Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,730,104 T→C L92P (CTG→CCG)  xylG → putative ATP‑binding protein of xylose transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,730,1040TC100.0% 2248.8 / NA 691L92P (CTG→CCG) xylGputative ATP‑binding protein of xylose transport system
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (304/387);  total (304/387)

Only 100 of 709 total aligned reads displayed.

AAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTAC  >  NC_000913/3730014‑3730193
                                                                                          |                                                                                         
aaaTTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCgg                                                                                         >  1:676676/1‑93 (MQ=255)
aaaTTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCgg                                                                                         <  2:226860/93‑1 (MQ=255)
aaaTTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCgg                                                                                         >  2:6607891/1‑93 (MQ=255)
 aaTTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGt                                                                                        <  2:9122706/93‑1 (MQ=255)
 aaTTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGt                                                                                        >  1:2809886/1‑93 (MQ=255)
   ttattTTTGGGGGAGAAGCGATGCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGa                                                                                      <  1:54374/93‑1 (MQ=255)
   ttattTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGa                                                                                      >  2:4188313/1‑93 (MQ=255)
     attTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGaaa                                                                                    >  1:7676438/1‑93 (MQ=255)
      tttttGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAg                                                                                   >  1:5005081/1‑93 (MQ=255)
       ttttGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGa                                                                                  >  1:4144274/1‑93 (MQ=255)
           gCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTg                                                                              <  2:4693063/93‑1 (MQ=255)
           gCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTg                                                                              <  2:6183343/93‑1 (MQ=255)
             gggAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGAc                                                                            <  2:9848277/93‑1 (MQ=255)
             gggAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGAc                                                                            >  2:6347473/1‑93 (MQ=255)
             gggAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGAc                                                                            <  2:9386595/93‑1 (MQ=255)
               gagaAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCg                                                                          <  2:7503102/93‑1 (MQ=255)
               gagaAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCg                                                                          >  2:8573495/1‑93 (MQ=255)
                agaagaGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGt                                                                         <  2:7685403/93‑1 (MQ=255)
                agaagaGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGt                                                                         >  2:5073522/1‑93 (MQ=255)
                  aagaGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGc                                                                       >  2:7944607/1‑93 (MQ=255)
                  aagaGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGc                                                                       >  1:8372714/1‑93 (MQ=255)
                  aagaGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCACTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGc                                                                       >  1:3664561/1‑93 (MQ=255)
                    gagaTTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTg                                                                     <  1:3704043/93‑1 (MQ=255)
                      gaTTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGa                                                                   >  2:4053019/1‑93 (MQ=255)
                      gaTTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGa                                                                   >  2:3676893/1‑93 (MQ=255)
                      gaTTCAGGCGAGTCACAACCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGa                                                                   >  1:1405693/1‑93 (MQ=255)
                       aTTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAGGAATTGACCGTGCTGGaa                                                                  >  2:5915582/1‑93 (MQ=255)
                        ttCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGaaa                                                                 >  1:7440967/1‑93 (MQ=255)
                        ttCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGaaa                                                                 <  2:2705263/93‑1 (MQ=255)
                        ttCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGaaa                                                                 <  2:957643/93‑1 (MQ=255)
                         tCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGaaaa                                                                <  1:5886392/93‑1 (MQ=255)
                            ggCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAatat                                                             <  1:9581078/93‑1 (MQ=255)
                             gCGATTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATc                                                            <  1:2662841/93‑1 (MQ=255)
                              cGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCt                                                           <  1:2395914/93‑1 (MQ=255)
                               gAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCtt                                                          >  1:6257663/1‑93 (MQ=255)
                               gAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCtt                                                          >  2:9754087/1‑93 (MQ=255)
                                aGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTTACCGTGCTGGAAAATATCTTc                                                         <  2:2588154/93‑1 (MQ=255)
                                aGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTc                                                         <  1:1563130/93‑1 (MQ=255)
                                 gTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTcc                                                        <  1:1071018/93‑1 (MQ=255)
                                 gTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTcc                                                        <  1:4224185/93‑1 (MQ=255)
                                  tCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCt                                                       <  2:7291268/93‑1 (MQ=255)
                                    acaTCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTgg                                                     <  1:2161579/93‑1 (MQ=255)
                                    acaTCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTgg                                                     >  1:4286742/1‑93 (MQ=255)
                                       tCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTa                                                  >  2:7050285/1‑93 (MQ=255)
                                           cgATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGa                                              <  1:5358225/93‑1 (MQ=255)
                                            gATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGaa                                             >  2:2829289/1‑93 (MQ=255)
                                             aTACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGaaa                                            <  2:8034479/93‑1 (MQ=255)
                                             aTACCGAACGCAAAGGTATAGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGaaa                                            >  2:3114842/1‑93 (MQ=255)
                                              tACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAAt                                           >  2:1264706/1‑93 (MQ=255)
