Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,729,567	T→C	L270L (TTG→CTG)	xylF →	xylose binding protein transport system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,729,567	0	T	C	92.8%	1635.3 / 86.5	587	L270L (TTG→CTG)	xylF	xylose binding protein transport system
Reads supporting (aligned to +/- strand): ref base T (27/15); new base C (275/270); total (302/285)
Fisher's exact test for biased strand distribution p-value = 1.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01

Only 100 of 627 total aligned reads displayed.

TAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTC  >  NC_000913/3729475‑3729659

  gCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGttgctg                                                                                            >  2:1798000/1‑93 (MQ=255)

  gCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGttgctg                                                                                            >  2:4788865/1‑93 (MQ=255)

     aTCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCa                                                                                         <  1:3609707/93‑1 (MQ=255)

     aTCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCa                                                                                         >  2:8163717/1‑93 (MQ=255)

      tctcCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCaa                                                                                        >  2:2285345/1‑93 (MQ=255)

       ctcCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCaaa                                                                                       <  1:3911276/93‑1 (MQ=255)

       ctcCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCaaa                                                                                       <  2:3348944/93‑1 (MQ=255)

          cGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATAc                                                                                    <  1:6780812/93‑1 (MQ=255)

          cGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATAc                                                                                    <  2:493333/93‑1 (MQ=255)

               aGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCg                                                                               >  2:9357083/1‑93 (MQ=255)

               aGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCg                                                                               >  1:2658188/1‑93 (MQ=255)

                ggATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGc                                                                              >  2:9753436/1‑93 (MQ=255)

                ggAGGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGc                                                                              <  2:1532182/93‑1 (MQ=255)

                  aTGCGGATCTCGCGGGTTTTAAACATATTGCAGCCGGTACGCAAACTATGACGGTGTATAGACCAATTACGTTGCTGGCAAATACTGCCGCAg                                                                            <  1:8981115/93‑1 (MQ=255)

                    gCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGaa                                                                          <  2:2146566/93‑1 (MQ=255)

                     cGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGaaa                                                                         <  2:9598221/93‑1 (MQ=255)

                      ggATCTCGCAGGTATTAAACGTATTGCCGCCGGTACGCAAACTAAGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAAt                                                                        <  2:6508188/93‑1 (MQ=255)

                       gATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAAtt                                                                       >  1:1792209/1‑93 (MQ=255)

                        aTCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGCCAAATACTGCCGCAGCAATTg                                                                      >  1:7395221/1‑93 (MQ=255)

                          ctcGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGcc                                                                    >  1:911657/1‑93 (MQ=255)

                            cGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGt                                                                  >  1:7435748/1‑93 (MQ=255)

                            cGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGt                                                                  >  1:4591249/1‑93 (MQ=255)

                            cGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGt                                                                  >  1:1594098/1‑93 (MQ=255)

                             gCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGtt                                                                 >  1:1102206/1‑93 (MQ=255)

                             gCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGtt                                                                 >  1:5735688/1‑93 (MQ=255)

                             gCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGtt                                                                 >  1:2089062/1‑93 (MQ=255)

                             gCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGtt                                                                 >  1:1917667/1‑93 (MQ=255)

                              cAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTg                                                                <  1:4104084/93‑1 (MQ=255)

                               aGGTATTAAACGTATTGCTGCCGGTACTCAAACTAGGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGa                                                               <  1:837447/93‑1 (MQ=255)

                                ggTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAg                                                              >  1:1235269/1‑93 (MQ=255)

                                 gTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGt                                                             >  1:4838525/1‑93 (MQ=255)

                                 gTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGt                                                             <  1:7798406/93‑1 (MQ=255)

                                 gTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGt                                                             >  1:5476242/1‑93 (MQ=255)

                                   aTTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTg                                                           >  2:7465009/1‑93 (MQ=255)

                                   aTTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTg                                                           <  2:532072/93‑1 (MQ=255)

                                    ttAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTgg                                                          >  1:8226490/1‑93 (MQ=255)

                                       aaCGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCa                                                       >  1:10026264/1‑93 (MQ=255)

                                         cctATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGGTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAAt                                                     <  1:3319239/91‑1 (MQ=255)

                                         cGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAAt                                                     <  2:8260480/93‑1 (MQ=255)

                                         agTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAAt                                                     <  1:7688901/92‑1 (MQ=255)

