Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,774,290 A→G intergenic (‑283/‑2) b4550 ← / → yibL hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,774,2900AG99.8% 1758.7 / ‑5.1 535intergenic (‑283/‑2)b4550/yibLhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (262/272);  minor base T (1/0);  total (263/272)
Fisher's exact test for biased strand distribution p-value = 4.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.73e-01

Only 100 of 558 total aligned reads displayed.

TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG  >  NC_000913/3774200‑3774379
                                                                                           |                                                                                          
ttACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATcgca                                                                                          <  2:8331176/93‑1 (MQ=255)
ttACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATcgca                                                                                          >  1:3865683/1‑93 (MQ=255)
ttACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATcgca                                                                                          <  2:7188516/93‑1 (MQ=255)
 tACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAt                                                                                         >  1:3270709/1‑93 (MQ=255)
  aCAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATg                                                                                        >  2:6153905/1‑93 (MQ=255)
  aCAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATg                                                                                        >  2:350409/1‑93 (MQ=255)
  aCAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATg                                                                                        >  1:1503965/1‑93 (MQ=255)
   cAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGa                                                                                       >  2:5426932/1‑93 (MQ=255)
   cAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGa                                                                                       <  1:4788903/93‑1 (MQ=255)
    aGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGaa                                                                                      <  1:8901339/93‑1 (MQ=255)
     gAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGaaa                                                                                     <  2:1320006/93‑1 (MQ=255)
     gAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGaaa                                                                                     >  2:404382/1‑93 (MQ=255)
     gAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGaaa                                                                                     <  2:5591369/93‑1 (MQ=255)
      aaCTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaag                                                                                    >  1:5565958/1‑93 (MQ=255)
       aCTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaaga                                                                                   >  1:4617716/1‑93 (MQ=255)
       aCTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaaga                                                                                   <  1:7402715/93‑1 (MQ=255)
       aCTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaaga                                                                                   >  2:3213021/1‑93 (MQ=255)
       aCTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaaga                                                                                   <  1:424855/93‑1 (MQ=255)
       aCTATTACAATGTCATTAGCTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaaga                                                                                   <  2:3916212/93‑1 (MQ=255)
        cTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaa                                                                                  >  1:9797736/1‑93 (MQ=255)
          aTTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGt                                                                                <  2:9492216/93‑1 (MQ=255)
           ttACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTc                                                                              <  1:7075552/93‑1 (MQ=255)
             aCAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAACTTTATCTTTCTCAGAAGCCATCGCATGAAAGAAGTCGa                                                                            >  1:1179447/1‑93 (MQ=255)
              cAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaa                                                                           >  2:5166778/1‑93 (MQ=255)
                aTGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaa                                                                         <  1:7577603/93‑1 (MQ=255)
                 tGTCATTAGTTGTGAATAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCTTGAAAGAAGTCGaaaaa                                                                        >  2:491155/1‑93 (MQ=255)
                 tGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaa                                                                        >  1:7931704/1‑93 (MQ=255)
                 tGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaa                                                                        >  1:8060382/1‑93 (MQ=255)
                 tGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaa                                                                        >  2:8580195/1‑93 (MQ=255)
                  gTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaaa                                                                       <  2:6464367/93‑1 (MQ=255)
                   tCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaaaa                                                                      <  1:365066/93‑1 (MQ=255)
                   tCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaaaa                                                                      <  2:3758753/93‑1 (MQ=255)
                    cATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAAc                                                                     >  1:1682053/1‑93 (MQ=255)
                    cATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAAc                                                                     >  1:225440/1‑93 (MQ=255)
                       tAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaa                                                                  >  1:8438729/1‑93 (MQ=255)
                          gtgtgGACAAAGCACCTGGTCGCGCATACTAGGAGCTAGAAATTTATCTTTATCAGAAGCCATCGCATGAAAAAAGTCGAAAAAAACGAAATc                                                               <  1:6421295/92‑1 (MQ=255)
                           tgtgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCa                                                              <  1:2866503/93‑1 (MQ=255)
                           tgtgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCa                                                              >  2:8999854/1‑93 (MQ=255)
                            gtgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaa                                                             <  1:5879777/93‑1 (MQ=255)
                            gtgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaa                                                             <  1:8744212/93‑1 (MQ=255)
                             tgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaaa                                                            <  2:1029953/93‑1 (MQ=255)
                             tgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaaa                                                            <  1:4397606/93‑1 (MQ=255)
