Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,804,224	A→G	T157T (ACT→ACC)	rfaG ←	glucosyltransferase I

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,804,224	0	A	G	99.8%	1705.1 / NA	530	T157T (ACT→ACC)	rfaG	glucosyltransferase I
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (328/200); total (329/201)
Fisher's exact test for biased strand distribution p-value = 3.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 605 total aligned reads displayed.

GCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTC  >  NC_000913/3804134‑3804313

gCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGt                                                                                         <  1:3118531/93‑1 (MQ=255)

   aTAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTg                                                                                      >  1:7107914/1‑93 (MQ=255)

   aTAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTg                                                                                      >  1:3243673/1‑93 (MQ=255)

      aaTTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATa                                                                                   >  2:9545631/1‑93 (MQ=255)

      aaTTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATa                                                                                   >  1:8693513/1‑93 (MQ=255)

      aaTTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATa                                                                                   >  1:91524/1‑93 (MQ=255)

       agttCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATaa                                                                                  <  2:6831595/91‑1 (MQ=255)

       aTTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTTATaa                                                                                  >  1:3966886/1‑93 (MQ=255)

       aTTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATaa                                                                                  >  1:7857635/1‑93 (MQ=255)

       aTTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATaa                                                                                  <  2:7985102/93‑1 (MQ=255)

        tttCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAAt                                                                                 >  1:8018585/1‑93 (MQ=255)

        tttCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAAt                                                                                 >  1:8289692/1‑93 (MQ=255)

        tttCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAAt                                                                                 <  2:1151591/93‑1 (MQ=255)

         ttCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATg                                                                                <  1:2703181/93‑1 (MQ=255)

           cACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCt                                                                              >  2:4604418/1‑93 (MQ=255)

            aCGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCtt                                                                             <  2:4860625/93‑1 (MQ=255)

              ggCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTTGGTTTGATAATGCTTCt                                                                           >  1:8989296/1‑93 (MQ=255)

              ggCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCt                                                                           <  2:9278461/93‑1 (MQ=255)

              ggCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCt                                                                           <  1:8379033/93‑1 (MQ=255)

               gCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGACTTTGAAAACGTTCAGGTTGGGTTTGATAAGGCTtgtg                                                                          >  1:3615770/1‑93 (MQ=255)

               gCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTg                                                                          >  2:2535279/1‑93 (MQ=255)

               gCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTg                                                                          >  1:4698513/1‑93 (MQ=255)

                   tttGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAACCGTTCAGGTTCGGTTTGATAATGCTTCTGGaaa                                                                      <  2:7142463/93‑1 (MQ=255)

                   tttGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGaaa                                                                      >  1:1549634/1‑93 (MQ=255)

                   tttGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGaaa                                                                      >  1:8161913/1‑93 (MQ=255)

                    ttGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAAt                                                                     <  1:9834379/93‑1 (MQ=255)

                     tGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATc                                                                    >  1:1156875/1‑93 (MQ=255)

                      gggATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCg                                                                   <  2:9037635/93‑1 (MQ=255)

                      gggATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCg                                                                   >  2:5721734/1‑93 (MQ=255)

                         aTTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCg                                                                >  2:6139449/1‑93 (MQ=255)

                           ttGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGAt                                                              <  1:4837257/93‑1 (MQ=255)

                            tGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGAtt                                                             <  1:5588985/93‑1 (MQ=255)

                            tGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGAtt                                                             >  2:3866519/1‑93 (MQ=255)

                             gCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGAttt                                                            >  2:6459450/1‑93 (MQ=255)

                              cTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTg                                                           >  1:9599981/1‑93 (MQ=255)

                               tCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGc                                                          >  1:4104992/1‑93 (MQ=255)

                               tCACTGTATTTTCTGCCCGGATAAATACCGGGAGGAAGAATTTAAAAACGTTCAGGTTTGGTTTGATAATGCTCTTGGAAATCGACGATTTGc                                                          >  2:768516/1‑93 (MQ=255)

                                cACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCt                                                         >  2:9903047/1‑93 (MQ=255)

                                 aCTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCtt                                                        <  1:2562329/93‑1 (MQ=255)

                                 aCTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCtt                                                        <  1:5145203/93‑1 (MQ=255)