                                          gTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATg                                                    <  2:5099581/93‑1 (MQ=255)

                                          gTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATg                                                    <  1:6612605/93‑1 (MQ=255)

                                          gTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATg                                                    <  2:3209481/93‑1 (MQ=255)

                                             ttGCTGTTGGGACGCAAACTATGATGGTGTATAAACCTATTATGTTGCTGGCAAATACTGCCTCATAAATTGCCGTTGAGTTTGGCAATGGTc                                                 >  2:8921754/1‑93 (MQ=255)

                                             ttGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTc                                                 >  1:4953988/1‑93 (MQ=255)

                                              tgctgcCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCa                                                <  2:7663263/93‑1 (MQ=255)

                                              tgctgcCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCa                                                <  1:3056925/93‑1 (MQ=255)

                                               gctgcCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAg                                               >  2:1730924/1‑93 (MQ=255)

                                               gctgcCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAg                                               <  1:7930437/93‑1 (MQ=255)

                                                 tgcCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGa                                             >  2:4358175/1‑93 (MQ=255)

                                                 tgcCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGa                                             >  2:2931867/1‑93 (MQ=255)

                                                  gcCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGaa                                            <  2:2740491/93‑1 (MQ=255)

                                                   ccGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAAc                                           <  2:3499804/93‑1 (MQ=255)

                                                    cGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAAcc                                          >  1:9516322/1‑93 (MQ=255)

                                                      gTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCaa                                        >  1:6308743/1‑93 (MQ=255)

                                                      gTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCaa                                        <  1:2933244/93‑1 (MQ=255)

                                                      gTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCaa                                        >  2:461523/1‑93 (MQ=255)

                                                           gaaaCTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCa                                   <  1:8706618/92‑1 (MQ=255)

                                                            aaaCTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAg                                  <  2:7951448/93‑1 (MQ=255)

                                                             aaCTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGa                                 >  1:3458112/1‑93 (MQ=255)

                                                             aaCTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGa                                 >  1:4747197/1‑93 (MQ=255)

                                                             aaCTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGa                                 >  2:7158349/1‑93 (MQ=255)

                                                             aaCTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGa                                 >  2:6826288/1‑93 (MQ=255)

                                                              aCTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGAt                                >  2:1050416/1‑93 (MQ=255)

                                                               cTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATa                               >  2:6014198/1‑93 (MQ=255)

                                                                tATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATAc                              >  2:3093262/1‑93 (MQ=255)

                                                                 aTGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATAcc                             <  2:2475985/93‑1 (MQ=255)

                                                                 aTGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATAcc                             >  1:2494527/1‑93 (MQ=255)

                                                                 aTGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATAcc                             >  2:5732509/1‑93 (MQ=255)

                                                                  tGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACca                            <  2:2344811/93‑1 (MQ=255)

                                                                   gACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACcac                           >  1:5114085/1‑93 (MQ=255)

                                                                    aCGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACcaca                          <  2:3997119/93‑1 (MQ=255)

                                                                    aCGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACcaca                          <  2:3828834/93‑1 (MQ=255)

                                                                    aCGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACcaca                          >  1:313962/1‑93 (MQ=255)

                                                                     cGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCacac                         <  2:4165984/93‑1 (MQ=255)

                                                                     cGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCacac                         <  2:8625620/93‑1 (MQ=255)

                                                                      ggTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACt                        >  2:780328/1‑93 (MQ=255)

                                                                      ggTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACt                        >  1:9197733/1‑93 (MQ=255)

                                                                         gtATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGaa                     >  2:2001992/1‑93 (MQ=255)

                                                                         gtATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGaa                     <  1:7051547/93‑1 (MQ=255)

                                                                          tataAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGaat                    >  1:9366508/1‑93 (MQ=255)

                                                                           ataAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGaata                   >  2:9067507/1‑93 (MQ=255)

                                                                            taAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGaataa                  <  2:4251894/93‑1 (MQ=255)

                                                                            taAACCTATTACGTTGCTGCCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGaataa                  <  1:9782785/93‑1 (MQ=255)

                                                                             aacccTATAACGTAGCGGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGaataat                 <  2:124720/90‑1 (MQ=255)

                                                                              aaCCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATg                <  2:2641789/93‑1 (MQ=255)