                              gAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAc                                                           <  2:7373998/93‑1 (MQ=255)
                              gAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAc                                                           <  2:3713069/93‑1 (MQ=255)
                              gAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAc                                                           <  1:9971688/93‑1 (MQ=255)
                               aaCAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACg                                                          <  2:9191168/93‑1 (MQ=255)
                                 cAAAGCATCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGcc                                                        <  1:7187669/93‑1 (MQ=255)
                                 cAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGcc                                                        <  2:8286331/93‑1 (MQ=255)
                                 cAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGcc                                                        <  1:6568936/93‑1 (MQ=255)
                                  aaaGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCt                                                       <  2:2522412/93‑1 (MQ=255)
                                  aaaGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCt                                                       <  2:5256598/93‑1 (MQ=255)
                                   aaGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTc                                                      >  1:4015968/1‑93 (MQ=255)
                                    aGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCa                                                     >  1:2382853/1‑93 (MQ=255)
                                    aGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCa                                                     <  2:1188895/93‑1 (MQ=255)
                                     gCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAg                                                    >  1:5170447/1‑93 (MQ=255)
                                      cACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGc                                                   >  2:8134885/1‑93 (MQ=255)
                                        ccTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGa                                                 <  2:7882005/93‑1 (MQ=255)
                                        ccTGGTCCGCATTCTAGGGGCTAATAAATTAACCTTAACCAGAGCCAACCCCATAAAAAAGTCCAAAAAAAACGAAATCAAACGCCTCAGCGa                                                 <  2:1702760/93‑1 (MQ=255)
                                          tGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATc                                               <  2:8695445/93‑1 (MQ=255)
                                             tCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGcc                                            >  2:8789426/1‑93 (MQ=255)
                                               gcgcATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTg                                          >  2:4585602/1‑93 (MQ=255)
                                                cgcATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTgg                                         <  1:7682556/93‑1 (MQ=255)
                                                 gcATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGa                                        <  1:2047235/93‑1 (MQ=255)
                                                  cATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGAc                                       <  2:6336406/93‑1 (MQ=255)
                                                   aTACTAGGGGCTATAAATTTATCTTTATCAGAATCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACg                                      <  2:484087/93‑1 (MQ=255)
                                                      cTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCa                                   <  1:2656113/93‑1 (MQ=255)
                                                      cTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCa                                   >  2:6720376/1‑93 (MQ=255)
                                                        aGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATc                                 <  2:1510329/93‑1 (MQ=255)
                                                        aGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATc                                 <  2:2259120/93‑1 (MQ=255)
                                                        aGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATc                                 <  2:6047553/93‑1 (MQ=255)
                                                        aGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATc                                 >  2:189791/1‑93 (MQ=255)
                                                         ggggCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATcc                                >  2:2901101/1‑93 (MQ=255)
                                                          gggCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCg                               >  1:5006549/1‑93 (MQ=255)
                                                           ggCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGc                              >  1:9106980/1‑93 (MQ=255)
                                                            gCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGcc                             >  2:446685/1‑93 (MQ=255)
                                                             cTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGcca                            >  1:3972453/1‑93 (MQ=255)
                                                             cTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGcca                            >  2:4224086/1‑93 (MQ=255)
                                                              tataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccac                           >  1:3115958/1‑93 (MQ=255)
                                                                ataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacc                          >  2:2711593/1‑93 (MQ=255)
                                                                ataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacc                          >  1:10005669/1‑93 (MQ=255)
                                                                 taAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacca                         <  2:9846898/93‑1 (MQ=255)
                                                                 taAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacca                         >  1:3491919/1‑93 (MQ=255)
                                                                   aaTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagc                       >  1:1339262/1‑93 (MQ=255)
                                                                   aaTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagc                       >  2:7708175/1‑93 (MQ=255)
                                                                    aTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagca                      <  2:6853172/93‑1 (MQ=255)
                                                                    aTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagca                      <  2:7985558/93‑1 (MQ=255)
                                                                      ttatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATAGCCTGGCCGCCATCCCCCCCCAGCAgg                    >  1:8136617/1‑93 (MQ=255)
                                                                       tatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGc                   >  1:233238/1‑93 (MQ=255)