                                  cTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTa                                                       >  2:8854964/1‑93 (MQ=255)

                                  cTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTa                                                       >  2:8233139/1‑93 (MQ=255)

                                   tGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATa                                                                                   <  2:2318541/64‑1 (MQ=255)

                                   tGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTAt                                                      <  1:5975908/93‑1 (MQ=255)

                                   tGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTAt                                                      >  2:2170289/1‑93 (MQ=255)

                                       ttttCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGt                                                  >  2:3440242/1‑93 (MQ=255)

                                       ttttCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGt                                                  >  1:2226595/1‑93 (MQ=255)

                                        tttCTGTCCGGATAAATACCGGAAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTc                                                 <  1:5765279/93‑1 (MQ=255)

                                          tCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAg                                               >  1:6666091/1‑93 (MQ=255)

                                          tCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAg                                               >  2:7014400/1‑93 (MQ=255)

                                            tGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGca                                             <  1:3789990/93‑1 (MQ=255)

                                               ccGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGcatca                                          >  1:2881489/1‑93 (MQ=255)

                                                cGGATAAATAACGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGcatcat                                         <  1:5526164/93‑1 (MQ=255)

                                                  gATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATaa                                       >  2:10028651/1‑93 (MQ=255)

                                                  gATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATaa                                       >  2:7400777/1‑93 (MQ=255)

                                                   aTAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAg                                      <  1:430779/93‑1 (MQ=255)

                                                   aTAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAg                                      >  2:7877234/1‑93 (MQ=255)

                                                   aTAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAg                                      <  1:7408324/93‑1 (MQ=255)

                                                     aaaTACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGtt                                    <  1:1773375/93‑1 (MQ=255)

                                                     aaaTACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGtt                                    >  2:3263596/1‑93 (MQ=255)

                                                        tACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtcg                                 >  2:1847953/1‑93 (MQ=255)

                                                        tACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtcg                                 >  2:4916606/1‑93 (MQ=255)

                                                         aCCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtcgt                                >  1:10027715/1‑93 (MQ=255)

                                                          cggtgaggaAGAATTTGAAAACGGTCAGGTTCGGTGTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtcgtc                               <  2:845209/89‑1 (MQ=255)

                                                          ccGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtcgtc                               <  1:4373169/93‑1 (MQ=255)

                                                          ccGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtcgtc                               <  2:9397975/93‑1 (MQ=255)

                                                           cGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtcgtcg                              >  2:286018/1‑93 (MQ=255)

                                                            gggAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGa                             >  1:5364607/1‑93 (MQ=255)

                                                             ggaggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGAt                            >  1:3340325/1‑93 (MQ=255)

                                                             ggaggaAGAATTTGAAAACGTTCAGGTTCGCTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGAt                            <  2:5164090/93‑1 (MQ=255)

                                                              gaggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGAtt                           <  1:6510951/93‑1 (MQ=255)

                                                              gaggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGAtt                           <  2:4090448/93‑1 (MQ=255)

                                                              gaggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGAtt                           >  2:1268882/1‑93 (MQ=255)

                                                               aggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGAttt                          >  2:9716017/1‑93 (MQ=255)

                                                               aggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGAttt                          >  2:8643672/1‑93 (MQ=255)

                                                               aggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGAGCAGCATCATAGGTTTAGTCTAttt                          >  1:3445495/1‑93 (MQ=255)

                                                                ggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTa                         <  2:7297393/93‑1 (MQ=255)

                                                                 gaagaaTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAc                        >  1:7749634/1‑93 (MQ=255)

                                                                   agaaTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAccc                      <  1:1372896/93‑1 (MQ=255)

                                                                   agaaTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAccc                      <  1:9376911/93‑1 (MQ=255)

                                                                     aaTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTg                    <  2:1661690/93‑1 (MQ=255)

                                                                      aTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGc                   >  2:4738525/1‑93 (MQ=255)

                                                                       tttGAAAACGTTCAGGTTCTGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCt                  >  2:5377435/1‑93 (MQ=255)

                                                                        ttGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTc                 >  2:7545226/1‑93 (MQ=255)

                                                                         tGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCg                >  1:7674161/1‑93 (MQ=255)

                                                                          gAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGa               >  2:4516769/1‑93 (MQ=255)

