Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,829,919	T→C	D749G (GAC→GGC)	yicI ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,829,919	0	T	C	93.4%	1396.4 / 62.8	498	D749G (GAC→GGC)	yicI	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (24/9); new base C (235/230); total (259/239)
Fisher's exact test for biased strand distribution p-value = 1.80e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 512 total aligned reads displayed.

GGCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGT  >  NC_000913/3829829‑3830010

 gCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCtt                                                                                          <  2:5109884/93‑1 (MQ=255)

   cttCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGc                                                                                        <  1:8688613/92‑1 (MQ=255)

   aTTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGc                                                                                        <  1:6429935/93‑1 (MQ=255)

    ttCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCa                                                                                       >  2:7545394/1‑93 (MQ=255)

    ttCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCa                                                                                       <  1:8896924/93‑1 (MQ=255)

    ttCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCa                                                                                       <  1:2926104/93‑1 (MQ=255)

    ttCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCa                                                                                       >  2:2028230/1‑93 (MQ=255)

    gtCCATCAATAGATTACAACGTAATTGTCTGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGTTCACTTTCAGCCTGTGAACCGCCTTGCa                                                                                       >  1:8973579/2‑93 (MQ=255)

      ccATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGa                                                                                     <  1:7584685/93‑1 (MQ=255)

        aTCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGAcc                                                                                   >  1:4867383/1‑93 (MQ=255)

         tCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGAcct                                                                                  >  2:2824647/1‑92 (MQ=255)

         tCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCa                                                                                  <  2:830563/93‑1 (MQ=255)

         tCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCa                                                                                  >  1:472083/1‑93 (MQ=255)

         tCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCa                                                                                  >  2:1901142/1‑93 (MQ=255)

            aTAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCAttt                                                                               >  2:9009298/1‑93 (MQ=255)

             tAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTa                                                                              >  2:4538170/1‑93 (MQ=255)

             tAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTa                                                                              >  2:2370981/1‑93 (MQ=255)

              aGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTAc                                                                             <  1:2362220/93‑1 (MQ=255)

               gATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACt                                                                            >  1:129554/1‑93 (MQ=255)

                aTTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACtt                                                                           <  2:3659725/93‑1 (MQ=255)

                aTTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACtt                                                                           >  1:187429/1‑93 (MQ=255)

                aTTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACtt                                                                           >  1:1188061/1‑93 (MQ=255)

                aTTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACAATTTACtt                                                                           >  1:2804996/1‑93 (MQ=255)

                  tACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTc                                                                         <  2:4607715/93‑1 (MQ=255)

                   aCAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTca                                                                        >  2:5750743/1‑93 (MQ=255)

                    cAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTcac                                                                       >  2:1643091/1‑93 (MQ=255)

                     aaCGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTcaca                                                                      <  2:1336081/93‑1 (MQ=255)

                     aaCGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTcaca                                                                      <  2:466791/93‑1 (MQ=255)

                      aCGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCacaa                                                                     <  1:7197916/93‑1 (MQ=255)

                      aCGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCacaa                                                                     >  1:6621427/1‑93 (MQ=255)

                         tAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACAt                                                                  <  2:919519/93‑1 (MQ=255)

                         tAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACAt                                                                  <  2:779965/93‑1 (MQ=255)

                          aaTTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACAtt                                                                 <  1:3135786/93‑1 (MQ=255)

                           aTTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTg                                                                <  2:1050672/93‑1 (MQ=255)

                           aTTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTg                                                                <  1:9584581/93‑1 (MQ=255)

                           aTTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTg                                                                <  2:4117868/93‑1 (MQ=255)

                            ttGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTgc                                                               >  1:4161211/1‑93 (MQ=255)

                            ttGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTgc                                                               >  2:6395152/1‑93 (MQ=255)

                            ttGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTgc                                                               <  2:3221276/93‑1 (MQ=255)

                               tCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCGCTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCa                                                            <  1:8352515/93‑1 (MQ=255)

                               tCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCa                                                            <  1:6353556/93‑1 (MQ=255)

                               tCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCa                                                            <  2:5379407/93‑1 (MQ=255)

                                cAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAg                                                           <  1:9797368/93‑1 (MQ=255)

                                cAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAg                                                           <  1:5889507/93‑1 (MQ=255)