                                                                           tttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGAt               >  1:7834097/1‑93 (MQ=255)
                                                                           tttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGAt               >  1:6168369/1‑93 (MQ=255)
                                                                            ttatcAGAAGCCATCGCATGAAAGAAGACGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATc              <  1:5675308/93‑1 (MQ=255)
                                                                                  gAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGc        <  2:5714615/93‑1 (MQ=255)
                                                                                  gAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGc        >  1:1091881/1‑93 (MQ=255)
                                                                                   aaGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCt       <  1:9653160/93‑1 (MQ=255)
                                                                                    aGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTg      <  1:5765110/93‑1 (MQ=255)
                                                                                    aGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTg      >  1:6742528/1‑93 (MQ=255)
                                                                                    aGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTg      >  1:5358331/1‑93 (MQ=255)
                                                                                       cATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGtt   <  2:3115570/93‑1 (MQ=255)
                                                                                       cATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGtt   >  2:5944315/1‑93 (MQ=255)
                                                                                        aTCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTg  >  1:7771374/1‑93 (MQ=255)
                                                                                           |                                                                                          
TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG  >  NC_000913/3774200‑3774379

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 295 total aligned reads displayed.
ACGTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGC  >  NC_000913/3774197‑3774383
                                                                                             |                                                                                             
TCGTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCG                                                                                               <  SRR4302540.7788174/94‑1 (MQ=60)
ACGTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCG                                                                                               <  SRR4302540.3459222/94‑1 (MQ=60)
ACGTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCG                                                                                               <  SRR4302540.1111813/94‑1 (MQ=60)
 CGTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGC                                                                                              <  SRR4302540.4162004/94‑1 (MQ=60)
  GTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCA                                                                                             >  SRR4302540.3907703/1‑94 (MQ=60)
   TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAT                                                                                            <  SRR4302540.515257/94‑1 (MQ=60)
   TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAT                                                                                            >  SRR4302540.3306408/1‑94 (MQ=60)
   TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAT                                                                                            <  SRR4302540.1642406/94‑1 (MQ=60)
   TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAT                                                                                            <  SRR4302540.3101267/94‑1 (MQ=60)
   TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAT                                                                                            <  SRR4302540.4598234/94‑1 (MQ=60)
    TACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATG                                                                                           <  SRR4302540.7915728/94‑1 (MQ=60)
    TACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATG                                                                                           >  SRR4302540.1520551/1‑94 (MQ=60)
     ACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGA                                                                                          >  SRR4302540.7211449/1‑94 (MQ=60)
     ACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGA                                                                                          <  SRR4302540.7632192/94‑1 (MQ=60)
      CAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAA                                                                                         >  SRR4302540.7346411/1‑94 (MQ=60)
      CAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAA                                                                                         <  SRR4302540.4840115/94‑1 (MQ=60)
       AGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAA                                                                                        <  SRR4302540.9004381/94‑1 (MQ=60)
       AGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAA                                                                                        >  SRR4302540.5681791/1‑94 (MQ=60)
         AACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGA                                                                                      >  SRR4302540.4045578/1‑94 (MQ=60)
         AACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGA                                                                                      <  SRR4302540.5427753/94‑1 (MQ=60)
         AACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGA                                                                                      >  SRR4302540.3693729/1‑94 (MQ=60)
          ACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAA                                                                                     <  SRR4302540.808721/94‑1 (MQ=60)
          ACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAA                                                                                     <  SRR4302540.7901012/94‑1 (MQ=60)
          ACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAA                                                                                     >  SRR4302540.9912478/1‑94 (MQ=60)
           CTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAG                                                                                    >  SRR4302540.7559246/1‑94 (MQ=60)
           CTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAG                                                                                    >  SRR4302540.3441789/1‑94 (MQ=60)
           CTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAG                                                                                    <  SRR4302540.1060645/94‑1 (MQ=60)
           CTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAG                                                                                    >  SRR4302540.4459231/1‑94 (MQ=60)
           CTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAG                                                                                    <  SRR4302540.6751194/94‑1 (MQ=60)
           CTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGACATCGCATGAAAGAAG                                                                                    >  SRR4302540.3788257/1‑94 (MQ=60)
            TATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGT                                                                                   >  SRR4302540.821945/1‑94 (MQ=60)
            TATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGT                                                                                   <  SRR4302540.1360848/94‑1 (MQ=60)
            TATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGT                                                                                   <  SRR4302540.5411088/94‑1 (MQ=60)
              TTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCG                                                                                 >  SRR4302540.3949819/1‑94 (MQ=60)
              TTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCG                                                                                 <  SRR4302540.7154286/94‑1 (MQ=60)
               TACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAACTTTATCTTTCTCAGAAGCCATCGCATGAAAGAAGTCGA                                                                                >  SRR4302540.1191632/1‑94 (MQ=60)
               TACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGA                                                                                >  SRR4302540.660559/1‑94 (MQ=60)
               TACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGA                                                                                <  SRR4302540.2677502/94‑1 (MQ=60)
                ACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAA                                                                               >  SRR4302540.5375176/1‑94 (MQ=60)
                  AATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAA                                                                             >  SRR4302540.4673858/1‑94 (MQ=60)
                   ATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAA                                                                            >  SRR4302540.8153952/1‑94 (MQ=60)
                   ATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAA                                                                            >  SRR4302540.8024154/1‑94 (MQ=60)
                   ATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAA                                                                            >  SRR4302540.8024155/1‑94 (MQ=60)
                   ATGTCATTAGTTGTGAACAAAGCAACTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAA                                                                            <  SRR4302540.7662633/94‑1 (MQ=60)
                    TGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAA                                                                           <  SRR4302540.9244118/94‑1 (MQ=60)
                    TGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAA                                                                           >  SRR4302540.94836/1‑94 (MQ=60)
                      TCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAAC                                                                         >  SRR4302540.1700314/1‑94 (MQ=60)
                      TCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAAC                                                                         <  SRR4302540.368823/94‑1 (MQ=60)
                      TCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAAC                                                                         <  SRR4302540.5036032/94‑1 (MQ=60)
                      TCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAAC                                                                         >  SRR4302540.1207681/1‑94 (MQ=60)
                      TCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAAC                                                                         >  SRR4302540.227619/1‑94 (MQ=60)
                       CATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACG                                                                        >  SRR4302540.4047953/1‑94 (MQ=60)
                        ATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGA                                                                       >  SRR4302540.2382685/1‑94 (MQ=60)
                        ATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGA                                                                       <  SRR4302540.2316325/94‑1 (MQ=60)
                         TTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAA                                                                      >  SRR4302540.8536689/1‑94 (MQ=60)
                          TAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAA                                                                     <  SRR4302540.791658/94‑1 (MQ=60)
                           AGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAT                                                                    <  SRR4302540.8118667/94‑1 (MQ=60)
                           AGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAT                                                                    <  SRR4302540.2680524/94‑1 (MQ=60)
                           AGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAT                                                                    <  SRR4302540.3255574/94‑1 (MQ=60)
                           AGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAT                                                                    >  SRR4302540.1244223/1‑94 (MQ=60)
                            GTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATAAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATC                                                                   >  SRR4302540.6713474/1‑94 (MQ=60)
                             GTGTGGACAAAGCACCTGGTCGCGCATACTAGGAGCTAGAAATTTATCTTTATCAGAAGCCATCGCATGAAAAAAGTCGAAAAAAACGAAATCA                                                                  <  SRR4302540.6492763/94‑1 (MQ=60)
                              TGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAA                                                                 <  SRR4302540.2897612/94‑1 (MQ=60)
                              TGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAA                                                                 <  SRR4302540.2806806/94‑1 (MQ=60)
                              TGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAA                                                                 <  SRR4302540.2360322/94‑1 (MQ=60)
                              TGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAA                                                                 >  SRR4302540.5378425/1‑94 (MQ=60)
                              TGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAA                                                                 <  SRR4302540.8986700/94‑1 (MQ=60)
                               GTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAA                                                                <  SRR4302540.5944759/94‑1 (MQ=60)
                               GTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAA                                                                >  SRR4302540.7685759/1‑94 (MQ=60)
                               GTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAA                                                                <  SRR4302540.9864238/94‑1 (MQ=60)
                               GTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAA                                                                >  SRR4302540.4384853/1‑94 (MQ=60)
                                TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC                                                               <  SRR4302540.8554163/94‑1 (MQ=60)
