Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,829,419	C→T	R446C (CGC→TGC)	yicH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,829,419	0	C	T	100.0%	1417.7 / NA	388	R446C (CGC→TGC)	yicH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (187/201); total (187/201)

Only 100 of 441 total aligned reads displayed.

ACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACC  >  NC_000913/3829329‑3829508

aCGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGc                                                                                         <  1:7767950/93‑1 (MQ=255)

     ggTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTTCCCGtg                                                                                    >  1:1291393/1‑92 (MQ=255)

     ggTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTc                                                                                    <  2:7064366/93‑1 (MQ=255)

       ttACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGc                                                                                  >  1:9017946/1‑93 (MQ=255)

       ttACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGCGGTGATGTTCGTTGCCCGTCGc                                                                                  >  2:909814/1‑93 (MQ=255)

        tACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCt                                                                                 >  1:4040481/1‑93 (MQ=255)

        tACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCt                                                                                 >  1:1900025/1‑93 (MQ=255)

         aCCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCTTGTTGATGTTTGTTGCCCGTCGCTg                                                                                >  2:7747238/1‑93 (MQ=255)

          ccGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTgg                                                                               <  1:5259764/93‑1 (MQ=255)

            gATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGgcg                                                                             >  1:9610700/1‑93 (MQ=255)

            gATCATAAATGGGGCGTCTGGAGTGGCTCCGCGAATCTGAATGCCGCCGCCGCGAACTTCAATCGTGTTGATGTTGGTTCGCCGTCGCTggag                                                                             >  2:5356792/1‑91 (MQ=255)

             gtCATAAATGGGGCGTCTGGAGGGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGgcgc                                                                            <  1:8265060/92‑1 (MQ=255)

             aTCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGgcgc                                                                            <  1:9428039/93‑1 (MQ=255)

              tCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCt                                                                           >  2:2181835/1‑93 (MQ=255)

              tCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCt                                                                           >  2:3697181/1‑93 (MQ=255)

                aTAAATGGGGCGTCTGGAGTGGCTCGGGGAATCTGAATGCCGCCGCCCCGACATTTAATCGCGTTGATGTTCGTTGCCCGCCGCTGGCGCTGa                                                                         >  2:2098129/1‑93 (MQ=255)

                 tAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATTCCGCCGCCGCGACATTCAATCGCGTTGATGTTCGTGGCCCGTCGCTGGCGCTggc                                                                        >  2:1679172/1‑91 (MQ=255)

                 tAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAc                                                                        >  2:6918588/1‑93 (MQ=255)

                  aaaTGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAcc                                                                       >  1:6048794/1‑93 (MQ=255)

                  aaaTGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAcc                                                                       >  2:98115/1‑93 (MQ=255)

                    aTGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGGCCGTCGCTGGGGCTGCCCGc                                                                     >  1:2818392/1‑93 (MQ=255)

                     tGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGcc                                                                    >  1:4490225/1‑93 (MQ=255)

                      ggggCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCa                                                                   <  1:6930346/93‑1 (MQ=255)

                      ggggCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCa                                                                   <  1:5929987/93‑1 (MQ=255)

                      ggggCGTCTGGAGTGGCACGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCa                                                                   <  2:4990141/93‑1 (MQ=255)

                         gCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCcaca                                                                >  1:8894944/1‑93 (MQ=255)

                         gCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCacaa                                                                >  2:7300420/1‑90 (MQ=255)

                         gCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAAca                                                                <  2:658395/93‑1 (MQ=255)

                            tCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAAcagca                                                             >  2:2290712/1‑93 (MQ=255)

                              tGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACagcagc                                                           <  2:1449064/93‑1 (MQ=255)

                              tGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACagcagc                                                           <  1:2022298/93‑1 (MQ=255)

                               ggAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAgcagca                                                          >  1:5797143/1‑93 (MQ=255)