                                               aCCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATa                                          <  1:334771/93‑1 (MQ=255)
                                                ccGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATaa                                         >  2:3323587/1‑93 (MQ=255)
                                                 cGAACGCAAAGTTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAAc                                        <  1:7544429/93‑1 (MQ=255)
                                                   aaCGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAAccc                                      <  2:1651802/93‑1 (MQ=255)
                                                    aCGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCca                                     <  1:8964698/93‑1 (MQ=255)
                                                    aCGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCca                                     <  2:8459777/93‑1 (MQ=255)
                                                     cGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCcac                                    <  2:4834165/93‑1 (MQ=255)
                                                      gCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCcaca                                   >  1:10036449/1‑93 (MQ=255)
                                                       cAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACaa                                  <  1:4060002/93‑1 (MQ=255)
                                                       cAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACaa                                  <  2:395851/93‑1 (MQ=255)
                                                       cAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACaa                                  >  2:8367697/1‑93 (MQ=255)
                                                       cAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACaa                                  <  1:8030340/93‑1 (MQ=255)
                                                       cAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACaa                                  <  2:9668112/93‑1 (MQ=255)
                                                         aaGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATg                                <  1:6430580/93‑1 (MQ=255)
                                                         aaGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATg                                <  2:1536120/93‑1 (MQ=255)
                                                            gTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCa                             >  2:3223208/1‑93 (MQ=255)
                                                            gTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCa                             >  2:5464111/1‑93 (MQ=255)
                                                             tATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCAt                            <  1:6079648/93‑1 (MQ=255)
                                                              aTCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCAtt                           <  2:7748472/93‑1 (MQ=255)
                                                              aTCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCAtt                           <  1:1262506/93‑1 (MQ=255)
                                                               tCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTa                          >  1:9186913/1‑93 (MQ=255)
                                                                cGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTAt                         <  1:3003932/93‑1 (MQ=255)
                                                                cGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTAt                         <  1:2555923/93‑1 (MQ=255)
                                                                 gCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATg                        <  2:5748153/93‑1 (MQ=255)
                                                                 gCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATg                        <  2:3441084/93‑1 (MQ=255)
                                                                    atcatTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGAt                     >  1:3104956/1‑93 (MQ=255)
                                                                    atcatTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGAt                     >  1:1885866/1‑93 (MQ=255)
                                                                      cattcatCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTa                   <  1:4519946/93‑1 (MQ=255)
                                                                      cattcatCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTa                   <  1:9778866/93‑1 (MQ=255)
                                                                      cattcatCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTa                   <  2:43897/93‑1 (MQ=255)
                                                                      cattcatCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTa                   <  2:7162302/93‑1 (MQ=255)
                                                                        ttcatCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATg                 <  1:6340349/93‑1 (MQ=255)
                                                                        ttcatCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCAACAATGGCATTATGGATTATg                 >  1:8491983/1‑93 (MQ=255)
                                                                            tcaGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCt             <  1:1699595/93‑1 (MQ=255)
                                                                            tcaGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCt             >  2:1926200/1‑93 (MQ=255)
                                                                            tcaGGAATTGGCCCCGGGGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCAGTATGGATTATGACCt             >  2:8973070/1‑93 (MQ=255)
                                                                              aGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCtga           <  2:135395/93‑1 (MQ=255)
                                                                              aGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCtga           <  2:6844899/93‑1 (MQ=255)
                                                                              aGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCtga           <  2:2188662/93‑1 (MQ=255)
                                                                               ggAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCtgat          <  1:7256647/93‑1 (MQ=255)
                                                                               ggAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCtgat          <  2:8196881/93‑1 (MQ=255)
                                                                               ggAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCtgat          <  1:7178295/93‑1 (MQ=255)
                                                                                 aaTTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCtgatga        <  2:8757092/93‑1 (MQ=255)
                                                                                 aaTTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCtgatga        <  1:4743874/93‑1 (MQ=255)
                                                                                 aaTTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCtgatga        >  2:10046671/1‑93 (MQ=255)
                                                                                 aaTTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCtgatga        >  1:8778366/1‑93 (MQ=255)
                                                                                  aTTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGac       >  1:7046609/1‑93 (MQ=255)
                                                                                    tGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGacgc     <  1:3488828/93‑1 (MQ=255)
                                                                                      gCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGacgcta   <  1:568036/93‑1 (MQ=255)
                                                                                      gCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGacgcta   <  1:6603998/93‑1 (MQ=255)
                                                                                       ccccGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGacgctac  <  2:5619481/93‑1 (MQ=255)
                                                                                          |                                                                                         
AAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTAC  >  NC_000913/3730014‑3730193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 367 total aligned reads displayed.
CGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGCTG  >  NC_000913/3730012‑3730197
                                                                                            |                                                                                             
CGAAATTATTTTTGCGGGAGAAGAGGTTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGCCCCCG                                                                                              >  SRR4302540.3058971/1‑94 (MQ=60)
CGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCG                                                                                              <  SRR4302540.8739751/94‑1 (MQ=60)
CGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCG                                                                                              >  SRR4302540.995503/1‑94 (MQ=60)
 GAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGG                                                                                             >  SRR4302540.2117978/1‑94 (MQ=60)
  AAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGT                                                                                            <  SRR4302540.9913955/94‑1 (MQ=60)
  AAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGT                                                                                            >  SRR4302540.4640766/1‑94 (MQ=60)
   AATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTG                                                                                           >  SRR4302540.1295110/1‑94 (MQ=60)
    ATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGA                                                                                          >  SRR4302540.7701393/1‑94 (MQ=60)
    ATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGA                                                                                          >  SRR4302540.6248076/1‑94 (MQ=60)
    ATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTCA                                                                                          >  SRR4302540.795088/1‑94 (MQ=60)
     TTATTTTTGGGGGAGAAGCGATGCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAA                                                                                         <  SRR4302540.54917/94‑1 (MQ=60)
       ATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAG                                                                                       >  SRR4302540.643597/1‑94 (MQ=60)
       ATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAG                                                                                       <  SRR4302540.9514175/94‑1 (MQ=60)
       ATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAG                                                                                       >  SRR4302540.5059289/1‑94 (MQ=60)
        TTTTTGCGGGAGAAGAGATTCAGGCGAGGCACATCCGCGATACCGAACGCAAAGGAATCGCCATCATTCATCAGGAATTGGCGCCGGTGAAAGA                                                                                      >  SRR4302540.1899681/1‑94 (MQ=60)
         TTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAA                                                                                     <  SRR4302540.55956/94‑1 (MQ=60)
          TTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAGAGAAT                                                                                    >  SRR4302540.4725763/1‑94 (MQ=60)
          TTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAAT                                                                                    >  SRR4302540.6206146/1‑94 (MQ=60)
          TTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAAT                                                                                    <  SRR4302540.8509427/94‑1 (MQ=60)
          TTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAAT                                                                                    <  SRR4302540.7678062/94‑1 (MQ=60)
           TTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATT                                                                                   >  SRR4302540.1049538/1‑94 (MQ=60)
             GCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGA                                                                                 >  SRR4302540.7068062/1‑94 (MQ=60)
             GCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGA                                                                                 <  SRR4302540.309536/94‑1 (MQ=60)
              CGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCAGCAGGAATTGGCCCCGGTGAAAGAATTGAC                                                                                <  SRR4302540.6836390/94‑1 (MQ=60)
               GTGAGAAGAGATTCAGGCGAGTCACATCCGCCATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACC                                                                               <  SRR4302540.3622158/94‑1 (MQ=60)
               GGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACC                                                                               <  SRR4302540.7986150/94‑1 (MQ=60)
                 GAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCAATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGT                                                                             <  SRR4302540.7300823/94‑1 (MQ=60)
                  AGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTG                                                                            <  SRR4302540.302519/94‑1 (MQ=60)
                  AGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACAGTG                                                                            >  SRR4302540.5378229/1‑94 (MQ=60)
                   GAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGC                                                                           >  SRR4302540.10057368/1‑94 (MQ=60)
                   GAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGC                                                                           >  SRR4302540.8469883/1‑94 (MQ=60)
                   GAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCACTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGC                                                                           >  SRR4302540.3704670/1‑94 (MQ=60)
                   GAAGAGATTCAGGCGAGACACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGC                                                                           >  SRR4302540.7333423/1‑94 (MQ=60)
                     AGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTG                                                                         <  SRR4302540.8179952/94‑1 (MQ=60)
                      GAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGG                                                                        <  SRR4302540.3744480/94‑1 (MQ=60)
                       AGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGA                                                                       >  SRR4302540.6039621/1‑94 (MQ=60)
                       AGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGA                                                                       <  SRR4302540.5671927/94‑1 (MQ=60)
                       AGATTCAGGCGAGTCACAACCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGA                                                                       >  SRR4302540.1420830/1‑94 (MQ=60)
