Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,776,340	G→A	G439S (GGT→AGT)	lldP →	L‑lactate permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,776,340	0	G	A	99.2%	1420.4 / ‑3.6	386	G439S (GGT→AGT)	lldP	L‑lactate permease
Reads supporting (aligned to +/- strand): ref base G (2/1); new base A (205/178); total (207/179)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.47e-01

Only 100 of 394 total aligned reads displayed.

ATCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCGGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGCC  >  NC_000913/3776250‑3776429

 tCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTc                                                                                        >  2:345655/1‑93 (MQ=255)

 tCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTc                                                                                        >  1:9749007/1‑93 (MQ=255)

 tCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTc                                                                                        >  2:5457029/1‑93 (MQ=255)

 tCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTc                                                                                        >  2:5822229/1‑93 (MQ=255)

  cTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCa                                                                                       <  1:5581534/93‑1 (MQ=255)

  cTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTGCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCa                                                                                       <  2:4789974/93‑1 (MQ=255)

   tACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCAt                                                                                      >  1:8375621/1‑93 (MQ=255)

   tACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCAt                                                                                      >  2:6686251/1‑93 (MQ=255)

      tCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCAGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCa                                                                                   <  1:624889/93‑1 (MQ=255)

       ccATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCAt                                                                                  <  1:2861101/93‑1 (MQ=255)

       ccATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCAt                                                                                  <  2:7654629/93‑1 (MQ=255)

         aTCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTc                                                                                >  2:3248835/1‑93 (MQ=255)

          tCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTcc                                                                               >  1:4024782/1‑92 (MQ=255)

            ggTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCAcc                                                                             >  1:8687805/1‑93 (MQ=255)

             gTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACct                                                                            <  2:8649698/93‑1 (MQ=255)

              tATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACctt                                                                           >  2:9172651/1‑93 (MQ=255)

              tATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACctt                                                                           >  1:4417424/1‑93 (MQ=255)

               aTGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACcttc                                                                          <  2:1579824/93‑1 (MQ=255)

               aTGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACcttc                                                                          <  2:9240174/93‑1 (MQ=255)

               aTGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACcttc                                                                          >  2:7864074/1‑93 (MQ=255)

                tGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGCCTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACcttct                                                                         >  1:3564664/1‑93 (MQ=255)

                tGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACcttct                                                                         >  1:7383094/1‑93 (MQ=255)

                tGGTGCGAGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCGGTCATGCATTCACcttct                                                                         <  1:3435030/93‑1 (MQ=255)

                 ggTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACcttctt                                                                        >  1:4264311/1‑93 (MQ=255)

                   tGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTtcttct                                                                      <  1:2338512/93‑1 (MQ=255)

                   tGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTtcttct                                                                      >  2:5294126/1‑93 (MQ=255)

                   tGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTtcttct                                                                      >  2:3087554/1‑93 (MQ=255)

                   tGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTtcttct                                                                      <  1:6565047/93‑1 (MQ=255)

                    gCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTtctc                                                                     <  1:8838577/93‑1 (MQ=255)

                     cTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCg                                                                    >  2:3630905/1‑93 (MQ=255)

                      tGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGc                                                                   <  2:8471280/93‑1 (MQ=255)

                        gCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCg                                                                 >  2:9398672/1‑93 (MQ=255)

                         cATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGt                                                                >  1:273622/1‑93 (MQ=255)

                          aTTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGtt                                                               >  2:6924024/1‑93 (MQ=255)

                           ttCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTc                                                              >  1:5283847/1‑93 (MQ=255)

                           ttCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTc                                                              >  1:7660886/1‑93 (MQ=255)

                           ttCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTc                                                              >  2:9568670/1‑93 (MQ=255)

                            tCGCCTTTATTTCGAACTATTCCGGACTGGCATCAGCCCTGGCGCTGGCCCTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTcc                                                             <  1:4966809/93‑1 (MQ=255)

                             cGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCt                                                            <  1:6076123/93‑1 (MQ=255)

                              gCCTTTATTTCGAACTATTCCGGACTGTCATCAAGACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTc                                                           >  1:4786168/1‑93 (MQ=255)

                              gCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTc                                                           <  1:5760632/93‑1 (MQ=255)

                              gCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTc                                                           <  1:1432671/93‑1 (MQ=255)