                                TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC                                                               <  SRR4302540.4445306/94‑1 (MQ=60)
                                TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC                                                               <  SRR4302540.8554164/94‑1 (MQ=60)
                                TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC                                                               <  SRR4302540.2989798/94‑1 (MQ=60)
                                 GAACAAAGCACCTGGTCGCGCATACTAGTGTCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACG                                                              <  SRR4302540.4893910/94‑1 (MQ=60)
                                 GAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACG                                                              <  SRR4302540.6756774/94‑1 (MQ=60)
                                 GAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACG                                                              <  SRR4302540.1004402/94‑1 (MQ=60)
                                 GAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACG                                                              <  SRR4302540.8236160/94‑1 (MQ=60)
                                    CAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCT                                                           <  SRR4302540.6641726/94‑1 (MQ=60)
                                    CAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCT                                                           <  SRR4302540.7267790/94‑1 (MQ=60)
                                    CAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCT                                                           >  SRR4302540.4668819/1‑94 (MQ=60)
                                    CAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCT                                                           >  SRR4302540.7730054/1‑94 (MQ=60)
                                     AAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTC                                                          >  SRR4302540.4103549/1‑94 (MQ=60)
                                     AAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTC                                                          <  SRR4302540.5887738/94‑1 (MQ=60)
                                     AAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTC                                                          >  SRR4302540.1166699/1‑94 (MQ=60)
                                     AAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTC                                                          >  SRR4302540.1688420/1‑94 (MQ=60)
                                     AAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTC                                                          >  SRR4302540.4059225/1‑94 (MQ=60)
                                      AAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCA                                                         <  SRR4302540.1082865/94‑1 (MQ=60)
                                      AAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCA                                                         >  SRR4302540.2408527/1‑94 (MQ=60)
                                       AGCACCTGGTCGCGCATACTAGGGGCTATATATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAG                                                        <  SRR4302540.7459613/94‑1 (MQ=60)
                                       AGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAG                                                        <  SRR4302540.7778924/94‑1 (MQ=60)
                                       AGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAG                                                        <  SRR4302540.3990760/94‑1 (MQ=60)
                                       AGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAG                                                        >  SRR4302540.5226702/1‑94 (MQ=60)
                                       AGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAG                                                        <  SRR4302540.820832/94‑1 (MQ=60)
                                       AGCACCTGGTCGCGCATACTAGGGGCTATAAATTAATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACACCTCAG                                                        <  SRR4302540.1802388/94‑1 (MQ=60)
                                        GCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGC                                                       >  SRR4302540.7640896/1‑94 (MQ=60)
                                        GCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGC                                                       <  SRR4302540.6916244/94‑1 (MQ=60)
                                        GCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGC                                                       <  SRR4302540.2892133/94‑1 (MQ=60)
                                         CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG                                                      >  SRR4302540.1006061/1‑94 (MQ=60)
                                          ACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGA                                                     <  SRR4302540.5983155/94‑1 (MQ=60)
                                          ACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGA                                                     >  SRR4302540.1444742/1‑94 (MQ=60)
                                           CCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGAT                                                    >  SRR4302540.5765477/1‑94 (MQ=60)
                                           CCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGAT                                                    <  SRR4302540.9068154/94‑1 (MQ=60)
                                            CTGTTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAATAAAACGAAATCAAACGCCTCAGCGATC                                                   >  SRR4302540.6551502/1‑94 (MQ=60)
                                            CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC                                                   <  SRR4302540.2263055/94‑1 (MQ=60)
                                            CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC                                                   >  SRR4302540.582173/1‑94 (MQ=60)
                                            CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC                                                   <  SRR4302540.3228096/94‑1 (MQ=60)
                                            CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC                                                   <  SRR4302540.7609263/94‑1 (MQ=60)
                                            CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC                                                   <  SRR4302540.889087/94‑1 (MQ=60)
                                                TCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCT                                               <  SRR4302540.5580896/94‑1 (MQ=60)
                                                 CGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTG                                              >  SRR4302540.434180/1‑94 (MQ=60)
                                                 CGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTG                                              <  SRR4302540.4821159/94‑1 (MQ=60)
                                                   CGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGA                                            >  SRR4302540.896706/1‑94 (MQ=60)
                                                    GCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGAC                                           <  SRR4302540.9937326/94‑1 (MQ=60)