                         ATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAA                                                                     >  SRR4302540.7523872/1‑94 (MQ=60)
                         ATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAA                                                                     >  SRR4302540.2293040/1‑94 (MQ=60)
                           TCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAAT                                                                   <  SRR4302540.5951421/94‑1 (MQ=60)
                             AGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATAT                                                                 >  SRR4302540.1297301/1‑94 (MQ=60)
                             AGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATAT                                                                 >  SRR4302540.2459991/1‑94 (MQ=60)
                             AGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATAT                                                                 >  SRR4302540.5439197/1‑94 (MQ=60)
                              GGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATC                                                                <  SRR4302540.9694216/94‑1 (MQ=60)
                               GCGATTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCT                                                               <  SRR4302540.2691723/94‑1 (MQ=60)
                               GCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGATTTGACCGTGCTGGAAAATATCT                                                               <  SRR4302540.7223795/94‑1 (MQ=60)
                               GCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCT                                                               <  SRR4302540.8404612/94‑1 (MQ=60)
                               GCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCT                                                               <  SRR4302540.2552129/94‑1 (MQ=60)
                                CGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTT                                                              >  SRR4302540.6327292/1‑94 (MQ=60)
                                CGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTT                                                              <  SRR4302540.2421732/94‑1 (MQ=60)
                                CGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTT                                                              <  SRR4302540.9118069/94‑1 (MQ=60)
                                  AGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCC                                                            <  SRR4302540.4172480/94‑1 (MQ=60)
                                  AGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCC                                                            >  SRR4302540.307766/1‑94 (MQ=60)
                                  AGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCC                                                            <  SRR4302540.1580289/94‑1 (MQ=60)
                                  AGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCC                                                            <  SRR4302540.4281605/94‑1 (MQ=60)
                                  AGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCC                                                            <  SRR4302540.1607649/94‑1 (MQ=60)
                                  AGTCACATCCGCGATACCGAACCCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCC                                                            <  SRR4302540.7606358/94‑1 (MQ=60)
                                   GTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCT                                                           >  SRR4302540.927989/1‑94 (MQ=60)
                                   GTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCT                                                           <  SRR4302540.7697889/94‑1 (MQ=60)
                                   GTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCT                                                           <  SRR4302540.4270166/94‑1 (MQ=60)
                                   GTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCT                                                           <  SRR4302540.4283193/94‑1 (MQ=60)
                                   GTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCT                                                           >  SRR4302540.2641130/1‑94 (MQ=60)
                                   GTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCT                                                           >  SRR4302540.7578092/1‑94 (MQ=60)
                                   GTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCT                                                           >  SRR4302540.1018009/1‑94 (MQ=60)
                                    TCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTG                                                          <  SRR4302540.7442285/94‑1 (MQ=60)
                                    TCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTG                                                          >  SRR4302540.6621199/1‑94 (MQ=60)
                                    TCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTG                                                          <  SRR4302540.613812/94‑1 (MQ=60)
                                    TCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTG                                                          <  SRR4302540.3440666/94‑1 (MQ=60)
                                     CACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGG                                                         <  SRR4302540.274029/94‑1 (MQ=60)
                                     CACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGG                                                         >  SRR4302540.4333372/1‑94 (MQ=60)
                                      ACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGG                                                        <  SRR4302540.3022050/94‑1 (MQ=60)
                                      ACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGG                                                        <  SRR4302540.4881677/94‑1 (MQ=60)
                                      ACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGG                                                        <  SRR4302540.2184861/94‑1 (MQ=60)
                                      ACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGG                                                        >  SRR4302540.6922842/1‑94 (MQ=60)
                                        ATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTA                                                      >  SRR4302540.6483902/1‑94 (MQ=60)
                                        ATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTA                                                      <  SRR4302540.9806464/94‑1 (MQ=60)
                                        ATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTA                                                      >  SRR4302540.637589/1‑94 (MQ=60)
                                        ATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTA                                                      >  SRR4302540.1401730/1‑94 (MQ=60)
                                        ATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTA                                                      >  SRR4302540.3568058/1‑94 (MQ=60)