                                cTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCgg                                                         >  1:7005540/1‑93 (MQ=255)

                                cTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCgg                                                         >  1:7521885/1‑93 (MQ=255)

                                cTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCgg                                                         >  1:485880/1‑93 (MQ=255)

                                 tttATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCggc                                                        >  2:2830965/1‑93 (MQ=255)

                                 tttATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCggc                                                        <  1:9394278/93‑1 (MQ=255)

                                  ttATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCggct                                                       >  1:9128598/1‑93 (MQ=255)

                                  ttATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCggct                                                       >  2:7399682/1‑93 (MQ=255)

                                   tATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCggctg                                                      <  1:641920/93‑1 (MQ=255)

                                    aTTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCggctgg                                                     <  1:9172652/93‑1 (MQ=255)

                                     tttCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCggctggc                                                    >  2:2153923/1‑93 (MQ=255)

                                     tttCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCggctggc                                                    <  2:4969336/93‑1 (MQ=255)

                                     tttCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCggctggc                                                    <  2:7056278/93‑1 (MQ=255)

                                      ttCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCggctggct                                                   >  1:4502516/1‑93 (MQ=255)

                                        cGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGctggctgg                                                 <  2:4924830/93‑1 (MQ=255)

                                          aaCTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGATGGCTgggg                                               >  1:10005015/1‑93 (MQ=255)

                                           aCTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTggggg                                              >  2:9942369/1‑93 (MQ=255)

                                           aCTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTggggg                                              >  2:1300068/1‑93 (MQ=255)

                                            cTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCCTGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTgggggg                                             >  2:6810272/1‑92 (MQ=255)

                                             tATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTa                                            >  1:9487035/1‑93 (MQ=255)

                                               ttCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTAtt                                          <  2:5674413/93‑1 (MQ=255)

                                                tCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTAtgc                                         >  2:7935714/1‑91 (MQ=255)

                                                tCCGGACTGGCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTc                                         <  1:3288182/93‑1 (MQ=255)

                                                 ccGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTcc                                        <  1:1582278/93‑1 (MQ=255)

                                                 ccGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTcc                                        <  2:597152/93‑1 (MQ=255)

                                                  cGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCt                                       <  1:2990659/93‑1 (MQ=255)

                                                  cGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCt                                       >  2:8376236/1‑93 (MQ=255)

                                                  cGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCt                                       >  1:7990364/1‑93 (MQ=255)

                                                   ggACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGGATTCCTg                                      >  2:3922865/1‑93 (MQ=255)

                                                    gACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGa                                     <  2:6015382/93‑1 (MQ=255)

                                                       tGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCg                                  >  1:1289005/1‑93 (MQ=255)

                                                        gTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCgg                                 >  1:6157903/1‑93 (MQ=255)

                                                         tcatcaACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCggg                                <  2:8906606/93‑1 (MQ=255)

                                                         tcatcaACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTACCCggg                                >  1:7788683/1‑93 (MQ=255)

                                                          catcaACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGt                               <  2:3678699/93‑1 (MQ=255)

                                                            tcaACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCg                             >  1:25000/1‑93 (MQ=255)

                                                             caACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCgg                            <  2:7276889/93‑1 (MQ=255)

                                                              aaCACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGa                           <  1:8126652/93‑1 (MQ=255)

                                                               acacTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGAt                          >  2:2601417/1‑93 (MQ=255)

                                                                  cTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATAcc                       >  1:3780999/1‑93 (MQ=255)

                                                                   tGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCt                      >  2:1383337/1‑93 (MQ=255)

                                                                    ggCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTc                     <  2:9635423/93‑1 (MQ=255)

                                                                      cgcTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCAt                   <  2:10003851/93‑1 (MQ=255)

                                                                      cgcTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCAt                   <  1:8346179/93‑1 (MQ=255)

                                                                       gcTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATc                  >  2:4439255/1‑93 (MQ=255)

                                                                       gcTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATc                  <  2:1902595/93‑1 (MQ=255)

                                                                       gcTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATc                  <  2:4164305/93‑1 (MQ=255)

                                                                       gcTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATc                  <  1:9039301/93‑1 (MQ=255)

                                                                       gcTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATc                  >  2:629520/1‑93 (MQ=255)