                                                                          gAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGa               <  2:3712473/93‑1 (MQ=255)

                                                                           aaaaCGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGaa              <  1:2015056/93‑1 (MQ=255)

                                                                           aaaaCGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGaa              <  1:1651083/93‑1 (MQ=255)

                                                                           aaaaCGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGaa              >  1:6416865/1‑93 (MQ=255)

                                                                             aaCGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAg            >  1:4545408/1‑93 (MQ=255)

                                                                                gttcaggttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGtcg         >  2:1481746/1‑93 (MQ=255)

                                                                                  tcaggttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGtcgct       <  2:6007609/93‑1 (MQ=255)

                                                                                  tcaggttcggTTGGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGtcgct       <  2:3098873/93‑1 (MQ=255)

                                                                                    aggttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGtcgctcg     >  2:5605871/1‑93 (MQ=255)

                                                                                     ggttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGtcgctcgc    >  1:2158011/1‑93 (MQ=255)

                                                                                     ggttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGtcgctcgc    >  1:8517864/1‑93 (MQ=255)

                                                                                      gttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTcgctcgct   >  1:4986906/1‑93 (MQ=255)

                                                                                      gttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTcgctcgct   >  1:8817062/1‑93 (MQ=255)

                                                                                       ttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCgctcgctc  >  2:1044315/1‑93 (MQ=255)

GCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTC  >  NC_000913/3804134‑3804313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 342 total aligned reads displayed.

CTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAAT  >  NC_000913/3804131‑3804317

CTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCG                                                                                               >  SRR4302540.2387268/1‑94 (MQ=60)

CTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCG                                                                                               <  SRR4302540.9610201/94‑1 (MQ=60)

 TGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGG                                                                                              >  SRR4302540.1800506/1‑94 (MQ=60)

 TGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGG                                                                                              >  SRR4302540.3526851/1‑94 (MQ=60)

 TGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGG                                                                                              >  SRR4302540.6652928/1‑94 (MQ=60)

  GGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGT                                                                                             >  SRR4302540.290544/1‑94 (MQ=60)

   GCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTT                                                                                            <  SRR4302540.3152621/94‑1 (MQ=60)

      ATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGA                                                                                         >  SRR4302540.4210449/1‑94 (MQ=60)

       TAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGAT                                                                                        >  SRR4302540.1283255/1‑94 (MQ=60)

        AAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATA                                                                                       >  SRR4302540.8794439/1‑94 (MQ=60)

        AAATGTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATA                                                                                       <  SRR4302540.1698822/94‑1 (MQ=60)

         AATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAA                                                                                      <  SRR4302540.4797151/94‑1 (MQ=60)

         AATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAA                                                                                      >  SRR4302540.4009378/1‑94 (MQ=60)

         AATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAA                                                                                      >  SRR4302540.7949449/1‑94 (MQ=60)

         AATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAA                                                                                      <  SRR4302540.1977325/94‑1 (MQ=60)

          ATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAAT                                                                                     <  SRR4302540.3936270/94‑1 (MQ=60)

          ATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAAT                                                                                     <  SRR4302540.7976680/94‑1 (MQ=60)

          ATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAAT                                                                                     <  SRR4302540.2127681/94‑1 (MQ=60)

          ATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAAT                                                                                     <  SRR4302540.5289689/94‑1 (MQ=60)

            TTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGC                                                                                   >  SRR4302540.7545477/1‑94 (MQ=60)

            TTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGC                                                                                   <  SRR4302540.2732345/94‑1 (MQ=60)

            TTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGC                                                                                   >  SRR4302540.7869737/1‑94 (MQ=60)

             TCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCT                                                                                  <  SRR4302540.109476/94‑1 (MQ=60)

              CACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTT                                                                                 >  SRR4302540.4286031/1‑94 (MQ=60)

              CACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTT                                                                                 >  SRR4302540.3714030/1‑94 (MQ=60)

                CGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGACAACGTTCAGGGTCGGCTTGATAATGCTTCT                                                                               >  SRR4302540.7909024/1‑94 (MQ=60)

                CGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTTGGTTTGATAATGCTTCT                                                                               >  SRR4302540.9096852/1‑94 (MQ=60)

                CGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCT                                                                               >  SRR4302540.8497233/1‑94 (MQ=60)

                 GGCTGTTTTGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAACAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTG                                                                              <  SRR4302540.8073671/94‑1 (MQ=60)

                 GGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTG                                                                              <  SRR4302540.8476262/94‑1 (MQ=60)

                 GGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTG                                                                              >  SRR4302540.3445514/1‑94 (MQ=60)

                 GGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTG                                                                              >  SRR4302540.3655315/1‑94 (MQ=60)

                 GGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTG                                                                              >  SRR4302540.7164973/1‑94 (MQ=60)

                 GGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTG                                                                              <  SRR4302540.8313105/94‑1 (MQ=60)

                 GGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTCCTG                                                                              >  SRR4302540.3655313/1‑94 (MQ=60)

                  GCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGG                                                                             <  SRR4302540.863905/94‑1 (MQ=60)

                   CTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGA                                                                            >  SRR4302540.2229655/1‑94 (MQ=60)

                   CTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGA                                                                            >  SRR4302540.3405951/1‑94 (MQ=60)

                   CTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGA                                                                            >  SRR4302540.1427752/1‑94 (MQ=60)

                   CTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGA                                                                            <  SRR4302540.9514205/94‑1 (MQ=60)

                   CTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGA                                                                            >  SRR4302540.1589845/1‑94 (MQ=60)

                    TGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAA                                                                           >  SRR4302540.4079647/1‑94 (MQ=60)

                    TGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAA                                                                           >  SRR4302540.4079644/1‑94 (MQ=60)

                    TGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAA                                                                           >  SRR4302540.6029527/1‑94 (MQ=60)

                     GTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAA                                                                          >  SRR4302540.8256688/1‑94 (MQ=60)

                     GTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAA                                                                          >  SRR4302540.1566718/1‑94 (MQ=60)

                      TTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAAT                                                                         >  SRR4302540.7827364/1‑94 (MQ=60)

                       TTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATC                                                                        >  SRR4302540.5778242/1‑94 (MQ=60)

                       TTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATC                                                                        >  SRR4302540.1168911/1‑94 (MQ=60)

                       TTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATC                                                                        <  SRR4302540.9949387/94‑1 (MQ=60)

                       TTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATC                                                                        <  SRR4302540.2705110/94‑1 (MQ=60)

                        TGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCG                                                                       >  SRR4302540.8244373/1‑94 (MQ=60)

                        TGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCG                                                                       <  SRR4302540.9208867/94‑1 (MQ=60)

                          GGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGC                                                                     <  SRR4302540.4251067/94‑1 (MQ=60)

                          GGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGC                                                                     >  SRR4302540.7513209/1‑94 (MQ=60)

                          GGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGC                                                                     <  SRR4302540.3763876/94‑1 (MQ=60)

                            GTTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGA                                                                   <  SRR4302540.3208582/94‑1 (MQ=60)

                            ATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGA                                                                   >  SRR4302540.8853263/1‑94 (MQ=60)

                            ATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGA                                                                   >  SRR4302540.1414905/1‑94 (MQ=60)

                             TTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGAT                                                                  >  SRR4302540.7181555/1‑94 (MQ=60)

                              TTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATT                                                                 <  SRR4302540.3327123/94‑1 (MQ=60)

                              TTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATT                                                                 >  SRR4302540.1507072/1‑94 (MQ=60)

                              TTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATT                                                                 <  SRR4302540.4889078/94‑1 (MQ=60)

                              TTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATT                                                                 >  SRR4302540.9724665/1‑94 (MQ=60)

                               TGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTT                                                                >  SRR4302540.7025274/1‑94 (MQ=60)

                               TGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTT                                                                <  SRR4302540.5650493/94‑1 (MQ=60)

                               TGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTT                                                                <  SRR4302540.31802/94‑1 (MQ=60)

                                GCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTG                                                               <  SRR4302540.1101746/94‑1 (MQ=60)

                                 CTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGT                                                              >  SRR4302540.8917775/1‑94 (MQ=60)

                                 CTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGC                                                              >  SRR4302540.4714334/1‑94 (MQ=60)

                                 CTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGC                                                              >  SRR4302540.9684678/1‑94 (MQ=60)

                                 CTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGC                                                              >  SRR4302540.519112/1‑94 (MQ=60)

                                  TCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCT                                                             >  SRR4302540.5428083/1‑94 (MQ=60)

                                  TCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCT                                                             <  SRR4302540.2214043/94‑1 (MQ=60)

                                   CACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTT                                                            >  SRR4302540.7799971/1‑94 (MQ=60)

                                    ACTGTATTTTCTGTCCGGATAAATACCGGGAGGGAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTA                                                           >  SRR4302540.4503485/1‑94 (MQ=60)

                                    ACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTA                                                           <  SRR4302540.2589951/94‑1 (MQ=60)

                                    ACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTA                                                           >  SRR4302540.9693072/1‑94 (MQ=60)

                                    ACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTA                                                           >  SRR4302540.7312897/1‑94 (MQ=60)

                                    ACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTA                                                           >  SRR4302540.301587/1‑94 (MQ=60)

                                    ACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCGTA                                                           >  SRR4302540.4371833/1‑94 (MQ=60)

                                    ACTGTATTGTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTA                                                           <  SRR4302540.9301618/94‑1 (MQ=60)

                                     CTGTATTTTCTGTCCGGATAAATCCCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTAT                                                          <  SRR4302540.7530368/94‑1 (MQ=60)

                                     CTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAAaagcgctagatcggaagagcggttcagc                                                          >  SRR4302540.2343501/1‑66 (MQ=60)

                                     CTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTAT                                                          >  SRR4302540.3361250/1‑94 (MQ=60)

                                      TGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATG                                                         >  SRR4302540.7212153/1‑94 (MQ=60)

                                      TGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATC                                                         >  SRR4302540.8764678/1‑94 (MQ=60)

                                      TGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATC                                                         >  SRR4302540.1261604/1‑94 (MQ=60)

                                       GTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCG                                                        <  SRR4302540.3018331/94‑1 (MQ=60)

                                       GGATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTATGATAATGCTTCTATAACACGGCGATTTGCTTATCG                                                        >  SRR4302540.3514684/1‑94 (MQ=60)

                                        TATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGG                                                       >  SRR4302540.9434533/1‑94 (MQ=60)

                                         ATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGT                                                      >  SRR4302540.7878915/1‑94 (MQ=60)

                                         ATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGT                                                      >  SRR4302540.2250585/1‑94 (MQ=60)

                                           TTTCTGTCCGGATAAATACCGGAAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCA                                                    <  SRR4302540.5828937/94‑1 (MQ=60)

                                            TTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAG                                                   <  SRR4302540.4669748/94‑1 (MQ=60)

                                            TTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAG                                                   >  SRR4302540.6739765/1‑94 (MQ=60)

                                            TTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAG                                                   >  SRR4302540.8086145/1‑94 (MQ=60)

                                            TTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAG                                                   >  SRR4302540.8973409/1‑94 (MQ=60)

                                             TCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGC                                                  >  SRR4302540.4754239/1‑94 (MQ=60)

                                              CTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCA                                                 >  SRR4302540.5728903/1‑94 (MQ=60)

                                               TGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCAT                                                <  SRR4302540.3831311/94‑1 (MQ=60)

                                               TGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCAT                                                >  SRR4302540.2619486/1‑94 (MQ=60)

                                               TGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCAT                                                <  SRR4302540.35762/94‑1 (MQ=60)

                                                GTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATC                                               >  SRR4302540.8749453/1‑94 (MQ=60)

                                                  CCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCAT                                             >  SRR4302540.6548754/1‑94 (MQ=60)

                                                  CCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCAT                                             >  SRR4302540.7804650/1‑94 (MQ=60)

                                                  CCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCAT                                             >  SRR4302540.2820638/1‑94 (MQ=60)

                                                  CCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCAT                                             <  SRR4302540.2157561/94‑1 (MQ=60)

                                                   TGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATA                                            >  SRR4302540.6707971/1‑94 (MQ=60)

                                                   CGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATA                                            <  SRR4302540.5587022/94‑1 (MQ=60)

                                                   CGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATA                                            >  SRR4302540.8313224/1‑94 (MQ=60)

                                                   CGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATA                                            <  SRR4302540.8931456/94‑1 (MQ=60)

                                                   CGGATAAATAACGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATA                                            <  SRR4302540.5587023/94‑1 (MQ=60)

                                                    GGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAA                                           >  SRR4302540.2621357/1‑94 (MQ=60)

                                                    GGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAA                                           >  SRR4302540.3468491/1‑94 (MQ=60)

                                                     GATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAG                                          <  SRR4302540.8434782/94‑1 (MQ=60)

                                                     GATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAG                                          >  SRR4302540.4401490/1‑94 (MQ=60)

                                                      ATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGT                                         <  SRR4302540.6635721/94‑1 (MQ=60)

                                                       TAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTT                                        >  SRR4302540.5296758/1‑94 (MQ=60)

                                                        AAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTT                                       <  SRR4302540.1792623/94‑1 (MQ=60)

                                                        AAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTT                                       <  SRR4302540.2074474/94‑1 (MQ=60)

                                                        AAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTT                                       >  SRR4302540.4949129/1‑94 (MQ=60)

                                                         AATGCAGGGAGGAAGAATTTGAAATCGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTC                                      <  SRR4302540.4046326/94‑1 (MQ=60)

                                                         AATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTC                                      <  SRR4302540.6531115/94‑1 (MQ=60)

                                                          ATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCG                                     >  SRR4302540.8406287/1‑94 (MQ=60)

                                                          ATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCG                                     <  SRR4302540.4062251/94‑1 (MQ=60)

                                                          ATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCG                                     >  SRR4302540.8612012/1‑94 (MQ=60)

                                                          ATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCG                                     <  SRR4302540.9831989/94‑1 (MQ=60)

                                                          ATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCG                                     >  SRR4302540.5113817/1‑94 (MQ=60)

                                                          ATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCG                                     >  SRR4302540.4348150/1‑94 (MQ=60)

                                                             CCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCG                                  <  SRR4302540.6086434/94‑1 (MQ=60)

                                                             CCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCG                                  <  SRR4302540.4420666/94‑1 (MQ=60)

                                                             CCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCG                                  <  SRR4302540.291892/94‑1 (MQ=60)

                                                             CCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCG                                  >  SRR4302540.6029393/1‑94 (MQ=60)

                                                             CCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCG                                  <  SRR4302540.1657354/94‑1 (MQ=60)

                                                             CCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCG                                  >  SRR4302540.5579827/1‑94 (MQ=60)

                                                              CGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATACGTTTCGTCGA                                 >  SRR4302540.9477495/1‑94 (MQ=60)

                                                              CGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGA                                 >  SRR4302540.5423537/1‑94 (MQ=60)

                                                               GGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGAT                                >  SRR4302540.3376987/1‑94 (MQ=60)

                                                               GGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGAT                                >  SRR4302540.1781205/1‑94 (MQ=60)

                                                                GGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATT                               >  SRR4302540.57963/1‑94 (MQ=60)

                                                                GGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATT                               <  SRR4302540.513863/94‑1 (MQ=60)

                                                                GGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATT                               >  SRR4302540.6425836/1‑94 (MQ=60)

                                                                GGAGGAAGAATTTGAAAACGTTCAGGGTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATT                               >  SRR4302540.9342886/1‑94 (MQ=60)

                                                                 GAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTT                              <  SRR4302540.6583291/94‑1 (MQ=60)

                                                                  AGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTA                             >  SRR4302540.8431550/1‑94 (MQ=60)

                                                                  AGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTA                             >  SRR4302540.5342546/1‑94 (MQ=60)

                                                                  AGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTA                             <  SRR4302540.4414917/94‑1 (MQ=60)

                                                                   GGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAC                            >  SRR4302540.7840129/1‑94 (MQ=60)

                                                                   GGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAC                            >  SRR4302540.8852764/1‑94 (MQ=60)

                                                                   GGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAC                            >  SRR4302540.7956890/1‑94 (MQ=60)

                                                                   GGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAC                            >  SRR4302540.3286655/1‑94 (MQ=60)

                                                                   GGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAC                            <  SRR4302540.8186627/94‑1 (MQ=60)

                                                                   GGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAC                            >  SRR4302540.185548/1‑94 (MQ=60)

                                                                   GGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAC                            >  SRR4302540.2889228/1‑94 (MQ=60)

                                                                     AAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCC                          >  SRR4302540.9249795/1‑94 (MQ=60)

                                                                     AAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCC                          <  SRR4302540.47445/94‑1 (MQ=60)

                                                                      AGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCTATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCT                         <  SRR4302540.7342388/94‑1 (MQ=60)

                                                                      AGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCT                         <  SRR4302540.9488535/94‑1 (MQ=60)

                                                                      AGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCT                         <  SRR4302540.1061151/94‑1 (MQ=60)

                                                                      AGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCT                         <  SRR4302540.1387453/94‑1 (MQ=60)

                                                                      AGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCT                         >  SRR4302540.3268912/1‑94 (MQ=60)

                                                                       GAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTG                        >  SRR4302540.10094997/1‑94 (MQ=60)

                                                                         ATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCT                      <  SRR4302540.6313576/94‑1 (MQ=60)

                                                                         ATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCT                      >  SRR4302540.6482040/1‑94 (MQ=60)

                                                                           TTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTttcggccgggaccataggtttggtcgattaacctgcttca                    >  SRR4302540.9968460/1‑54 (MQ=60)

                                                                           TTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCG                    >  SRR4302540.7760826/1‑94 (MQ=60)

                                                                           TTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCG                    >  SRR4302540.3497162/1‑94 (MQ=60)

                                                                             GAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAA                  >  SRR4302540.817/1‑94 (MQ=60)

                                                                              AAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAA                 <  SRR4302540.1669083/94‑1 (MQ=60)

                                                                              AAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAA                 <  SRR4302540.2036839/94‑1 (MQ=60)

                                                                               AAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAG                >  SRR4302540.4594593/1‑94 (MQ=60)

                                                                                AACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGT               >  SRR4302540.10096449/1‑94 (MQ=60)

                                                                                AACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGT               <  SRR4302540.6779728/94‑1 (MQ=60)

                                                                                  CGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCG             <  SRR4302540.675933/94‑1 (MQ=60)

                                                                                   GTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGC            >  SRR4302540.2542336/1‑94 (MQ=60)

                                                                                   GTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGC            >  SRR4302540.7490060/1‑94 (MQ=60)

                                                                                   GTTCAAGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGC            >  SRR4302540.8301300/1‑94 (MQ=60)

                                                                                    TTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCT           >  SRR4302540.9848126/1‑94 (MQ=60)

                                                                                    TTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCT           >  SRR4302540.172274/1‑94 (MQ=60)

                                                                                    TTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGACAGCATCATAAGTTTCGTCGATTTACCCTGCTCGACAATCGCT           >  SRR4302540.8521178/1‑94 (MQ=60)

                                                                                     TCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTC          <  SRR4302540.9040612/94‑1 (MQ=60)

                                                                                     TCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTC          <  SRR4302540.4926332/94‑1 (MQ=60)

                                                                                      CAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCG         <  SRR4302540.4972989/94‑1 (MQ=60)

                                                                                       AGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGC        >  SRR4302540.5607946/1‑94 (MQ=60)

                                                                                       AGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGC        >  SRR4302540.2181248/1‑94 (MQ=60)

                                                                                       AGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGC        >  SRR4302540.563963/1‑94 (MQ=60)

                                                                                       AGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGC        >  SRR4302540.390847/1‑94 (MQ=60)

                                                                                        GGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCT       >  SRR4302540.6502932/1‑94 (MQ=60)

                                                                                        GGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCT       >  SRR4302540.5994168/1‑94 (MQ=60)

                                                                                        GGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCT       >  SRR4302540.3616756/1‑94 (MQ=60)

                                                                                        GGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCT       >  SRR4302540.4837140/1‑94 (MQ=60)

                                                                                        GGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCT       >  SRR4302540.5040904/1‑94 (MQ=60)

                                                                                         GTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTC      >  SRR4302540.4574705/1‑94 (MQ=60)

                                                                                         GTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTC      >  SRR4302540.917298/1‑94 (MQ=60)

                                                                                          TTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCA     <  SRR4302540.5622369/94‑1 (MQ=60)

                                                                                             GGTTTGCTAATGGTTCTGGAAATCGGCGATTTGCTTAGTGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAAT  <  SRR4302540.1209718/94‑1 (MQ=60)

                                                                                             GGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAAT  <  SRR4302540.4517678/94‑1 (MQ=60)

                                                                                             GGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAAT  >  SRR4302540.8006849/1‑94 (MQ=60)

                                                                                             GGTTTGATAATGCTTCTGGAAATCGGCGATTTGCGTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCGCAAAG  >  SRR4302540.8933552/1‑94 (MQ=60)

CTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTCAAAT  >  NC_000913/3804131‑3804317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`