255)

                          aGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTaa                                                               >  1:6724081/1‑93 (MQ=255)

                          aGCGGCGGTAGATGGGGCCATGATTGGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTaa                                                               <  2:8670717/93‑1 (MQ=255)

                              gcggTAGATGGGGCCATGATTTTATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGcc                                                           >  1:5536262/1‑93 (MQ=255)

                              gcggTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGcc                                                           <  1:6469345/93‑1 (MQ=255)

                              gcggTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGcc                                                           >  1:4654739/1‑93 (MQ=255)

                                ggTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCat                                                         >  2:6206447/1‑93 (MQ=255)

                                ggTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCat                                                         >  1:3109413/1‑93 (MQ=255)

                                 gTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCata                                                        <  2:4038508/93‑1 (MQ=255)

                                  tAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCatat                                                       <  2:295651/93‑1 (MQ=255)

                                  tAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCatat                                                       <  2:4142458/93‑1 (MQ=255)

                                    gATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCa                                                     >  2:1633484/1‑93 (MQ=255)

                                    gATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCa                                                     >  1:5032573/1‑93 (MQ=255)

                                    gATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCa                                                     <  1:601454/93‑1 (MQ=255)

                                    gATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCa                                                     <  2:4331375/93‑1 (MQ=255)

                                    gATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCACATCa                                                     <  2:3046061/93‑1 (MQ=255)

                                     aTGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCAt                                                    >  2:529575/1‑93 (MQ=255)

                                      tGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCAtt                                                   <  2:5332503/93‑1 (MQ=255)

                                       ggggCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTc                                                  <  1:4105050/93‑1 (MQ=255)

                                        gggCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCg                                                 >  2:5645626/1‑93 (MQ=255)

                                         ggCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGa                                                <  1:4953745/93‑1 (MQ=255)

                                          gCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGAc                                               <  2:9384715/93‑1 (MQ=255)

                                           ccATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACa                                              >  1:4472986/1‑93 (MQ=255)

                                            cATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACaa                                             >  2:4186946/1‑93 (MQ=255)

                                            cATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACaa                                             >  1:5786113/1‑93 (MQ=255)

                                             aTGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAAc                                            >  1:3559455/1‑93 (MQ=255)

                                                aTTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGt                                         <  1:8034328/93‑1 (MQ=255)

                                                 tttGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCCGCAGTATTAACGCCATATCATTCTACAACTGtt                                        >  1:8283484/1‑93 (MQ=255)

                                                 tttGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGtt                                        >  1:118521/1‑93 (MQ=255)

                                                 ttcgATCCCACCCCGCCTGCAACGCGTTCATGTTAAATTCCAGCTCGTCTTTCGGCTGCAGCAGTATTAACGCCGTACCATTCGAGACCTGtt                                        <  2:4492235/90‑1 (MQ=255)

                                                   tGATACCACGCCTCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGa                                      <  2:6308553/93‑1 (MQ=255)

                                                      tCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGc                                   <  1:9804380/93‑1 (MQ=255)

                                                          cgACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGTCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGAt                               <  1:3867177/92‑1 (MQ=255)

                                                          aGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGAt                               <  2:7646573/93‑1 (MQ=255)

                                                           gACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATc                              >  1:1564010/1‑93 (MQ=255)

                                                           gACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATc                              >  1:32902/1‑93 (MQ=255)

                                                              cGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTg                           >  1:1017610/1‑93 (MQ=255)

                                                              cGCCTGCAACCCTTTCATGTTAAATTCCAGCTCGCCTTTCGGTTGCAGAAGTATTAACGCCATATCATTCGACACCTGCTGACGCACATCCTg                           >  1:2487049/1‑93 (MQ=255)

                                                               gCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGa                          >  1:5333483/1‑93 (MQ=255)

                                                               gCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGa                          >  1:3745747/1‑93 (MQ=255)

                                                               gCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGa                          >  2:2540562/1‑93 (MQ=255)

                                                               gCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGa                          >  1:7641239/1‑93 (MQ=255)