                                                                           gCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAAc              <  2:8173638/93‑1 (MQ=255)

                                                                             aCTGGCGCACACCAGTCATGCATTCCCCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGc            <  1:1997542/93‑1 (MQ=255)

                                                                             aCTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGc            <  1:1928719/93‑1 (MQ=255)

                                                                             aCTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGc            >  1:5134785/1‑93 (MQ=255)

                                                                              cTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTTCTGACCGGGTCGGATACCTCATCTCACGcc           >  2:6429949/1‑93 (MQ=255)

                                                                              cTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGcc           <  1:9306828/93‑1 (MQ=255)

                                                                               tGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGccc          <  1:4713447/93‑1 (MQ=255)

                                                                                  cgcACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGt       <  1:6727618/93‑1 (MQ=255)

                                                                                     acacCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTcg    >  1:686558/1‑93 (MQ=255)

                                                                                      cacCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTcgc   >  1:1789087/1‑93 (MQ=255)

ATCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCGGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGCC  >  NC_000913/3776250‑3776429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 213 total aligned reads displayed.

CCATCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCGGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGCCGCG  >  NC_000913/3776248‑3776432

CCATCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAG                                                                                             >  SRR4302540.959812/1‑94 (MQ=60)

CCATCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAG                                                                                             >  SRR4302540.9396573/1‑94 (MQ=60)

 CATCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGT                                                                                            <  SRR4302540.842183/94‑1 (MQ=60)

  ATCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTC                                                                                           >  SRR4302540.9863412/1‑94 (MQ=60)

   TCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCA                                                                                          >  SRR4302540.8026457/1‑94 (MQ=60)

    CTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCAT                                                                                         <  SRR4302540.5642975/94‑1 (MQ=60)

    CTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCAT                                                                                         >  SRR4302540.8472816/1‑94 (MQ=60)

    CTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCAT                                                                                         <  SRR4302540.8128133/94‑1 (MQ=60)

    CTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCAT                                                                                         <  SRR4302540.3983032/94‑1 (MQ=60)

    CTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCAT                                                                                         >  SRR4302540.3225312/1‑94 (MQ=60)

     TACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATG                                                                                        <  SRR4302540.1809804/94‑1 (MQ=60)

       CTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCA                                                                                      >  SRR4302540.9011354/1‑94 (MQ=60)

        TCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCAT                                                                                     <  SRR4302540.7206733/94‑1 (MQ=60)

        TCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCAT                                                                                     >  SRR4302540.7686256/1‑94 (MQ=60)

        TCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCAT                                                                                     >  SRR4302540.1833007/1‑94 (MQ=60)

        TCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCAGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCAT                                                                                     <  SRR4302540.631538/94‑1 (MQ=60)

         CCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATT                                                                                    <  SRR4302540.2423914/94‑1 (MQ=60)

         CCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATT                                                                                    <  SRR4302540.2892119/94‑1 (MQ=60)

           ATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCC                                                                                  >  SRR4302540.4068172/1‑94 (MQ=60)

           ATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCA                                                                                  <  SRR4302540.467271/94‑1 (MQ=60)

            TCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCAC                                                                                 <  SRR4302540.1682324/94‑1 (MQ=60)

             CGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACC                                                                                <  SRR4302540.6883604/94‑1 (MQ=60)

             CGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACC                                                                                <  SRR4302540.9474186/94‑1 (MQ=60)

             CGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACC                                                                                <  SRR4302540.6603173/94‑1 (MQ=60)

             CGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACC                                                                                >  SRR4302540.8788681/1‑94 (MQ=60)

              GGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCT                                                                               >  SRR4302540.529151/1‑94 (MQ=60)

               GTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTTGAGCTGGCACTGGCGCACACCAGTCATGCCTTCACCTC                                                                              >  SRR4302540.4379805/1‑94 (MQ=60)

               GTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTT                                                                              >  SRR4302540.1368762/1‑94 (MQ=60)

               GTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTT                                                                              >  SRR4302540.3521152/1‑94 (MQ=60)

               GTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTT                                                                              >  SRR4302540.4465288/1‑94 (MQ=60)

               GTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTT                                                                              >  SRR4302540.4379807/1‑94 (MQ=60)

                 ATTGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCT                                                                            <  SRR4302540.4977880/94‑1 (MQ=60)

                 ATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGCCTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCT                                                                            >  SRR4302540.3603605/1‑94 (MQ=60)

                 ATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCT                                                                            >  SRR4302540.7465359/1‑94 (MQ=60)

                 ATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCT                                                                            >  SRR4302540.6146306/1‑94 (MQ=60)

                 ATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCT                                                                            <  SRR4302540.4977882/94‑1 (MQ=60)

                 ATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCT                                                                            >  SRR4302540.4019276/1‑94 (MQ=60)

                  TGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTT                                                                           >  SRR4302540.4310685/1‑94 (MQ=60)

                  TGGTGCGAGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCGGTCATGCATTCACCTTCTT                                                                           <  SRR4302540.3472372/94‑1 (MQ=60)

                   GGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCAACAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTC                                                                          >  SRR4302540.2624478/1‑94 (MQ=60)

                    GTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCT                                                                         <  SRR4302540.7555848/94‑1 (MQ=60)

                    GTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCT                                                                         >  SRR4302540.4884767/1‑94 (MQ=60)

                    GTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCT                                                                         >  SRR4302540.2102810/1‑94 (MQ=60)

                    GTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCT                                                                         >  SRR4302540.1361624/1‑94 (MQ=60)

                    GTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCT                                                                         <  SRR4302540.9414785/94‑1 (MQ=60)

                     TGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTC                                                                        <  SRR4302540.4830192/94‑1 (MQ=60)

                     TGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTC                                                                        <  SRR4302540.6637805/94‑1 (MQ=60)

                     TGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTC                                                                        <  SRR4302540.2363707/94‑1 (MQ=60)

                      GCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCG                                                                       <  SRR4302540.8940806/94‑1 (MQ=60)

                      GCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCC                                                                       >  SRR4302540.1069089/1‑94 (MQ=60)

                        TGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCC                                                                     <  SRR4302540.655829/94‑1 (MQ=60)

                        TGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCC                                                                     <  SRR4302540.5823888/94‑1 (MQ=60)

                          GCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGT                                                                   <  SRR4302540.2904635/94‑1 (MQ=60)

                          GCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGT                                                                   >  SRR4302540.276311/1‑94 (MQ=60)

                           CATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTT                                                                  >  SRR4302540.7968577/1‑94 (MQ=60)

                           CATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTT                                                                  >  SRR4302540.6610120/1‑94 (MQ=60)

                           CATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTT                                                                  >  SRR4302540.4793728/1‑94 (MQ=60)

                           CATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTC                                                                  >  SRR4302540.7685011/1‑94 (MQ=60)

                            ATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTC                                                                 >  SRR4302540.7747158/1‑94 (MQ=60)

                            ATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTC                                                                 >  SRR4302540.4800165/1‑94 (MQ=60)

                            ATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTC                                                                 >  SRR4302540.4953689/1‑94 (MQ=60)

                            ATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTC                                                                 >  SRR4302540.5341586/1‑94 (MQ=60)

                            ATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTAACCTTCTTCTAGCCGTTC                                                                 >  SRR4302540.9410172/1‑94 (MQ=60)

                             TTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCC                                                                >  SRR4302540.57652/1‑94 (MQ=60)

                             TTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCC                                                                <  SRR4302540.9825358/94‑1 (MQ=60)

                              TCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCT                                                               <  SRR4302540.3754698/94‑1 (MQ=60)

                              TCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCT                                                               >  SRR4302540.6928179/1‑94 (MQ=60)

                              TCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCT                                                               <  SRR4302540.5020538/94‑1 (MQ=60)

                              TCGCCTTTATTTCGAACTATTCCGGACTGGCATCAGCCCTGGCGCTGGCCCTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCT                                                               <  SRR4302540.5020535/94‑1 (MQ=60)

                               CGCCTTTATTTCGAACTATTCCGGACTGTCATCAAGACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTC                                                              >  SRR4302540.4837338/1‑94 (MQ=60)

                               CGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTC                                                              >  SRR4302540.8520109/1‑94 (MQ=60)

                               CGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTC                                                              <  SRR4302540.676982/94‑1 (MQ=60)

                                GCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCG                                                             <  SRR4302540.1448198/94‑1 (MQ=60)

                                GCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCG                                                             <  SRR4302540.5824232/94‑1 (MQ=60)

                                 CCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGG                                                            >  SRR4302540.7606020/1‑94 (MQ=60)

                                 CCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGG                                                            >  SRR4302540.491080/1‑94 (MQ=60)

                                 CCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGG                                                            >  SRR4302540.7083286/1‑94 (MQ=60)

                                  CTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGC                                                           >  SRR4302540.7168739/1‑94 (MQ=60)

                                  CTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGC                                                           >  SRR4302540.4369817/1‑94 (MQ=60)

                                  CTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGC                                                           >  SRR4302540.5760047/1‑94 (MQ=60)

                                   TTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCT                                                          <  SRR4302540.9506064/94‑1 (MQ=60)

                                   TTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCT                                                          >  SRR4302540.9572569/1‑94 (MQ=60)

                                   TTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCT                                                          >  SRR4302540.9238320/1‑94 (MQ=60)

                                    TTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTG                                                         <  SRR4302540.2327800/94‑1 (MQ=60)

                                    TTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTG                                                         >  SRR4302540.6318407/1‑94 (MQ=60)

                                    TTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTG                                                         <  SRR4302540.3419354/94‑1 (MQ=60)

                                     TATTTCGAACTATTCCGGACTGTCATCACCACTGGCGCTGGCACTCGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCTGCTGG                                                        >  SRR4302540.9641994/1‑94 (MQ=60)

                                     TATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGG                                                        <  SRR4302540.648760/94‑1 (MQ=60)

                                      ATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGC                                                       <  SRR4302540.1727738/94‑1 (MQ=60)

                                      ATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGC                                                       <  SRR4302540.9282686/94‑1 (MQ=60)

                                      ATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGC                                                       <  SRR4302540.1353903/94‑1 (MQ=60)

                                      ATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGC                                                       >  SRR4302540.9130302/1‑94 (MQ=60)

                                       TTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCT                                                      >  SRR4302540.4551325/1‑94 (MQ=60)

                                       TTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCT                                                      >  SRR4302540.9236406/1‑94 (MQ=60)

                                       TTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCT                                                      <  SRR4302540.3555360/94‑1 (MQ=60)

                                       TTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCT                                                      <  SRR4302540.3555361/94‑1 (MQ=60)

                                          CGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGG                                                   >  SRR4302540.9443765/1‑94 (MQ=60)

                                          CGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGCCTGGCTGGG                                                   >  SRR4302540.7853442/1‑94 (MQ=60)

                                           GAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCGCACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGG                                                  <  SRR4302540.7058761/94‑1 (MQ=60)

                                           GAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGG                                                  <  SRR4302540.6705396/94‑1 (MQ=60)

                                           GAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGATGGCTGGGG                                                  >  SRR4302540.10121546/1‑94 (MQ=60)

                                           GAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGAGCACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGG                                                  <  SRR4302540.7058760/94‑1 (MQ=60)

                                             ACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCGCCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGT                                                <  SRR4302540.8317267/94‑1 (MQ=60)

                                             ACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGT                                                <  SRR4302540.8376890/94‑1 (MQ=60)

                                              CTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTA                                               >  SRR4302540.3790197/1‑94 (MQ=60)

                                              CTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTA                                               >  SRR4302540.9599511/1‑94 (MQ=60)

                                               TATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTAT                                              >  SRR4302540.3749180/1‑94 (MQ=60)

                                               TATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTAT                                              >  SRR4302540.2417217/1‑94 (MQ=60)

                                               TATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTAT                                              >  SRR4302540.8494206/1‑94 (MQ=60)

                                                 TTCCGGACTGTCATCAACGCTGGCGCTGCCACTGGCGCACACCAGTTATGCATTCACCTTCTGCTCGCAGTTCCTCGGCTGGCTGGGGGTATTC                                            <  SRR4302540.1023399/94‑1 (MQ=60)

                                                 TTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTC                                            <  SRR4302540.1473008/94‑1 (MQ=60)

                                                  TCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCC                                           >  SRR4302540.6444754/1‑94 (MQ=60)

                                                  TCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCC                                           <  SRR4302540.3324151/94‑1 (MQ=60)

                                                   CCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCT                                          <  SRR4302540.1599565/94‑1 (MQ=60)

                                                   CCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCT                                          <  SRR4302540.9267219/94‑1 (MQ=60)

                                                   CCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCT                                          >  SRR4302540.8083392/1‑94 (MQ=60)

                                                    CGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTG                                         >  SRR4302540.4573846/1‑94 (MQ=60)

                                                    CGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTG                                         <  SRR4302540.3023631/94‑1 (MQ=60)

                                                     GGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCGGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGA                                        >  SRR4302540.5565752/1‑94 (MQ=60)

                                                     GGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGA                                        >  SRR4302540.6010724/1‑94 (MQ=60)

                                                      GACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGAC                                       >  SRR4302540.6431489/1‑94 (MQ=60)

                                                       GCTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACC                                      <  SRR4302540.6450556/94‑1 (MQ=60)

                                                       ACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACC                                      <  SRR4302540.4867081/94‑1 (MQ=60)

                                                       ACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACC                                      <  SRR4302540.2655349/94‑1 (MQ=60)

                                                       ACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACC                                      <  SRR4302540.708828/94‑1 (MQ=60)

                                                       ACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACC                                      >  SRR4302540.9459873/1‑94 (MQ=60)

                                                        CTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCG                                     >  SRR4302540.3032289/1‑94 (MQ=60)

                                                        CTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCG                                     >  SRR4302540.8761593/1‑94 (MQ=60)

                                                        CTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCG                                     >  SRR4302540.48997/1‑94 (MQ=60)

                                                        CTGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCG                                     >  SRR4302540.1302322/1‑94 (MQ=60)

                                                         TGTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGG                                    >  SRR4302540.6226510/1‑94 (MQ=60)

                                                          GTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGG                                   <  SRR4302540.8456340/94‑1 (MQ=60)

                                                          GTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGG                                   >  SRR4302540.5263934/1‑94 (MQ=60)

                                                          GTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTACCCGGG                                   >  SRR4302540.7879727/1‑94 (MQ=60)

                                                          GTCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATGCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGG                                   <  SRR4302540.8456341/94‑1 (MQ=60)

                                                           TCATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGC                                  >  SRR4302540.624417/1‑94 (MQ=60)

                                                            CATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTC                                 <  SRR4302540.3441844/94‑1 (MQ=60)

                                                            CATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTC                                 >  SRR4302540.4525789/1‑94 (MQ=60)

                                                             ATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCG                                >  SRR4302540.25275/1‑94 (MQ=60)

                                                             ATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCG                                <  SRR4302540.5470034/94‑1 (MQ=60)

                                                             ATCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCG                                >  SRR4302540.6303461/1‑94 (MQ=60)

                                                              TCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGG                               >  SRR4302540.195786/1‑94 (MQ=60)

                                                              TCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGGCGG                               >  SRR4302540.2771262/1‑94 (MQ=60)

                                                              TCAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCAGCTGGCTGGGGGTATTCCTGACCGGGTCGG                               >  SRR4302540.2831574/1‑94 (MQ=60)

                                                               CAACACTGGCGCTGGCACTGGCGCACACCGGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGATGGCTGGGGGTATTtcttaccggttctgg                              >  SRR4302540.9180797/1‑79 (MQ=60)

                                                               CAACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGA                              >  SRR4302540.6014200/1‑94 (MQ=60)

                                                                AACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGAT                             <  SRR4302540.8220978/94‑1 (MQ=60)

                                                                AACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGAT                             <  SRR4302540.7785479/94‑1 (MQ=60)

                                                                AACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGAT                             >  SRR4302540.620749/1‑94 (MQ=60)

                                                                 ACACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATA                            <  SRR4302540.3004912/94‑1 (MQ=60)

                                                                  CACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATAC                           <  SRR4302540.9575155/94‑1 (MQ=60)

                                                                   ACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGTGGGTATTCCTGACCGGGTCGGATACC                          >  SRR4302540.296453/1‑94 (MQ=60)

                                                                   ACTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACC                          >  SRR4302540.3822239/1‑94 (MQ=60)

                                                                    CTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCT                         >  SRR4302540.8899503/1‑94 (MQ=60)

                                                                    CTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCT                         >  SRR4302540.3995131/1‑94 (MQ=60)

                                                                    CTGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCT                         <  SRR4302540.6213098/94‑1 (MQ=60)

                                                                     TGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTC                        >  SRR4302540.4472720/1‑94 (MQ=60)

                                                                     TGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCCGATACCTC                        >  SRR4302540.4172435/1‑94 (MQ=60)

                                                                     TGGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGGCGGATAACTC                        >  SRR4302540.4472721/1‑94 (MQ=60)

                                                                      GGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCA                       <  SRR4302540.9801025/94‑1 (MQ=60)

                                                                      GGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCA                       <  SRR4302540.1965847/94‑1 (MQ=60)

                                                                      GGCGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTACTCGGCTGGCTGGGGGTATTCCTGACCGGGGCGGATACCTCA                       >  SRR4302540.8379222/1‑94 (MQ=60)

                                                                        GGCTGGCCCTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATTCCTCATC                     <  SRR4302540.8443047/94‑1 (MQ=60)

                                                                        CGCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATC                     <  SRR4302540.8443046/94‑1 (MQ=60)

                                                                         GCTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCT                    <  SRR4302540.9147803/94‑1 (MQ=60)

                                                                          CTGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTA                   <  SRR4302540.1555004/94‑1 (MQ=60)

                                                                           TGGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAA                  <  SRR4302540.8186563/94‑1 (MQ=60)

                                                                            GGCGCTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAAC                 <  SRR4302540.3173185/94‑1 (MQ=60)

                                                                            GGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAAC                 >  SRR4302540.7800215/1‑94 (MQ=60)

                                                                            GGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAAC                 <  SRR4302540.2258235/94‑1 (MQ=60)

                                                                            GGCACTGGCGCACACCAGTCATGCATTCACCTTCTTCGCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAAC                 <  SRR4302540.8077150/94‑1 (MQ=60)

                                                                              CACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGC               >  SRR4302540.5190395/1‑94 (MQ=60)

                                                                              CACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGC               >  SRR4302540.7056837/1‑94 (MQ=60)

                                                                               ACTGGCGCACACCAGTCATGCATTCCCCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCC              <  SRR4302540.2019183/94‑1 (MQ=60)

                                                                               ACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCC              <  SRR4302540.1949742/94‑1 (MQ=60)

                                                                               ACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCC              >  SRR4302540.6142748/1‑94 (MQ=60)

                                                                               ACTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCC              >  SRR4302540.7504721/1‑94 (MQ=60)

                                                                                CTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCC             <  SRR4302540.7643767/94‑1 (MQ=60)

                                                                                CTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCC             <  SRR4302540.10152383/94‑1 (MQ=60)

                                                                                CTGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCC             <  SRR4302540.9417962/94‑1 (MQ=60)

                                                                                 TGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCT            >  SRR4302540.2846468/1‑94 (MQ=60)

                                                                                 TGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCT            <  SRR4302540.9259261/94‑1 (MQ=60)

                                                                                 TGGCGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCT            <  SRR4302540.4763808/94‑1 (MQ=60)

                                                                                    CGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTT         >  SRR4302540.2611237/1‑94 (MQ=60)

                                                                                    CGCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTT         <  SRR4302540.6801889/94‑1 (MQ=60)

                                                                                     GCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTC        <  SRR4302540.4293178/94‑1 (MQ=60)

                                                                                     GCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTC        >  SRR4302540.10046859/1‑94 (MQ=60)

                                                                                     GCACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTC        >  SRR4302540.9253817/1‑94 (MQ=60)

                                                                                      CACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCG       >  SRR4302540.693926/1‑94 (MQ=60)

                                                                                      CACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCG       <  SRR4302540.8855433/94‑1 (MQ=60)

                                                                                       ACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGC      >  SRR4302540.5329561/1‑94 (MQ=60)

                                                                                       ACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGC      >  SRR4302540.1808538/1‑94 (MQ=60)

                                                                                       ACACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGC      >  SRR4302540.1808535/1‑94 (MQ=60)

                                                                                        CACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGCC     <  SRR4302540.1978174/94‑1 (MQ=60)

                                                                                        CACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGCC     <  SRR4302540.5155328/94‑1 (MQ=60)

                                                                                        CACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGCC     <  SRR4302540.9230006/94‑1 (MQ=60)

                                                                                        CACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGCC     >  SRR4302540.9097525/1‑94 (MQ=60)

                                                                                        CACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGCC     <  SRR4302540.1501438/94‑1 (MQ=60)

                                                                                         ACCAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCCGGTCGGATACCTCATCTAACGCCCTGTTCGCCG    >  SRR4302540.4790784/1‑94 (MQ=60)

                                                                                           CAGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGCCGCG  <  SRR4302540.454321/94‑1 (MQ=60)

CCATCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCGGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGCCGCG  >  NC_000913/3776248‑3776432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`