Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,754,570 G→A V295V (GTC→GTT)  yiaY ← putative oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,754,5700GA99.6% 1736.8 / ‑5.1 481V295V (GTC→GTT) yiaYputative oxidoreductase
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base A (221/257);  total (221/260)
Fisher's exact test for biased strand distribution p-value = 5.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.78e-01

Only 100 of 505 total aligned reads displayed.

GTTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCGACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGC  >  NC_000913/3754480‑3754659
                                                                                          |                                                                                         
 ttAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACt                                                                                        >  1:9953840/1‑93 (MQ=255)
 ttAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACt                                                                                        >  2:6283440/1‑93 (MQ=255)
 ttAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACt                                                                                        <  1:3121434/93‑1 (MQ=255)
 ttAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACt                                                                                        >  1:2274661/1‑93 (MQ=255)
  tAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACtt                                                                                       <  2:555109/93‑1 (MQ=255)
  tAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACtt                                                                                       >  2:92628/1‑93 (MQ=255)
  tAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACtt                                                                                       <  2:9080757/93‑1 (MQ=255)
   aaTGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACttt                                                                                      >  2:6745594/1‑93 (MQ=255)
    aTGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTg                                                                                     >  2:6911342/1‑93 (MQ=255)
    aTGCACGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCAAGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGCGCAGCGGCAACTTTg                                                                                     >  2:2133441/1‑93 (MQ=255)
      gCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCt                                                                                   <  1:5360532/93‑1 (MQ=255)
       cAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTg                                                                                  <  2:5218764/93‑1 (MQ=255)
       cAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTg                                                                                  >  2:3343293/1‑93 (MQ=255)
         ggCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGtt                                                                                >  1:3249896/1‑93 (MQ=255)
          gCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTg                                                                               >  2:5111838/1‑93 (MQ=255)
            ttCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGaa                                                                             >  1:4668754/1‑93 (MQ=255)
             tCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGTCAACTTTGCTGTTGAAt                                                                            >  1:8985252/1‑93 (MQ=255)
             tCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGaaa                                                                            >  1:2137910/1‑92 (MQ=255)
              taGCCCCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATa                                                                           <  1:5608901/92‑1 (MQ=255)
              cAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATa                                                                           <  1:9359240/93‑1 (MQ=255)
              cAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATa                                                                           <  1:6535366/93‑1 (MQ=255)
              cAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATa                                                                           <  1:6203408/93‑1 (MQ=255)
              cAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATa                                                                           <  2:6117618/93‑1 (MQ=255)
              cAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATa                                                                           <  1:4482631/93‑1 (MQ=255)
              cAGCACCTTCCGCGTCGTTTTTACCTGGCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATa                                                                           <  1:8527023/93‑1 (MQ=255)
                gCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATAcc                                                                         <  1:6354917/93‑1 (MQ=255)
                 cACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCt                                                                        <  2:6577297/93‑1 (MQ=255)
                 cACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCt                                                                        <  1:2349086/93‑1 (MQ=255)
                 cACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCt                                                                        <  2:8110432/93‑1 (MQ=255)
                   ccTTCCGCGTCGTTTTGACCGGTCACGTTTACGTCCATTGCAGCGGCACAGTCATGCAGACGTGCAGCAGCGACTTTTTTGTTGAAGACCAGa                                                                      >  2:8181875/1‑93 (MQ=255)
                    cTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGaa                                                                     <  2:845138/93‑1 (MQ=255)
                    cTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGaa                                                                     >  1:9134204/1‑93 (MQ=255)
                     ttCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAAc                                                                    <  1:5031372/93‑1 (MQ=255)
                     ttCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAAc                                                                    >  2:2002446/1‑93 (MQ=255)
                      tCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACg                                                                   >  2:1404124/1‑93 (MQ=255)
                      tCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACg                                                                   <  2:7406871/93‑1 (MQ=255)
                      tCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACg                                                                   >  2:2602622/1‑93 (MQ=255)
                         gcgTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGc                                                                <  2:1901178/93‑1 (MQ=255)
                         gcgTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGc                                                                <  1:6922675/93‑1 (MQ=255)
                         ccgtcgtTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATCCCTGAACGTGc                                                                <  2:3502902/92‑1 (MQ=255)
                          cggcgtTTTTCCCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCg                                                               <  2:7481930/90‑1 (MQ=255)
                             cgtTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGgca                                                            <  2:4492882/93‑1 (MQ=255)
                              gtTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGgcag                                                           <  2:4766571/93‑1 (MQ=255)
                               tttttACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATATCTGAACGTGCGgcagc                                                          >  2:2262257/1‑93 (MQ=255)
                                ttttACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGgcagca                                                         >  1:7318346/1‑93 (MQ=255)
                                ttttACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGgcagca                                                         >  1:4921069/1‑93 (MQ=255)
                                 tttACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCTGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCaa                                                        <  1:2668289/93‑1 (MQ=255)
                                 tttACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCaa                                                        <  1:9538323/93‑1 (MQ=255)
                                   tACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCaaaa                                                      <  1:3676294/93‑1 (MQ=255)
                                   tACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCaaaa                                                      <  2:3621277/93‑1 (MQ=255)
                                    aCCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCaaaat                                                     <  2:1196743/93‑2 (MQ=255)
                                    aCCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAAc                                                     >  1:8724864/1‑93 (MQ=255)
                                       tGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGc                                                  >  2:4918200/1‑93 (MQ=255)
                                       tGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGc                                                  <  2:9502491/93‑1 (MQ=255)
                                            cGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTtac                                             <  1:3880131/93‑1 (MQ=255)
                                            cGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTtac                                             <  2:7110410/93‑1 (MQ=255)
                                             gTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTtaca                                            <  2:7682635/93‑1 (MQ=255)
                                              ttCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTtacat                                           >  1:1461780/1‑93 (MQ=255)
                                              ttCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTtacat                                           <  1:1608045/93‑1 (MQ=255)
                                              ttCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTtacat                                           >  2:3962716/1‑93 (MQ=255)
                                               tCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTtacata                                          <  1:3414133/93‑1 (MQ=255)
                                               tCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTtacata                                          <  1:5702289/93‑1 (MQ=255)
                                                cACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTtacatac                                         >  2:1618860/1‑93 (MQ=255)
                                                  cGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATacac                                       >  1:4000348/1‑93 (MQ=255)
                                                   gCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACAcc                                      <  2:8856347/93‑1 (MQ=255)
                                                     ccATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCgt                                    >  1:1135835/1‑93 (MQ=255)
                                                     ccATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCgt                                    >  1:7795209/1‑93 (MQ=255)
                                                      cATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCgtg                                   <  1:5175603/93‑1 (MQ=255)
                                                       aTTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCgtgt                                  <  2:1058872/93‑1 (MQ=255)
                                                        ttGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGtgtg                                 >  2:5821044/1‑93 (MQ=255)
                                                        ttGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGtgtg                                 >  1:4623483/1‑93 (MQ=255)
                                                        ttGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGtgtg                                 >  2:7235899/1‑93 (MQ=255)
                                                        ttGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGtgtg                                 <  1:2834437/93‑1 (MQ=255)
                                                          gCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGc                               <  2:4224847/93‑1 (MQ=255)
                                                             gCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAgg                            >  1:672055/1‑93 (MQ=255)
                                                             gCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAgg                            >  1:2058625/1‑93 (MQ=255)
                                                                gCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTg                         >  2:5366243/1‑93 (MQ=255)
                                                                 cacaGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGt                        <  1:4291827/93‑1 (MQ=255)
                                                                   caGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAg                      >  1:10005987/1‑93 (MQ=255)
                                                                    aGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGa                     <  1:746753/93‑1 (MQ=255)
                                                                     gTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGaa                    >  1:971635/1‑93 (MQ=255)
                                                                     gTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGaa                    >  1:2475926/1‑93 (MQ=255)
                                                                     gTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGaa                    >  1:4774503/1‑93 (MQ=255)
                                                                     gTCACGCAGACGCGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGaa                    >  2:3792113/1‑93 (MQ=255)
                                                                         cGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCg                <  2:3085087/93‑1 (MQ=255)
                                                                          gCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCCTGTGGCAGGTTGTAGaaaacac               >  2:5732996/1‑89 (MQ=255)
                                                                           cAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGcc              <  2:978780/93‑1 (MQ=255)
                                                                           cAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGcc              <  2:8709610/93‑1 (MQ=255)
                                                                           cAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGcc              >  1:5804367/1‑93 (MQ=255)
                                                                           cAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGcc              >  2:2908445/1‑93 (MQ=255)
                                                                             gACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCa            >  1:8030566/1‑93 (MQ=255)
                                                                                 tGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTg        <  1:760216/93‑1 (MQ=255)
                                                                                 tGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGCAGAAACAGCCCAGCTg        >  1:2925193/1‑93 (MQ=255)
                                                                                   cAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGt      >  2:1726614/1‑93 (MQ=255)
                                                                                    aGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGTCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTg     <  2:8034549/93‑1 (MQ=255)
                                                                                    aGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCTTGTGGCAGGTTGTAGAAACCGCCCCGCTGGTg     >  1:7088546/1‑93 (MQ=255)
                                                                                    aGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTg     <  1:1911041/93‑1 (MQ=255)
                                                                                     gcggcaACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACCGCGTTACATCCACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTgc    >  2:3718374/1‑93 (MQ=255)
                                                                                      cggcaACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTgcg   >  1:1241511/1‑93 (MQ=255)
                                                                                       ggcaACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTgcgc  >  1:8371484/1‑93 (MQ=255)
                                                                                          |                                                                                         
GTTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCGACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGC  >  NC_000913/3754480‑3754659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 270 total aligned reads displayed.
GGCGTTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCGACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGCCATC  >  NC_000913/3754477‑3754663
                                                                                             |                                                                                             
GGCGTTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCA                                                                                               >  SRR4302540.552190/1‑94 (MQ=60)
 GCGTTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAA                                                                                              >  SRR4302540.8577441/1‑94 (MQ=60)
   GTTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACT                                                                                            >  SRR4302540.10070030/1‑94 (MQ=60)
   GTTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACT                                                                                            >  SRR4302540.5098526/1‑94 (MQ=60)
   GTTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACT                                                                                            >  SRR4302540.2299084/1‑94 (MQ=60)
   GGTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACT                                                                                            <  SRR4302540.5349471/94‑1 (MQ=60)
    TTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTT                                                                                           >  SRR4302540.4318394/1‑94 (MQ=60)
    TTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTT                                                                                           <  SRR4302540.3155542/94‑1 (MQ=60)
    TTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTT                                                                                           >  SRR4302540.4746932/1‑94 (MQ=60)
    TTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTT                                                                                           >  SRR4302540.750549/1‑94 (MQ=60)
     TAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTT                                                                                          <  SRR4302540.9810343/94‑1 (MQ=60)
      AATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTG                                                                                         >  SRR4302540.540540/1‑94 (MQ=60)
       ATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGC                                                                                        >  SRR4302540.706726/1‑94 (MQ=60)
        TGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCT                                                                                       <  SRR4302540.363254/94‑1 (MQ=60)
        TGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCT                                                                                       <  SRR4302540.7601718/94‑1 (MQ=60)
         GCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTG                                                                                      <  SRR4302540.4693052/94‑1 (MQ=60)
         GCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTG                                                                                      >  SRR4302540.6759137/1‑94 (MQ=60)
         GCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTG                                                                                      >  SRR4302540.8689428/1‑94 (MQ=60)
          CAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGT                                                                                     <  SRR4302540.2601618/94‑1 (MQ=60)
           AGGCTTCAGCCCCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTT                                                                                    <  SRR4302540.1489662/94‑1 (MQ=60)
           AGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTT                                                                                    >  SRR4302540.3285293/1‑94 (MQ=60)
           AGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTT                                                                                    <  SRR4302540.6565608/94‑1 (MQ=60)
           AGGCTTCAGCACATTCCGCGTCGTTTTTCCCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTT                                                                                    <  SRR4302540.268737/94‑1 (MQ=60)
            GGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTG                                                                                   <  SRR4302540.9511596/94‑1 (MQ=60)
             GCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGA                                                                                  <  SRR4302540.3900683/94‑1 (MQ=60)
             GCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGA                                                                                  <  SRR4302540.8595276/94‑1 (MQ=60)
             GCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGA                                                                                  <  SRR4302540.2911887/94‑1 (MQ=60)
              CTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAA                                                                                 <  SRR4302540.6540971/94‑1 (MQ=60)
              CTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAA                                                                                 >  SRR4302540.1121858/1‑94 (MQ=60)
              CTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAA                                                                                 >  SRR4302540.6869679/1‑94 (MQ=60)
              CTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAA                                                                                 >  SRR4302540.4718725/1‑94 (MQ=60)
              CTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAA                                                                                 >  SRR4302540.2012155/1‑94 (MQ=60)
               cgcacgcCCTTCCGCGTCGTTTTTACCTGTCCCGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAAT                                                                                <  SRR4302540.2938037/87‑1 (MQ=60)
               TTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGCAT                                                                                >  SRR4302540.6703063/1‑94 (MQ=60)
               TTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAAT                                                                                <  SRR4302540.304667/94‑1 (MQ=60)
               TTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAAT                                                                                >  SRR4302540.2160876/1‑94 (MQ=60)
               TTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAAT                                                                                <  SRR4302540.7528995/94‑1 (MQ=60)
               TTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAAT                                                                                <  SRR4302540.7423744/94‑1 (MQ=60)
               TTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAAT                                                                                <  SRR4302540.10130697/94‑1 (MQ=60)
               TTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAAT                                                                                >  SRR4302540.3161258/1‑94 (MQ=60)
               TTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAAT                                                                                <  SRR4302540.4598502/94‑1 (MQ=60)
               TTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAAA                                                                                >  SRR4302540.2160877/1‑94 (MQ=60)
               TTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGGGCAGCGCCAACTTTGCTGTcgaaa                                                                                >  SRR4302540.2307357/1‑89 (MQ=60)
                 tagccCCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATAC                                                                              <  SRR4302540.5670606/89‑1 (MQ=60)
                 CAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATAC                                                                              <  SRR4302540.4531248/94‑1 (MQ=60)
                 CAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATAC                                                                              <  SRR4302540.6272459/94‑1 (MQ=60)
                 CAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATAC                                                                              >  SRR4302540.865018/1‑94 (MQ=60)
                 CAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATAC                                                                              <  SRR4302540.5619832/94‑1 (MQ=60)
                 CAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATAC                                                                              <  SRR4302540.3717986/94‑1 (MQ=60)
                 CAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATAC                                                                              <  SRR4302540.9470700/94‑1 (MQ=60)
                 CAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATAC                                                                              <  SRR4302540.6607904/94‑1 (MQ=60)
                  AGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCATACGTGCAGCGGCAACTTTGCTGTTGCATACC                                                                             >  SRR4302540.5800562/1‑94 (MQ=60)
                  AGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACC                                                                             >  SRR4302540.5379799/1‑94 (MQ=60)
                  AGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACC                                                                             >  SRR4302540.2199794/1‑94 (MQ=60)
                    CACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTG                                                                           >  SRR4302540.9831540/1‑94 (MQ=60)
                    CACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTG                                                                           >  SRR4302540.1408023/1‑94 (MQ=60)
                     ACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGA                                                                          >  SRR4302540.4668315/1‑94 (MQ=60)
                     ACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGA                                                                          <  SRR4302540.4681007/94‑1 (MQ=60)
                      CCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAA                                                                         >  SRR4302540.9243977/1‑94 (MQ=60)
                      CCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAA                                                                         >  SRR4302540.6410348/1‑94 (MQ=60)
                       CTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAAC                                                                        <  SRR4302540.8829442/94‑1 (MQ=60)
                       CTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAAC                                                                        >  SRR4302540.3213083/1‑94 (MQ=60)
                       CTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCAGCAACTTTGCTGTTGAATACCTGAAC                                                                        >  SRR4302540.8065326/1‑94 (MQ=60)
                        TTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACG                                                                       <  SRR4302540.5085817/94‑1 (MQ=60)
                         TCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGT                                                                      >  SRR4302540.3490988/1‑94 (MQ=60)
                          TCGCGTCGTTTTTTCCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTG                                                                     <  SRR4302540.3400121/94‑1 (MQ=60)
                          CCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTG                                                                     >  SRR4302540.3433656/1‑94 (MQ=60)
                            GCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCG                                                                   >  SRR4302540.4976330/1‑94 (MQ=60)
                             CGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGG                                                                  >  SRR4302540.23462/1‑94 (MQ=60)
                              GTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGC                                                                 >  SRR4302540.2102023/1‑94 (MQ=60)
                               TCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCGGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCA                                                                <  SRR4302540.2856293/94‑1 (MQ=60)
                               TCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCA                                                                <  SRR4302540.6467575/94‑1 (MQ=60)
                               TCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCA                                                                <  SRR4302540.2485017/94‑1 (MQ=60)
                                CGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAG                                                               <  SRR4302540.7198173/94‑1 (MQ=60)
                                 GTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGC                                                              >  SRR4302540.5131034/1‑94 (MQ=60)
                                  TTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCA                                                             >  SRR4302540.7400085/1‑94 (MQ=60)
                                  TTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCA                                                             >  SRR4302540.10044252/1‑94 (MQ=60)
                                  TTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCA                                                             >  SRR4302540.4974088/1‑94 (MQ=60)
                                   TTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAA                                                            >  SRR4302540.4460256/1‑94 (MQ=60)
                                   TTTTACCTGTCACGTGCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAA                                                            <  SRR4302540.8589346/94‑1 (MQ=60)
                                    TTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCTGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAA                                                           <  SRR4302540.2697203/94‑1 (MQ=60)
                                    TTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAA                                                           <  SRR4302540.9651211/94‑1 (MQ=60)
                                     TTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAA                                                          >  SRR4302540.2115750/1‑94 (MQ=60)
                                      TACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGATGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAAC                                                         <  SRR4302540.1277238/94‑1 (MQ=60)
                                      TACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAAC                                                         <  SRR4302540.6651225/94‑1 (MQ=60)
                                      TACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAAC                                                         >  SRR4302540.8826179/1‑94 (MQ=60)
                                      TACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAAC                                                         <  SRR4302540.4786175/94‑1 (MQ=60)
                                      TACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAAC                                                         <  SRR4302540.3716490/94‑1 (MQ=60)
                                      TACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAAC                                                         <  SRR4302540.7604300/94‑1 (MQ=60)
                                       ACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGCACGTGCGGCAGCAAAACG                                                        >  SRR4302540.5525979/1‑94 (MQ=60)
                                       ACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACG                                                        <  SRR4302540.6885767/94‑1 (MQ=60)
                                        CCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGG                                                       <  SRR4302540.8075448/94‑1 (MQ=60)
                                        CCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGG                                                       >  SRR4302540.6366987/1‑94 (MQ=60)
                                         CTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGC                                                      <  SRR4302540.2047920/94‑1 (MQ=60)
                                          TGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCG                                                     >  SRR4302540.10070764/1‑94 (MQ=60)
                                           GTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGT                                                    >  SRR4302540.4803300/1‑94 (MQ=60)
                                           GTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGT                                                    <  SRR4302540.467974/94‑1 (MQ=60)
                                            TCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTT                                                   <  SRR4302540.8883734/94‑1 (MQ=60)
                                            TCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTT                                                   <  SRR4302540.5155520/94‑1 (MQ=60)
                                              ACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTAC                                                 <  SRR4302540.8730056/94‑1 (MQ=60)
                                              ACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTAC                                                 <  SRR4302540.5053781/94‑1 (MQ=60)
                                              ACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACCTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTAC                                                 >  SRR4302540.1075219/1‑94 (MQ=60)
                                               CGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAGCGTGCGGCAGCAAAACGGCGTTACA                                                <  SRR4302540.3922293/94‑1 (MQ=60)
                                               CGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACA                                                <  SRR4302540.9765262/94‑1 (MQ=60)
                                               CGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACA                                                <  SRR4302540.9633770/94‑1 (MQ=60)
                                               CGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACA                                                <  SRR4302540.3922291/94‑1 (MQ=60)
                                                GTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATCCCTGAACGTGCGGCAGCAAAACGGCGTTAaaa                                               >  SRR4302540.2420198/1‑91 (MQ=60)
                                                GTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACAT                                               >  SRR4302540.1477713/1‑94 (MQ=60)
                                                GTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACAT                                               >  SRR4302540.1477714/1‑94 (MQ=60)
                                                GTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACAT                                               >  SRR4302540.9366738/1‑94 (MQ=60)
                                                GTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACAT                                               >  SRR4302540.269389/1‑94 (MQ=60)
                                                GTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGAAAAACGGagttccaa                                               >  SRR4302540.2420199/1‑86 (MQ=60)
                                                 TTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATA                                              <  SRR4302540.1625647/94‑1 (MQ=60)
                                                 TTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATA                                              <  SRR4302540.373130/94‑1 (MQ=60)
                                                  TCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATAC                                             <  SRR4302540.5765075/94‑1 (MQ=60)
                                                  TCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATAC                                             <  SRR4302540.3409972/94‑1 (MQ=60)
                                                   CACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACA                                            <  SRR4302540.907380/94‑1 (MQ=60)
                                                    ACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACAC                                           <  SRR4302540.784744/94‑1 (MQ=60)
                                                    ACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACAC                                           >  SRR4302540.4056980/1‑94 (MQ=60)
                                                    ACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACAC                                           >  SRR4302540.4043397/1‑94 (MQ=60)
                                                       CCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGT                                        >  SRR4302540.1147676/1‑94 (MQ=60)
                                                        CCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTG                                       >  SRR4302540.318487/1‑94 (MQ=60)
                                                        CCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTG                                       >  SRR4302540.4865204/1‑94 (MQ=60)
                                                         CATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGT                                      <  SRR4302540.5231932/94‑1 (MQ=60)
                                                         CATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGT                                      >  SRR4302540.9116154/1‑94 (MQ=60)
                                                         CAGTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGT                                      <  SRR4302540.1167535/94‑1 (MQ=60)
                                                          ATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTG                                     <  SRR4302540.7862285/94‑1 (MQ=60)
                                                          ATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTG                                     >  SRR4302540.5750870/1‑94 (MQ=60)
                                                          ATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTG                                     >  SRR4302540.1245803/1‑94 (MQ=60)
                                                          ATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTG                                     >  SRR4302540.3568858/1‑94 (MQ=60)
                                                           TTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGG                                    <  SRR4302540.2865096/94‑1 (MQ=60)
                                                           TTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGG                                    >  SRR4302540.4902638/1‑94 (MQ=60)
                                                           TTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGG                                    >  SRR4302540.4825584/1‑94 (MQ=60)
                                                               AGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGG                                >  SRR4302540.8178414/1‑94 (MQ=60)
                                                               AGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGG                                >  SRR4302540.679257/1‑94 (MQ=60)
                                                               AGCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGG                                >  SRR4302540.2080783/1‑94 (MQ=60)
                                                                GCGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGT                               <  SRR4302540.9411481/94‑1 (MQ=60)
                                                                 CGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTT                              <  SRR4302540.8293001/94‑1 (MQ=60)
                                                                 CGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTT                              <  SRR4302540.4167131/94‑1 (MQ=60)
                                                                 CGGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTT                              <  SRR4302540.4001061/94‑1 (MQ=60)
                                                                  GGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTG                             <  SRR4302540.3097070/94‑1 (MQ=60)
                                                                  GGCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTG                             <  SRR4302540.7360830/94‑1 (MQ=60)
                                                                   GCACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGT                            >  SRR4302540.6164403/1‑94 (MQ=60)
                                                                    CACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTA                           <  SRR4302540.4338521/94‑1 (MQ=60)
                                                                    CACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTA                           <  SRR4302540.4338522/94‑1 (MQ=60)
                                                                     ACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAG                          >  SRR4302540.9633690/1‑94 (MQ=60)
                                                                     ACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAG                          >  SRR4302540.10122525/1‑94 (MQ=60)
                                                                     ACAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAG                          >  SRR4302540.4977122/1‑94 (MQ=60)
                                                                      CAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGA                         >  SRR4302540.1753922/1‑94 (MQ=60)
                                                                      CAGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGA                         >  SRR4302540.1753921/1‑94 (MQ=60)
                                                                       AGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAA                        >  SRR4302540.2502584/1‑94 (MQ=60)
                                                                       AGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAA                        <  SRR4302540.754709/94‑1 (MQ=60)
                                                                       AGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAA                        >  SRR4302540.4825508/1‑94 (MQ=60)
                                                                       AGTCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAA                        >  SRR4302540.2267728/1‑94 (MQ=60)
                                                                         TCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAAC                      >  SRR4302540.578086/1‑94 (MQ=60)
                                                                         TCACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAAC                      >  SRR4302540.5741378/1‑94 (MQ=60)
                                                                          CACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACC                     <  SRR4302540.2923799/94‑1 (MQ=60)
                                                                          CACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACC                     <  SRR4302540.804284/94‑1 (MQ=60)
                                                                          CACGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACC                     <  SRR4302540.6391526/94‑1 (MQ=60)
                                                                            CGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGC                   <  SRR4302540.2832747/94‑1 (MQ=60)
                                                                            CGCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGC                   >  SRR4302540.8227415/1‑94 (MQ=60)
                                                                             GCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCC                  >  SRR4302540.2937719/1‑94 (MQ=60)
                                                                             GCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCC                  >  SRR4302540.118573/1‑94 (MQ=60)
                                                                             GCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCC                  >  SRR4302540.5868503/1‑94 (MQ=60)
                                                                             GCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCC                  <  SRR4302540.1309432/94‑1 (MQ=60)
                                                                             GCAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGGTGTAGAAACCGCC                  >  SRR4302540.9764255/1‑94 (MQ=60)
                                                                              CAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCC                 >  SRR4302540.6247573/1‑94 (MQ=60)
                                                                              CAGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCC                 <  SRR4302540.4468223/94‑1 (MQ=60)
                                                                               AGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCA                >  SRR4302540.2233650/1‑94 (MQ=60)
                                                                               AGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCA                >  SRR4302540.7570834/1‑94 (MQ=60)
                                                                               AGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCA                <  SRR4302540.7136787/94‑1 (MQ=60)
                                                                               AGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCA                >  SRR4302540.8123934/1‑94 (MQ=60)
                                                                               AGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCA                >  SRR4302540.6225736/1‑94 (MQ=60)
                                                                               AGACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGGTGTAGAAACCGCCCC                >  SRR4302540.2299543/1‑94 (MQ=60)
                                                                                GACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAG               <  SRR4302540.1786220/94‑1 (MQ=60)
                                                                                GACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAG               <  SRR4302540.6945977/94‑1 (MQ=60)
                                                                                GACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAG               <  SRR4302540.4627639/94‑1 (MQ=60)
                                                                                GACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAG               <  SRR4302540.5793215/94‑1 (MQ=60)
                                                                                GACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAG               <  SRR4302540.1597025/94‑1 (MQ=60)
                                                                                GACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAG               <  SRR4302540.5488010/94‑1 (MQ=60)
                                                                                 ACGTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGC              >  SRR4302540.9352570/1‑94 (MQ=60)
                                                                                  CGTGCAGCGGCAACTTTGCTGTTAAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCT             <  SRR4302540.10058970/94‑1 (MQ=60)
                                                                                   GTGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGCAGAAACAGCCCAGCTG            >  SRR4302540.2957256/1‑94 (MQ=60)
                                                                                    TGCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGG           <  SRR4302540.768305/94‑1 (MQ=60)
                                                                                     GCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGT          <  SRR4302540.4038139/94‑1 (MQ=60)
                                                                                     GCAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGT          <  SRR4302540.9171165/94‑1 (MQ=60)
                                                                                      CAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCTTGTGGCAGGTTGTAGAAACCGCCCCGCTGGTG         >  SRR4302540.7167426/1‑94 (MQ=60)
                                                                                      CAGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTG         >  SRR4302540.7167662/1‑94 (MQ=60)
                                                                                       AGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAACCCGCCCAGCTGGTGC        <  SRR4302540.2044811/94‑1 (MQ=60)
                                                                                       AGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGC        <  SRR4302540.285270/94‑1 (MQ=60)
                                                                                       AGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGC        >  SRR4302540.9108419/1‑94 (MQ=60)
                                                                                       AGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGC        <  SRR4302540.7711663/94‑1 (MQ=60)
                                                                                       AGCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGC        <  SRR4302540.8507134/94‑1 (MQ=60)
                                                                                        GCGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCG       <  SRR4302540.7090871/94‑1 (MQ=60)
                                                                                         CGGCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGC      >  SRR4302540.8468636/1‑94 (MQ=60)
                                                                                           GCAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGCCA    >  SRR4302540.308705/1‑94 (MQ=60)
                                                                                            CAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGCCAT   >  SRR4302540.5619896/1‑94 (MQ=60)
                                                                                            CAACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGCCAT   >  SRR4302540.9826657/1‑94 (MQ=60)
                                                                                             AACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGCCATC  >  SRR4302540.8946788/1‑94 (MQ=60)
                                                                                             AACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGCCATC  <  SRR4302540.7845085/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGCGTTAATGCAGGCTTCAGCACCTTCCGCGTCGTTTTTACCTGTCACGTTCACGCCCATTGCAGCGGCACAGTCACGCAGACGTGCAGCGGCGACTTTGCTGTTGAATACCTGAACGTGCGGCAGCAAAACGGCGTTACATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGCCATC  >  NC_000913/3754477‑3754663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