Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,739,740	A→G	M141T (ATG→ACG)	yiaJ ←	putative regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,739,740	0	A	G	99.8%	1403.2 / ‑6.0	437	M141T (ATG→ACG)	yiaJ	putative regulator
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (224/212); total (224/213)
Fisher's exact test for biased strand distribution p-value = 4.87e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

Only 100 of 459 total aligned reads displayed.

TAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC  >  NC_000913/3739650‑3739829

tAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTc                                                                                         <  1:3657168/93‑1 (MQ=255)

 aGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTcc                                                                                        <  1:417324/93‑1 (MQ=255)

  gTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTccc                                                                                       <  2:1115611/93‑1 (MQ=255)

   tCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCg                                                                                      >  1:6345087/1‑93 (MQ=255)

     cGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGt                                                                                    <  2:6607804/93‑1 (MQ=255)

      gggTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGtt                                                                                   <  2:5821103/93‑1 (MQ=255)

      gggTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGtt                                                                                   <  2:8641690/93‑1 (MQ=255)

       ggTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtg                                                                                  >  2:5291398/1‑93 (MQ=255)

        gTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtgt                                                                                 <  1:3929143/93‑1 (MQ=255)

         tGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTtgtg                                                                                <  2:8327257/93‑1 (MQ=255)

          gACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTgg                                                                               >  1:554535/1‑93 (MQ=255)

          gACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTgg                                                                               <  1:81627/93‑1 (MQ=255)

           aCCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTggg                                                                              >  1:6798489/1‑93 (MQ=255)

            ccAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGt                                                                             <  2:5230863/93‑1 (MQ=255)

              aaaCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTc                                                                           >  2:4914503/1‑93 (MQ=255)

               aaCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTcc                                                                          >  1:2161017/1‑93 (MQ=255)

                aCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCa                                                                         <  2:9080751/93‑1 (MQ=255)

                aCGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCa                                                                         <  1:1301698/93‑1 (MQ=255)

                aCGCCATGTAGAGCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCa                                                                         <  2:5957794/93‑1 (MQ=255)

                 cGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAg                                                                        <  1:2699636/93‑1 (MQ=255)

                 cGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAg                                                                        >  2:10008189/1‑93 (MQ=255)

                  gCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGc                                                                       >  2:6458107/1‑93 (MQ=255)

                  gCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGc                                                                       >  2:8766358/1‑93 (MQ=255)

                  gCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGc                                                                       >  2:4645111/1‑93 (MQ=255)

                   ccATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGCTCCAGCt                                                                      >  2:5516188/1‑93 (MQ=255)

                     aTGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTta                                                                    >  1:247634/1‑93 (MQ=255)

                      tGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTGCCGGTTGTGGGATCCAGCTtat                                                                   >  2:7019459/1‑93 (MQ=255)

                      tGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtat                                                                   >  1:9139000/1‑93 (MQ=255)

                      tGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtat                                                                   >  1:5134375/1‑93 (MQ=255)

                      tGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtat                                                                   >  1:4370952/1‑93 (MQ=255)

                      tGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtat                                                                   >  2:3579445/1‑93 (MQ=255)

                      tGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtat                                                                   >  1:800867/1‑93 (MQ=255)

                       gTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTtata                                                                  >  1:6174884/1‑93 (MQ=255)

                        tAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGGTCGCAGCGTCCCGGTTGTGGGGTCCAGCTTCTaa                                                                 >  1:7564923/1‑93 (MQ=255)

                         aGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATaaa                                                                >  1:693669/1‑93 (MQ=255)

                           agcgtGCCCATTGTGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATc                                                              <  2:8086626/89‑1 (MQ=255)

                           aTCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATc                                                              >  2:2765944/1‑93 (MQ=255)

                           aTCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATc                                                              <  2:5599539/93‑1 (MQ=255)

                              ttGCCGATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCaaa                                                           <  2:2926584/93‑1 (MQ=255)

                              ttGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCaaa                                                           >  1:3313432/1‑93 (MQ=255)

                                gCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAAt                                                         <  2:3053669/93‑1 (MQ=255)

                                gCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAAt                                                         <  1:9003575/93‑1 (MQ=255)

                                gCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAAt                                                         <  1:422295/93‑1 (MQ=255)

                                 cccATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATa                                                        >  1:9458250/1‑93 (MQ=255)

                                 cccATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATa                                                        <  1:34110/93‑1 (MQ=255)

                                  ccATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAg                                                       <  2:3316803/93‑1 (MQ=255)

                                   cATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGc                                                      <  2:6899722/93‑1 (MQ=255)

                                     ttGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGt                                                    <  1:1224260/93‑1 (MQ=255)

                                     ttGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGt                                                    >  2:201340/1‑93 (MQ=255)

                                     ttGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGt                                                    >  1:654868/1‑93 (MQ=255)

                                     ttGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGt                                                    >  1:6684490/1‑93 (MQ=255)

                                      tGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTg                                                   >  2:6045530/1‑93 (MQ=255)

                                        cGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGAt                                                 <  1:1665497/93‑1 (MQ=255)

                                          gAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCg                                               >  2:7427583/1‑93 (MQ=255)

                                           aaCAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGt                                              >  2:9620337/1‑93 (MQ=255)

                                            aCAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTc                                             >  2:2700487/1‑93 (MQ=255)

                                               gTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTc                                          >  1:4791883/1‑93 (MQ=255)

                                                 agagCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTcgc                                        <  2:2484627/93‑1 (MQ=255)

                                                    gCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGc                                     >  2:3880751/1‑93 (MQ=255)

                                                      ggCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTg                                   <  1:2813131/93‑1 (MQ=255)

                                                      ggCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTg                                   >  2:1945574/1‑93 (MQ=255)

                                                      ggCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTg                                   <  2:4566296/93‑1 (MQ=255)

                                                       gCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTgg                                  <  2:7825324/93‑1 (MQ=255)

                                                        cATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGga                                 <  2:1846162/93‑1 (MQ=255)

                                                        cATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTACCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGga                                 <  2:7940821/93‑1 (MQ=255)

                                                         atatGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTgggg                                >  1:1404122/1‑91 (MQ=255)

                                                          tatGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGgcga                               >  1:6903188/1‑93 (MQ=255)

                                                          tatGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGgaga                               >  2:3729341/1‑93 (MQ=255)

                                                            tGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAg                             <  1:8856937/93‑1 (MQ=255)

                                                              cTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGtt                           >  2:6217766/1‑93 (MQ=255)

                                                              cTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGtt                           <  1:9358192/93‑1 (MQ=255)

                                                               tGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTa                          <  2:2858831/93‑1 (MQ=255)

                                                               tGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTa                          <  2:1617889/93‑1 (MQ=255)

                                                                ggCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCGAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTaa                         <  1:1052493/93‑1 (MQ=255)

                                                                ggCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTaa                         <  1:1589986/93‑1 (MQ=255)

                                                                 gCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAt                        >  1:2997849/1‑93 (MQ=255)

                                                                  ccAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGCAGTTAATg                       >  1:4504126/1‑93 (MQ=255)

                                                                  ccAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATg                       <  2:9423689/93‑1 (MQ=255)

                                                                   cAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATgg                      >  2:2258999/1‑93 (MQ=255)

                                                                    aaTATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGt                     >  2:2343990/1‑93 (MQ=255)

                                                                      tataGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGttt                   >  2:6725029/1‑93 (MQ=255)

                                                                       ataGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGCAGTTAATGGTTTc                  >  2:1271406/1‑93 (MQ=255)

                                                                       ataGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTc                  <  2:4239013/93‑1 (MQ=255)

                                                                       ataGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGGTTc                  >  2:7239550/1‑93 (MQ=255)

                                                                        tgggCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCa                 <  1:869141/91‑1 (MQ=255)

                                                                        taGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCa                 <  2:9837929/93‑1 (MQ=255)

                                                                        taGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCa                 <  2:6344029/93‑1 (MQ=255)

                                                                         aGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCAc                <  1:5993451/93‑1 (MQ=255)

                                                                          ggCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCAcc               <  1:7865039/93‑1 (MQ=255)

                                                                          ggCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCAcc               <  2:5676520/93‑1 (MQ=255)

                                                                            cACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAg             <  2:3161209/93‑1 (MQ=255)

                                                                             aCGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGt            <  2:4007973/93‑1 (MQ=255)

                                                                              cGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTg           >  1:5262195/1‑93 (MQ=255)

                                                                              cGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTg           <  1:718314/93‑1 (MQ=255)

                                                                              cGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTg           >  1:3526443/1‑93 (MQ=255)

                                                                               gggTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTgg          <  1:7450020/93‑1 (MQ=255)

                                                                               gggTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTgg          <  2:4845297/93‑1 (MQ=255)

                                                                               gggTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTAATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTgg          <  1:9696502/93‑1 (MQ=255)

                                                                                  gtCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGa       <  2:8531691/92‑1 (MQ=255)

                                                                                     gcagcgTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGt    <  1:1950225/93‑1 (MQ=255)

TAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC  >  NC_000913/3739650‑3739829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 226 total aligned reads displayed.

ACGTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGTG  >  NC_000913/3739647‑3739833

ACGTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCG                                                                                               <  SRR4302540.9422880/94‑1 (MQ=60)

 CGTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGT                                                                                              <  SRR4302540.7389140/94‑1 (MQ=60)

   TAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCC                                                                                            <  SRR4302540.3697215/94‑1 (MQ=60)

    AGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCC                                                                                           <  SRR4302540.71156/94‑1 (MQ=60)

    AGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCC                                                                                           <  SRR4302540.3180631/94‑1 (MQ=60)

    AGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCC                                                                                           <  SRR4302540.421704/94‑1 (MQ=60)

     GTCCGTGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCG                                                                                          >  SRR4302540.10077666/1‑94 (MQ=60)

     GTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCG                                                                                          >  SRR4302540.6415741/1‑94 (MQ=60)

     GTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCG                                                                                          >  SRR4302540.5201456/1‑94 (MQ=60)

     GTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCG                                                                                          <  SRR4302540.1755825/94‑1 (MQ=60)

       CCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGT                                                                                        >  SRR4302540.4136481/1‑94 (MQ=60)

        CGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTT                                                                                       <  SRR4302540.8556665/94‑1 (MQ=60)

         GGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTG                                                                                      <  SRR4302540.6978480/94‑1 (MQ=60)

         GGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTG                                                                                      >  SRR4302540.2738562/1‑94 (MQ=60)

         GGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTG                                                                                      >  SRR4302540.868829/1‑94 (MQ=60)

          gcgGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGT                                                                                     <  SRR4302540.7961416/91‑1 (MQ=60)

          GGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGT                                                                                     <  SRR4302540.3650622/94‑1 (MQ=60)

           GTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTG                                                                                    <  SRR4302540.3971639/94‑1 (MQ=60)

           GTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTG                                                                                    >  SRR4302540.5594734/1‑94 (MQ=60)

           GTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTG                                                                                    >  SRR4302540.7273875/1‑94 (MQ=60)

           GTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTG                                                                                    <  SRR4302540.4896660/94‑1 (MQ=60)

            TGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGG                                                                                   >  SRR4302540.560584/1‑94 (MQ=60)

            TGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGG                                                                                   >  SRR4302540.3553018/1‑94 (MQ=60)

             GGCCAAACCCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGG                                                                                  <  SRR4302540.5599103/94‑1 (MQ=60)

             GACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGG                                                                                  >  SRR4302540.6873693/1‑94 (MQ=60)

             GACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGG                                                                                  >  SRR4302540.810860/1‑94 (MQ=60)

             GACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGG                                                                                  <  SRR4302540.82480/94‑1 (MQ=60)

              ACCAAACGCCCTGTAGATCTTGCCCATTGCAGCACAGTAGAGCCCCATATGCTGGCGAATATAGGCACGGGTTCGCAGCGGCCCGGTTGGGGGT                                                                                 <  SRR4302540.1045903/94‑1 (MQ=53)

               CCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTT                                                                                <  SRR4302540.7635349/94‑1 (MQ=60)

               CCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTT                                                                                >  SRR4302540.5232086/1‑94 (MQ=60)

                CAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTC                                                                               >  SRR4302540.5433671/1‑94 (MQ=60)

                 AAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCC                                                                              >  SRR4302540.2184287/1‑94 (MQ=60)

                   ACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAG                                                                            <  SRR4302540.1315193/94‑1 (MQ=60)

                   ACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAG                                                                            >  SRR4302540.1517723/1‑94 (MQ=60)

                    CGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGC                                                                           >  SRR4302540.6678636/1‑94 (MQ=60)

                    CGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGC                                                                           <  SRR4302540.2728774/94‑1 (MQ=60)

                      CCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTT                                                                         <  SRR4302540.9452726/94‑1 (MQ=60)

                      CCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTT                                                                         <  SRR4302540.903710/94‑1 (MQ=60)

                       CATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTA                                                                        >  SRR4302540.2815111/1‑94 (MQ=60)

                       CATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTA                                                                        >  SRR4302540.250030/1‑94 (MQ=60)

                        TTGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       <  SRR4302540.3460733/94‑1 (MQ=60)

                        ATGTAGATCTTGCCCATTGCGGAACCGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302540.7089106/1‑94 (MQ=60)

                        ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGTCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       <  SRR4302540.6314512/94‑1 (MQ=60)

                        ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302540.1364089/1‑94 (MQ=60)

                        ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302540.7089104/1‑94 (MQ=60)

                        ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302540.8934953/1‑94 (MQ=60)

                        ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302540.9248802/1‑94 (MQ=60)

                        ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302540.7628627/1‑94 (MQ=60)

                        ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302540.5189980/1‑94 (MQ=60)

                        ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302540.9647717/1‑94 (MQ=60)

                        ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302540.809375/1‑94 (MQ=60)

                        ATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTAT                                                                       >  SRR4302540.4418433/1‑94 (MQ=60)

                         TGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATA                                                                      >  SRR4302540.6243681/1‑94 (MQ=60)

                         TGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATA                                                                      >  SRR4302540.6243682/1‑94 (MQ=60)

                         TGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATA                                                                      >  SRR4302540.8859551/1‑94 (MQ=60)

                         TGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATA                                                                      >  SRR4302540.6837063/1‑94 (MQ=60)

                         TGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGACACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATA                                                                      <  SRR4302540.3518733/94‑1 (MQ=60)

                          GTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAA                                                                     >  SRR4302540.4227777/1‑94 (MQ=60)

                          GTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAA                                                                     <  SRR4302540.7469237/94‑1 (MQ=60)

                          GTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAA                                                                     >  SRR4302540.4227778/1‑94 (MQ=60)

                          GTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGGTCGCAGCGTCCCGGTTGTGGGGTCCAGCTTCTAA                                                                     >  SRR4302540.7649772/1‑94 (MQ=60)

                           TAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAA                                                                    >  SRR4302540.701104/1‑94 (MQ=60)

                            AGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAAT                                                                   <  SRR4302540.1622735/94‑1 (MQ=60)

                            AGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAAT                                                                   <  SRR4302540.906606/94‑1 (MQ=60)

                             GATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATC                                                                  >  SRR4302540.824153/1‑94 (MQ=60)

                              ATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCA                                                                 >  SRR4302540.2140992/1‑94 (MQ=60)

                              ATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCA                                                                 >  SRR4302540.3253384/1‑94 (MQ=60)

                               TCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAA                                                                <  SRR4302540.8810728/94‑1 (MQ=60)

                                CTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAA                                                               >  SRR4302540.3349739/1‑94 (MQ=60)

                                CTTGCACATTGCGGAACAGTAGAGATGCATATGCTCGCCAACATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCGGCTTATAAATCAAA                                                               <  SRR4302540.6948302/94‑1 (MQ=60)

                                 TTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAA                                                              >  SRR4302540.2927064/1‑94 (MQ=60)

                                 TTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAA                                                              >  SRR4302540.1075346/1‑94 (MQ=60)

                                  TGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAAT                                                             >  SRR4302540.6177690/1‑94 (MQ=60)

                                   GCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATA                                                            <  SRR4302540.9111592/94‑1 (MQ=60)

                                   GCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATA                                                            <  SRR4302540.426744/94‑1 (MQ=60)

                                   GCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATA                                                            >  SRR4302540.9570484/1‑94 (MQ=60)

                                    CCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAG                                                           >  SRR4302540.9285964/1‑94 (MQ=60)

                                    CCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAG                                                           <  SRR4302540.4447939/94‑1 (MQ=60)

                                    CCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAG                                                           <  SRR4302540.1603826/94‑1 (MQ=60)

                                    CCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAG                                                           <  SRR4302540.34474/94‑1 (MQ=60)

                                    CCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTACAGCTTATAAATCAAAATAG                                                           >  SRR4302540.9226679/1‑94 (MQ=60)

                                     CCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGC                                                          >  SRR4302540.9614129/1‑94 (MQ=60)

                                      CATTGCGGAACAGTAGAGCGGCATATGCGGGCCAATATAGGCACGGGTTCTCAGCGTCCCGGTTGTGGTTTCCAGCTTATAAATCAAAATAGCG                                                         <  SRR4302540.5381245/94‑1 (MQ=60)

                                       ATTTCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGT                                                        >  SRR4302540.169246/1‑94 (MQ=60)

                                       ATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGT                                                        >  SRR4302540.6758309/1‑94 (MQ=60)

                                       ATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGT                                                        >  SRR4302540.2903475/1‑94 (MQ=60)

                                       ATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGT                                                        >  SRR4302540.3954948/1‑94 (MQ=60)

                                       ATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGT                                                        >  SRR4302540.661845/1‑94 (MQ=60)

                                        TTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTG                                                       <  SRR4302540.4552942/94‑1 (MQ=60)

                                        TTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTG                                                       <  SRR4302540.3815834/94‑1 (MQ=60)

                                        TTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTG                                                       <  SRR4302540.1236780/94‑1 (MQ=60)

                                         TGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGA                                                      <  SRR4302540.9543397/94‑1 (MQ=60)

                                          GCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGAT                                                     <  SRR4302540.5905681/94‑1 (MQ=60)

                                           CGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATC                                                    <  SRR4302540.7774956/94‑1 (MQ=60)

                                           CGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATC                                                    >  SRR4302540.9818073/1‑94 (MQ=60)

                                           CGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATC                                                    <  SRR4302540.1077457/94‑1 (MQ=60)

                                           CGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATC                                                    >  SRR4302540.2713209/1‑94 (MQ=60)

                                           CGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATA                                                    <  SRR4302540.357560/94‑1 (MQ=60)

                                            GGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCG                                                   >  SRR4302540.8600305/1‑94 (MQ=60)

                                             GAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGT                                                  <  SRR4302540.7702550/94‑1 (MQ=60)

                                             GAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGT                                                  >  SRR4302540.2428600/1‑94 (MQ=60)

                                              AACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTC                                                 >  SRR4302540.10093580/1‑94 (MQ=60)

                                               ACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCT                                                >  SRR4302540.7772113/1‑94 (MQ=60)

                                               ACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCT                                                <  SRR4302540.6752010/94‑1 (MQ=60)

                                               ACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGGCCCGGTAGCGGGGTCCAGCTTATAAcgtaaaagaggcagatgggct                                                >  SRR4302540.584107/1‑73 (MQ=60)

                                                 AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC                                              >  SRR4302540.4843132/1‑94 (MQ=60)

                                                 AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC                                              <  SRR4302540.6469992/94‑1 (MQ=60)

                                                 AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC                                              <  SRR4302540.6469991/94‑1 (MQ=60)

                                                 AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC                                              <  SRR4302540.5269538/94‑1 (MQ=60)

                                                 AGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTC                                              >  SRR4302540.4843131/1‑94 (MQ=60)

                                                  GTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAANTNNAAATAGCGTGATNGTCTTgn                                             >  SRR4302540.2111181/1‑92 (MQ=60)

                                                      AGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGC                                         <  SRR4302540.1407831/94‑1 (MQ=60)

                                                      AGCGGCATATGCTGGCCAATATAGGCACGGGGTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGC                                         >  SRR4302540.2343625/1‑94 (MQ=60)

                                                       GCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCT                                        <  SRR4302540.1465458/94‑1 (MQ=60)

                                                        CGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTG                                       >  SRR4302540.675452/1‑94 (MQ=60)

                                                        CGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTG                                       >  SRR4302540.675451/1‑94 (MQ=60)

                                                         GGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGG                                      <  SRR4302540.2843510/94‑1 (MQ=60)

                                                         GGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGG                                      >  SRR4302540.4285138/1‑94 (MQ=60)

                                                          GCATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGA                                     <  SRR4302540.137738/94‑1 (MQ=60)

                                                           CATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGGG                                    >  SRR4302540.1419241/1‑94 (MQ=60)

                                                           CATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGGG                                    >  SRR4302540.1607967/1‑94 (MQ=60)

                                                           CATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAG                                    <  SRR4302540.7991431/94‑1 (MQ=60)

                                                            ATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCATAATAGCGTGATCGTCTTCGCGGCTGGAGG                                   >  SRR4302540.9603880/1‑94 (MQ=60)

                                                            ATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGCGA                                   >  SRR4302540.6979930/1‑94 (MQ=60)

                                                            ATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAcg                                   >  SRR4302540.9161348/1‑92 (MQ=60)

                                                            ATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGA                                   >  SRR4302540.8108223/1‑94 (MQ=60)

                                                            ATATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGA                                   >  SRR4302540.2631455/1‑94 (MQ=60)

                                                             TATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAA                                  <  SRR4302540.4480956/94‑1 (MQ=60)

                                                             TATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAA                                  >  SRR4302540.412637/1‑94 (MQ=60)

                                                             TATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAA                                  <  SRR4302540.1273313/94‑1 (MQ=60)

                                                             TATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAA                                  >  SRR4302540.7419905/1‑94 (MQ=60)

                                                             TATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAA                                  <  SRR4302540.9683019/94‑1 (MQ=60)

                                                              ATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAG                                 >  SRR4302540.6177749/1‑94 (MQ=60)

                                                              ATGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAG                                 <  SRR4302540.2754539/94‑1 (MQ=60)

                                                               TGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGT                                <  SRR4302540.8959416/94‑1 (MQ=60)

                                                               TGCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCATCGCGGCTGGAGAAGT                                <  SRR4302540.9439347/94‑1 (MQ=60)

                                                                GCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTT                               <  SRR4302540.4976748/94‑1 (MQ=60)

                                                                GCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTT                               <  SRR4302540.4877240/94‑1 (MQ=60)

                                                                GCTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTT                               <  SRR4302540.4418299/94‑1 (MQ=60)

                                                                 GTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTA                              <  SRR4302540.9469939/94‑1 (MQ=60)

                                                                 CTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTA                              >  SRR4302540.6382976/1‑94 (MQ=60)

                                                                 CTGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTA                              <  SRR4302540.9469643/94‑1 (MQ=60)

                                                                 CTGCCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTA                              <  SRR4302540.4224148/94‑1 (MQ=60)

                                                                  TGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAA                             >  SRR4302540.6459951/1‑94 (MQ=60)

                                                                  TGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAA                             >  SRR4302540.815004/1‑94 (MQ=60)

                                                                  TGGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAAACAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAA                             >  SRR4302540.6800179/1‑94 (MQ=60)

                                                                   GGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCGAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAT                            <  SRR4302540.1063204/94‑1 (MQ=60)

                                                                   GGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAT                            >  SRR4302540.3030879/1‑94 (MQ=60)

                                                                   GGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAT                            <  SRR4302540.1607352/94‑1 (MQ=60)

                                                                   GGCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAAT                            <  SRR4302540.4676644/94‑1 (MQ=60)

                                                                    GCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGCAGTTAATG                           >  SRR4302540.4552951/1‑94 (MQ=60)

                                                                    GCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATG                           <  SRR4302540.229236/94‑1 (MQ=60)

                                                                    GCCAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATG                           <  SRR4302540.46870/94‑1 (MQ=60)

                                                                      CAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGT                         >  SRR4302540.3620120/1‑94 (MQ=60)

                                                                      CAATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGT                         >  SRR4302540.4323398/1‑94 (MQ=60)

                                                                       AATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTT                        >  SRR4302540.6898976/1‑94 (MQ=60)

                                                                        ATATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTT                       >  SRR4302540.3430065/1‑94 (MQ=60)

                                                                         TATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTC                      >  SRR4302540.9000188/1‑94 (MQ=60)

                                                                         TATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTC                      >  SRR4302540.3167438/1‑94 (MQ=60)

                                                                          ATAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCA                     >  SRR4302540.3011314/1‑94 (MQ=60)

                                                                           TGGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCAC                    <  SRR4302540.878364/94‑1 (MQ=60)

                                                                           TAGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCAC                    >  SRR4302540.9198563/1‑94 (MQ=60)

                                                                            AGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACC                   <  SRR4302540.7756158/94‑1 (MQ=60)

                                                                            AGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACC                   <  SRR4302540.4021299/94‑1 (MQ=60)

                                                                            AGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACC                   >  SRR4302540.1745694/1‑94 (MQ=60)

                                                                            AGGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACC                   <  SRR4302540.6059850/94‑1 (MQ=60)

                                                                             GGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCA                  <  SRR4302540.7010333/94‑1 (MQ=60)

                                                                             GGCACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCA                  <  SRR4302540.7956927/94‑1 (MQ=60)

                                                                               CACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGT                <  SRR4302540.123261/94‑1 (MQ=60)

                                                                                ACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTG               >  SRR4302540.3564905/1‑94 (MQ=60)

                                                                                ACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTG               <  SRR4302540.7196722/94‑1 (MQ=60)

                                                                                ACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTG               >  SRR4302540.3382421/1‑94 (MQ=60)

                                                                                ACGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTG               >  SRR4302540.5319604/1‑94 (MQ=60)

                                                                                ACGGGTTCGCAGCGTCCCGGTTGTGGGGTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTG               >  SRR4302540.3382420/1‑94 (MQ=60)

                                                                                 CGGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGG              <  SRR4302540.726019/94‑1 (MQ=60)

                                                                                  GGNTTCGCAGCGTCCCGGTTGNNGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGC             <  SRR4302540.167028/94‑1 (MQ=60)

                                                                                  GGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGGAGTTAATGGTTTCACCAGTGGC             >  SRR4302540.5755210/1‑94 (MQ=60)

                                                                                  GGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGCAGTTAATGGTTTCtccaggtgc             >  SRR4302540.6081750/1‑85 (MQ=60)

                                                                                  GGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGC             <  SRR4302540.6967157/94‑1 (MQ=60)

                                                                                  GGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGC             <  SRR4302540.7533058/94‑1 (MQ=60)

                                                                                  GGGTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTAATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGC             <  SRR4302540.9810517/94‑1 (MQ=60)

                                                                                    GTTCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGA           >  SRR4302540.2135897/1‑94 (MQ=60)

                                                                                     TTCGCAGCGTCCCGGTTGTGGGTTCTAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGGGAAGTTAATGGTTTCACCAGCGGCGAT          >  SRR4302540.6997136/1‑94 (MQ=60)

                                                                                      TCGCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATG         <  SRR4302540.3844409/94‑1 (MQ=60)

                                                                                        GCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAATGTAATGGTTTCACCAGTGGCGATGTT       >  SRR4302540.1289392/1‑94 (MQ=60)

                                                                                        GCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTT       <  SRR4302540.1971446/94‑1 (MQ=60)

                                                                                        GCAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTT       >  SRR4302540.1289394/1‑94 (MQ=60)

                                                                                         CAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC      >  SRR4302540.1765527/1‑94 (MQ=60)

                                                                                         CAGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTC      >  SRR4302540.2695497/1‑94 (MQ=60)

                                                                                          AGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCA     >  SRR4302540.7370661/1‑94 (MQ=60)

                                                                                          AGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCA     >  SRR4302540.9263767/1‑94 (MQ=60)

                                                                                          AGCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCA     >  SRR4302540.3324267/1‑94 (MQ=60)

                                                                                           GCGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGGTCAG    <  SRR4302540.195449/94‑1 (MQ=60)

                                                                                            CGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGT   <  SRR4302540.1708414/94‑1 (MQ=60)

                                                                                            CGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGT   <  SRR4302540.6149910/94‑1 (MQ=60)

                                                                                            CGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGT   <  SRR4302540.9148285/94‑1 (MQ=60)

                                                                                            CGTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGT   <  SRR4302540.1536337/94‑1 (MQ=60)

                                                                                             GTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGTG  <  SRR4302540.3440776/94‑1 (MQ=60)

                                                                                             GTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGTG  >  SRR4302540.3638856/1‑94 (MQ=60)

                                                                                             GTCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGTG  >  SRR4302540.4295396/1‑94 (MQ=60)

ACGTAGTCCGGGTGACCAAACGCCATGTAGATCTTGCCCATTGCGGAACAGTAGAGCGGCATATGCTGGCCAATATAGGCACGGGTTCGCAGCATCCCGGTTGTGGGTTCCAGCTTATAAATCAAAATAGCGTGATCGTCTTCGCGGCTGGAGAAGTTAATGGTTTCACCAGTGGCGATGTTCAGTG  >  NC_000913/3739647‑3739833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`