                                         TCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAA                                                     >  SRR4302540.2439838/1‑94 (MQ=60)
                                          CCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAAC                                                    <  SRR4302540.4257732/94‑1 (MQ=60)
                                          CCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAAC                                                    >  SRR4302540.7846858/1‑94 (MQ=60)
                                           CGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGCATTGACCGTGCTGGAAAATATCTTCCTGGGTAACG                                                   >  SRR4302540.1206119/1‑94 (MQ=60)
                                           CGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACG                                                   >  SRR4302540.5141864/1‑94 (MQ=60)
                                           CGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACG                                                   <  SRR4302540.9749657/94‑1 (MQ=60)
                                           CGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTAGGTAACG                                                   >  SRR4302540.3104370/1‑94 (MQ=60)
                                            GCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGA                                                  >  SRR4302540.5821925/1‑94 (MQ=60)
                                            GCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGA                                                  >  SRR4302540.7521498/1‑94 (MQ=60)
                                             CGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAA                                                 <  SRR4302540.5417066/94‑1 (MQ=60)
                                              GATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAA                                                >  SRR4302540.3985837/1‑94 (MQ=60)
                                              GATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAA                                                >  SRR4302540.4728962/1‑94 (MQ=60)
                                                TACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATA                                              <  SRR4302540.7321237/94‑1 (MQ=60)
                                                TACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATA                                              <  SRR4302540.3165155/94‑1 (MQ=60)
                                                TACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATA                                              >  SRR4302540.8695390/1‑94 (MQ=60)
                                                TACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATA                                              <  SRR4302540.451490/94‑1 (MQ=60)
                                                TACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATA                                              <  SRR4302540.905941/94‑1 (MQ=60)
                                                 ACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAA                                             >  SRR4302540.1519313/1‑94 (MQ=60)
                                                 ACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAA                                             <  SRR4302540.338136/94‑1 (MQ=60)
                                                 ACCGAACGCAAAGGTATCGACATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAA                                             <  SRR4302540.4287852/94‑1 (MQ=60)
                                                   CGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACC                                           >  SRR4302540.7406371/1‑94 (MQ=60)
                                                   CGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACC                                           <  SRR4302540.327415/94‑1 (MQ=60)
                                                    GAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCC                                          <  SRR4302540.6734730/94‑1 (MQ=60)
                                                    GAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCC                                          <  SRR4302540.9199966/94‑1 (MQ=60)
                                                     AACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCA                                         <  SRR4302540.4152139/94‑1 (MQ=60)
                                                     AACGCAAAGGTATCGCCATCATTCATAAGGAATTGGCACCGGTGACAGAATTGACCGTGCTGGAAAAGATCTTCCTCGGCAAGAAAATAACCCA                                         >  SRR4302540.9393790/1‑94 (MQ=57)
                                                      ACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCAC                                        <  SRR4302540.6095902/94‑1 (MQ=60)
                                                      ACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCAC                                        >  SRR4302540.3459029/1‑94 (MQ=60)
                                                      ACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCAC                                        <  SRR4302540.8491449/94‑1 (MQ=60)
                                                       CGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACA                                       >  SRR4302540.10153167/1‑94 (MQ=60)
                                                       CGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACA                                       >  SRR4302540.4198821/1‑94 (MQ=60)
                                                       CGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACA                                       >  SRR4302540.1070775/1‑94 (MQ=60)
                                                       CGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACA                                       <  SRR4302540.2731725/94‑1 (MQ=60)
                                                       CGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACA                                       <  SRR4302540.1906248/94‑1 (MQ=60)
                                                        GCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAA                                      <  SRR4302540.3257772/94‑1 (MQ=60)
                                                         CAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAAT                                     <  SRR4302540.9760098/94‑1 (MQ=60)
                                                         CAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAAT                                     <  SRR4302540.8123707/94‑1 (MQ=60)
                                                         CAAAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAAT                                     <  SRR4302540.2010066/94‑1 (MQ=60)
                                                           AAGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGG                                   <  SRR4302540.7185727/94‑1 (MQ=60)
                                                            AGGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGC                                  >  SRR4302540.5553341/1‑94 (MQ=60)
                                                             GGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCA                                 <  SRR4302540.5758861/94‑1 (MQ=60)