                                  gcgcATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGc                                                         >  2:7624647/1‑93 (MQ=255)

                                  gcgcATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGc                                                         <  2:7069049/93‑1 (MQ=255)

                                  gcgcATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGc                                                         >  1:6151262/1‑93 (MQ=255)

                                   cgcATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGca                                                        <  2:1769832/93‑1 (MQ=255)

                                    gcATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGcac                                                       >  2:3123034/1‑93 (MQ=255)

                                    gcATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGcac                                                       <  2:2596209/93‑1 (MQ=255)

                                     cATTCGCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGcaca                                                      <  1:8127248/93‑1 (MQ=255)

                                     cATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGcaca                                                      <  2:7400236/93‑1 (MQ=255)

                                      aTTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAg                                                     >  1:560956/1‑93 (MQ=255)

                                      aTTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAg                                                     >  1:376173/1‑93 (MQ=255)

                                       ttCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAgt                                                    >  2:8798414/1‑93 (MQ=255)

                                       ttCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAgt                                                    >  2:5554451/1‑93 (MQ=255)

                                        tCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAgtg                                                   <  1:6901443/93‑1 (MQ=255)

                                         cccTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAgtgt                                                  >  2:9484073/1‑93 (MQ=255)

                                         cccTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAgtgc                                                  >  1:2643012/1‑92 (MQ=255)

                                           cTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTcc                                                >  2:5035462/1‑93 (MQ=255)

                                            ttGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCa                                               <  1:6665784/93‑1 (MQ=255)

                                              gAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGt                                             >  1:4391788/1‑93 (MQ=255)

                                              gAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGt                                             <  2:9379112/93‑1 (MQ=255)

                                                ggCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttc                                           >  1:8546739/1‑93 (MQ=255)

                                                 gCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttct                                          <  2:3867239/93‑1 (MQ=255)

                                                 gCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttct                                          <  1:6477889/93‑1 (MQ=255)

                                                   ttCCCCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttcttc                                        <  2:6935851/93‑1 (MQ=255)

                                                   ttCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttcttc                                        >  1:3989205/1‑93 (MQ=255)

                                                   ttCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttcttc                                        <  1:4547788/93‑1 (MQ=255)

                                                     caccacCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTtcgc                                      >  1:3459110/1‑93 (MQ=255)

                                                      cccaccaGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTtcgcc                                     <  1:1970073/92‑1 (MQ=255)

                                                      accaccAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTtcgcc                                     >  2:486878/1‑93 (MQ=255)

                                                       ccaccaGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTtcgcct                                    <  2:9594339/93‑1 (MQ=255)

                                                       ccaccaGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTtcgcct                                    <  2:6327602/93‑1 (MQ=255)

                                                         accaGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTtcgcctcg                                  >  1:769313/1‑93 (MQ=255)

                                                                ccTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCAc                           >  2:8492887/1‑93 (MQ=255)

                                                                ccTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCAc                           >  2:7112946/1‑93 (MQ=255)

                                                                 cTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCAcc                          >  2:1220428/1‑93 (MQ=255)

                                                                 cTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCAcc                          >  2:3384279/1‑93 (MQ=255)

                                                                  tGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCa                         <  2:8054235/93‑1 (MQ=255)

                                                                  tGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCa                         >  1:2895323/1‑93 (MQ=255)

                                                                  tGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCa                         <  1:1625700/93‑1 (MQ=255)

                                                                  tGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCAACa                         >  2:5828041/1‑93 (MQ=255)

                                                                     tCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTc                      <  1:7980569/93‑1 (MQ=255)

                                                                      cACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGCca                     >  2:9731230/1‑93 (MQ=255)

                                                                       aCTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTcac                    >  1:6236328/1‑93 (MQ=255)

                                                                        cTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTcaca                   <  2:4320857/93‑1 (MQ=255)

                                                                          ttCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGt                 >  1:10004082/1‑93 (MQ=255)

                                                                          gtCAGCCTGCGAACCTCCTTGCAGACGATTTACTTTCACAACAGTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGt                 <  2:1470443/92‑1 (MQ=255)

                                                                            cAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTaa               >  2:6190501/1‑93 (MQ=255)

                                                                            cAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTaa               <  2:354444/93‑1 (MQ=255)