                                                               gCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGa                          <  1:6860617/93‑1 (MQ=255)

                                                                ccTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGAt                         >  1:1038647/1‑93 (MQ=255)

                                                                  tGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGAttt                       <  1:884003/93‑1 (MQ=255)

                                                                   gCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTTGGCTGCATCAGTATTAAAGCCATATCATTCGACAACTGTTGGCGCAGATCCTGATTTa                      >  2:7034731/1‑93 (MQ=255)

                                                                   gCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTa                      <  2:2417278/93‑1 (MQ=255)

                                                                     aaCGCTTTCATGTTAAATTTCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAAc                    >  2:9634761/1‑93 (MQ=255)

                                                                     aaCGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAAc                    <  2:3361527/93‑1 (MQ=255)

                                                                      aCGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACa                   <  1:5404995/93‑1 (MQ=255)

                                                                      aCGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACa                   <  1:6159000/93‑1 (MQ=255)

                                                                      aCGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACa                   <  1:9705200/93‑1 (MQ=255)

                                                                      aCGCTGTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACa                   >  2:5440187/1‑93 (MQ=255)

                                                                       cGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAt                  <  1:7095992/93‑1 (MQ=255)

                                                                       cGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAt                  >  2:8163076/1‑93 (MQ=255)

                                                                       cGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAt                  >  2:6012044/1‑93 (MQ=255)

                                                                          tttCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAtctc               >  1:9028436/1‑93 (MQ=255)

                                                                          tttCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAtctc               >  2:8517214/1‑93 (MQ=255)

                                                                          tttCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAtctc               >  1:9150014/1‑93 (MQ=255)

                                                                          tttCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACAtctc               >  2:10031258/1‑93 (MQ=255)

                                                                           ttCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATctct              <  1:9891314/93‑1 (MQ=255)

                                                                           ttCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATctct              >  1:8135603/1‑93 (MQ=255)

                                                                            tCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTa             <  2:1875803/93‑1 (MQ=255)

                                                                              aTGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTAcc           >  2:7297983/1‑93 (MQ=255)

                                                                               tGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCg          >  2:3215711/1‑93 (MQ=255)

                                                                                gTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGt         >  1:4156984/1‑93 (MQ=255)

                                                                                gTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAAAGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGt         >  2:7523846/1‑93 (MQ=255)

                                                                                  tAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCa       <  2:8052535/93‑1 (MQ=255)

                                                                                     aTTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGc    >  2:6840769/1‑93 (MQ=255)

                                                                                     aTTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGc    >  1:2115421/1‑93 (MQ=255)

                                                                                      ttCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCt   >  1:7546214/1‑93 (MQ=255)

                                                                                       tCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTa  >  2:9466132/1‑93 (MQ=255)

TCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTTGACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTA  >  NC_000913/3678114‑3678293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 295 total aligned reads displayed.

ACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAA  >  NC_000913/3678111‑3678297

ACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCA                                                                                                  >  SRR4302540.6227941/1‑94 (MQ=60)

ACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCA                                                                                                  <  SRR4302540.8310672/94‑1 (MQ=60)

ACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCA                                                                                                  <  SRR4302540.7104866/94‑1 (MQ=60)

ACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCA                                                                                                  <  SRR4302540.3592541/94‑1 (MQ=60)

ACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCA                                                                                                  <  SRR4302540.4809024/94‑1 (MQ=60)

ACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCA                                                                                                  <  SRR4302540.1802817/94‑1 (MQ=60)

 CGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAG                                                                                                 >  SRR4302540.3280102/1‑94 (MQ=60)

 CGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAG                                                                                                 >  SRR4302540.7748772/1‑94 (MQ=60)

 CGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAG                                                                                                 <  SRR4302540.7829883/94‑1 (MQ=60)

 CGTCATCCGTGGCGACAGAGGTCGTCGCGGCGGCGGTAGATGGGGCCATGATTTGACCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAG                                                                                                 <  SRR4302540.1895710/94‑1 (MQ=60)

  GTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGC                                                                                                >  SRR4302540.7033864/1‑94 (MQ=60)

  GTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGC                                                                                                <  SRR4302540.178739/94‑1 (MQ=60)

   TCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTGCAGCT                                                                                               >  SRR4302540.8414384/1‑94 (MQ=60)

    CATCCGTGGCGACAGAGGTGGTCGTAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTC                                                                                              >  SRR4302540.8817223/1‑94 (MQ=60)

    CATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTC                                                                                              >  SRR4302540.4638998/1‑94 (MQ=60)

    CATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTC                                                                                              <  SRR4302540.2124145/94‑1 (MQ=60)

    CATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTC                                                                                              >  SRR4302540.4815459/1‑94 (MQ=60)

     ATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCG                                                                                             >  SRR4302540.2764792/1‑94 (MQ=60)

     ATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCG                                                                                             >  SRR4302540.4756273/1‑94 (MQ=60)

     ATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCG                                                                                             <  SRR4302540.8144946/94‑1 (MQ=60)

     ATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCG                                                                                             >  SRR4302540.7537820/1‑94 (MQ=60)

     ATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCG                                                                                             <  SRR4302540.1992847/94‑1 (MQ=60)

      TCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGACATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGC                                                                                            >  SRR4302540.7863047/1‑94 (MQ=60)

       CCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCC                                                                                           <  SRR4302540.5661135/94‑1 (MQ=60)

        CGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCT                                                                                          >  SRR4302540.7273987/1‑94 (MQ=60)

        CGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCT                                                                                          <  SRR4302540.9479829/94‑1 (MQ=60)

        CGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCT                                                                                          >  SRR4302540.1223039/1‑94 (MQ=60)

        CGTGGCGACAGAGGTGGTCGCAGCGGCGGGAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCT                                                                                          >  SRR4302540.7794358/1‑94 (MQ=60)

         GTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTT                                                                                         <  SRR4302540.1973787/94‑1 (MQ=60)

         GTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTT                                                                                         >  SRR4302540.8695810/1‑94 (MQ=60)

         GTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTT                                                                                         >  SRR4302540.7749065/1‑94 (MQ=60)

         GTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTT                                                                                         >  SRR4302540.1410470/1‑94 (MQ=60)

          TGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGGATGCAAGGCTTTCCTGTTAAATTCCCGCTTGCCTTT                                                                                        >  SRR4302540.6132346/1‑94 (MQ=60)

          TGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTT                                                                                        >  SRR4302540.2882728/1‑94 (MQ=60)

          TGGCGACAGAGGTGGGCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTT                                                                                        <  SRR4302540.8029989/94‑1 (MQ=60)

           GGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTC                                                                                       <  SRR4302540.3937497/94‑1 (MQ=60)

           GGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTC                                                                                       <  SRR4302540.5947439/94‑1 (MQ=60)

           GGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTC                                                                                       >  SRR4302540.682969/1‑94 (MQ=60)

           GGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTC                                                                                       <  SRR4302540.2600446/94‑1 (MQ=60)

           GGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTC                                                                                       <  SRR4302540.9381175/94‑1 (MQ=60)

            GCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCG                                                                                      <  SRR4302540.6067723/94‑1 (MQ=60)

             CGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGG                                                                                     <  SRR4302540.1537791/94‑1 (MQ=60)

              GACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGC                                                                                    <  SRR4302540.8518000/94‑1 (MQ=60)

              GACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGC                                                                                    <  SRR4302540.7116823/94‑1 (MQ=60)

               ACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCT                                                                                   <  SRR4302540.4374800/94‑1 (MQ=60)

               ACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCT                                                                                   >  SRR4302540.8699503/1‑94 (MQ=60)

                CCGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTG                                                                                  <  SRR4302540.8821267/94‑1 (MQ=60)

                CAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTG                                                                                  <  SRR4302540.727088/94‑1 (MQ=60)

                 AGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGC                                                                                 >  SRR4302540.4240816/1‑94 (MQ=60)

                 AGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGC                                                                                 >  SRR4302540.9669865/1‑94 (MQ=60)

                  GAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCA                                                                                <  SRR4302540.6728921/94‑1 (MQ=60)

                    GGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGC                                                                              >  SRR4302540.7020090/1‑94 (MQ=60)

                     GTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCA                                                                             >  SRR4302540.8674748/1‑94 (MQ=60)

                     GTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCA                                                                             >  SRR4302540.6691138/1‑94 (MQ=60)

                     GTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCA                                                                             >  SRR4302540.7231698/1‑94 (MQ=60)

                     GTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGAAACGCTTTAATGTTACATTCCCGCTGGCCTTTCGGGTGCAGCG                                                                             >  SRR4302540.8674749/1‑94 (MQ=60)

                     GTGG‑CGCCGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAG                                                                            <  SRR4302540.6512157/94‑1 (MQ=60)

                      TGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAG                                                                            <  SRR4302540.3656342/94‑1 (MQ=60)

                       GGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGT                                                                           >  SRR4302540.6137620/1‑94 (MQ=60)

                         TCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTAT                                                                         <  SRR4302540.5626617/94‑1 (MQ=60)

                         TCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTAT                                                                         <  SRR4302540.3242309/94‑1 (MQ=60)

                         GCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTAT                                                                         <  SRR4302540.5270957/94‑1 (MQ=60)

                           GCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTA                                                                       >  SRR4302540.5202347/1‑94 (MQ=60)

                           GCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTA                                                                       >  SRR4302540.2666577/1‑94 (MQ=60)

                           GCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCATTTCGGCTGCAGCAGTATTA                                                                       >  SRR4302540.8031240/1‑94 (MQ=60)

                            CAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAA                                                                      <  SRR4302540.2773946/94‑1 (MQ=60)

                            CAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAA                                                                      <  SRR4302540.5523309/94‑1 (MQ=60)

                            CAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAA                                                                      <  SRR4302540.5876057/94‑1 (MQ=60)

                             AGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAAC                                                                     <  SRR4302540.5240016/94‑1 (MQ=60)

                             AGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAAC                                                                     >  SRR4302540.5146979/1‑94 (MQ=60)

                             AGCGGCGGTACATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAAC                                                                     <  SRR4302540.5543578/94‑1 (MQ=60)

                              GCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACG                                                                    <  SRR4302540.9187178/94‑1 (MQ=60)

                              GCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACG                                                                    >  SRR4302540.7907204/1‑94 (MQ=60)

                                GGCGGTAGATGGGGCCATGATTTTATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCC                                                                  >  SRR4302540.5597238/1‑94 (MQ=60)

                                GGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCC                                                                  >  SRR4302540.4704552/1‑94 (MQ=60)

                                  GGGTAGATGGGGCCATGATTTGATCCCAGACCTCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGCCTGCAGCAGTATTAACGCCAT                                                                <  SRR4302540.3667719/94‑1 (MQ=60)

                                  CGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCAT                                                                >  SRR4302540.3143435/1‑94 (MQ=60)

                                  CGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCAT                                                                >  SRR4302540.162838/1‑94 (MQ=60)

                                   GGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATA                                                               >  SRR4302540.9427027/1‑94 (MQ=60)

                                    GTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATAT                                                              >  SRR4302540.3948365/1‑94 (MQ=60)

                                    GTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATAT                                                              <  SRR4302540.769444/94‑1 (MQ=60)

                                    GTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATAT                                                              >  SRR4302540.332259/1‑94 (MQ=60)

                                    GTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATAT                                                              <  SRR4302540.3887066/94‑1 (MQ=60)

                                      AGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCA                                                            <  SRR4302540.9527098/94‑1 (MQ=60)

                                      AGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCA                                                            >  SRR4302540.5087027/1‑94 (MQ=60)

                                       GATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCAT                                                           >  SRR4302540.9998581/1‑94 (MQ=60)

                                       GATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCAT                                                           <  SRR4302540.607897/94‑1 (MQ=60)

                                        ATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATT                                                          >  SRR4302540.4716523/1‑94 (MQ=60)

                                        ATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATT                                                          <  SRR4302540.10103532/94‑1 (MQ=60)

                                        ATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATT                                                          <  SRR4302540.4168890/94‑1 (MQ=60)

                                        ATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATT                                                          >  SRR4302540.4075732/1‑94 (MQ=60)

                                         TGGGGCCATGATTTGATNNCAGACCGCCTGCAACGCTTTNATNTTAAANTCCANCTCGCCTTTCGGCTnnnnnnntnntaacnnnnnnnnannn                                                         >  SRR4302540.5792999/1‑68 (MQ=60)

                                         TGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTC                                                         >  SRR4302540.2158350/1‑94 (MQ=60)

                                          GGGGCCATGATTTGATCCCCGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCG                                                        <  SRR4302540.9078009/94‑1 (MQ=60)

                                          GGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCG                                                        <  SRR4302540.4149335/94‑1 (MQ=60)

                                             GCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACA                                                     >  SRR4302540.4521500/1‑94 (MQ=60)

                                              CCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAA                                                    <  SRR4302540.6278001/94‑1 (MQ=60)

                                              CCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAA                                                    >  SRR4302540.4024086/1‑94 (MQ=60)

                                              CCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAA                                                    >  SRR4302540.5850030/1‑94 (MQ=60)

                                              CCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAA                                                    >  SRR4302540.5058196/1‑94 (MQ=60)

                                               CATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAAC                                                   >  SRR4302540.3598340/1‑94 (MQ=60)

                                                ATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACT                                                  >  SRR4302540.8174628/1‑94 (MQ=60)

                                                ATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACT                                                  <  SRR4302540.7597686/94‑1 (MQ=60)

                                                ATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACT                                                  >  SRR4302540.4766023/1‑94 (MQ=60)

                                                ATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACT                                                  >  SRR4302540.111605/1‑94 (MQ=60)

                                                ATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACT                                                  <  SRR4302540.4431979/94‑1 (MQ=60)

                                                 TGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTCACGCCATATCATTCGACAACTG                                                 >  SRR4302540.1228212/1‑94 (MQ=60)

                                                 TGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTG                                                 >  SRR4302540.10006640/1‑94 (MQ=60)

                                                   ATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCCGCAGTATTAACGCCATATCATTCTACAACTGTT                                               >  SRR4302540.8379695/1‑94 (MQ=60)

                                                   ATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT                                               >  SRR4302540.6473528/1‑94 (MQ=60)

                                                   ATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT                                               >  SRR4302540.2681659/1‑94 (MQ=60)

                                                    TTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑G                                           <  SRR4302540.4462973/94‑1 (MQ=60)

                                                    TTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑G                                           <  SRR4302540.9282389/94‑1 (MQ=60)

                                                    TTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑G                                           >  SRR4302540.2136730/1‑94 (MQ=60)

                                                     TTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GA                                          >  SRR4302540.7521962/1‑94 (MQ=60)

                                                     TTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GA                                          >  SRR4302540.5438380/1‑94 (MQ=60)

                                                      TGATCCCAGACCGCCTGCAACGCTTGCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACTCCATATCATTCGACAACTGTT‑‑‑GAC                                         <  SRR4302540.88445/94‑1 (MQ=60)

                                                       GATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACG                                        >  SRR4302540.1039754/1‑94 (MQ=60)

                                                       GATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACG                                        >  SRR4302540.9918912/1‑94 (MQ=60)

                                                         TCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCA                                      >  SRR4302540.8758332/1‑94 (MQ=60)

                                                         TCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCA                                      <  SRR4302540.2991598/94‑1 (MQ=60)

                                                           CCAGACCGCCTGCAACGCTTTCCTGTTAAATTCCCGCTCGCCTTTCGGCTGCAGGAGTATTAACGCCATATCATTCGACCACTGTTCACGACGC                                       >  SRR4302540.5683318/1‑94 (MQ=60)

                                                           CCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGA                                    >  SRR4302540.3080263/1‑94 (MQ=60)

                                                           CCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGA                                    >  SRR4302540.5039309/1‑94 (MQ=60)

                                                           CCAGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGA                                    >  SRR4302540.1286359/1‑94 (MQ=60)

                                                             AGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATC                                  >  SRR4302540.33252/1‑94 (MQ=60)

                                                             AGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATC                                  >  SRR4302540.5409755/1‑94 (MQ=60)

                                                             AGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATC                                  >  SRR4302540.1581177/1‑94 (MQ=60)

                                                             AGACCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATC                                  <  SRR4302540.3909212/94‑1 (MQ=60)

                                                                CCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTG                               >  SRR4302540.1027918/1‑94 (MQ=60)

                                                                CCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTG                               <  SRR4302540.4720015/94‑1 (MQ=60)

                                                                CCGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTG                               <  SRR4302540.1896851/94‑1 (MQ=60)

                                                                CCGCCTGCAACCCTTTCATGTTAAATTCCAGCTCGCCTTTCGGTTGCAGAAGTATTAACGCCATATCATTCGACACCTGCT‑‑‑GACGCACATCCTG                               >  SRR4302540.2513839/1‑94 (MQ=60)

                                                                 ctcctcccACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGA                              <  SRR4302540.5500833/86‑1 (MQ=60)

                                                                 CGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGA                              <  SRR4302540.7655538/94‑1 (MQ=60)

                                                                 CGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGA                              >  SRR4302540.5391932/1‑94 (MQ=60)

                                                                 CGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGA                              >  SRR4302540.7727234/1‑94 (MQ=60)

                                                                 CGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGA                              >  SRR4302540.9169687/1‑94 (MQ=60)

                                                                 CGCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGA                              >  SRR4302540.3786623/1‑94 (MQ=60)

                                                                  GCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGAT                             <  SRR4302540.6936646/94‑1 (MQ=60)

                                                                  GCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGAT                             <  SRR4302540.9945950/94‑1 (MQ=60)

                                                                  GCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGAT                             <  SRR4302540.8288217/94‑1 (MQ=60)

                                                                  GCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGAT                             >  SRR4302540.1049209/1‑94 (MQ=60)

                                                                  CCCTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGAT                             <  SRR4302540.5565830/94‑1 (MQ=60)

                                                                    CTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTT                           <  SRR4302540.4432718/94‑1 (MQ=60)

                                                                    CTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTT                           >  SRR4302540.7428043/1‑94 (MQ=60)

                                                                    CTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTT                           >  SRR4302540.1039165/1‑94 (MQ=60)

                                                                    CTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTT                           >  SRR4302540.1543070/1‑94 (MQ=60)

                                                                    CTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTT                           >  SRR4302540.5486116/1‑94 (MQ=60)

                                                                    CTGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTT                           >  SRR4302540.4188546/1‑94 (MQ=60)

                                                                     TGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTA                          >  SRR4302540.7610846/1‑94 (MQ=60)

                                                                     TGCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTA                          >  SRR4302540.725423/1‑94 (MQ=60)

                                                                      GCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAA                         <  SRR4302540.8969345/94‑1 (MQ=60)

                                                                      GCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAA                         >  SRR4302540.8572706/1‑94 (MQ=60)

                                                                      GCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAA                         >  SRR4302540.9833867/1‑94 (MQ=60)

                                                                      GCAACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGATGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAA                         <  SRR4302540.9127850/94‑1 (MQ=60)

                                                                        AACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACA                       >  SRR4302540.5288687/1‑94 (MQ=60)

                                                                        AACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACA                       >  SRR4302540.6728944/1‑94 (MQ=60)

                                                                         ACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACAT                      <  SRR4302540.6227622/94‑1 (MQ=60)

                                                                         ACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACAT                      <  SRR4302540.5464419/94‑1 (MQ=60)

                                                                         ACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACAT                      <  SRR4302540.4465869/94‑1 (MQ=60)

                                                                         ACGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACAT                      <  SRR4302540.6613371/94‑1 (MQ=60)

                                                                          CGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATC                     >  SRR4302540.9878134/1‑94 (MQ=60)

                                                                          CGCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATC                     <  SRR4302540.7174959/94‑1 (MQ=60)

                                                                           GCTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCT                    <  SRR4302540.5152356/94‑1 (MQ=60)

                                                                            CTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTC                   >  SRR4302540.4309158/1‑94 (MQ=60)

                                                                            CTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTC                   >  SRR4302540.9259891/1‑94 (MQ=60)

                                                                            CTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTC                   <  SRR4302540.242038/94‑1 (MQ=60)

                                                                            CTTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTC                   >  SRR4302540.9136772/1‑94 (MQ=60)

                                                                             TTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCT                  >  SRR4302540.1143414/1‑94 (MQ=60)

                                                                             TTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCT                  <  SRR4302540.3505917/94‑1 (MQ=60)

                                                                             TTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCT                  <  SRR4302540.3792926/94‑1 (MQ=60)

                                                                             TTTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCT                  >  SRR4302540.8230027/1‑94 (MQ=60)

                                                                             TTTCATGTTAAATTCCAGCTCGCCGTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACCACTGTT‑‑‑GACGCAGATCCTGAGTTAACATCTCT                  >  SRR4302540.547360/1‑94 (MQ=60)

                                                                              TTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTA                 <  SRR4302540.10006808/94‑1 (MQ=60)

                                                                              TTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTA                 <  SRR4302540.3063210/94‑1 (MQ=60)

                                                                              TTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTA                 >  SRR4302540.8147663/1‑94 (MQ=60)

                                                                              TTCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTA                 >  SRR4302540.3487025/1‑94 (MQ=60)

                                                                               TCATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTAC                <  SRR4302540.4643210/94‑1 (MQ=60)

                                                                                CATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACC               >  SRR4302540.6850635/1‑94 (MQ=60)

                                                                                CATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACC               <  SRR4302540.10017601/94‑1 (MQ=60)

                                                                                 ATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCG              >  SRR4302540.8259627/1‑94 (MQ=60)

                                                                                 ATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCG              >  SRR4302540.5433062/1‑94 (MQ=60)

                                                                                 ATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCG              <  SRR4302540.7651418/94‑1 (MQ=60)

                                                                                 ATGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCG              >  SRR4302540.6924358/1‑94 (MQ=60)

                                                                                  TGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGT             >  SRR4302540.8939298/1‑94 (MQ=60)

                                                                                  TGTTAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGT             >  SRR4302540.4202022/1‑94 (MQ=60)

                                                                                     TAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAG          <  SRR4302540.1150117/94‑1 (MQ=60)

                                                                                     TAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAG          <  SRR4302540.4381518/94‑1 (MQ=60)

                                                                                     TAAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAG          >  SRR4302540.2484335/1‑94 (MQ=60)

                                                                                      AAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAGG         <  SRR4302540.5034636/94‑1 (MQ=60)

                                                                                      AAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAGG         <  SRR4302540.9707436/94‑1 (MQ=60)

                                                                                      AAATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAGG         <  SRR4302540.2641469/94‑1 (MQ=60)

                                                                                        ATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAGGCT       <  SRR4302540.4487887/94‑1 (MQ=60)

                                                                                        ATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAGGCT       >  SRR4302540.4698108/1‑94 (MQ=60)

                                                                                        ATTCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAGGCT       >  SRR4302540.7630789/1‑94 (MQ=60)

                                                                                          TCCAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTAT     <  SRR4302540.4721215/94‑1 (MQ=60)

                                                                                            CAGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTA   <  SRR4302540.4321308/94‑1 (MQ=60)

                                                                                             AGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAA  >  SRR4302540.9840974/1‑94 (MQ=60)

                                                                                             AGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAA  >  SRR4302540.1795288/1‑94 (MQ=60)

ACGTCATCCGTGGCGACAGAGGTGGTCGCAGCGGCGGTAGATGGGGCCATGATTTGATCCCAGACCGCCTGCAACGCTTTCATGTTAAATTCCGGCTCGCCTTTCGGCTGCAGCAGTATTAACGCCATATCATTCGACAACTGTT‑‑‑GACGCAGATCCTGATTTAACATCTCTACCGTCAGGCTATTAA  >  NC_000913/3678111‑3678297

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`