                                gAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAc                                                         <  2:4304278/93‑1 (MQ=255)

                                 aGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACg                                                        <  1:559926/93‑1 (MQ=255)

                                 aGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACg                                                        <  2:7493315/93‑1 (MQ=255)

                                        cGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAata                                                 >  2:9489939/1‑93 (MQ=255)

                                            gAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAg                                             <  1:3651257/93‑1 (MQ=255)

                                            gAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAg                                             >  2:6248528/1‑93 (MQ=255)

                                            gAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAg                                             >  1:7488329/1‑93 (MQ=255)

                                            gAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAg                                             <  2:9007886/93‑1 (MQ=255)

                                            gAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAg                                             <  2:838740/93‑1 (MQ=255)

                                             aaTCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACAGCCAACAGCAGCACGGTGAATATCAGc                                            >  1:2903847/1‑93 (MQ=255)

                                              aTCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCg                                           >  2:5530516/1‑93 (MQ=255)

                                               tCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGa                                          <  2:3103026/93‑1 (MQ=255)

                                                cggAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGaa                                         <  1:4637176/91‑1 (MQ=255)

                                                 tGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAc                                        >  2:6070865/1‑93 (MQ=255)

                                                  gAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACt                                       >  2:4008854/1‑93 (MQ=255)

                                                  gAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACt                                       >  2:4399282/1‑93 (MQ=255)

                                                  gAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACt                                       >  1:1120963/1‑93 (MQ=255)

                                                  gAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACt                                       <  1:6189481/93‑1 (MQ=255)

                                                   aaTGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTg                                      >  2:3471088/1‑93 (MQ=255)

                                                   aaTGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTg                                      <  1:1069241/93‑1 (MQ=255)

                                                   aaTGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTg                                      >  1:5094779/1‑93 (MQ=255)

                                                     tGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAg                                    <  1:7377402/93‑1 (MQ=255)

                                                      gccgccgccGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGt                                   <  1:2471882/93‑1 (MQ=255)

                                                        cgccgccgcGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATCTCAGCGAAGTGAGTGc                                 >  2:7577/1‑93 (MQ=255)

                                                         gccgccgcGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCa                                <  2:8216626/93‑1 (MQ=255)

                                                          ccgccgcGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAt                               <  2:5196188/93‑1 (MQ=255)

                                                           cgccgcGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAtt                              <  1:9190318/93‑1 (MQ=255)

                                                           cgccgcGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAtt                              <  2:33182/93‑1 (MQ=255)

                                                            gccgcGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAttt                             <  1:10017455/93‑1 (MQ=255)

                                                             ccgcGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTa                            <  2:4709660/93‑1 (MQ=255)

                                                              cgcgACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTAc                           >  2:6514944/1‑93 (MQ=255)

                                                               gcgACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACt                          >  2:6379807/1‑93 (MQ=255)

                                                               gcgACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACt                          <  2:2700327/93‑1 (MQ=255)

                                                               gcgACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACt                          >  1:8835196/1‑93 (MQ=255)

                                                               gcgACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACt                          >  2:16387/1‑93 (MQ=255)

                                                                 gACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGa                        >  2:7997868/1‑93 (MQ=255)

                                                                  aCATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGaa                       >  1:8492547/1‑93 (MQ=255)

                                                                   cATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGaaa                      >  2:568384/1‑93 (MQ=255)

                                                                     ttCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCTAACTGAGTGCATTTACTGaaaaa                    <  1:2118624/93‑1 (MQ=255)

                                                                     ttCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGaaaaa                    <  2:8888773/93‑1 (MQ=255)

                                                                     ttCAATCGTGTTGATGTGCGTTGCCCGTCGCTGGCGCTGACCGCCAGCAGCAGCACGGTTAATATCAGCGAACTGAGTGCATTTACTGaaaaa                    <  1:2754363/93‑1 (MQ=255)

                                                                       cAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAgg                  <  2:3226342/93‑1 (MQ=255)

                                                                       cAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAgg                  >  1:3434390/1‑93 (MQ=255)

                                                                       cAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAgg                  >  2:4602694/1‑93 (MQ=255)

                                                                       cAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAgg                  <  1:7820310/93‑1 (MQ=255)

                                                                       cAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAgg                  >  2:5461135/1‑93 (MQ=255)

                                                                        aaTCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGc                 >  1:7146305/1‑93 (MQ=255)

                                                                         aTCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCa                >  2:1292474/1‑93 (MQ=255)

                                                                         aTCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCa                <  1:4328632/93‑1 (MQ=255)

                                                                           cGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCAtt              <  1:3891465/93‑1 (MQ=255)

                                                                           cGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCAtt              <  2:9384338/93‑1 (MQ=255)

                                                                             tgtTGATTTTAGTTGCCCGTCGCTGGAGCTGACCGCCAACAGCAGCACGGTGAATATAAGCGAACTGAGTGCATTTACTGAAAAATGCATTCt            <  1:2527645/93‑1 (MQ=255)

                                                                             tgtTGATGTACGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCt            >  2:6736948/1‑93 (MQ=255)

                                                                               ttGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTgg          <  1:2177872/93‑1 (MQ=255)

                                                                               ttGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTgg          >  1:8665368/1‑93 (MQ=255)

                                                                               ttGATGTGCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTgg          <  1:3226393/93‑1 (MQ=255)

                                                                                tGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCGAGCAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGa         <  1:4755662/93‑1 (MQ=255)

                                                                                tGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGa         <  2:990211/93‑1 (MQ=255)

                                                                                tGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGa         >  1:4163084/1‑93 (MQ=255)

                                                                                tGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGa         >  2:5894289/1‑93 (MQ=255)

                                                                                tGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGa         >  1:5521300/1‑93 (MQ=255)

                                                                                tGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGa         <  1:6594322/93‑1 (MQ=255)

                                                                                 gATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGaa        >  1:9958862/1‑93 (MQ=255)

                                                                                  aTGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAg       <  1:5313694/93‑1 (MQ=255)

                                                                                    gTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGcc     >  1:1459943/1‑93 (MQ=255)

                                                                                     ttCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCa    >  1:6264926/1‑93 (MQ=255)

                                                                                      tcgttgCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAc   <  1:6232501/93‑1 (MQ=255)

                                                                                      tcgttgCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAc   >  2:2981490/1‑93 (MQ=255)

ACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACC  >  NC_000913/3829329‑3829508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 244 total aligned reads displayed.

CTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCA  >  NC_000913/3829326‑3829512

CTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTT                                                                                               <  SRR4302540.6137494/94‑1 (MQ=60)

CTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTT                                                                                               <  SRR4302540.841223/94‑1 (MQ=60)

 TGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTG                                                                                              <  SRR4302540.8617953/94‑1 (MQ=60)

 TGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTG                                                                                              <  SRR4302540.1358385/94‑1 (MQ=60)

  GACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGC                                                                                             >  SRR4302540.8703689/1‑94 (MQ=60)

   ACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCC                                                                                            <  SRR4302540.5771348/94‑1 (MQ=60)

   ACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCC                                                                                            <  SRR4302540.7858762/94‑1 (MQ=60)

    CGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCC                                                                                           >  SRR4302540.9815769/1‑94 (MQ=60)

    CGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCC                                                                                           >  SRR4302540.1324447/1‑94 (MQ=60)

       TGTTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTC                                                                                        <  SRR4302540.9010801/94‑1 (MQ=60)

         GTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGC                                                                                      >  SRR4302540.9126155/1‑94 (MQ=60)

         GTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGC                                                                                      >  SRR4302540.9126154/1‑94 (MQ=60)

          TTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCT                                                                                     >  SRR4302540.4084038/1‑94 (MQ=60)

          TTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCT                                                                                     <  SRR4302540.8990433/94‑1 (MQ=60)

            ACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAACATGAATGCCGCCGGCGCGACATTCAATCGTGTTGATGTTTGTTGTCCGTCCCTGG                                                                                   >  SRR4302540.6189358/1‑94 (MQ=60)

             CCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGC                                                                                  >  SRR4302540.910261/1‑94 (MQ=60)

             CCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGC                                                                                  >  SRR4302540.7438038/1‑94 (MQ=60)

             CCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGC                                                                                  <  SRR4302540.5317153/94‑1 (MQ=60)

              CGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCG                                                                                 >  SRR4302540.9724019/1‑94 (MQ=60)

                ATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCT                                                                               <  SRR4302540.9540053/94‑1 (MQ=60)

                ATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCT                                                                               >  SRR4302540.1991259/1‑94 (MQ=60)

                ATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCT                                                                               <  SRR4302540.8094959/94‑1 (MQ=60)

                ATCATAAATGGGGCGTCTGGAGGGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCT                                                                               <  SRR4302540.2271174/94‑1 (MQ=60)

                 TCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTG                                                                              >  SRR4302540.62691/1‑94 (MQ=60)

                  CATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGA                                                                             >  SRR4302540.8605561/1‑94 (MQ=60)

                  CATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGGTCGTTGCCCGTCGCTGGCGCTGA                                                                             >  SRR4302540.8745381/1‑94 (MQ=60)

                   ATAAATGGGTCGTGTTGAGTGGCTTGGCGAATCTGAATGCCGCCGCCGCGACCTTCAATCGTGTTGATGTTGGTTGCCCGTCGCTGGCGCTGAC                                                                            <  SRR4302540.2832061/94‑1 (MQ=60)

                   ATAAATGGGGCGTCTGGAGTGGCTCGGCGGATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAC                                                                            >  SRR4302540.2143383/1‑94 (MQ=60)

                   ATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAC                                                                            <  SRR4302540.2517981/94‑1 (MQ=60)

                   ATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAC                                                                            <  SRR4302540.2068276/94‑1 (MQ=60)

                   ATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAC                                                                            <  SRR4302540.706908/94‑1 (MQ=60)

                   ATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAC                                                                            >  SRR4302540.7663009/1‑94 (MQ=60)

                   ATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCCCCGCCGCGGCATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAC                                                                            >  SRR4302540.7663006/1‑94 (MQ=60)

                    TAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACC                                                                           >  SRR4302540.6116003/1‑94 (MQ=60)

                     AAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCG                                                                          <  SRR4302540.2175143/94‑1 (MQ=60)

                     AAATGGGGCGTCTGGAGTGGCTCGGCGAATCTCAATGCCGCCGCCGCGACATTCAATCGAGTTGCTGTTTGTTGCCCGTCccgcggcttgaccg                                                                          >  SRR4302540.3133865/1‑80 (MQ=60)

                      AATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGGCCGTCGCTGGGGCTGCCCGC                                                                         >  SRR4302540.2848838/1‑94 (MQ=60)

                      AATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGC                                                                         <  SRR4302540.7495104/94‑1 (MQ=60)

                       ATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCC                                                                        >  SRR4302540.4538917/1‑94 (MQ=60)

                         GGGGGGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAA                                                                      <  SRR4302540.1914335/94‑1 (MQ=60)

                         GGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAA                                                                      <  SRR4302540.5995513/94‑1 (MQ=60)

                         GGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAA                                                                      <  SRR4302540.5300242/94‑1 (MQ=60)

                         GGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAA                                                                      <  SRR4302540.7007468/94‑1 (MQ=60)

                           GGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCCACA                                                                    >  SRR4302540.8997905/1‑94 (MQ=60)

                             CGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGC                                                                  >  SRR4302540.8835630/1‑94 (MQ=60)

                             CGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACACC                                                                  >  SRR4302540.2557217/1‑94 (MQ=60)

                              GTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCA                                                                 <  SRR4302540.4739405/94‑1 (MQ=60)

                               TCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAG                                                                >  SRR4302540.5119062/1‑94 (MQ=60)

                               TCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAG                                                                >  SRR4302540.853047/1‑94 (MQ=60)

                                CTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGC                                                               >  SRR4302540.1957432/1‑94 (MQ=60)

                                CTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGC                                                               >  SRR4302540.6996447/1‑94 (MQ=60)

                                CTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGC                                                               >  SRR4302540.1919223/1‑94 (MQ=60)

                                CTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGC                                                               >  SRR4302540.4595296/1‑94 (MQ=60)

                                 TGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCA                                                              <  SRR4302540.7223026/94‑1 (MQ=60)

                                 TGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCA                                                              <  SRR4302540.2044156/94‑1 (MQ=60)

                                 TGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCA                                                              >  SRR4302540.5861201/1‑94 (MQ=60)

                                 TGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCA                                                              <  SRR4302540.1896672/94‑1 (MQ=60)

                                 TGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCA                                                              >  SRR4302540.4349479/1‑94 (MQ=60)

                                  GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGGGCTGCCCGCCAACAGCAGCAC                                                             >  SRR4302540.71224/1‑94 (MQ=60)

                                  GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAC                                                             >  SRR4302540.5861588/1‑94 (MQ=60)

                                  GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAC                                                             <  SRR4302540.2926333/94‑1 (MQ=60)

                                  GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAC                                                             <  SRR4302540.2503788/94‑1 (MQ=60)

                                  GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAC                                                             <  SRR4302540.6943739/94‑1 (MQ=60)

                                  GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAC                                                             >  SRR4302540.8918107/1‑94 (MQ=60)

                                    AGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGG                                                           <  SRR4302540.566015/94‑1 (MQ=60)

                                    AGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGG                                                           <  SRR4302540.3523592/94‑1 (MQ=60)

                                    AGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGG                                                           <  SRR4302540.1190571/94‑1 (MQ=60)

                                     GTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGT                                                          >  SRR4302540.3766352/1‑94 (MQ=60)

                                     GTGGCTCGGAGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGT                                                          <  SRR4302540.4593975/94‑1 (MQ=60)

                                      TGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTG                                                         >  SRR4302540.290708/1‑94 (MQ=60)

                                      TGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTG                                                         <  SRR4302540.263141/94‑1 (MQ=60)

                                       GGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGA                                                        >  SRR4302540.505599/1‑94 (MQ=60)

                                        GCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAA                                                       <  SRR4302540.4341235/94‑1 (MQ=60)

                                        GCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAA                                                       <  SRR4302540.8862134/94‑1 (MQ=60)

                                          TCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATA                                                     >  SRR4302540.1049387/1‑94 (MQ=60)

                                          TCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATA                                                     >  SRR4302540.6029051/1‑94 (MQ=60)

                                           CGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATAT                                                    >  SRR4302540.938330/1‑94 (MQ=60)

                                           CGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATAT                                                    >  SRR4302540.9751246/1‑94 (MQ=60)

                                            GGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATC                                                   <  SRR4302540.6156465/94‑1 (MQ=60)

                                             GCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCA                                                  <  SRR4302540.3240270/94‑1 (MQ=60)

                                              CGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG                                                 >  SRR4302540.7571923/1‑94 (MQ=60)

                                              CGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG                                                 >  SRR4302540.2516058/1‑94 (MQ=60)

                                              CGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG                                                 <  SRR4302540.205103/94‑1 (MQ=60)

                                              CGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG                                                 >  SRR4302540.4623600/1‑94 (MQ=60)

                                               GAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGC                                                <  SRR4302540.5550790/94‑1 (MQ=60)

                                               GAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGC                                                <  SRR4302540.6192293/94‑1 (MQ=60)

                                               GAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGC                                                <  SRR4302540.3691252/94‑1 (MQ=60)

                                               GAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGC                                                >  SRR4302540.4719218/1‑94 (MQ=60)

                                               GAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACAGCCAACAGCAGCACGGTGAATATCAGC                                                >  SRR4302540.2935544/1‑94 (MQ=60)

                                                AATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCG                                               >  SRR4302540.7905699/1‑94 (MQ=60)

                                                  TCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAA                                             <  SRR4302540.9308880/94‑1 (MQ=60)

                                                   CTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAC                                            <  SRR4302540.28022/94‑1 (MQ=60)

                                                   CTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAC                                            <  SRR4302540.5582701/94‑1 (MQ=60)

                                                   CTGAAGGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAC                                            <  SRR4302540.6069862/94‑1 (MQ=60)

                                                   CGGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAC                                            <  SRR4302540.4686823/94‑1 (MQ=60)

                                                    TGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACT                                           >  SRR4302540.1132596/1‑94 (MQ=60)

                                                    TGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACT                                           <  SRR4302540.6334428/94‑1 (MQ=60)

                                                     GAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTG                                          <  SRR4302540.8548713/94‑1 (MQ=60)

                                                     GAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTG                                          <  SRR4302540.4020799/94‑1 (MQ=60)

                                                     GAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTG                                          <  SRR4302540.2873621/94‑1 (MQ=60)

                                                     GAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTG                                          >  SRR4302540.5149902/1‑94 (MQ=60)

                                                     GAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTG                                          <  SRR4302540.2231251/94‑1 (MQ=60)

                                                     GAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTG                                          <  SRR4302540.6258391/94‑1 (MQ=60)

                                                      AATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGA                                         >  SRR4302540.6320603/1‑94 (MQ=60)

                                                      AATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGA                                         >  SRR4302540.4015770/1‑94 (MQ=60)

                                                      AATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGA                                         <  SRR4302540.1080138/94‑1 (MQ=60)

                                                       ATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAG                                        <  SRR4302540.808701/94‑1 (MQ=60)

                                                       ATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAG                                        >  SRR4302540.3871699/1‑94 (MQ=60)

                                                        TGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT                                       <  SRR4302540.7459615/94‑1 (MQ=60)

                                                        TGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT                                       <  SRR4302540.7665638/94‑1 (MQ=60)

                                                        TGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT                                       <  SRR4302540.4449114/94‑1 (MQ=60)

                                                        TGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGG                                       >  SRR4302540.540858/1‑94 (MQ=60)

                                                        TGCCGCCGCCGCGACATTCAATCGTGGTGAGGTTCGTTGCCCGGCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT                                       <  SRR4302540.7665639/94‑1 (MQ=60)

                                                        TCCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT                                       <  SRR4302540.1449661/94‑1 (MQ=60)

                                                         GCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTG                                      <  SRR4302540.6529893/94‑1 (MQ=60)

                                                         GCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTG                                      <  SRR4302540.1665636/94‑1 (MQ=60)

                                                          CCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACCGTAGCACGGTGAATATCAGCGCACTGAGGGC                                     >  SRR4302540.5890507/1‑94 (MQ=60)

                                                           CGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCA                                    <  SRR4302540.4425443/94‑1 (MQ=60)

                                                            GCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAT                                   >  SRR4302540.4227461/1‑94 (MQ=60)

                                                            GCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAT                                   <  SRR4302540.5426536/94‑1 (MQ=60)

                                                             CCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATT                                  <  SRR4302540.6334808/94‑1 (MQ=60)

                                                             CCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATT                                  <  SRR4302540.7890692/94‑1 (MQ=60)

                                                              CGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTT                                 <  SRR4302540.9300539/94‑1 (MQ=60)

                                                              CGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTT                                 >  SRR4302540.507621/1‑94 (MQ=60)

                                                               GCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTA                                <  SRR4302540.10134053/94‑1 (MQ=60)

                                                               GCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTA                                <  SRR4302540.6260703/94‑1 (MQ=60)

                                                               GCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTA                                >  SRR4302540.3428363/1‑94 (MQ=60)

                                                                CCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTAC                               >  SRR4302540.5637351/1‑94 (MQ=60)

                                                                CCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTAC                               <  SRR4302540.2415214/94‑1 (MQ=60)

                                                                CCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAAAAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTAT                               >  SRR4302540.1238927/1‑94 (MQ=60)

                                                                CAGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTAC                               <  SRR4302540.9439938/94‑1 (MQ=60)

                                                                 CGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACT                              >  SRR4302540.5992172/1‑94 (MQ=60)

                                                                 CGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACT                              >  SRR4302540.8438837/1‑94 (MQ=60)

                                                                 CGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACT                              >  SRR4302540.3318483/1‑94 (MQ=60)

                                                                 CGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACT                              >  SRR4302540.531950/1‑94 (MQ=60)

                                                                 CGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACT                              >  SRR4302540.8937390/1‑94 (MQ=60)

                                                                 CGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACT                              <  SRR4302540.7064704/94‑1 (MQ=60)

                                                                 CGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACT                              >  SRR4302540.4213642/1‑94 (MQ=60)

                                                                  CCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTG                             <  SRR4302540.907502/94‑1 (MQ=60)

                                                                   CGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGA                            >  SRR4302540.1087924/1‑94 (MQ=60)

                                                                    GACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAA                           >  SRR4302540.8591223/1‑94 (MQ=60)

                                                                    GACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAA                           <  SRR4302540.403328/94‑1 (MQ=60)

                                                                     ACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAA                          >  SRR4302540.2829226/1‑94 (MQ=60)

                                                                      CATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAA                         >  SRR4302540.4756179/1‑94 (MQ=60)

                                                                      CATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAA                         <  SRR4302540.1029234/94‑1 (MQ=60)

                                                                       ATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCCGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAA                        >  SRR4302540.8991758/1‑94 (MQ=60)

                                                                       ATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAA                        >  SRR4302540.5647746/1‑94 (MQ=60)

                                                                        TTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCTAACTGAGTGCATTTACTGAAAAAG                       <  SRR4302540.2141363/94‑1 (MQ=60)

                                                                        TTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAG                       <  SRR4302540.1245125/94‑1 (MQ=60)

                                                                        TTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAG                       <  SRR4302540.3854830/94‑1 (MQ=60)

                                                                        TTCAATCGTGTTGATGTGCGTTGCCCGTCGCTGGCGCTGACCGCCAGCAGCAGCACGGTTAATATCAGCGAACTGAGTGCATTTACTGAAAAAG                       <  SRR4302540.2784129/94‑1 (MQ=60)

                                                                        ATCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAG                       <  SRR4302540.2141364/94‑1 (MQ=60)

                                                                         TCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGG                      >  SRR4302540.3471727/1‑94 (MQ=60)

                                                                          CAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGC                     >  SRR4302540.7225934/1‑94 (MQ=60)

                                                                          CAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGC                     >  SRR4302540.3283563/1‑94 (MQ=60)

                                                                          CAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGC                     <  SRR4302540.4206143/94‑1 (MQ=60)

                                                                          CAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGC                     <  SRR4302540.7911703/94‑1 (MQ=60)

                                                                          CAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGC                     >  SRR4302540.6153402/1‑94 (MQ=60)

                                                                           AATCGTGTTGATGTTCGTTGCCGGTCGCTGGCGCTGACCGCCAGAAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCA                    <  SRR4302540.5161325/94‑1 (MQ=60)

                                                                            ATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCAT                   <  SRR4302540.4375755/94‑1 (MQ=60)

                                                                            ATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGAACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCAT                   >  SRR4302540.6795959/1‑94 (MQ=60)

                                                                             ACGTGTTGATGTTCGTTGCCCGGCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATT                  <  SRR4302540.2626041/94‑1 (MQ=60)

                                                                              CGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTC                 >  SRR4302540.788412/1‑94 (MQ=60)

                                                                              CGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTC                 <  SRR4302540.3933716/94‑1 (MQ=60)

                                                                              CGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTC                 <  SRR4302540.3527558/94‑1 (MQ=60)

                                                                              CGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTC                 <  SRR4302540.5763874/94‑1 (MQ=60)

                                                                              CGTGTGGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTC                 <  SRR4302540.9161074/94‑1 (MQ=60)

                                                                               GTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCT                >  SRR4302540.967858/1‑94 (MQ=60)

                                                                                TGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTG               <  SRR4302540.1119388/94‑1 (MQ=60)

                                                                                TGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTG               <  SRR4302540.6437107/94‑1 (MQ=60)

                                                                                 GTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGG              <  SRR4302540.1948578/94‑1 (MQ=60)

                                                                                 GTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGG              >  SRR4302540.631958/1‑94 (MQ=60)

                                                                                  TTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGA             >  SRR4302540.4208210/1‑94 (MQ=60)

                                                                                  TTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGA             <  SRR4302540.2201360/94‑1 (MQ=60)

                                                                                  TTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGA             >  SRR4302540.5582100/1‑94 (MQ=60)

                                                                                  TTGATGTGCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGA             <  SRR4302540.3261468/94‑1 (MQ=60)

                                                                                   TGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAA            <  SRR4302540.6667356/94‑1 (MQ=60)

                                                                                   TGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAA            >  SRR4302540.10075085/1‑94 (MQ=60)

                                                                                    GATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGTAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAC           >  SRR4302540.1385798/1‑94 (MQ=60)

                                                                                    GATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAG           <  SRR4302540.9619930/94‑1 (MQ=60)

                                                                                     ATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGC          <  SRR4302540.5371879/94‑1 (MQ=60)

                                                                                     ATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGC          >  SRR4302540.749213/1‑94 (MQ=60)

                                                                                     ATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGC          <  SRR4302540.3127468/94‑1 (MQ=60)

                                                                                     ATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGC          <  SRR4302540.5371880/94‑1 (MQ=60)

                                                                                     ATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGC          >  SRR4302540.319827/1‑94 (MQ=60)

                                                                                      TGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCC         >  SRR4302540.6353375/1‑94 (MQ=60)

                                                                                        TTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAC       >  SRR4302540.2526115/1‑94 (MQ=60)

                                                                                        TTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAC       <  SRR4302540.5221561/94‑1 (MQ=60)

                                                                                         TCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACC      <  SRR4302540.6301817/94‑1 (MQ=60)

                                                                                         TCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACC      >  SRR4302540.4108186/1‑94 (MQ=60)

                                                                                          CGTTGCCCGTCTCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGTACTGAGTGCATTGACTGAAAATGGCATTCTGGAAGCCACCC     >  SRR4302540.9079605/1‑94 (MQ=60)

                                                                                          CGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCG     >  SRR4302540.1366205/1‑94 (MQ=60)

                                                                                           GTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGC    >  SRR4302540.10067823/1‑94 (MQ=60)

                                                                                           GTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGC    >  SRR4302540.9220379/1‑94 (MQ=60)

                                                                                           GTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGC    >  SRR4302540.9220378/1‑94 (MQ=60)

                                                                                           GTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGGGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGC    >  SRR4302540.8145812/1‑94 (MQ=60)

                                                                                            TTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCC   <  SRR4302540.9859027/94‑1 (MQ=60)

                                                                                             TGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCA  >  SRR4302540.8334342/1‑94 (MQ=60)

                                                                                             TGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCA  >  SRR4302540.1065358/1‑94 (MQ=60)

                                                                                             TGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCA  >  SRR4302540.10155552/1‑94 (MQ=60)

CTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCA  >  NC_000913/3829326‑3829512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`