                                                             GGTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCA                                 >  SRR4302540.1187635/1‑94 (MQ=60)
                                                              GTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCAT                                <  SRR4302540.5792395/94‑1 (MQ=60)
                                                              GTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCAT                                >  SRR4302540.7545020/1‑94 (MQ=60)
                                                              GTATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCAT                                <  SRR4302540.3547322/94‑1 (MQ=60)
                                                               TATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATT                               <  SRR4302540.6147253/94‑1 (MQ=60)
                                                               TATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATT                               >  SRR4302540.6928417/1‑94 (MQ=60)
                                                                ATCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTA                              >  SRR4302540.451612/1‑94 (MQ=60)
                                                                 TCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTAT                             <  SRR4302540.1669236/94‑1 (MQ=60)
                                                                 TCGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTAT                             <  SRR4302540.6405125/94‑1 (MQ=60)
                                                                  CGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATG                            >  SRR4302540.4872714/1‑94 (MQ=60)
                                                                  CGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATG                            <  SRR4302540.1677604/94‑1 (MQ=60)
                                                                  CGCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATG                            <  SRR4302540.2583459/94‑1 (MQ=60)
                                                                   GCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGG                           <  SRR4302540.5473377/94‑1 (MQ=60)
                                                                   GCCATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGA                           >  SRR4302540.6647359/1‑94 (MQ=60)
                                                                     CATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGAT                         >  SRR4302540.642308/1‑94 (MQ=60)
                                                                     CATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGAT                         >  SRR4302540.2258559/1‑94 (MQ=60)
                                                                      ATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATT                        >  SRR4302540.2843198/1‑94 (MQ=60)
                                                                      ATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATT                        <  SRR4302540.2774645/94‑1 (MQ=60)
                                                                      ATCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATT                        <  SRR4302540.2589641/94‑1 (MQ=60)
                                                                       TCATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTA                       <  SRR4302540.7328806/94‑1 (MQ=60)
                                                                        CATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTAT                      <  SRR4302540.936816/94‑1 (MQ=60)
                                                                        CATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTAT                      <  SRR4302540.4568897/94‑1 (MQ=60)
                                                                        CATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTAT                      <  SRR4302540.9893489/94‑1 (MQ=60)
                                                                        CATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTAT                      <  SRR4302540.2403184/94‑1 (MQ=60)
                                                                        CATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTAT                      <  SRR4302540.2964669/94‑1 (MQ=60)
                                                                        CATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTAT                      <  SRR4302540.4184473/94‑1 (MQ=60)
                                                                         CTTCATCAGGAATTGGCCCCGGTGAAATAATTGACCCTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATG                     <  SRR4302540.3462992/94‑1 (MQ=60)
                                                                         ATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATG                     <  SRR4302540.6150478/94‑1 (MQ=60)
                                                                         ATTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCAACAATGGCATTATGGATTATG                     >  SRR4302540.8590653/1‑94 (MQ=60)
                                                                         ATTCATCAGGAATTGGCCCCGGCGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATG                     <  SRR4302540.2614416/94‑1 (MQ=60)
                                                                          TTCATCAGGGATTTGCCCCGGTGAAAGAATTGACCGTGCGGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGA                    <  SRR4302540.8558182/94‑1 (MQ=60)
                                                                          TTCATCAGGAATTGGCCCCGGTGAAAGAATTGCCCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGA                    <  SRR4302540.7140286/94‑1 (MQ=60)
                                                                          TTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGA                    >  SRR4302540.4218072/1‑94 (MQ=60)
                                                                          TTCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGA                    <  SRR4302540.6410959/94‑1 (MQ=60)
                                                                          TTCAGCAGGAACTGGCCCCGGNGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGA                    <  SRR4302540.14779/94‑1 (MQ=60)
                                                                           TCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGAC                   <  SRR4302540.3921402/94‑1 (MQ=60)
                                                                           TCATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGAC                   <  SRR4302540.8631455/94‑1 (MQ=60)
                                                                            CATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACC                  >  SRR4302540.6389182/1‑94 (MQ=60)
                                                                            CATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACC                  <  SRR4302540.3718007/94‑1 (MQ=60)
                                                                             ATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGGAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCT                 >  SRR4302540.198334/1‑94 (MQ=60)
