Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,686,775 +T intergenic (‑23/+9) b3530 ← / ← yhjM putative oxidoreductase subunit/putative endoglucanase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,686,7751.T99.8% 1630.6 / ‑4.5 449intergenic (‑23/+9)b3530/yhjMputative oxidoreductase subunit/putative endoglucanase
Reads supporting (aligned to +/- strand):  ref base . (1/0);  new base T (208/240);  total (209/240)
Fisher's exact test for biased strand distribution p-value = 4.65e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 492 total aligned reads displayed.

CGCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCG‑GAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATC  >  NC_000913/3686684‑3686861
                                                                                            |                                                                                      
 gCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGCCGGGCAGACCGAGGGAAAGCgtg                                                                                       >  2:3465825/1‑91 (MQ=255)
 gCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCgtg                                                                                       >  2:9756963/1‑91 (MQ=255)
 gCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCgtg                                                                                       <  1:9531863/93‑3 (MQ=255)
 gCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCgtg                                                                                       >  2:2427602/1‑91 (MQ=255)
 gCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCgtg                                                                                       >  2:6910925/1‑91 (MQ=255)
  cTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGCAAGCgtga                                                                                      >  1:9657307/1‑90 (MQ=255)
  cTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCgtga                                                                                      <  2:2216292/93‑4 (MQ=255)
  cTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCgtga                                                                                      >  1:7391533/1‑90 (MQ=255)
   ttCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCgtgaa                                                                                     >  2:7159103/1‑89 (MQ=255)
   ttCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCgtgaa                                                                                     <  1:3191143/93‑5 (MQ=255)
   ttCGCCTAACCGAACTTGCTCCAGCAACTGTCGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCgtgaa                                                                                     <  1:9899488/93‑5 (MQ=255)
     cGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAata                                                                                   <  1:1731167/93‑1 (MQ=255)
      gCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAatat                                                                                  <  2:1169034/93‑1 (MQ=255)
       ccTAAACGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATg                                                                                 >  2:552795/1‑93 (MQ=255)
         tAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGtt                                                                               >  2:5788930/1‑93 (MQ=255)
         tAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGtt                                                                               <  2:1522917/93‑1 (MQ=255)
         tAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGtt                                                                               >  2:9808484/1‑93 (MQ=255)
          aaCCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGttt                                                                              <  1:4085434/93‑1 (MQ=255)
           aCCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTa                                                                             >  2:6771677/1‑93 (MQ=255)
            ccGAACTTGCTCCAGCAACTGTTGCTGAGGGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAg                                                                            <  1:1915680/93‑1 (MQ=255)
            ccGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAg                                                                            >  1:8061571/1‑93 (MQ=255)
            ccGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAg                                                                            <  1:4365315/93‑1 (MQ=255)
             cGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAgt                                                                           <  2:4549008/93‑1 (MQ=255)
              gAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAgtg                                                                          <  1:4862563/93‑1 (MQ=255)
              gAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAgtg                                                                          <  2:4139827/93‑1 (MQ=255)
               aaCTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAgtgt                                                                         <  1:3238774/93‑1 (MQ=255)
               aaCTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAgtgt                                                                         <  1:8457511/93‑1 (MQ=255)
               aaCTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAgtgt                                                                         <  2:9393386/93‑1 (MQ=255)
                aCTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGtgtg                                                                        >  2:6302603/1‑93 (MQ=255)
                aCTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGtgtg                                                                        >  1:3111390/1‑93 (MQ=255)
                aCTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGtgtg                                                                        >  1:783439/1‑93 (MQ=255)
                     cTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAAttt                                                                   >  2:7282664/1‑93 (MQ=255)
                         aGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGGAAGCGTGAATATGTTTAGTGTGAATTTgcgc                                                               >  1:827775/1‑93 (MQ=255)
                          gCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCa                                                              <  2:2832686/93‑1 (MQ=255)
                             aCTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTc                                                           >  1:629061/1‑93 (MQ=255)
                             aCTGTTGCTGAGCGGTTGGTGCTGCCTCAACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTc                                                           <  1:10019233/93‑1 (MQ=255)