                                                                             aGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAAt              >  1:5795653/1‑93 (MQ=255)

                                                                             aGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAAt              <  1:1040959/93‑1 (MQ=255)

                                                                              gCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATc             <  2:3008802/93‑1 (MQ=255)

                                                                                 tGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCgtg          >  1:5131135/1‑93 (MQ=255)

                                                                                  gCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCgtgt         <  1:7470921/93‑1 (MQ=255)

                                                                                  gCGAACCGCCTTGCAGACCATTTACTTCCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCgtgt         <  1:5320038/93‑1 (MQ=255)

                                                                                     aaCCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGc      >  1:3343373/1‑93 (MQ=255)

                                                                                     aaCCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGGCCAGTTCTTCGCCTCGCCCGCACCAATCACACTAATCGTGTTgt      >  2:2258107/1‑92 (MQ=255)

                                                                                       ccGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCa    >  2:6560212/1‑93 (MQ=255)

GGCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGT  >  NC_000913/3829829‑3830010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 270 total aligned reads displayed.

CCCGGCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTAC  >  NC_000913/3829826‑3830012

CCCGGCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGC                                                                                               >  SRR4302540.1658921/1‑94 (MQ=60)

CCCGGCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGC                                                                                               <  SRR4302540.9176865/94‑1 (MQ=60)

  CGGCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCT                                                                                             <  SRR4302540.327101/94‑1 (MQ=60)

   GGCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGTCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTT                                                                                            <  SRR4302540.1847579/94‑1 (MQ=60)

   GGCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTT                                                                                            >  SRR4302540.8950202/1‑94 (MQ=60)

    GCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTG                                                                                           <  SRR4302540.9734906/94‑1 (MQ=60)

    GCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTG                                                                                           >  SRR4302540.6447701/1‑94 (MQ=60)

     CATTCCATCAATAGATTTCAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTTC                                                                                          >  SRR4302540.3369357/1‑94 (MQ=60)

      CTTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCA                                                                                         <  SRR4302540.8789495/94‑1 (MQ=60)

      ATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGATGCTTCACCACCAGCCCCTGCTCACTTTCAGCTTGCGAATCGTCTTGCA                                                                                         >  SRR4302540.9071247/1‑94 (MQ=60)

      ATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCA                                                                                         <  SRR4302540.6501507/94‑1 (MQ=60)

      ATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCA                                                                                         >  SRR4302540.5232607/1‑94 (MQ=60)

      ATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCA                                                                                         >  SRR4302540.9274852/1‑94 (MQ=60)

      ATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCA                                                                                         >  SRR4302540.6786279/1‑94 (MQ=60)

      ATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCA                                                                                         <  SRR4302540.6501506/94‑1 (MQ=60)

       TTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAG                                                                                        >  SRR4302540.6706114/1‑94 (MQ=60)

       TTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAG                                                                                        <  SRR4302540.2958177/94‑1 (MQ=60)

       TTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAG                                                                                        <  SRR4302540.287860/94‑1 (MQ=60)

       TTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAG                                                                                        <  SRR4302540.8999911/94‑1 (MQ=60)

       TTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAG                                                                                        <  SRR4302540.8999912/94‑1 (MQ=60)

        TCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGA                                                                                       <  SRR4302540.6197264/94‑1 (MQ=60)

         CCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGAC                                                                                      >  SRR4302540.4537595/1‑94 (MQ=60)

         CCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGAC                                                                                      <  SRR4302540.7669839/94‑1 (MQ=60)

          CATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACC                                                                                     <  SRR4302540.6056750/94‑1 (MQ=60)

          CATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACC                                                                                     >  SRR4302540.4919582/1‑94 (MQ=60)

           ATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCCCCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCA                                                                                    <  SRR4302540.9354068/94‑1 (MQ=60)

           ATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCA                                                                                    >  SRR4302540.5867936/1‑94 (MQ=60)

           ATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCA                                                                                    >  SRR4302540.477141/1‑94 (MQ=60)

            TCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCAT                                                                                   <  SRR4302540.1991531/94‑1 (MQ=60)

               ATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCTCCTGCTCACTTTCAGCCTGCGAACTGCCTTGCAGATCATTTA                                                                                >  SRR4302540.9077906/1‑94 (MQ=60)

                TAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTAC                                                                               <  SRR4302540.574359/94‑1 (MQ=60)