                                                    GCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGAC                                           <  SRR4302540.7102261/94‑1 (MQ=60)
                                                    GCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGAC                                           <  SRR4302540.2069289/94‑1 (MQ=60)
                                                    GCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGAC                                           >  SRR4302540.3600639/1‑94 (MQ=60)
                                                    GCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGAC                                           <  SRR4302540.516196/94‑1 (MQ=60)
                                                    GCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGAC                                           <  SRR4302540.5761183/94‑1 (MQ=60)
                                                     CATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACG                                          <  SRR4302540.4193609/94‑1 (MQ=60)
                                                     CATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACG                                          <  SRR4302540.3513588/94‑1 (MQ=60)
                                                     CATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACG                                          >  SRR4302540.7751395/1‑94 (MQ=60)
                                                     CATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACG                                          >  SRR4302540.5315151/1‑94 (MQ=60)
                                                      ATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGC                                         >  SRR4302540.2229646/1‑94 (MQ=60)
                                                      ATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGC                                         >  SRR4302540.7376218/1‑94 (MQ=60)
                                                       TACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCC                                        >  SRR4302540.567724/1‑94 (MQ=60)
                                                       TACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCC                                        >  SRR4302540.1455134/1‑94 (MQ=60)
                                                         CTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAT                                      <  SRR4302540.811606/94‑1 (MQ=60)
                                                         CTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAT                                      <  SRR4302540.2684940/94‑1 (MQ=60)
                                                         CTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAT                                      <  SRR4302540.7154462/94‑1 (MQ=60)
                                                         CTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAC                                      >  SRR4302540.8352096/1‑94 (MQ=60)
                                                           AGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCC                                    >  SRR4302540.2720807/1‑94 (MQ=60)
                                                           AGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCC                                    <  SRR4302540.4919576/94‑1 (MQ=60)
                                                            GGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCG                                   <  SRR4302540.6625309/94‑1 (MQ=60)
                                                            GGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCG                                   <  SRR4302540.5541599/94‑1 (MQ=60)
                                                            GGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCG                                   <  SRR4302540.6106818/94‑1 (MQ=60)
                                                            GGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCG                                   >  SRR4302540.5060771/1‑94 (MQ=60)
                                                             GGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGC                                  >  SRR4302540.9216424/1‑94 (MQ=60)
                                                              GGCTATAACTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAACAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCC                                 >  SRR4302540.6480402/1‑94 (MQ=60)
                                                              GGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACACCTCAGCGATCGCCTGGACGCCATCCGCC                                 >  SRR4302540.9883362/1‑94 (MQ=60)
                                                               GCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCA                                >  SRR4302540.4015271/1‑94 (MQ=60)
                                                               GCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCA                                <  SRR4302540.875963/94‑1 (MQ=60)
                                                                CTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCAC                               >  SRR4302540.4564270/1‑94 (MQ=60)
                                                                CTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCAC                               >  SRR4302540.3150024/1‑94 (MQ=60)
                                                                 TATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACC                              >  SRR4302540.10122206/1‑94 (MQ=60)
                                                                 TATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACC                              >  SRR4302540.10122207/1‑94 (MQ=60)
                                                                  ATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCA                             >  SRR4302540.4389692/1‑94 (MQ=60)
                                                                  ATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCA                             <  SRR4302540.5842584/94‑1 (MQ=60)
                                                                  ATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCA                             >  SRR4302540.4020378/1‑94 (MQ=60)
                                                                  ATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCA                             >  SRR4302540.642556/1‑94 (MQ=60)
                                                                  ATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCA                             >  SRR4302540.8365068/1‑94 (MQ=60)
                                                                   TAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAG                            <  SRR4302540.328593/94‑1 (MQ=60)
                                                                    AAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGC                           >  SRR4302540.1353286/1‑94 (MQ=60)
                                                                       TTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGG                        <  SRR4302540.2997407/94‑1 (MQ=60)
                                                                       TTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATAGCCTGGCCGCCATCCCCCCCCAGCAGG                        >  SRR4302540.8231051/1‑94 (MQ=60)
                                                                        TTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGC                       >  SRR4302540.235490/1‑94 (MQ=60)
                                                                        TTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGC                       <  SRR4302540.7212084/94‑1 (MQ=60)
                                                                         TATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCC                      <  SRR4302540.1175967/94‑1 (MQ=60)