                                                                             ATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCT                 <  SRR4302540.8314209/94‑1 (MQ=60)
                                                                             ATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCT                 <  SRR4302540.5309401/94‑1 (MQ=60)
                                                                             ATCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCT                 >  SRR4302540.5430172/1‑94 (MQ=60)
                                                                              TCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTG                >  SRR4302540.4143203/1‑94 (MQ=60)
                                                                              TCAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTG                <  SRR4302540.1718001/94‑1 (MQ=60)
                                                                               CAGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGA               >  SRR4302540.9049283/1‑94 (MQ=60)
                                                                                AGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGAT              <  SRR4302540.6781917/94‑1 (MQ=60)
                                                                                AGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGAT              >  SRR4302540.6546757/1‑94 (MQ=60)
                                                                                AGGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGAT              <  SRR4302540.6781913/94‑1 (MQ=60)
                                                                                 GGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATG             >  SRR4302540.915416/1‑94 (MQ=60)
                                                                                 GGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATG             >  SRR4302540.17976/1‑94 (MQ=60)
                                                                                 GGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATG             >  SRR4302540.8889859/1‑94 (MQ=60)
                                                                                 GGAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATG             >  SRR4302540.7389756/1‑94 (MQ=60)
                                                                                  GAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGA            >  SRR4302540.3791020/1‑94 (MQ=60)
                                                                                  GAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGA            >  SRR4302540.8880021/1‑94 (MQ=60)
                                                                                  GAATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGA            <  SRR4302540.439186/94‑1 (MQ=60)
                                                                                   AATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGAC           >  SRR4302540.7124969/1‑94 (MQ=60)
                                                                                   AATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGAC           <  SRR4302540.4794497/94‑1 (MQ=60)
                                                                                   AATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGAC           <  SRR4302540.8942984/94‑1 (MQ=60)
                                                                                    ATTGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACG          <  SRR4302540.1421305/94‑1 (MQ=60)
                                                                                     TTGGCGCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGC         <  SRR4302540.3729167/94‑1 (MQ=60)
                                                                                      TGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCT        <  SRR4302540.3526823/94‑1 (MQ=60)
                                                                                      TGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCT        <  SRR4302540.4819199/94‑1 (MQ=60)
                                                                                      TGGCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCT        <  SRR4302540.1095604/94‑1 (MQ=60)
                                                                                        GCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTAC      <  SRR4302540.7718263/94‑1 (MQ=60)
                                                                                        GCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTAC      <  SRR4302540.574208/94‑1 (MQ=60)
                                                                                        GCCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTAC      <  SRR4302540.6677127/94‑1 (MQ=60)
                                                                                         CCCCGGTGAAAGAATTGCCCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATaacatgacgacgctagc     >  SRR4302540.3514237/1‑77 (MQ=60)
                                                                                         CCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACG     <  SRR4302540.1225042/94‑1 (MQ=60)
                                                                                         CCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACG     >  SRR4302540.2927294/1‑94 (MQ=60)
                                                                                         CCCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACG     >  SRR4302540.2817341/1‑94 (MQ=60)
                                                                                          CCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGC    >  SRR4302540.3793907/1‑94 (MQ=60)
                                                                                          CCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGC    >  SRR4302540.3186262/1‑94 (MQ=60)
                                                                                          CCCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGC    >  SRR4302540.6589878/1‑94 (MQ=60)
                                                                                           CCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGCT   >  SRR4302540.4945921/1‑94 (MQ=60)
                                                                                           CCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGCT   <  SRR4302540.2003558/94‑1 (MQ=60)
                                                                                           CCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGCT   <  SRR4302540.6980325/94‑1 (MQ=60)
                                                                                           CCGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGCT   <  SRR4302540.372828/94‑1 (MQ=60)
                                                                                            CGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGCTG  <  SRR4302540.5041784/94‑1 (MQ=60)
                                                                                            |                                                                                             
CGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGCTG  >  NC_000913/3730012‑3730197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