                 AGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACT                                                                              >  SRR4302540.1487758/1‑94 (MQ=60)

                 AGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACT                                                                              >  SRR4302540.130919/1‑94 (MQ=60)

                  GATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTT                                                                             >  SRR4302540.1200309/1‑94 (MQ=60)

                  GATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTT                                                                             <  SRR4302540.2481508/94‑1 (MQ=60)

                  GATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACAATTTACTT                                                                             >  SRR4302540.2835292/1‑94 (MQ=60)

                   ATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTT                                                                            >  SRR4302540.1082563/1‑94 (MQ=60)

                    TTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTC                                                                           <  SRR4302540.7624809/94‑1 (MQ=60)

                    TTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTC                                                                           <  SRR4302540.1937268/94‑1 (MQ=60)

                    TTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTC                                                                           >  SRR4302540.4393781/1‑94 (MQ=60)

                     TACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCA                                                                          >  SRR4302540.6829012/1‑94 (MQ=60)

                     TACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCA                                                                          <  SRR4302540.9730490/94‑1 (MQ=60)

                     TACAACGTAATTGTCAGCGCATTCCCTTGAGGATTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCA                                                                          >  SRR4302540.4422219/1‑94 (MQ=60)

                      ACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCAC                                                                         <  SRR4302540.274782/94‑1 (MQ=60)

                      ACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCAC                                                                         <  SRR4302540.274783/94‑1 (MQ=60)

                      ACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCAC                                                                         >  SRR4302540.8277410/1‑94 (MQ=60)

                       CAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACA                                                                        <  SRR4302540.9565928/94‑1 (MQ=60)

                          CGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGTGAACCGCCTTGCAGACCATTTACTTTCACAACA                                                                     <  SRR4302540.6548205/94‑1 (MQ=60)

                          CGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACA                                                                     >  SRR4302540.10053492/1‑94 (MQ=60)

                          CGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACA                                                                     >  SRR4302540.3391893/1‑94 (MQ=60)

                          CGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACA                                                                     >  SRR4302540.6398844/1‑94 (MQ=60)

                           GTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACAT                                                                    >  SRR4302540.1225879/1‑94 (MQ=60)

                           GTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACAT                                                                    >  SRR4302540.1406290/1‑94 (MQ=60)

                           GTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACAT                                                                    <  SRR4302540.288056/94‑1 (MQ=60)

                            TAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATT                                                                   <  SRR4302540.10163222/94‑1 (MQ=60)

                             AATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTG                                                                  <  SRR4302540.3169991/94‑1 (MQ=60)

                             AATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTG                                                                  <  SRR4302540.4031684/94‑1 (MQ=60)

                             AATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTG                                                                  >  SRR4302540.1899211/1‑94 (MQ=60)

                              ATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGC                                                                 >  SRR4302540.4206312/1‑94 (MQ=60)

                              ATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGC                                                                 >  SRR4302540.6289042/1‑94 (MQ=60)

                                 GTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCA                                                              <  SRR4302540.5447153/94‑1 (MQ=60)

                                 GTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCA                                                              >  SRR4302540.5704013/1‑94 (MQ=60)

                                  TCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCGCTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAG                                                             <  SRR4302540.8449455/94‑1 (MQ=60)

                                  TCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAG                                                             <  SRR4302540.3106431/94‑1 (MQ=60)

                                  TCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAG                                                             <  SRR4302540.6424314/94‑1 (MQ=60)

                                  TCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCACAG                                                             <  SRR4302540.1693703/94‑1 (MQ=60)

                                   CAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGG                                                            <  SRR4302540.3630195/94‑1 (MQ=60)

                                   CAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGG                                                            <  SRR4302540.5954577/94‑1 (MQ=60)

                                   CAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGG                                                            <  SRR4302540.6592485/94‑1 (MQ=60)

                                   CAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGG                                                            <  SRR4302540.9912107/94‑1 (MQ=60)

                                   CAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGG                                                            >  SRR4302540.5104261/1‑94 (MQ=60)

                                    AGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGC                                                           >  SRR4302540.8912832/1‑94 (MQ=60)

                                    AGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGC                                                           >  SRR4302540.6219775/1‑94 (MQ=60)

                                    AGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGC                                                           >  SRR4302540.2479341/1‑94 (MQ=60)

                                       GCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACA                                                        >  SRR4302540.5156931/1‑94 (MQ=60)

                                       GCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACA                                                        <  SRR4302540.9946120/94‑1 (MQ=60)

                                       GCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACA                                                        >  SRR4302540.6525419/1‑94 (MQ=60)

                                       GCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACA                                                        >  SRR4302540.1117142/1‑94 (MQ=60)

                                       GCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACA                                                        >  SRR4302540.2182574/1‑94 (MQ=60)

                                       GCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACA                                                        >  SRR4302540.2182576/1‑94 (MQ=60)

                                       GCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCACACCATTTACTTTCACAACATTGCGCAGGCACA                                                        <  SRR4302540.4548833/94‑1 (MQ=60)

                                       GCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTCCAGCCAATTTACTTT‑ACAACATTtcgcaagccccg                                                       >  SRR4302540.7873752/1‑82 (MQ=60)

                                        CATTCGCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAG                                                       <  SRR4302540.8221580/94‑1 (MQ=60)

                                        CATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAG                                                       >  SRR4302540.380066/1‑94 (MQ=60)

                                        CATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAG                                                       >  SRR4302540.567058/1‑94 (MQ=60)

                                        CATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAG                                                       >  SRR4302540.728058/1‑94 (MQ=60)

                                        CATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAG                                                       <  SRR4302540.8221579/94‑1 (MQ=60)

                                         ATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGT                                                      >  SRR4302540.347301/1‑94 (MQ=60)

                                         ATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGT                                                      >  SRR4302540.5823495/1‑94 (MQ=60)

                                         ATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGT                                                      >  SRR4302540.5107037/1‑94 (MQ=60)

                                          TTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTG                                                     <  SRR4302540.2538740/94‑1 (MQ=60)

                                           TCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGT                                                    <  SRR4302540.6978147/94‑1 (MQ=60)

                                           TCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGC                                                    >  SRR4302540.2671684/1‑94 (MQ=60)

                                           TCCCTTGAGGCTTCACCACCAGCCACTGCTCACTTTCAGCCTGCGAACCGTCTTACAGACCATTTACATTCACAACATTGCGCAGGCAGAGTGT                                                    >  SRR4302540.4883804/1‑94 (MQ=60)

                                            CCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTC                                                   >  SRR4302540.3034449/1‑94 (MQ=60)

                                            CCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTC                                                   <  SRR4302540.1294089/94‑1 (MQ=60)

                                            CCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTC                                                   >  SRR4302540.1628136/1‑94 (MQ=60)

                                            CCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTC                                                   >  SRR4302540.6522665/1‑94 (MQ=60)

                                            CCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTC                                                   >  SRR4302540.6626941/1‑94 (MQ=60)

                                             CCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCC                                                  >  SRR4302540.5876721/1‑94 (MQ=60)

                                             CCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCC                                                  >  SRR4302540.3008150/1‑94 (MQ=60)

                                             CCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCC                                                  >  SRR4302540.6696977/1‑94 (MQ=60)

                                             CCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCC                                                  <  SRR4302540.6728645/94‑1 (MQ=60)

                                              CTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCA                                                 >  SRR4302540.173409/1‑94 (MQ=60)

                                              CTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCA                                                 >  SRR4302540.876871/1‑94 (MQ=60)

                                              CTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCA                                                 >  SRR4302540.8030727/1‑94 (MQ=60)

                                               TTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAG                                                <  SRR4302540.5475356/94‑1 (MQ=60)

                                               TTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAG                                                <  SRR4302540.6739457/94‑1 (MQ=60)

                                               TTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAG                                                <  SRR4302540.3760692/94‑1 (MQ=60)

                                                TGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGT                                               >  SRR4302540.4439449/1‑94 (MQ=60)

                                                TGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGT                                               >  SRR4302540.8119343/1‑94 (MQ=60)

                                                TGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGT                                               >  SRR4302540.9244493/1‑94 (MQ=60)

                                                TGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGT                                               >  SRR4302540.4901615/1‑94 (MQ=60)

                                                TGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGT                                               <  SRR4302540.4016003/94‑1 (MQ=60)

                                                 GAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTT                                              >  SRR4302540.5861379/1‑94 (MQ=60)

                                                  AGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTC                                             >  SRR4302540.8646028/1‑94 (MQ=60)