                                                                               aCCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATgg               <  2:5510938/93‑1 (MQ=255)

                                                                                ccTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGc              >  1:2288993/1‑93 (MQ=255)

                                                                                ccTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGc              >  1:5922393/1‑93 (MQ=255)

                                                                                 cTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGcc             >  2:883852/1‑93 (MQ=255)

                                                                                  tATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCt            >  1:23785/1‑93 (MQ=255)

                                                                                  tATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCt            >  1:4050356/1‑93 (MQ=255)

                                                                                     tACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGaa         <  1:4276987/93‑1 (MQ=255)

                                                                                      aCGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGaaa        >  2:3566775/1‑93 (MQ=255)

                                                                                       cGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAg       <  2:6250580/93‑1 (MQ=255)

                                                                                       cGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAg       >  1:524731/1‑93 (MQ=255)

                                                                                       cGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAg       <  1:341812/93‑1 (MQ=255)

                                                                                        gttgctGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGa      <  2:8436636/93‑1 (MQ=255)

                                                                                        gttgctGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGa      <  1:1408429/93‑1 (MQ=255)

                                                                                           gttgGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGt   <  1:8569698/93‑1 (MQ=255)

TAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTC  >  NC_000913/3729475‑3729659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 337 total aligned reads displayed.

GTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTCC  >  NC_000913/3729474‑3729660

GTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGACGGTACGCACACCATAACGGTGTATAACCCTATTACGTTGC                                                                                               >  SRR4302540.3805763/1‑94 (MQ=60)

   GCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGG                                                                                            <  SRR4302540.4734881/94‑1 (MQ=60)

   GCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGG                                                                                            <  SRR4302540.8206481/94‑1 (MQ=60)

   GCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGG                                                                                            <  SRR4302540.1756375/94‑1 (MQ=60)

     AATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTTGCA                                                                                          >  SRR4302540.4941669/1‑94 (MQ=60)

     AATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCA                                                                                          >  SRR4302540.7610805/1‑94 (MQ=60)

       TCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAA                                                                                        <  SRR4302540.1268030/94‑1 (MQ=60)

       TCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAA                                                                                        <  SRR4302540.2359914/94‑1 (MQ=60)

       TCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAA                                                                                        >  SRR4302540.8881232/1‑94 (MQ=60)

       TCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAA                                                                                        <  SRR4302540.3353527/94‑1 (MQ=60)

        CTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAAT                                                                                       >  SRR4302540.6638962/1‑94 (MQ=60)

        CTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAAT                                                                                       <  SRR4302540.4112859/94‑1 (MQ=60)

          CCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCTAATAC                                                                                     <  SRR4302540.5309512/94‑1 (MQ=60)

          CCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATAC                                                                                     <  SRR4302540.6866620/94‑1 (MQ=60)

          CCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATAC                                                                                     <  SRR4302540.2174794/94‑1 (MQ=60)

          CCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATAC                                                                                     <  SRR4302540.8741996/94‑1 (MQ=60)

           CGGCGAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACT                                                                                    <  SRR4302540.8546308/94‑1 (MQ=60)

           CGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAGATACT                                                                                    >  SRR4302540.518786/1‑94 (MQ=60)

           CGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACT                                                                                    <  SRR4302540.6855788/94‑1 (MQ=60)

           CGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACT                                                                                    <  SRR4302540.1083949/94‑1 (MQ=60)

           CGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACT                                                                                    <  SRR4302540.764212/94‑1 (MQ=60)

            GGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTG                                                                                   <  SRR4302540.10148940/94‑1 (MQ=60)

            GACCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGGACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTG                                                                                   <  SRR4302540.5013736/94‑1 (MQ=60)

             GCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGC                                                                                  >  SRR4302540.3484339/1‑94 (MQ=60)

              CCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCC                                                                                 >  SRR4302540.6960400/1‑94 (MQ=60)

               CAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCG                                                                                <  SRR4302540.3941485/94‑1 (MQ=60)

               CAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCG                                                                                >  SRR4302540.2687033/1‑94 (MQ=60)

                AGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGC                                                                               <  SRR4302540.7774203/94‑1 (MQ=60)

                AGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGC                                                                               >  SRR4302540.4219246/1‑94 (MQ=60)

                AGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGC                                                                               >  SRR4302540.4964311/1‑94 (MQ=60)

                AGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGC                                                                               >  SRR4302540.5631769/1‑94 (MQ=60)

                AGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGC                                                                               <  SRR4302540.212875/94‑1 (MQ=60)

                 GGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCA                                                                              >  SRR4302540.2167588/1‑94 (MQ=60)

                  GATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAG                                                                             <  SRR4302540.9705366/94‑1 (MQ=60)

                  GATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAG                                                                             >  SRR4302540.9505193/1‑94 (MQ=60)

                  GATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAG                                                                             >  SRR4302540.9340816/1‑94 (MQ=60)

                  GATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAG                                                                             >  SRR4302540.9306635/1‑94 (MQ=60)

                   ATGCGGATCTCGCGGGTTTTAAACATATTGCAGCCGGTACGCAAACTATGACGGTGTATAGACCAATTACGTTGCTGGCAAATACTGCCGCAGA                                                                            <  SRR4302540.9088166/94‑1 (MQ=60)

                   ATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGA                                                                            >  SRR4302540.3161080/1‑94 (MQ=60)

                    TGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAA                                                                           >  SRR4302540.5945907/1‑94 (MQ=60)

                       GGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATT                                                                        >  SRR4302540.587556/1‑94 (MQ=60)

                       GGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATT                                                                        <  SRR4302540.5121341/94‑1 (MQ=60)

                       GGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATT                                                                        >  SRR4302540.4502087/1‑94 (MQ=60)

                       GGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATT                                                                        >  SRR4302540.7927765/1‑94 (MQ=60)

                       GGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATT                                                                        >  SRR4302540.1811685/1‑94 (MQ=60)

                        GATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTG                                                                       <  SRR4302540.2679442/94‑1 (MQ=60)

                         ATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGC                                                                      >  SRR4302540.1244844/1‑94 (MQ=60)

                          TCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCC                                                                     >  SRR4302540.3641131/1‑94 (MQ=60)

                           CTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCG                                                                    >  SRR4302540.5152725/1‑94 (MQ=60)

                            TCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGT                                                                   >  SRR4302540.7518598/1‑94 (MQ=60)

                            TCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGT                                                                   >  SRR4302540.4640667/1‑94 (MQ=60)

                            TCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGT                                                                   >  SRR4302540.1611516/1‑94 (MQ=60)

                             CGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTT                                                                  >  SRR4302540.1938592/1‑94 (MQ=60)

                             CGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTT                                                                  >  SRR4302540.5798874/1‑94 (MQ=60)

                               CAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGA                                                                >  SRR4302540.6582856/1‑94 (MQ=60)

                               CAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGA                                                                >  SRR4302540.4231020/1‑94 (MQ=60)

                               CAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGA                                                                <  SRR4302540.4148359/94‑1 (MQ=60)

                               CAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGA                                                                <  SRR4302540.7491239/94‑1 (MQ=60)

                                AGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAG                                                               <  SRR4302540.7726729/94‑1 (MQ=60)

                                AGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAG                                                               <  SRR4302540.1427106/94‑1 (MQ=60)

                                AGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAG                                                               >  SRR4302540.1247888/1‑94 (MQ=60)

                                AGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAG                                                               <  SRR4302540.1932219/94‑1 (MQ=60)

                                AGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAG                                                               >  SRR4302540.3795751/1‑94 (MQ=60)

                                 GGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATACACCTATTACGTTGCTGGGAAATACTGCCGCAGAAATTGCCGTTGAGT                                                              >  SRR4302540.3738651/1‑94 (MQ=60)

                                 GGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGT                                                              >  SRR4302540.2893029/1‑94 (MQ=60)

                                 GGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGT                                                              >  SRR4302540.4890351/1‑94 (MQ=60)

                                 GGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGT                                                              >  SRR4302540.5536515/1‑94 (MQ=60)

                                 GGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGT                                                              >  SRR4302540.3594663/1‑94 (MQ=60)

                                  GTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTT                                                             <  SRR4302540.9146089/94‑1 (MQ=60)

                                  GTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTT                                                             >  SRR4302540.2334202/1‑94 (MQ=60)

                                  GTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTT                                                             <  SRR4302540.7889560/94‑1 (MQ=60)

                                  GTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTT                                                             >  SRR4302540.2639908/1‑94 (MQ=60)

                                  GTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTT                                                             >  SRR4302540.9778082/1‑94 (MQ=60)

                                   TATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTG                                                            <  SRR4302540.4630848/94‑1 (MQ=60)

                                   TATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTG                                                            <  SRR4302540.961051/94‑1 (MQ=60)

                                    ATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGG                                                           >  SRR4302540.9169180/1‑94 (MQ=60)

                                    ATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGG                                                           >  SRR4302540.8322120/1‑94 (MQ=60)

                                    ATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGG                                                           <  SRR4302540.6057323/94‑1 (MQ=60)

                                     TTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGG                                                          >  SRR4302540.4977083/1‑94 (MQ=60)

                                     TTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGG                                                          <  SRR4302540.8574422/94‑1 (MQ=60)

                                     TTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGG                                                          <  SRR4302540.3392650/94‑1 (MQ=60)

                                     TTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCGATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGG                                                          >  SRR4302540.7794812/1‑94 (MQ=60)

                                      TAAACGGATTGCTGCCGGTACACAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGC                                                         <  SRR4302540.8783428/94‑1 (MQ=60)

                                       AAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCA                                                        >  SRR4302540.10142926/1‑94 (MQ=60)

                                        AACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGACATTGCCGTTGAGTTGGGCAA                                                       >  SRR4302540.7377776/1‑94 (MQ=60)

                                        AACGTATTGCTGCCGGTACGCAAACTATGACGGTATATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAA                                                       >  SRR4302540.7377775/1‑94 (MQ=60)

                                          CGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATG                                                     <  SRR4302540.6811536/94‑1 (MQ=60)

                                          CCTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGGTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATG                                                     <  SRR4302540.3355647/94‑1 (MQ=60)

                                           GTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGG                                                    >  SRR4302540.4143293/1‑94 (MQ=60)

                                           GTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGG                                                    >  SRR4302540.9532094/1‑94 (MQ=60)

                                           GTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGG                                                    >  SRR4302540.9203162/1‑94 (MQ=60)

                                           GTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGG                                                    <  SRR4302540.6685828/94‑1 (MQ=60)

                                           GTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGG                                                    >  SRR4302540.6197772/1‑94 (MQ=60)

                                           GTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGG                                                    <  SRR4302540.3143262/94‑1 (MQ=60)

                                           GTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGG                                                    <  SRR4302540.523203/94‑1 (MQ=60)

                                            TATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGT                                                   <  SRR4302540.1486182/94‑1 (MQ=60)

                                             ATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTC                                                  >  SRR4302540.7074115/1‑94 (MQ=60)

                                             ATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTC                                                  >  SRR4302540.5007515/1‑94 (MQ=60)

                                               TGCTGCCGGTACGCGAACTATGACGGTGTATAAACCTATTACATTGCTGGCAAATCCTACCGCAGAAATTACCGTTGAGATGGGCAATGGTCAG                                                <  SRR4302540.9032273/94‑1 (MQ=60)

                                               TGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAG                                                <  SRR4302540.8342041/94‑1 (MQ=60)

                                               TGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAG                                                >  SRR4302540.300788/1‑94 (MQ=60)

                                               TGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAG                                                >  SRR4302540.300789/1‑94 (MQ=60)

                                               TGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAG                                                <  SRR4302540.3090466/94‑1 (MQ=60)

                                                GCTGNCNNTACGCAAACTATGNCNGTNTATAAACCTATTACGTTGNTGGCAAATACTNCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGG                                               <  SRR4302540.4855504/94‑1 (MQ=60)

                                                GCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGG                                               <  SRR4302540.1722097/94‑1 (MQ=60)

                                                GCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGG                                               <  SRR4302540.8022873/94‑1 (MQ=60)

                                                 CTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGA                                              <  SRR4302540.4020956/94‑1 (MQ=60)

                                                  TGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAA                                             <  SRR4302540.6451942/94‑1 (MQ=60)

                                                  TGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAA                                             <  SRR4302540.8738866/94‑1 (MQ=60)

                                                   GCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAAC                                            <  SRR4302540.2479597/94‑1 (MQ=60)

                                                    CCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACC                                           >  SRR4302540.9629027/1‑94 (MQ=60)

                                                     CGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCA                                          >  SRR4302540.2566482/1‑94 (MQ=60)

                                                     CGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCA                                          >  SRR4302540.2086169/1‑94 (MQ=60)

                                                      GGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAA                                         >  SRR4302540.3326785/1‑94 (MQ=60)

                                                      GGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAA                                         >  SRR4302540.6378994/1‑94 (MQ=60)

                                                       GTACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAA                                        <  SRR4302540.3960278/94‑1 (MQ=60)

                                                         TCGCAAACAATGTCGGTGAATAAACCTATTACGTTGCTGGCAAATCCTGCCGCAGAAATTGCCGTTGAGTTGGAAAATGGTCAGGAACCAAAAG                                      <  SRR4302540.7776459/94‑1 (MQ=60)

                                                         ACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAG                                      <  SRR4302540.9605400/94‑1 (MQ=60)

                                                         ACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAG                                      >  SRR4302540.3112821/1‑94 (MQ=60)

                                                         ACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAG                                      >  SRR4302540.4360027/1‑94 (MQ=60)

                                                         ACGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAG                                      <  SRR4302540.574556/94‑1 (MQ=60)

                                                          CGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGC                                     >  SRR4302540.1869789/1‑94 (MQ=60)

                                                          CGCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGC                                     <  SRR4302540.3469951/94‑1 (MQ=60)

                                                           GCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAACAGCA                                    >  SRR4302540.2092422/1‑94 (MQ=60)

                                                           GCAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCA                                    >  SRR4302540.6248347/1‑94 (MQ=60)

                                                            GAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAG                                   <  SRR4302540.8807679/94‑1 (MQ=60)

                                                            CAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAG                                   >  SRR4302540.4837535/1‑94 (MQ=60)

                                                            CAAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAG                                   <  SRR4302540.6802122/94‑1 (MQ=60)

                                                             AAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGA                                  >  SRR4302540.3495750/1‑94 (MQ=60)

                                                             AAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGA                                  >  SRR4302540.4398757/1‑94 (MQ=60)

                                                             AAACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGA                                  >  SRR4302540.4797855/1‑94 (MQ=60)

                                                              AACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGAT                                 <  SRR4302540.846640/94‑1 (MQ=60)

                                                              AACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGAT                                 >  SRR4302540.2401965/1‑94 (MQ=60)

                                                              AACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGAT                                 >  SRR4302540.5853518/1‑94 (MQ=60)

                                                              AACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGAT                                 >  SRR4302540.2288242/1‑94 (MQ=60)

                                                              AACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGAT                                 >  SRR4302540.1606392/1‑94 (MQ=60)

                                                               ACTATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATA                                <  SRR4302540.1514849/94‑1 (MQ=60)

                                                                 TATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACC                              >  SRR4302540.2521407/1‑94 (MQ=60)

                                                                 TATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACC                              <  SRR4302540.7495353/94‑1 (MQ=60)

                                                                 TATGACGGGGTATAAACATATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACC                              <  SRR4302540.3027180/94‑1 (MQ=60)

                                                                  ATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCC                             >  SRR4302540.3413481/1‑94 (MQ=60)

                                                                  ATGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCA                             <  SRR4302540.112631/94‑1 (MQ=60)

                                                                   TGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCAC                            <  SRR4302540.9267584/94‑1 (MQ=60)

                                                                   TGACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCAC                            >  SRR4302540.5169444/1‑94 (MQ=60)

                                                                    GACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACA                           >  SRR4302540.317087/1‑94 (MQ=60)

                                                                     ACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACAC                          <  SRR4302540.8410017/94‑1 (MQ=60)

                                                                     ACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACAC                          <  SRR4302540.6241903/94‑1 (MQ=60)

                                                                     ACGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACAC                          <  SRR4302540.8410018/94‑1 (MQ=60)

                                                                      CGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACT                         <  SRR4302540.9300983/94‑1 (MQ=60)

                                                                      CGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACT                         >  SRR4302540.9308065/1‑94 (MQ=60)

                                                                      CGGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACT                         >  SRR4302540.4097270/1‑94 (MQ=60)

                                                                       GGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTG                        <  SRR4302540.204018/94‑1 (MQ=60)

                                                                       GGTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTG                        <  SRR4302540.10105094/94‑1 (MQ=60)

                                                                        GTGTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGA                       >  SRR4302540.798466/1‑94 (MQ=60)

                                                                          GTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAAT                     >  SRR4302540.6718932/1‑94 (MQ=60)

                                                                          GTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAAT                     >  SRR4302540.9478037/1‑94 (MQ=60)

                                                                          GTATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAAT                     <  SRR4302540.7129970/94‑1 (MQ=60)

                                                                           TATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATA                    <  SRR4302540.4742476/94‑1 (MQ=60)

                                                                            ATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAA                   <  SRR4302540.4287891/94‑1 (MQ=60)

                                                                            ATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAA                   >  SRR4302540.8906344/1‑94 (MQ=60)

                                                                            ATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAA                   >  SRR4302540.7510952/1‑94 (MQ=60)

                                                                            ATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAA                   <  SRR4302540.2964403/94‑1 (MQ=60)

                                                                            ATAAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAA                   >  SRR4302540.3966402/1‑94 (MQ=60)

                                                                              AAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATG                 >  SRR4302540.9891431/1‑94 (MQ=60)

                                                                              AAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAACAGCAGATACCACACTGAATGATG                 >  SRR4302540.3564703/1‑94 (MQ=60)

                                                                              AAACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATG                 <  SRR4302540.8192855/94‑1 (MQ=60)

                                                                                ACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGC               >  SRR4302540.2313616/1‑94 (MQ=60)

                                                                                ACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGC               <  SRR4302540.1872391/94‑1 (MQ=60)

                                                                                ACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGC               <  SRR4302540.3688714/94‑1 (MQ=60)

                                                                                ACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGC               >  SRR4302540.5987826/1‑94 (MQ=60)

                                                                                ACCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGC               >  SRR4302540.7821702/1‑94 (MQ=60)

                                                                                 CCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCC              <  SRR4302540.5426989/94‑1 (MQ=60)

                                                                                 CCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCC              >  SRR4302540.2869433/1‑94 (MQ=60)

                                                                                 CCTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCC              >  SRR4302540.4833284/1‑94 (MQ=60)

                                                                                  CTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCT             >  SRR4302540.4094022/1‑94 (MQ=60)

                                                                                  CTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCT             <  SRR4302540.8818542/94‑1 (MQ=60)

                                                                                  CTATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCT             >  SRR4302540.24047/1‑94 (MQ=60)

                                                                                   TATTATGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTG            >  SRR4302540.7962686/1‑94 (MQ=60)

                                                                                    ATTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGA           <  SRR4302540.8245910/94‑1 (MQ=60)

                                                                                     TTACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAA          <  SRR4302540.3457043/94‑1 (MQ=60)

                                                                                      TACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAA         <  SRR4302540.1195398/94‑1 (MQ=60)

                                                                                       TCGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAG        <  SRR4302540.3284717/94‑1 (MQ=60)

                                                                                       ACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAG        <  SRR4302540.5589611/94‑1 (MQ=60)

                                                                                       ACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAG        <  SRR4302540.1344428/94‑1 (MQ=60)

                                                                                       ACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAG        <  SRR4302540.1091577/94‑1 (MQ=60)

                                                                                       ACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAG        <  SRR4302540.2763391/94‑1 (MQ=60)

                                                                                       ACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAG        <  SRR4302540.1417854/94‑1 (MQ=60)

                                                                                       ACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAG        <  SRR4302540.7225794/94‑1 (MQ=60)

                                                                                       ACGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAG        >  SRR4302540.530391/1‑94 (MQ=60)

                                                                                        CGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGA       <  SRR4302540.3077837/94‑1 (MQ=60)

                                                                                        CGTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGA       <  SRR4302540.345274/94‑1 (MQ=60)

                                                                                         GTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGAT      <  SRR4302540.2507171/94‑1 (MQ=60)

                                                                                         GTTGCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGAT      <  SRR4302540.4173650/94‑1 (MQ=60)

                                                                                            GTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTC   <  SRR4302540.8669243/94‑1 (MQ=60)

                                                                                            GCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTC   <  SRR4302540.9352513/94‑1 (MQ=60)

                                                                                            GCTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTC   <  SRR4302540.4702129/94‑1 (MQ=60)

                                                                                             TTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTCC  <  SRR4302540.9459483/94‑1 (MQ=60)

                                                                                             CTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTCC  >  SRR4302540.5365441/1‑94 (MQ=60)

                                                                                             CTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTCC  >  SRR4302540.3393018/1‑94 (MQ=60)

                                                                                             CTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTCC  >  SRR4302540.9912533/1‑94 (MQ=60)

GTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTCC  >  NC_000913/3729474‑3729660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`