                                                                         TATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCC                      <  SRR4302540.6320794/94‑1 (MQ=60)
                                                                           TCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGA                    >  SRR4302540.2333807/1‑94 (MQ=60)
                                                                            CTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGAT                   >  SRR4302540.7925913/1‑94 (MQ=60)
                                                                              TTATCAGAAGCCATCGCATGAAAGAAGACGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCT                 <  SRR4302540.5737800/94‑1 (MQ=60)
                                                                                ATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTC               >  SRR4302540.7949140/1‑94 (MQ=60)
                                                                                 TCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTC              <  SRR4302540.1930793/94‑1 (MQ=60)
                                                                                 TCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTC              <  SRR4302540.1123929/94‑1 (MQ=60)
                                                                                 TCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTC              <  SRR4302540.361994/94‑1 (MQ=60)
                                                                                 TCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTC              >  SRR4302540.205535/1‑94 (MQ=60)
                                                                                  CAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCG             <  SRR4302540.7841522/94‑1 (MQ=60)
                                                                                  CAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCG             >  SRR4302540.1586178/1‑94 (MQ=60)
                                                                                   AGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGC            >  SRR4302540.5713308/1‑94 (MQ=60)
                                                                                   AGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGC            >  SRR4302540.10058723/1‑94 (MQ=60)
                                                                                   AGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGC            <  SRR4302540.9121123/94‑1 (MQ=60)
                                                                                    GAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCT           <  SRR4302540.2486609/94‑1 (MQ=60)
                                                                                    GAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCT           <  SRR4302540.3588835/94‑1 (MQ=60)
                                                                                     AAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTG          <  SRR4302540.9766816/94‑1 (MQ=60)
                                                                                     AAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTG          >  SRR4302540.5417175/1‑94 (MQ=60)
                                                                                     AAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTG          >  SRR4302540.6817022/1‑94 (MQ=60)
                                                                                     AAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTG          <  SRR4302540.8665885/94‑1 (MQ=60)
                                                                                      AGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGG         <  SRR4302540.5828763/94‑1 (MQ=60)
                                                                                       GCCATCGCATGAAAGAAGTCGAAAAACACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCCGCAGGGCGATCTTccgtcggt        >  SRR4302540.4282042/1‑86 (MQ=60)
                                                                                       GCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGT        >  SRR4302540.4282043/1‑94 (MQ=60)
                                                                                        CCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTT       <  SRR4302540.2207790/94‑1 (MQ=60)
                                                                                        CCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTT       <  SRR4302540.3507814/94‑1 (MQ=60)
                                                                                        CCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTT       <  SRR4302540.618348/94‑1 (MQ=60)
                                                                                         CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGTTGGTTG      >  SRR4302540.7862229/1‑94 (MQ=60)
                                                                                         CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG      >  SRR4302540.7862228/1‑94 (MQ=60)
                                                                                         CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG      >  SRR4302540.3759290/1‑94 (MQ=60)
                                                                                         CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG      >  SRR4302540.7176941/1‑94 (MQ=60)
                                                                                         CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG      >  SRR4302540.9783529/1‑94 (MQ=60)
                                                                                         CATCGCATAAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGCCGGCATACGGCACCAGCCGGCCGATCTTTCGCTGGTCG      >  SRR4302540.3759288/1‑94 (MQ=60)
                                                                                          ATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGA     >  SRR4302540.6084723/1‑94 (MQ=60)
                                                                                          ATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGA     >  SRR4302540.6182848/1‑94 (MQ=60)
                                                                                          ATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGA     >  SRR4302540.7835761/1‑94 (MQ=60)
                                                                                          ATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGA     <  SRR4302540.2384097/94‑1 (MQ=60)
                                                                                           TCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAA    <  SRR4302540.9585748/94‑1 (MQ=60)
                                                                                           TCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAA    <  SRR4302540.6518258/94‑1 (MQ=60)
                                                                                            CGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAG   <  SRR4302540.7038729/94‑1 (MQ=60)
                                                                                            CGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAG   >  SRR4302540.6182948/1‑94 (MQ=60)
                                                                                             GCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGC  >  SRR4302540.1276887/1‑94 (MQ=60)
                                                                                             |                                                                                             
ACGTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGC  >  NC_000913/3774197‑3774383

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: