Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,806,223 A→G I19M (ATA→ATG)  kdtA → 3‑deoxy‑D‑manno‑octulosonic‑acid transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,806,2230AG98.7% 1703.5 / 3.3 536I19M (ATA→ATG) kdtA3‑deoxy‑D‑manno‑octulosonic‑acid transferase
Reads supporting (aligned to +/- strand):  ref base A (6/1);  new base G (266/263);  total (272/264)
Fisher's exact test for biased strand distribution p-value = 1.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01

Only 100 of 549 total aligned reads displayed.

AATCCCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATACGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGG  >  NC_000913/3806133‑3806312
                                                                                          |                                                                                         
aaTCCCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATTCg                                                                                         >  1:6243029/1‑93 (MQ=255)
aaTCCCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCg                                                                                         <  2:6604149/93‑1 (MQ=255)
    cccAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGctc                                                                                     <  1:487891/93‑1 (MQ=255)
    cccAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGctc                                                                                     <  1:1867188/93‑1 (MQ=255)
     ccAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGctct                                                                                    >  2:5399000/1‑93 (MQ=255)
     ccAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGctct                                                                                    >  1:7814396/1‑93 (MQ=255)
     ccAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGctct                                                                                    >  1:2969115/1‑93 (MQ=255)
       aGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTgg                                                                                  >  2:80300/1‑93 (MQ=255)
        gCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTggg                                                                                 >  2:2631071/1‑93 (MQ=255)
        gCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTggg                                                                                 >  1:5966077/1‑93 (MQ=255)
        gCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTggg                                                                                 >  1:8030638/1‑93 (MQ=255)
        gCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTggg                                                                                 >  2:3166554/1‑93 (MQ=255)
         cacaTCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGt                                                                                <  1:3827911/93‑1 (MQ=255)
           caTCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTgc                                                                              <  1:9258985/93‑1 (MQ=255)
             tCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTTGGTgcgc                                                                            >  1:3096402/1‑93 (MQ=255)
             tCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTgcgt                                                                            >  2:8196949/1‑92 (MQ=255)
             tCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTgcgc                                                                            <  2:3291566/93‑1 (MQ=255)
             tCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTgcgc                                                                            >  1:5425351/1‑93 (MQ=255)
               cATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCgg                                                                          <  1:6146596/93‑1 (MQ=255)
                 tAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGAc                                                                        >  1:7563554/1‑93 (MQ=255)
                 tAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCCCGCAc                                                                        >  1:6350726/1‑93 (MQ=255)
                   aGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGt                                                                      >  1:2677350/1‑93 (MQ=255)
                    gTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTa                                                                     <  2:4866928/93‑1 (MQ=255)
                     tCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTaa                                                                    <  1:1674605/93‑1 (MQ=255)
                     tCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTaa                                                                    <  2:8674132/93‑1 (MQ=255)
                     tCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTaa                                                                    <  1:1443192/93‑1 (MQ=255)
                     tCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTaa                                                                    >  1:8876184/1‑93 (MQ=255)
                     gcAGCTATTTACTAGCCTCGACTTGTTTTACCCCGCTCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTaa                                                                    <  2:3895094/92‑1 (MQ=255)
                       aGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAgg                                                                  >  2:6069152/1‑93 (MQ=255)
                       aGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAgg                                                                  >  1:9362647/1‑93 (MQ=255)
                       aGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATACGGCTCTGGGTGCGCGGACGTAAgg                                                                  >  1:9861944/1‑93 (MQ=255)
                        gCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGc                                                                 <  1:8083817/93‑1 (MQ=255)
                        gCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGc                                                                 <  1:6537427/93‑1 (MQ=255)
                         cTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCt                                                                >  2:2417356/1‑93 (MQ=255)
                          tATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTc                                                               >  2:8461671/1‑93 (MQ=255)
                          tATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTc                                                               >  1:2404527/1‑93 (MQ=255)
                           aTTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTcc                                                              >  1:6656141/1‑93 (MQ=255)
                           aTTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTcc                                                              <  2:3429973/93‑1 (MQ=255)
                           aTTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTcc                                                              <  2:703292/93‑1 (MQ=255)
                           aTTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATACGGCTCTGGGTGCGCGGACGTAAGGCTcc                                                              >  2:6999484/1‑93 (MQ=255)
                            tttACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCg                                                             >  1:1203503/1‑93 (MQ=255)
                              tACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGc                                                           >  2:1162106/1‑93 (MQ=255)
                               aCTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGcc                                                          >  1:4754969/1‑93 (MQ=255)
                               aCTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGcc                                                          <  1:7031375/93‑1 (MQ=255)
                                cTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCt                                                         <  1:2063124/93‑1 (MQ=255)
                                  aTGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTAt                                                       >  2:5697242/1‑93 (MQ=255)
                                  aTGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATACGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTAt                                                       >  1:9059886/1‑93 (MQ=255)
                                   tGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATc                                                      >  2:4253965/1‑93 (MQ=255)
                                   tGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATc                                                      >  1:9622719/1‑93 (MQ=255)
                                     cTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATACGGCTCTGGGTGCGCGGACGTACGGCTCCGGCCTATCGa                                                    >  2:6424000/1‑93 (MQ=255)
                                      tCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGaa                                                   >  2:7162698/1‑93 (MQ=255)
                                        gAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGaaaa                                                 <  2:492339/93‑1 (MQ=255)
                                        gAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGaaaa                                                 <  1:2550127/93‑1 (MQ=255)
                                        gAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGaaaa                                                 <  1:1024737/93‑1 (MQ=255)
                                         aaTTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAAc                                                <  1:6889586/93‑1 (MQ=255)
                                          aTTGCTTTACACCACCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACg                                               >  2:6863013/1‑93 (MQ=255)
                                           ttGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGc                                              <  2:9509569/93‑1 (MQ=255)
                                              cTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTgg                                           <  2:1048935/93‑1 (MQ=255)
                                                ttACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTgggg                                         <  2:305370/93‑1 (MQ=255)
                                                  acacCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTg                                       >  1:3986735/1‑93 (MQ=255)
                                                   cacCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGa                                      >  2:6818967/1‑93 (MQ=255)
                                                   cacCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGa                                      <  2:7398026/93‑1 (MQ=255)
                                                      cGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACg                                   <  2:3831709/93‑1 (MQ=255)
                                                       gCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGt                                  >  2:775363/1‑93 (MQ=255)
                                                        cccTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGtt                                 <  2:4719639/93‑1 (MQ=255)
                                                         ccTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTa                                <  1:5056416/93‑1 (MQ=255)
                                                           ttCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACg                              >  1:5251718/1‑93 (MQ=255)
                                                           ttCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACg                              >  1:1942889/1‑93 (MQ=255)
                                                             ctctACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGt                            <  1:7462949/93‑1 (MQ=255)
                                                                tACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGtttt                         >  2:5321040/1‑93 (MQ=255)
                                                                 aCCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGttttt                        >  2:142342/1‑93 (MQ=255)
                                                                   cTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTAc                      <  1:1128228/93‑1 (MQ=255)
                                                                   cTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTAc                      <  1:1308965/93‑1 (MQ=255)
                                                                    ttATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTAcc                     <  1:3341685/93‑1 (MQ=255)
                                                                      aTTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGc                   >  1:838893/1‑93 (MQ=255)
                                                                        tCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACTCTGGGGTGAAAGTTACGGTTTTTACCGCCa                 >  1:2227894/1‑93 (MQ=255)
                                                                        tCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCa                 <  1:3452745/93‑1 (MQ=255)
                                                                        tCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCa                 >  1:8561806/1‑93 (MQ=255)
                                                                        tCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCa                 <  2:1584491/93‑1 (MQ=255)
                                                                          aGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATc               <  1:8675206/93‑1 (MQ=255)
                                                                          aGCCGCTGATCTGGATGCGGCTCTGGGTGCGAGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATc               <  1:56009/93‑1 (MQ=255)
                                                                           gCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAACCGCTGGGGGGAACGTTACGGTTTTTACCGCCATcc              >  1:8254096/1‑93 (MQ=255)
                                                                           gCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATcc              >  2:586697/1‑93 (MQ=255)
                                                                           gCCGCGGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATcc              <  2:2171623/93‑1 (MQ=255)
                                                                             cGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGc            >  1:5710623/1‑93 (MQ=255)
                                                                              gCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCt           >  2:5105590/1‑93 (MQ=255)
                                                                              gCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCt           <  2:4047692/93‑1 (MQ=255)
                                                                              gCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCt           <  2:3548550/93‑1 (MQ=255)
                                                                               cTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTa          >  2:1766963/1‑93 (MQ=255)
                                                                               cTGATCTGGATGCGGCTCTGAGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTa          >  1:4595084/1‑93 (MQ=255)
                                                                                tGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTaa         <  1:447051/93‑1 (MQ=255)
                                                                                tGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTaa         <  2:9213774/93‑1 (MQ=255)
                                                                                 gATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTaaa        <  1:4274419/93‑1 (MQ=255)
                                                                                  aTCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTaaaa       <  1:7135983/93‑1 (MQ=255)
                                                                                   tCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAAc      >  1:8820755/1‑93 (MQ=255)
                                                                                    cTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAAcc     <  2:4484172/93‑1 (MQ=255)
                                                                                    cTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAAcc     <  2:228035/93‑1 (MQ=255)
                                                                                     tGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCa    <  2:2966245/93‑1 (MQ=255)
                                                                                       gATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAgg  <  2:7244169/93‑1 (MQ=255)
                                                                                       gATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAgg  <  2:2741078/93‑1 (MQ=255)
                                                                                          |                                                                                         
AATCCCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATACGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGG  >  NC_000913/3806133‑3806312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 314 total aligned reads displayed.
AGAATCCCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATACGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGGCGGC  >  NC_000913/3806131‑3806316
                                                                                            |                                                                                             
AGAATCCCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGC                                                                                              <  SRR4302540.5942537/94‑1 (MQ=60)
AGAATCCCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGC                                                                                              <  SRR4302540.8337682/94‑1 (MQ=60)
 GAATCCCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATTCG                                                                                             >  SRR4302540.6312507/1‑94 (MQ=60)
 GAATCCCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCG                                                                                             >  SRR4302540.1065700/1‑94 (MQ=60)
  AATCCCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGG                                                                                            >  SRR4302540.2641423/1‑94 (MQ=60)
  AATCCCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGG                                                                                            >  SRR4302540.1367405/1‑94 (MQ=60)
    TCCCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCT                                                                                          <  SRR4302540.10016722/94‑1 (MQ=60)
      CCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCT                                                                                        <  SRR4302540.1887647/94‑1 (MQ=60)
      CCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCT                                                                                        <  SRR4302540.493114/94‑1 (MQ=60)
      CCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCT                                                                                        <  SRR4302540.246623/94‑1 (MQ=60)
      CCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCT                                                                                        >  SRR4302540.3001908/1‑94 (MQ=60)
      CCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCT                                                                                        >  SRR4302540.7905718/1‑94 (MQ=60)
      CCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCT                                                                                        <  SRR4302540.2127186/94‑1 (MQ=60)
       CCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTG                                                                                       >  SRR4302540.4602731/1‑94 (MQ=60)
       CCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTG                                                                                       <  SRR4302540.9178479/94‑1 (MQ=60)
       CCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTG                                                                                       >  SRR4302540.2192799/1‑94 (MQ=60)
       CCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTG                                                                                       >  SRR4302540.4602730/1‑94 (MQ=60)
        CAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGG                                                                                      >  SRR4302540.1225783/1‑94 (MQ=60)
         AGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGG                                                                                     >  SRR4302540.8124007/1‑94 (MQ=60)
         AGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGG                                                                                     >  SRR4302540.6032091/1‑94 (MQ=60)
          GCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGT                                                                                    <  SRR4302540.7147024/94‑1 (MQ=60)
          GCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGT                                                                                    <  SRR4302540.3797180/94‑1 (MQ=60)
          GCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGT                                                                                    <  SRR4302540.2691871/94‑1 (MQ=60)
          GCACATCCATAAGTCAGCTATTTACTATGCTCGAATAGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGT                                                                                    >  SRR4302540.8552060/1‑94 (MQ=60)
           CACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTG                                                                                   <  SRR4302540.8402300/94‑1 (MQ=60)
           CACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATACGGCTCTGGGTG                                                                                   >  SRR4302540.8629187/1‑94 (MQ=60)
            ctATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTTCCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGC                                                                                  <  SRR4302540.9145536/92‑1 (MQ=60)
            ACATCCATAAGTCAGCTATTTACTATGCTCTAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGC                                                                                  <  SRR4302540.179383/94‑1 (MQ=60)
            ACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGC                                                                                  >  SRR4302540.1961122/1‑94 (MQ=60)
             CATCCATAAGTCAGCTTTTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCG                                                                                 <  SRR4302540.9093365/94‑1 (MQ=60)
             CATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCG                                                                                 >  SRR4302540.667497/1‑94 (MQ=60)
              ATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTTGGTGCGC                                                                                >  SRR4302540.3130339/1‑94 (MQ=60)
              ATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGC                                                                                >  SRR4302540.5485016/1‑94 (MQ=60)
              ATCCATAAGTCAGCTATTTACTATGCTCGAATCGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGC                                                                                >  SRR4302540.5485017/1‑94 (MQ=60)
               TCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCG                                                                               <  SRR4302540.2378092/94‑1 (MQ=60)
                CCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGG                                                                              >  SRR4302540.6049364/1‑94 (MQ=60)
                CCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGG                                                                              >  SRR4302540.3067303/1‑94 (MQ=60)
                 CATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGA                                                                             <  SRR4302540.6215055/94‑1 (MQ=60)
                 CATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGA                                                                             >  SRR4302540.4701558/1‑94 (MQ=60)
                  ATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGAC                                                                            >  SRR4302540.9438074/1‑94 (MQ=60)
                  ATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGAC                                                                            <  SRR4302540.5967060/94‑1 (MQ=60)
                  ATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGAC                                                                            >  SRR4302540.9371125/1‑94 (MQ=60)
                  ATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGAC                                                                            >  SRR4302540.7648386/1‑94 (MQ=60)
                  ATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGAC                                                                            >  SRR4302540.8774931/1‑94 (MQ=60)
                   TAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACG                                                                           >  SRR4302540.9723465/1‑94 (MQ=60)
                   TAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACG                                                                           <  SRR4302540.8778343/94‑1 (MQ=60)
                    AAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGT                                                                          >  SRR4302540.2706324/1‑94 (MQ=60)
                    AAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGT                                                                          <  SRR4302540.8996360/94‑1 (MQ=60)
                    AAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGT                                                                          <  SRR4302540.6394067/94‑1 (MQ=60)
                    AAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGT                                                                          >  SRR4302540.6627593/1‑94 (MQ=60)
                     AGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTA                                                                         >  SRR4302540.8012249/1‑94 (MQ=60)
                     AGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTA                                                                         >  SRR4302540.1142737/1‑94 (MQ=60)
                      GTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAA                                                                        >  SRR4302540.5903507/1‑94 (MQ=60)
                      GTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAA                                                                        >  SRR4302540.9569123/1‑94 (MQ=60)
                      GTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAA                                                                        >  SRR4302540.8978906/1‑94 (MQ=60)
                       TCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAG                                                                       <  SRR4302540.1108074/94‑1 (MQ=60)
                       TCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAG                                                                       <  SRR4302540.1692800/94‑1 (MQ=60)
                       TCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAG                                                                       <  SRR4302540.8634268/94‑1 (MQ=60)
                       TCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAG                                                                       <  SRR4302540.6255027/94‑1 (MQ=60)
                       TCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAG                                                                       <  SRR4302540.7619738/94‑1 (MQ=60)
                        CAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATCCGGCTCTGGGTGCGCGGACGTAAGC                                                                      >  SRR4302540.3374825/1‑94 (MQ=60)
                          GCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCT                                                                    <  SRR4302540.6609980/94‑1 (MQ=60)
                          GCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCT                                                                    <  SRR4302540.8177637/94‑1 (MQ=60)
                           CTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTACGGCTC                                                                   >  SRR4302540.2828610/1‑94 (MQ=60)
                           CTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTC                                                                   >  SRR4302540.2430459/1‑94 (MQ=60)
                           CTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTC                                                                   >  SRR4302540.1477830/1‑94 (MQ=60)
                            TATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCC                                                                  <  SRR4302540.1488073/94‑1 (MQ=60)
                            TATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCC                                                                  >  SRR4302540.6729749/1‑94 (MQ=60)
                            TATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCC                                                                  <  SRR4302540.1710007/94‑1 (MQ=60)
                            TATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCC                                                                  >  SRR4302540.647108/1‑94 (MQ=60)
                            TATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCC                                                                  <  SRR4302540.713396/94‑1 (MQ=60)
                             ATTTACTATGCTCGAATTGCTTTACGCCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCG                                                                 <  SRR4302540.6518089/94‑1 (MQ=60)
                             ATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCG                                                                 >  SRR4302540.1293369/1‑94 (MQ=60)
                             ATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCG                                                                 >  SRR4302540.7916914/1‑94 (MQ=60)
                             ATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCG                                                                 >  SRR4302540.10109874/1‑94 (MQ=60)
                              TTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGG                                                                <  SRR4302540.6222452/94‑1 (MQ=60)
                              TTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGG                                                                <  SRR4302540.8165370/94‑1 (MQ=60)
                              TTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGG                                                                <  SRR4302540.9630757/94‑1 (MQ=60)
                              TTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGG                                                                >  SRR4302540.5597128/1‑94 (MQ=60)
                                TACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCC                                                              >  SRR4302540.4805704/1‑94 (MQ=60)
                                TACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCC                                                              <  SRR4302540.1964264/94‑1 (MQ=60)
                                 ACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCT                                                             >  SRR4302540.1072584/1‑94 (MQ=60)
                                 ACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCT                                                             <  SRR4302540.5036136/94‑1 (MQ=60)
                                  CTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTA                                                            <  SRR4302540.2085323/94‑1 (MQ=60)
                                   TATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTAT                                                           <  SRR4302540.248290/94‑1 (MQ=60)
                                   TATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTAT                                                           >  SRR4302540.3100047/1‑94 (MQ=60)
                                   TATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTAT                                                           >  SRR4302540.5116743/1‑94 (MQ=60)
                                    ATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATC                                                          <  SRR4302540.5525014/94‑1 (MQ=60)
                                    ATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATC                                                          <  SRR4302540.1229071/94‑1 (MQ=60)
                                     TGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCG                                                         >  SRR4302540.5357038/1‑94 (MQ=60)
                                       CTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAA                                                       <  SRR4302540.6872879/94‑1 (MQ=60)
                                         CGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAA                                                     >  SRR4302540.921211/1‑94 (MQ=60)
                                         CGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAA                                                     >  SRR4302540.4669953/1‑94 (MQ=60)
                                          GAATTTCTTTACGCCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAAC                                                    <  SRR4302540.3480177/94‑1 (MQ=60)
                                          GAATTGCTTTACGCCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAAC                                                    <  SRR4302540.4635204/94‑1 (MQ=60)
                                          GAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAAC                                                    <  SRR4302540.3480178/94‑1 (MQ=60)
                                          GAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAAC                                                    <  SRR4302540.7358503/94‑1 (MQ=60)
                                          GAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAAC                                                    <  SRR4302540.2577607/94‑1 (MQ=60)
                                          GAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAAC                                                    <  SRR4302540.8773941/94‑1 (MQ=60)
                                          GAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAAC                                                    <  SRR4302540.2760988/94‑1 (MQ=60)
                                          GAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAAC                                                    >  SRR4302540.1587795/1‑94 (MQ=60)
                                          GAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAAC                                                    <  SRR4302540.1035131/94‑1 (MQ=60)
                                          GAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAAC                                                    <  SRR4302540.4761291/94‑1 (MQ=60)
                                          GAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTACGGCCTATCGAAAAC                                                    >  SRR4302540.9158178/1‑94 (MQ=60)
                                           AATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATacgcgcgg                                                   <  SRR4302540.6124041/94‑9 (MQ=60)
                                           AATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACG                                                   >  SRR4302540.3923469/1‑94 (MQ=60)
                                           AATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACG                                                   >  SRR4302540.7594524/1‑94 (MQ=60)
                                            ATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGC                                                  >  SRR4302540.5014189/1‑94 (MQ=60)
                                             TTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCT                                                 >  SRR4302540.7259520/1‑94 (MQ=60)
                                              TGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTG                                                >  SRR4302540.488762/1‑94 (MQ=60)
                                              TGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTG                                                >  SRR4302540.6058601/1‑94 (MQ=60)
                                               GCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGG                                               <  SRR4302540.9595805/94‑1 (MQ=60)
                                               GCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGAAGCGGCTCTGTGTGCGCGGACGTGAGGCTCCGGCCTATCGAAAAGGCTGG                                               >  SRR4302540.8924624/1‑94 (MQ=60)
                                                CTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGG                                              >  SRR4302540.1926522/1‑94 (MQ=60)
                                                CTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGG                                              >  SRR4302540.7069424/1‑94 (MQ=60)
                                                  TTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGT                                            <  SRR4302540.8216969/94‑1 (MQ=60)
                                                  TTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGT                                            <  SRR4302540.7200912/94‑1 (MQ=60)
                                                  TTACACCGCCCTCCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGT                                            <  SRR4302540.6312535/94‑1 (MQ=60)
                                                   TACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTG                                           >  SRR4302540.4029661/1‑94 (MQ=60)
                                                    ACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGGGA                                          >  SRR4302540.8219052/1‑94 (MQ=60)
                                                     CACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAA                                         >  SRR4302540.1600012/1‑94 (MQ=60)
                                                      CCCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAAC                                        <  SRR4302540.6831575/94‑1 (MQ=60)
                                                      ACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAAC                                        >  SRR4302540.5878075/1‑94 (MQ=60)
                                                      ACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATACGGCTCCGGGTGCGCGGACGTAAGGCTCCGGCCTATCGACAACGCTGGcgggagg                                        >  SRR4302540.9317071/1‑87 (MQ=60)
                                                       CCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACG                                       <  SRR4302540.1297337/94‑1 (MQ=60)
                                                         GCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAACACGCTGGGGTGAACGTT                                     >  SRR4302540.8849651/1‑94 (MQ=60)
                                                         GCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTT                                     >  SRR4302540.3288173/1‑94 (MQ=60)
                                                          CCCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTA                                    >  SRR4302540.8452710/1‑94 (MQ=60)
                                                           CCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTAC                                   <  SRR4302540.5111083/94‑1 (MQ=60)
                                                           CCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTAC                                   >  SRR4302540.6906314/1‑94 (MQ=60)
                                                           CCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTAC                                   >  SRR4302540.803264/1‑94 (MQ=60)
                                                           CCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTAC                                   >  SRR4302540.8547583/1‑94 (MQ=60)
                                                           CCTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTAC                                   <  SRR4302540.4221216/94‑1 (MQ=60)
                                                           CCCTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTAC                                   <  SRR4302540.6216246/94‑1 (MQ=60)
                                                            CTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACG                                  >  SRR4302540.5309003/1‑94 (MQ=60)
                                                            CTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACG                                  >  SRR4302540.5429610/1‑94 (MQ=60)
                                                            CTTCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACG                                  >  SRR4302540.1964042/1‑94 (MQ=60)
                                                              TCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGT                                >  SRR4302540.1911626/1‑94 (MQ=60)
                                                              TCTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGT                                >  SRR4302540.4035635/1‑94 (MQ=60)
                                                               CTCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTT                               <  SRR4302540.7546174/94‑1 (MQ=60)
                                                                TCTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTT                              >  SRR4302540.4194634/1‑94 (MQ=60)
                                                                 CTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTT                             >  SRR4302540.1386089/1‑94 (MQ=60)
                                                                 CTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTT                             <  SRR4302540.9760984/94‑1 (MQ=60)
                                                                 CTACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTT                             <  SRR4302540.1989576/94‑1 (MQ=60)
                                                                  TACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCTGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTT                            >  SRR4302540.6710158/1‑94 (MQ=60)
                                                                  TACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTT                            <  SRR4302540.3369203/94‑1 (MQ=60)
                                                                  TACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTT                            <  SRR4302540.2998350/94‑1 (MQ=60)
                                                                  TACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTT                            >  SRR4302540.8167948/1‑94 (MQ=60)
                                                                  TACCTTATCCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTT                            <  SRR4302540.819358/94‑1 (MQ=60)
                                                                   ACCTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTA                           >  SRR4302540.7604382/1‑94 (MQ=60)
                                                                     CTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACC                         <  SRR4302540.7172635/94‑1 (MQ=60)
                                                                     CTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACC                         <  SRR4302540.4861672/94‑1 (MQ=60)
                                                                     CTTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACC                         >  SRR4302540.386949/1‑94 (MQ=60)
                                                                      TTCTTCAGCCGCTGATCTGGGTGCGGCTCTGGGTGCGCGGACGTAAGGCCCGGGCCTATCGGAAACGCTGGGGGGAACGTTATGGCTTATACCG                        >  SRR4302540.4919999/1‑94 (MQ=53)
                                                                      TTATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCG                        >  SRR4302540.219926/1‑94 (MQ=60)
                                                                       TATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGC                       <  SRR4302540.5750380/94‑1 (MQ=60)
                                                                       TATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGC                       >  SRR4302540.847790/1‑94 (MQ=60)
                                                                       TATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGC                       <  SRR4302540.5750377/94‑1 (MQ=60)
                                                                       TATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGAGAACGTTACGGTTTTTACCGC                       >  SRR4302540.868114/1‑94 (MQ=60)
                                                                        ATTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCC                      <  SRR4302540.7676579/94‑1 (MQ=60)
                                                                         TTCAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACTCTGGGGTGAAAGTTACGGTTTTTACCGCCA                     >  SRR4302540.2251894/1‑94 (MQ=60)
                                                                           CAGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATC                   <  SRR4302540.5167063/94‑1 (MQ=60)
                                                                            agcgcCTGATCTTGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCC                  <  SRR4302540.3631568/89‑1 (MQ=60)
                                                                            AGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAACCGCTGGGGGGAACGTTACGGTTTTTACCGCCATCC                  >  SRR4302540.8350033/1‑94 (MQ=60)
                                                                            AGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCC                  <  SRR4302540.437345/94‑1 (MQ=60)
                                                                            AGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCC                  <  SRR4302540.325180/94‑1 (MQ=60)
                                                                            AGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCC                  >  SRR4302540.3773361/1‑94 (MQ=60)
                                                                            AGCCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCC                  <  SRR4302540.8775971/94‑1 (MQ=60)
                                                                            AGCCGCTGATCTGGATGCGGCTCTGGGTGCGAGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCC                  <  SRR4302540.56570/94‑1 (MQ=60)
                                                                              CCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGC                <  SRR4302540.1202005/94‑1 (MQ=60)
                                                                              CCGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGC                >  SRR4302540.5773487/1‑94 (MQ=60)
                                                                               CGCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCT               >  SRR4302540.5287526/1‑94 (MQ=60)
                                                                                GCTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATGCGCTA              >  SRR4302540.6400915/1‑94 (MQ=60)
                                                                                 CTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAA             <  SRR4302540.2255177/94‑1 (MQ=60)
                                                                                 CTGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGCGAACGTTACGGTTTTTACCGCCATCCGCTAA             >  SRR4302540.9956090/1‑94 (MQ=60)
                                                                                  TGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAA            <  SRR4302540.2824713/94‑1 (MQ=60)
                                                                                  TGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAA            >  SRR4302540.8968334/1‑94 (MQ=60)
                                                                                  TGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAA            <  SRR4302540.451816/94‑1 (MQ=60)
                                                                                  TGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAA            >  SRR4302540.1158260/1‑94 (MQ=60)
                                                                                  TGATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAA            >  SRR4302540.133385/1‑94 (MQ=60)
                                                                                   GATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAA           <  SRR4302540.4320906/94‑1 (MQ=60)
                                                                                    ATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAAC          >  SRR4302540.8922747/1‑94 (MQ=60)
                                                                                    ATCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAAC          <  SRR4302540.443345/94‑1 (MQ=60)
                                                                                     TCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACC         <  SRR4302540.4022361/94‑1 (MQ=60)
                                                                                     TCTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACC         >  SRR4302540.9341040/1‑94 (MQ=60)
                                                                                      CTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCA        >  SRR4302540.9744836/1‑94 (MQ=60)
                                                                                      CTGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCA        <  SRR4302540.7032753/94‑1 (MQ=60)
                                                                                       TGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAG       <  SRR4302540.7746242/94‑1 (MQ=60)
                                                                                       TGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAG       <  SRR4302540.2442782/94‑1 (MQ=60)
                                                                                       TGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAG       <  SRR4302540.6981937/94‑1 (MQ=60)
                                                                                       TGGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAG       >  SRR4302540.4357857/1‑94 (MQ=60)
                                                                                        GGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGG      >  SRR4302540.354828/1‑94 (MQ=60)
                                                                                        GGATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCACG      >  SRR4302540.3396264/1‑94 (MQ=60)
                                                                                         GATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGGC     <  SRR4302540.9428828/94‑1 (MQ=60)
                                                                                         GATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGGC     <  SRR4302540.6551170/94‑1 (MQ=60)
                                                                                          ATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGGCG    <  SRR4302540.6901812/94‑1 (MQ=60)
                                                                                          ATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGGCG    <  SRR4302540.7220087/94‑1 (MQ=60)
                                                                                          ATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGGCG    <  SRR4302540.8869268/94‑1 (MQ=60)
                                                                                          ATGCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGGCG    <  SRR4302540.5901883/94‑1 (MQ=60)
                                                                                            GCGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGGCGGC  >  SRR4302540.494068/1‑94 (MQ=60)
                                                                                            |                                                                                             
AGAATCCCCAGCACATCCATAAGTCAGCTATTTACTATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATACGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGGCGGC  >  NC_000913/3806131‑3806316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