Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,774,290 |
A→G |
intergenic (‑283/‑2) |
b4550 ← / → yibL |
hypothetical protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,774,290 | 0 | A | G | 100.0%
| 639.9
/ NA
| 197 | intergenic (‑283/‑2) | b4550/yibL | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (119/78); total (119/78) |
Only 100 of 202 total aligned reads displayed.
TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG > NC_000913/3774200‑3774379
|
tACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAt > 2:5363199/1‑93 (MQ=255)
tACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAt < 1:668347/93‑1 (MQ=255)
tACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAt > 2:2985389/1‑93 (MQ=255)
tACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCAt > 2:2774558/1‑93 (MQ=255)
cAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGa < 1:5016713/93‑1 (MQ=255)
cAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGa > 1:5258773/1‑93 (MQ=255)
aGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGaa > 2:4941346/1‑93 (MQ=255)
aCTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaaga > 1:5500243/1‑93 (MQ=255)
aCTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaaga > 2:1994184/1‑93 (MQ=255)
cTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaa < 2:1822009/93‑1 (MQ=255)
tATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaag < 2:3361906/93‑1 (MQ=255)
aTTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGt > 1:570301/1‑93 (MQ=255)
ttACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTc > 2:4123226/1‑93 (MQ=255)
ttACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTc > 2:5179346/1‑93 (MQ=255)
ttACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTc < 1:3450419/93‑1 (MQ=255)
aCAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGa > 1:71993/1‑93 (MQ=255)
aCAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGa < 1:2533535/93‑1 (MQ=255)
cAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaa < 1:1136128/93‑1 (MQ=255)
cAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaa < 1:1206446/93‑1 (MQ=255)
aaTGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaa > 2:1314364/1‑93 (MQ=255)
aTGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaa > 1:6000615/1‑93 (MQ=255)
tCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaaaa > 2:1412736/1‑93 (MQ=255)
tCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaaaa > 2:4591087/1‑93 (MQ=255)
cATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAAc < 2:4450304/93‑1 (MQ=255)
cATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAAc > 2:5505762/1‑93 (MQ=255)
ttAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGa > 2:3780697/1‑93 (MQ=255)
tAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaa > 2:2392713/1‑93 (MQ=255)
tAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaa > 1:609090/1‑93 (MQ=255)
tAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaa > 1:2384694/1‑93 (MQ=255)
aGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaaa > 2:2635889/1‑93 (MQ=255)
gTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGGAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAt > 1:4801238/1‑93 (MQ=255)
gtgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaa < 2:2209344/93‑1 (MQ=255)
tgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaaa < 1:2029918/93‑1 (MQ=255)
tgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaaa < 2:1253429/93‑1 (MQ=255)
tgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaaa < 2:646180/93‑1 (MQ=255)
gAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAc < 1:3408892/93‑1 (MQ=255)
gAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAc > 2:3052776/1‑93 (MQ=255)
aaGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTc > 2:5161524/1‑93 (MQ=255)
aGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCa < 1:615882/93‑1 (MQ=255)
gCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAg > 2:1143756/1‑93 (MQ=255)
gCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAg > 2:3494078/1‑93 (MQ=255)
cACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGc < 1:2217763/93‑1 (MQ=255)
cACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGc < 2:5261288/93‑1 (MQ=255)
cACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGc < 2:5889248/93‑1 (MQ=255)
aCCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCg > 1:1974476/1‑93 (MQ=255)
aCCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCg > 1:1045544/1‑93 (MQ=255)
ccTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGa < 1:819352/93‑1 (MQ=255)
ccTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGa > 1:4874383/1‑93 (MQ=255)
cTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGAt < 1:13682/93‑1 (MQ=255)
cTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGAt < 1:3467441/93‑1 (MQ=255)
cTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGAt > 1:4310483/1‑93 (MQ=255)
tGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATc > 1:1453432/1‑93 (MQ=255)
ggTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCg < 1:896649/93‑1 (MQ=255)
tCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGcc > 2:1778844/1‑93 (MQ=255)
tCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGcc < 1:5130642/93‑1 (MQ=255)
gcgcATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTg < 1:2905340/93‑1 (MQ=255)
cgcATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTgg > 2:3398357/1‑93 (MQ=255)
gcATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGa < 1:1735053/93‑1 (MQ=255)
aTACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTCGACg > 2:80650/1‑93 (MQ=255)
tACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGc > 1:4513468/1‑93 (MQ=255)
aCTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGcc < 2:748415/93‑1 (MQ=255)
cTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCa > 1:2347758/1‑93 (MQ=255)
tAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAt < 1:5787452/93‑1 (MQ=255)
tAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAt > 2:4012994/1‑93 (MQ=255)
aGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATc > 2:1911318/1‑93 (MQ=255)
aGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATc < 1:3862122/93‑1 (MQ=255)
ggggCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATcc > 2:620458/1‑93 (MQ=255)
ggCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGc < 1:2447149/93‑1 (MQ=255)
tataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccac > 1:3360070/1‑93 (MQ=255)
ataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacc > 1:492062/1‑93 (MQ=255)
ataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacc > 1:553940/1‑93 (MQ=255)
ataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacc > 2:4733370/1‑93 (MQ=255)
aaaTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcag > 2:2613519/1‑93 (MQ=255)
aTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagca < 2:899376/93‑1 (MQ=255)
aTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagca > 2:4198901/1‑93 (MQ=255)
tttatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagcag < 1:5153046/93‑1 (MQ=255)
tttatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagcag < 2:5076855/93‑1 (MQ=255)
ttatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAgg > 1:5591199/1‑93 (MQ=255)
tatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGc > 1:3247436/1‑93 (MQ=255)
tatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGAAGCCATCGGCCACCAGCAGGc > 2:1933177/1‑93 (MQ=255)
tcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCttt > 1:3724480/1‑93 (MQ=255)
cAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTc < 1:3569424/93‑1 (MQ=255)
cAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTc < 2:3954479/93‑1 (MQ=255)
aGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCg > 1:3685942/1‑93 (MQ=255)
gAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGc > 2:4777166/1‑93 (MQ=255)
gAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGc > 1:1577203/1‑93 (MQ=255)
gAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGc < 2:1075611/93‑1 (MQ=255)
gAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGc > 1:272638/1‑93 (MQ=255)
aaGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCt < 2:6251919/93‑1 (MQ=255)
aaGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCt > 1:1685586/1‑93 (MQ=255)
aGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTg > 2:2162683/1‑93 (MQ=255)
aGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTg < 1:4674615/93‑1 (MQ=255)
gCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTgg < 2:1469869/93‑1 (MQ=255)
gCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTgg > 2:2102113/1‑93 (MQ=255)
gCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCACTgg > 2:4684443/1‑93 (MQ=255)
ccATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGt < 1:3919033/93‑1 (MQ=255)
cATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTCGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGtt > 1:3001432/1‑93 (MQ=255)
aTCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTg > 2:4637775/1‑93 (MQ=255)
aTCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTg > 2:4328705/1‑93 (MQ=255)
aTCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTg > 1:5683653/1‑93 (MQ=255)
|
TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG > NC_000913/3774200‑3774379
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAG > NC_000913/3774197‑3774382
|
ACGTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCG < SRR4302533.4594746/94‑1 (MQ=60)
CGTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGC < SRR4302533.1335270/94‑1 (MQ=60)
GTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCA < SRR4302533.2063556/94‑1 (MQ=60)
GTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCA > SRR4302533.5839497/1‑94 (MQ=60)
TACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATG < SRR4302533.672297/94‑1 (MQ=60)
TACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATG < SRR4302533.4395395/94‑1 (MQ=60)
ACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGA > SRR4302533.5290348/1‑94 (MQ=60)
CAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAA < SRR4302533.5047105/94‑1 (MQ=60)
AGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAA > SRR4302533.4977779/1‑94 (MQ=60)
AGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAA < SRR4302533.4686299/94‑1 (MQ=60)
AACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGA > SRR4302533.5533422/1‑94 (MQ=60)
ACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAA < SRR4302533.1604053/94‑1 (MQ=60)
ACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAA < SRR4302533.6064320/94‑1 (MQ=60)
TATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGT > SRR4302533.573669/1‑94 (MQ=60)
TTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCG < SRR4302533.3471724/94‑1 (MQ=60)
TACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGA > SRR4302533.72455/1‑94 (MQ=60)
ACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAA < SRR4302533.2549134/94‑1 (MQ=60)
ACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAA > SRR4302533.5107542/1‑94 (MQ=60)
ACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAA < SRR4302533.721504/94‑1 (MQ=60)
CAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAA > SRR4302533.1089619/1‑94 (MQ=60)
CAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAA < SRR4302533.1142882/94‑1 (MQ=60)
CAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAA < SRR4302533.1213692/94‑1 (MQ=60)
AATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAA > SRR4302533.6036964/1‑94 (MQ=60)
ATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAA > SRR4302533.737205/1‑94 (MQ=60)
ATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAA > SRR4302533.894458/1‑94 (MQ=60)
GTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAA > SRR4302533.2933256/1‑94 (MQ=60)
CATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACG > SRR4302533.4151624/1‑94 (MQ=60)
TTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAA > SRR4302533.1457482/1‑94 (MQ=60)
TTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAA > SRR4302533.2399433/1‑94 (MQ=60)
TTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAA > SRR4302533.889375/1‑94 (MQ=60)
TTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAA > SRR4302533.612674/1‑94 (MQ=60)
TAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAA < SRR4302533.3863834/94‑1 (MQ=60)
AGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGGAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAT > SRR4302533.4830318/1‑94 (MQ=60)
AGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAT < SRR4302533.3366619/94‑1 (MQ=60)
GTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATC > SRR4302533.5603119/1‑94 (MQ=60)
TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC < SRR4302533.4765483/94‑1 (MQ=60)
TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC < SRR4302533.5765243/94‑1 (MQ=60)
TGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAC < SRR4302533.2042447/94‑1 (MQ=60)
GAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACG < SRR4302533.3429950/94‑1 (MQ=60)
AACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGC > SRR4302533.3903478/1‑94 (MQ=60)
AACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGC < SRR4302533.2454692/94‑1 (MQ=60)
AAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTC > SRR4302533.5195934/1‑94 (MQ=60)
AAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCA < SRR4302533.3479928/94‑1 (MQ=60)
AGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAG < SRR4302533.619500/94‑1 (MQ=60)
CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG > SRR4302533.1986565/1‑94 (MQ=60)
CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG < SRR4302533.5412474/94‑1 (MQ=60)
CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG > SRR4302533.1051690/1‑94 (MQ=60)
CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG < SRR4302533.2231453/94‑1 (MQ=60)
CACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCG > SRR4302533.5727377/1‑94 (MQ=60)
ACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGA > SRR4302533.4903915/1‑94 (MQ=60)
ACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGA > SRR4302533.1520136/1‑94 (MQ=60)
CCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGAT > SRR4302533.4336432/1‑94 (MQ=60)
CCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGAT < SRR4302533.824155/94‑1 (MQ=60)
CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC > SRR4302533.13761/1‑94 (MQ=60)
CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC > SRR4302533.1995849/1‑94 (MQ=60)
CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC < SRR4302533.13784/94‑1 (MQ=60)
CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC < SRR4302533.3488843/94‑1 (MQ=60)
CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC > SRR4302533.1462199/1‑94 (MQ=60)
CTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATC > SRR4302533.656169/1‑94 (MQ=60)
GGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGC < SRR4302533.901913/94‑1 (MQ=60)
TCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCT < SRR4302533.5161635/94‑1 (MQ=60)
GCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGG < SRR4302533.2923183/94‑1 (MQ=60)
GCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGAC < SRR4302533.1745579/94‑1 (MQ=60)
ATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGC > SRR4302533.4540802/1‑94 (MQ=60)
ACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCA > SRR4302533.2362285/1‑94 (MQ=60)
ACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCA < SRR4302533.3406732/94‑1 (MQ=60)
CTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAT > SRR4302533.3691090/1‑94 (MQ=60)
CTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAT > SRR4302533.2375151/1‑94 (MQ=60)
TAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATC < SRR4302533.5822414/94‑1 (MQ=60)
AGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCC < SRR4302533.3885697/94‑1 (MQ=60)
AGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCC > SRR4302533.1718871/1‑94 (MQ=60)
GGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCG > SRR4302533.517958/1‑94 (MQ=60)
GGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCG > SRR4302533.978116/1‑94 (MQ=60)
GGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCC < SRR4302533.2462250/94‑1 (MQ=60)
CTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCAC > SRR4302533.3380829/1‑94 (MQ=60)
TATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACC > SRR4302533.495003/1‑94 (MQ=60)
TATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACC > SRR4302533.557224/1‑94 (MQ=60)
ATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCA > SRR4302533.5654311/1‑94 (MQ=60)
TAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAG > SRR4302533.116164/1‑94 (MQ=60)
AATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCGTCAGCGATCGCCTGGACGCCATCCGCCACCAGCA > SRR4302533.6172475/1‑94 (MQ=60)
ATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAG < SRR4302533.3744975/94‑1 (MQ=60)
ATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAG > SRR4302533.554958/1‑94 (MQ=60)
ATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAG > SRR4302533.3433691/1‑94 (MQ=60)
TTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGG < SRR4302533.5184172/94‑1 (MQ=60)
TTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGG > SRR4302533.5624975/1‑94 (MQ=60)
TTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGC > SRR4302533.3118063/1‑94 (MQ=60)
TTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGC > SRR4302533.3267463/1‑94 (MQ=60)
ATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCG > SRR4302533.2277589/1‑94 (MQ=60)
ATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCG > SRR4302533.3511903/1‑94 (MQ=60)
TCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGA > SRR4302533.2512448/1‑94 (MQ=60)
TTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATC < SRR4302533.1778135/94‑1 (MQ=60)
TTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATTGCCTGGACGCCATCCGCCACCAGCAGGCCGATCT > SRR4302533.4943737/1‑94 (MQ=60)
ATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTT > SRR4302533.3747330/1‑94 (MQ=60)
CAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCG < SRR4302533.3591424/94‑1 (MQ=60)
CAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCG > SRR4302533.3708597/1‑94 (MQ=60)
AGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGC > SRR4302533.274297/1‑94 (MQ=60)
AGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGC > SRR4302533.1586700/1‑94 (MQ=60)
GAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCT > SRR4302533.1695800/1‑94 (MQ=60)
AAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTG < SRR4302533.2737727/94‑1 (MQ=60)
AGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGG < SRR4302533.4702940/94‑1 (MQ=60)
GCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGT > SRR4302533.2149333/1‑94 (MQ=60)
CCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTT < SRR4302533.4835085/94‑1 (MQ=60)
CCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTT < SRR4302533.3942966/94‑1 (MQ=60)
CCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTCGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTT > SRR4302533.3019787/1‑94 (MQ=60)
CATCGCATGAAAGAAGTGGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG > SRR4302533.2816712/1‑94 (MQ=60)
CATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG > SRR4302533.5717987/1‑94 (MQ=60)
ATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGA > SRR4302533.1296097/1‑94 (MQ=60)
CGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAG > SRR4302533.2828949/1‑94 (MQ=60)
CGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAG < SRR4302533.4306544/94‑1 (MQ=60)
|
ACGTTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAG > NC_000913/3774197‑3774382
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