                              cTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTcc                                                          <  2:169824/93‑1 (MQ=255)
                               tGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCt                                                         <  2:357639/93‑1 (MQ=255)
                               tGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCt                                                         <  2:1956269/93‑1 (MQ=255)
                               tGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCt                                                         <  2:7899119/93‑1 (MQ=255)
                                gTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTg                                                        >  2:2474053/1‑93 (MQ=255)
                                 ttGCGGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGACAGACCGAGGGAAAGCGTGAGTATGTTTAGTGTGAATTTGCGCATTCCTgg                                                       >  2:4043093/1‑93 (MQ=255)
                                   gCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGcc                                                     <  1:2602172/93‑1 (MQ=255)
                                      gAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCa                                                  <  2:4427061/93‑1 (MQ=255)
                                      gAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCa                                                  <  1:7002317/93‑1 (MQ=255)
                                       aGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAg                                                 <  1:3866158/93‑1 (MQ=255)
                                        gCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGt                                                <  1:3650221/93‑1 (MQ=255)
                                        gCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGt                                                >  1:5815957/1‑93 (MQ=255)
                                        gCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGAAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGt                                                >  2:7653505/1‑93 (MQ=255)
                                          ggTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCa                                              >  1:1678560/1‑93 (MQ=255)
                                           gTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAg                                             <  1:6599254/93‑1 (MQ=255)
                                           gTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAg                                             >  2:1358815/1‑93 (MQ=255)
                                           gTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAg                                             <  1:1451874/93‑1 (MQ=255)
                                           gTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAg                                             <  1:9976613/93‑1 (MQ=255)
                                            ttGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAgg                                            >  2:4225546/1‑93 (MQ=255)
                                                tgctgcCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGtaat                                        <  2:2068836/93‑1 (MQ=255)
                                                 gctgcCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGtaata                                       >  2:9457038/1‑93 (MQ=255)
                                                    gcCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACt                                    <  1:1230346/93‑1 (MQ=255)
                                                     ccTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTc                                   >  2:6507908/1‑93 (MQ=255)
                                                      cTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCa                                  >  1:3521083/1‑93 (MQ=255)
                                                      cTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCa                                  <  1:5224801/93‑1 (MQ=255)
                                                      cTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCa                                  <  2:5961651/93‑1 (MQ=255)
                                                       tCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCAc                                 <  1:9278461/93‑1 (MQ=255)
                                                       tCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCAc                                 <  1:6062588/93‑1 (MQ=255)
                                                       tCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGCAATAACTCAc                                 >  1:8317601/1‑93 (MQ=255)
                                                          aCCATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCtt                              >  2:10041851/1‑93 (MQ=255)
                                                           ccATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCttt                             >  1:9803453/1‑93 (MQ=255)
                                                           ccATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCttt                             >  1:7699516/1‑93 (MQ=255)
                                                            cATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCtttt                            <  1:6896232/93‑1 (MQ=255)
                                                            cATCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCtttt                            >  1:4749757/1‑93 (MQ=255)
                                                             aTCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTg                           <  1:6149520/93‑1 (MQ=255)
                                                              tCGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGt                          >  1:7623345/1‑93 (MQ=255)
                                                               cGGCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTc                         >  1:2082086/1‑93 (MQ=255)
                                                                 gCATGACGGCCAGACCTAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCga                       <  2:123723/93‑1 (MQ=255)
                                                                 gCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCga                       >  1:3757708/1‑93 (MQ=255)
                                                                 gCATGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCga                       <  2:8739163/93‑1 (MQ=255)
                                                                   aTGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCgaga                     >  2:4704766/1‑93 (MQ=255)
                                                                   aTGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCgaga                     >  2:9017056/1‑93 (MQ=255)
                                                                    tGACGGCCAGACCTAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGaa                    <  2:4926855/93‑1 (MQ=255)
                                                                    tGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGaa                    >  1:7209253/1‑93 (MQ=255)
                                                                    tGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGaa                    >  2:2633820/1‑93 (MQ=255)
                                                                    tGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGaa                    <  1:4635554/93‑1 (MQ=255)
                                                                    tGACGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGCGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGaa                    >  1:867222/1‑93 (MQ=255)
                                                                      aCGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGc                  <  2:1570814/93‑1 (MQ=255)
                                                                      aCGGCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGc                  >  2:8260179/1‑93 (MQ=255)
                                                                         gCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGa               <  2:3179471/93‑1 (MQ=255)
                                                                         gCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGa               <  2:8462641/93‑1 (MQ=255)
                                                                         gCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGa               >  1:2905216/1‑93 (MQ=255)
                                                                         gCCAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGa               <  1:8780446/93‑1 (MQ=255)
                                                                          ccAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGaa              <  1:3045526/93‑1 (MQ=255)
                                                                          ccAGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGaa              >  2:5158728/1‑93 (MQ=255)
                                                                            aGACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAAc            <  2:5323336/93‑1 (MQ=255)
                                                                             gACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACg           >  2:3779865/1‑93 (MQ=255)
                                                                             gACCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACg           >  2:2946134/1‑93 (MQ=255)
                                                                              aCCGAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACgg          >  1:6485889/1‑93 (MQ=255)
                                                                                 gAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGgtgt       <  1:4289835/93‑1 (MQ=255)
                                                                                 gAGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGgtgt       <  1:5387841/93‑1 (MQ=255)
                                                                                  aGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGtt      <  2:7736280/93‑1 (MQ=255)
                                                                                  aGGGAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGtt      <  1:2371791/93‑1 (MQ=255)
                                                                                     gAAAGCGTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGAt   >  1:5022966/1‑93 (MQ=255)
                                                                                            |                                                                                      
CGCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCG‑GAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATC  >  NC_000913/3686684‑3686861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 283 total aligned reads displayed.
GTCGCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑G‑GAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATCCCAGCCT  >  NC_000913/3686682‑3686868
                                                                                              |                                                                                              
GTCGCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑G                                                                                                <  SRR4302540.3063803/94‑1 (MQ=60)
GTCGCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑G                                                                                                <  SRR4302540.9358735/94‑1 (MQ=60)
   GCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑Gtga                                                                                             <  SRR4302540.9644702/94‑4 (MQ=60)
   GCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑Gtga                                                                                             >  SRR4302540.7473895/1‑91 (MQ=60)
   GCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑Gtga                                                                                             >  SRR4302540.823926/1‑91 (MQ=60)
   GCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑Gcga                                                                                             >  SRR4302540.9895135/1‑91 (MQ=60)
    CTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAA                                                                                            <  SRR4302540.203361/94‑1 (MQ=60)
     TTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAAT                                                                                           <  SRR4302540.3225806/94‑1 (MQ=60)
     TTCGCCTAACCGAACTTGCTCCAGCAACTGTCGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAAT                                                                                           <  SRR4302540.10015135/94‑1 (MQ=60)
      TCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGTAAGC‑GTGAATA                                                                                          <  SRR4302540.2800448/94‑1 (MQ=60)
      TCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATA                                                                                          <  SRR4302540.4606626/94‑1 (MQ=60)
      TCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATA                                                                                          <  SRR4302540.4426279/94‑1 (MQ=60)
       CGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGT‑GTGAATAT                                                                                         <  SRR4302540.1142072/94‑1 (MQ=60)
       CGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATAT                                                                                         <  SRR4302540.3220955/94‑1 (MQ=60)
       CGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATAT                                                                                         >  SRR4302540.3828293/1‑94 (MQ=60)
       CGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATAT                                                                                         <  SRR4302540.1749851/94‑1 (MQ=60)
         CCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGT                                                                                       >  SRR4302540.5134392/1‑94 (MQ=60)
         CCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGT                                                                                       >  SRR4302540.180811/1‑94 (MQ=60)
         CCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGT                                                                                       <  SRR4302540.4064461/94‑1 (MQ=60)
          CTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTT                                                                                      >  SRR4302540.7628490/1‑94 (MQ=60)
          CTAACCGAACTTGCTCCAGCAACTGGTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTT                                                                                      >  SRR4302540.2268047/1‑94 (MQ=60)
           TAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGCGG‑GAATATGTTT                                                                                     >  SRR4302540.3119026/1‑94 (MQ=60)
           TAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTT                                                                                     >  SRR4302540.7310984/1‑94 (MQ=60)
            AACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTA                                                                                    >  SRR4302540.3894960/1‑94 (MQ=60)
            AACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTA                                                                                    >  SRR4302540.1203431/1‑94 (MQ=60)
            AACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTA                                                                                    <  SRR4302540.5000957/94‑1 (MQ=60)
             ACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAG                                                                                   <  SRR4302540.3289285/94‑1 (MQ=60)
             ACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAG                                                                                   >  SRR4302540.8155148/1‑94 (MQ=60)
              CCGAACTTGCTCCAGCAACTGTTGCTGAGGGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGT                                                                                  <  SRR4302540.1936587/94‑1 (MQ=60)
              CCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGT                                                                                  <  SRR4302540.4412758/94‑1 (MQ=60)
              CCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGT                                                                                  <  SRR4302540.8629848/94‑1 (MQ=60)
               CGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTG                                                                                 >  SRR4302540.7066152/1‑94 (MQ=60)
               CGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTG                                                                                 >  SRR4302540.1719815/1‑94 (MQ=60)
               CGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTG                                                                                 >  SRR4302540.9233897/1‑94 (MQ=60)
               CGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTG                                                                                 >  SRR4302540.8022944/1‑94 (MQ=60)
                GAACTTGCTCCAGCAACTGTTGCTGAGCTGGTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGT                                                                                <  SRR4302540.4833486/94‑1 (MQ=60)
                GAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGT                                                                                <  SRR4302540.4914710/94‑1 (MQ=60)
                 AACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTG                                                                               <  SRR4302540.8555711/94‑1 (MQ=60)
                 AACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTG                                                                               >  SRR4302540.791772/1‑94 (MQ=60)
                 AACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTG                                                                               >  SRR4302540.2141379/1‑94 (MQ=60)
                 AACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTG                                                                               >  SRR4302540.3145423/1‑94 (MQ=60)
                   CTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAA                                                                             >  SRR4302540.7646356/1‑94 (MQ=60)
                    TTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAAT                                                                            <  SRR4302540.7442848/94‑1 (MQ=60)
                    TTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAAT                                                                            <  SRR4302540.6171081/94‑1 (MQ=60)
                     TGCTCCAGCAACTGTTGCTTAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATT                                                                           <  SRR4302540.518861/94‑1 (MQ=60)
                     TGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATT                                                                           >  SRR4302540.6449018/1‑94 (MQ=60)
                     TGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATT                                                                           <  SRR4302540.2939001/94‑1 (MQ=60)
                      GCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTT                                                                          >  SRR4302540.4714583/1‑94 (MQ=60)
                      GCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTT                                                                          <  SRR4302540.3615521/94‑1 (MQ=60)
                        TCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGC                                                                        >  SRR4302540.4541095/1‑94 (MQ=60)
                        TCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGC                                                                        <  SRR4302540.8142796/94‑1 (MQ=60)
                         CCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCG                                                                       >  SRR4302540.7736051/1‑94 (MQ=60)
                         CCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCG                                                                       <  SRR4302540.9837277/94‑1 (MQ=60)
                          CAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGGAAGC‑GTGAATATGTTTAGTGTGAATTTGCGC                                                                      >  SRR4302540.836573/1‑94 (MQ=60)
                          CAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGC                                                                      >  SRR4302540.7218755/1‑94 (MQ=60)
                          CAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGC                                                                      >  SRR4302540.8379304/1‑94 (MQ=60)
                           AGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCA                                                                     <  SRR4302540.4410918/94‑1 (MQ=60)
                           AGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCA                                                                     <  SRR4302540.4911592/94‑1 (MQ=60)
                            GCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCAT                                                                    <  SRR4302540.2365715/94‑1 (MQ=60)
                             CAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATT                                                                   <  SRR4302540.8374579/94‑1 (MQ=60)
                              AACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTC                                                                  >  SRR4302540.635754/1‑94 (MQ=60)
                              AACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTC                                                                  >  SRR4302540.9441138/1‑94 (MQ=60)
                               ACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCC                                                                 >  SRR4302540.602097/1‑94 (MQ=60)
                               ACTGTTGCTGAGCGGTTGGTGCTGCCTCAACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCC                                                                 <  SRR4302540.10135844/94‑1 (MQ=60)
                                CTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGGAAGC‑GTGAATATGGTTAGTGTGAATTTGCGCATTCCG                                                                >  SRR4302540.5356209/1‑94 (MQ=60)
                                CTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCT                                                                >  SRR4302540.1712866/1‑94 (MQ=60)
                                 TGTTGCTTGGCGGTTGGTGGTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTG                                                               <  SRR4302540.2561114/94‑1 (MQ=60)
                                 TGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTG                                                               >  SRR4302540.2364574/1‑94 (MQ=60)
                                 TGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTG                                                               <  SRR4302540.8526747/94‑1 (MQ=60)
                                  GTTGCTGAGCGGTTTGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGG                                                              <  SRR4302540.5262540/94‑1 (MQ=60)
                                  GTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGG                                                              >  SRR4302540.6345711/1‑94 (MQ=60)
                                  GTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGG                                                              <  SRR4302540.7230483/94‑1 (MQ=60)
                                  GTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGG                                                              <  SRR4302540.7799175/94‑1 (MQ=60)
                                  GTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGG                                                              >  SRR4302540.7898647/1‑94 (MQ=60)
                                    TGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCC                                                            <  SRR4302540.1381466/94‑1 (MQ=60)
                                     GCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCC                                                           <  SRR4302540.2630238/94‑1 (MQ=60)
                                     GCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCC                                                           <  SRR4302540.2630237/94‑1 (MQ=60)
                                      CTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCC                                                          <  SRR4302540.6101519/94‑1 (MQ=60)
                                      CTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCC                                                          <  SRR4302540.2933881/94‑1 (MQ=60)
                                        GAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAG                                                        <  SRR4302540.5589849/94‑1 (MQ=60)
                                        GAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAG                                                        <  SRR4302540.7080015/94‑1 (MQ=60)
                                         AGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGT                                                       >  SRR4302540.5880241/1‑94 (MQ=60)
                                         AGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGT                                                       <  SRR4302540.6189250/94‑1 (MQ=60)
                                         AGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGT                                                       <  SRR4302540.3908185/94‑1 (MQ=60)
                                          GCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTC                                                      <  SRR4302540.3690210/94‑1 (MQ=60)
                                          GCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTC                                                      >  SRR4302540.135307/1‑94 (MQ=60)
                                           CGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCA                                                     <  SRR4302540.6157202/94‑1 (MQ=60)
                                           CGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCA                                                     <  SRR4302540.1331770/94‑1 (MQ=60)
                                            GGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAG                                                    <  SRR4302540.9715928/94‑1 (MQ=60)
                                            GGTTGGTGCTGCATCGATCATCGACATGGCGGCCATACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAG                                                    <  SRR4302540.10153237/94‑1 (MQ=60)
                                             GTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGG                                                   <  SRR4302540.6672333/94‑1 (MQ=60)
                                             GTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGG                                                   <  SRR4302540.10092954/94‑1 (MQ=60)
                                             GTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGG                                                   <  SRR4302540.1672338/94‑1 (MQ=60)
                                             GTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGG                                                   <  SRR4302540.1467660/94‑1 (MQ=60)
                                             GTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGG                                                   >  SRR4302540.4416833/1‑94 (MQ=60)
                                             GTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGG                                                   <  SRR4302540.1859176/94‑1 (MQ=60)
                                              TTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGT                                                  <  SRR4302540.6645342/94‑1 (MQ=60)
                                               TGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTA                                                 <  SRR4302540.9652661/94‑1 (MQ=60)
                                               TGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTA                                                 <  SRR4302540.4365370/94‑1 (MQ=60)
                                               TGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTA                                                 >  SRR4302540.1711538/1‑94 (MQ=60)
                                                 GTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAAT                                               <  SRR4302540.6550858/94‑1 (MQ=60)
                                                 GTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAAT                                               <  SRR4302540.8653521/94‑1 (MQ=60)
                                                 GTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGCAAT                                               >  SRR4302540.4707755/1‑94 (MQ=60)
                                                 GTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGGGCATTTGCGCCTTCCTGGCCCCAGcaaggaaaa                                               >  SRR4302540.7786419/1‑85 (MQ=60)
                                                  TGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATA                                              <  SRR4302540.9032576/94‑1 (MQ=60)
                                                  TGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATA                                              <  SRR4302540.9616551/94‑1 (MQ=60)
                                                   GCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAA                                             <  SRR4302540.5905435/94‑1 (MQ=60)
                                                   GCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAA                                             <  SRR4302540.3700104/94‑1 (MQ=60)
                                                   GCTGCCTCGACCAGCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAA                                             <  SRR4302540.6594883/94‑1 (MQ=60)
                                                    CTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAAC                                            >  SRR4302540.8419515/1‑94 (MQ=60)
                                                    CTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAAC                                            <  SRR4302540.4225274/94‑1 (MQ=60)
                                                    CTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAAC                                            >  SRR4302540.8419516/1‑94 (MQ=60)
                                                    CTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAAC                                            <  SRR4302540.8862704/94‑1 (MQ=60)
                                                     TGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACT                                           >  SRR4302540.9492454/1‑94 (MQ=60)
                                                     TGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACT                                           >  SRR4302540.3209578/1‑94 (MQ=60)
                                                     TGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACT                                           >  SRR4302540.10084160/1‑94 (MQ=60)
                                                      GCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTC                                          >  SRR4302540.9971337/1‑94 (MQ=60)
                                                      GCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTC                                          >  SRR4302540.7639373/1‑94 (MQ=60)
                                                       gctgGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATAGGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCA                                         <  SRR4302540.5556950/90‑1 (MQ=60)
                                                       GCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCA                                         <  SRR4302540.2966289/94‑1 (MQ=60)
                                                       CCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCA                                         <  SRR4302540.808479/94‑1 (MQ=60)
                                                       CCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCA                                         >  SRR4302540.3559454/1‑94 (MQ=60)
                                                        CTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCAC                                        <  SRR4302540.736175/94‑1 (MQ=60)
                                                        CTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGCAATAACTCAC                                        >  SRR4302540.8414160/1‑94 (MQ=60)
                                                         TCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACC                                       <  SRR4302540.6129972/94‑1 (MQ=60)
                                                          CGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCT                                      >  SRR4302540.9812089/1‑94 (MQ=60)
                                                           GACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTT                                     <  SRR4302540.4320345/94‑1 (MQ=60)
                                                           GACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTT                                     >  SRR4302540.64893/1‑94 (MQ=60)
                                                           GACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTT                                     >  SRR4302540.5407164/1‑94 (MQ=60)
                                                           GACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTT                                     <  SRR4302540.4030872/94‑1 (MQ=60)
                                                            ACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTT                                    >  SRR4302540.9918214/1‑94 (MQ=60)
                                                            ACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTT                                    >  SRR4302540.7787409/1‑94 (MQ=60)
                                                             CCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTT                                   >  SRR4302540.4800447/1‑94 (MQ=60)
                                                             CCATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTT                                   <  SRR4302540.9339997/94‑1 (MQ=60)
                                                              CATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTG                                  >  SRR4302540.3604334/1‑94 (MQ=60)
                                                              CATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTG                                  <  SRR4302540.3769106/94‑1 (MQ=60)
                                                              CATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTG                                  <  SRR4302540.6972772/94‑1 (MQ=60)
                                                              CATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTG                                  >  SRR4302540.6324033/1‑94 (MQ=60)
                                                              CATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTG                                  <  SRR4302540.4055498/94‑1 (MQ=60)
                                                               ATCGGCATGACGGGCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAAGTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGT                                 <  SRR4302540.3548560/94‑1 (MQ=60)
                                                               ATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGT                                 >  SRR4302540.3671709/1‑94 (MQ=60)
                                                               ATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGT                                 <  SRR4302540.3221518/94‑1 (MQ=60)
                                                               ATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGT                                 >  SRR4302540.3846312/1‑94 (MQ=60)
                                                               ATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGT                                 <  SRR4302540.10027867/94‑1 (MQ=60)
                                                               ATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGT                                 <  SRR4302540.6218012/94‑1 (MQ=60)
                                                               ATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGT                                 >  SRR4302540.1949429/1‑94 (MQ=60)
                                                               ATCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGT                                 >  SRR4302540.1874191/1‑94 (MQ=60)
                                                                TCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTC                                >  SRR4302540.2104455/1‑94 (MQ=60)
                                                                TCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTC                                <  SRR4302540.5007752/94‑1 (MQ=60)
                                                                TCGGCATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTC                                <  SRR4302540.7773972/94‑1 (MQ=60)
                                                                 CGGCATGACGGCCAGACCGAGNGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCG                               <  SRR4302540.420399/94‑1 (MQ=60)
                                                                    CATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGA                            <  SRR4302540.4138526/94‑1 (MQ=60)
                                                                    CATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGA                            >  SRR4302540.6836783/1‑94 (MQ=60)
                                                                     ATGACGGCCAGACCGAGGGGAAGC‑GAGAATATGATTAGCGTGAATTTGCGCATTACTCGCCCCAGTCAGGTAATAACTCTCCATTTGTCGAGAA                           >  SRR4302540.2706374/1‑94 (MQ=57)
                                                                     ATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAA                           >  SRR4302540.5063370/1‑94 (MQ=60)
                                                                     ATGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGCGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAA                           >  SRR4302540.876423/1‑94 (MQ=60)
                                                                      TGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAG                          <  SRR4302540.7039624/94‑1 (MQ=60)
                                                                      TGACGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAG                          <  SRR4302540.4685189/94‑1 (MQ=60)
                                                                         CGGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGG                       >  SRR4302540.6999874/1‑94 (MQ=60)
                                                                          GGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGA                      >  SRR4302540.3129854/1‑94 (MQ=60)
                                                                          GGCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGA                      <  SRR4302540.2423532/94‑1 (MQ=60)
                                                                           GCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAA                     <  SRR4302540.8882110/94‑1 (MQ=60)
                                                                           GCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAA                     >  SRR4302540.9827853/1‑94 (MQ=60)
                                                                           GCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAA                     <  SRR4302540.7251839/94‑1 (MQ=60)
                                                                           GCCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAA                     <  SRR4302540.1685402/94‑1 (MQ=60)
                                                                            CCAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAA                    <  SRR4302540.3078941/94‑1 (MQ=60)
                                                                            CCAGACCGAGGGAAAGC‑GTGAATATGCTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGCTAATAACTCACCTTTTGTCGAGAAGCGGAAA                    >  SRR4302540.9758708/1‑94 (MQ=60)
                                                                             CAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGctactaattaacctttgttccggaagggaaaac                   >  SRR4302540.3380770/1‑61 (MQ=60)
                                                                             CAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAAG                   >  SRR4302540.3380768/1‑94 (MQ=60)
                                                                             CAGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAAC                   <  SRR4302540.2976324/94‑1 (MQ=60)
                                                                              AGACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACG                  >  SRR4302540.7877032/1‑94 (MQ=60)
                                                                               GACCGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGG                 >  SRR4302540.3232460/1‑94 (MQ=60)
                                                                                  CGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGT              >  SRR4302540.476355/1‑94 (MQ=60)
                                                                                  CGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGT              <  SRR4302540.8841863/94‑1 (MQ=60)
                                                                                  CGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGT              <  SRR4302540.8841864/94‑1 (MQ=60)
                                                                                  CGAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGT              >  SRR4302540.374063/1‑94 (MQ=60)
                                                                                   GAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTACTAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTT             >  SRR4302540.5422131/1‑94 (MQ=60)
                                                                                   GAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTT             <  SRR4302540.5447096/94‑1 (MQ=60)
                                                                                   GAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTT             <  SRR4302540.4336505/94‑1 (MQ=60)
                                                                                   GAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTT             >  SRR4302540.68823/1‑94 (MQ=60)
                                                                                   GAGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTT             >  SRR4302540.10111047/1‑94 (MQ=60)
                                                                                    AGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTG            >  SRR4302540.3260787/1‑94 (MQ=60)
                                                                                    AGGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTG            <  SRR4302540.9992453/94‑1 (MQ=60)
                                                                                     GGGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGA           <  SRR4302540.6639779/94‑1 (MQ=60)
                                                                                      GGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGAT          >  SRR4302540.2922792/1‑94 (MQ=60)
                                                                                      GGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGAT          <  SRR4302540.6784332/94‑1 (MQ=60)
                                                                                      GGAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGAT          >  SRR4302540.5077338/1‑94 (MQ=60)
                                                                                      GGAAAGC‑GTGAATATGTTTAGTGTGAATCTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGAT          <  SRR4302540.8242053/94‑1 (MQ=60)
                                                                                       GAAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATC         <  SRR4302540.3109837/94‑1 (MQ=60)
                                                                                        AAAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATCC        <  SRR4302540.1505477/94‑1 (MQ=60)
                                                                                         AAGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATCCC       >  SRR4302540.5290818/1‑94 (MQ=60)
                                                                                          AGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATCCCA      >  SRR4302540.9119650/1‑94 (MQ=60)
                                                                                          AGC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATCCCA      >  SRR4302540.5483197/1‑94 (MQ=60)
                                                                                           GC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATCCCAG     <  SRR4302540.8300390/94‑1 (MQ=60)
                                                                                           GC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATCCCAG     <  SRR4302540.8300389/94‑1 (MQ=60)
                                                                                           GC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATCCCAG     >  SRR4302540.2438398/1‑94 (MQ=60)
                                                                                           GC‑GTGAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATCCCAC     >  SRR4302540.6326018/1‑94 (MQ=60)
                                                                                              T‑GAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATCCCAGCCT  <  SRR4302540.6270144/94‑1 (MQ=60)
                                                                                              T‑GAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATCCCAGCCT  <  SRR4302540.6270143/94‑1 (MQ=60)
                                                                                              T‑GAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATCCCAGCCT  >  SRR4302540.10013075/1‑94 (MQ=60)
                                                                                              |                                                                                              
GTCGCTTCGCCTAACCGAACTTGCTCCAGCAACTGTTGCTGAGCGGTTGGTGCTGCCTCGACCATCGGCATGACGGCCAGACCGAGGGAAAGC‑G‑GAATATGTTTAGTGTGAATTTGCGCATTCCTGGCCCCAGTCAGGTAATAACTCACCTTTTGTCGAGAAGCGGAAACGGTGTTGATCCCAGCCT  >  NC_000913/3686682‑3686868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