                                                  AGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTC                                             >  SRR4302540.9007729/1‑94 (MQ=60)

                                                  AGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTC                                             >  SRR4302540.7613867/1‑94 (MQ=60)

                                                   GGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCT                                            >  SRR4302540.8450529/1‑94 (MQ=60)

                                                    GCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTT                                           <  SRR4302540.6549956/94‑1 (MQ=60)

                                                     CTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTC                                          <  SRR4302540.7238527/94‑1 (MQ=60)

                                                     CTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTC                                          <  SRR4302540.8730197/94‑1 (MQ=60)

                                                     CTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTC                                          <  SRR4302540.5195492/94‑1 (MQ=60)

                                                     CTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTC                                          <  SRR4302540.6593062/94‑1 (MQ=60)

                                                     CTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTC                                          <  SRR4302540.8210488/94‑1 (MQ=60)

                                                      TTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCG                                         <  SRR4302540.4596987/94‑1 (MQ=60)

                                                       TCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGC                                        >  SRR4302540.3496761/1‑94 (MQ=60)

                                                       TCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGC                                        <  SRR4302540.1934678/94‑1 (MQ=60)

                                                        CACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCC                                       >  SRR4302540.7063645/1‑94 (MQ=60)

                                                         CCCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCT                                      <  SRR4302540.1991456/94‑1 (MQ=60)

                                                          CCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTC                                     <  SRR4302540.1276732/94‑1 (MQ=60)

                                                          CCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTC                                     <  SRR4302540.8382741/94‑1 (MQ=60)

                                                           CACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCG                                    <  SRR4302540.847183/94‑1 (MQ=60)

                                                           CACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCG                                    <  SRR4302540.6402095/94‑1 (MQ=60)

                                                           CACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCG                                    >  SRR4302540.777504/1‑94 (MQ=60)

                                                            ACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGC                                   >  SRR4302540.3958102/1‑94 (MQ=60)

                                                             CCAGCGCCTCCTCTCTTTCAGCCTGCTAACCGCCGTGCAGACCATTTACTTTCACAACATTGCGCAGGCCCAGGTTCCAGTTCTTCGCCTCGCC                                  <  SRR4302540.4514800/94‑1 (MQ=55)

                                                             CCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCC                                  >  SRR4302540.2953526/1‑94 (MQ=60)

                                                              CAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCC                                 >  SRR4302540.9065821/1‑94 (MQ=60)

                                                              CAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGACTCGCCC                                 <  SRR4302540.349755/94‑1 (MQ=60)

                                                               aggcccgtctccCTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCG                                <  SRR4302540.2983973/82‑1 (MQ=60)

                                                               AGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTTCAGTTCTTCGCCTCGCCCG                                >  SRR4302540.8542166/1‑94 (MQ=60)

                                                               AGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCG                                >  SRR4302540.7747162/1‑94 (MQ=60)

                                                                 CCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCA                              >  SRR4302540.7728013/1‑94 (MQ=60)

                                                                   CCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACC                            >  SRR4302540.8419798/1‑94 (MQ=60)

                                                                    CTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCA                           >  SRR4302540.6449024/1‑94 (MQ=60)

                                                                    CTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCA                           <  SRR4302540.2866796/94‑1 (MQ=60)

                                                                    CTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCA                           >  SRR4302540.2926898/1‑94 (MQ=60)

                                                                      GCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGT                         <  SRR4302540.6055750/94‑1 (MQ=60)

                                                                      GCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGT                         <  SRR4302540.6284972/94‑1 (MQ=60)

                                                                       CTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTC                        >  SRR4302540.6340266/1‑94 (MQ=60)

                                                                       CTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGGGTCCAGTTCTTCGCCTCGCCCGCACCAGTC                        >  SRR4302540.2956077/1‑94 (MQ=60)

                                                                        TCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCA                       >  SRR4302540.687893/1‑94 (MQ=60)

                                                                        TCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCA                       <  SRR4302540.4670303/94‑1 (MQ=60)

                                                                        TCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCA                       <  SRR4302540.8073521/94‑1 (MQ=60)

                                                                          ACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACA                     >  SRR4302540.8606002/1‑94 (MQ=60)

                                                                          ACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACA                     >  SRR4302540.7367256/1‑94 (MQ=60)

                                                                           CTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAG                    >  SRR4302540.4844611/1‑94 (MQ=60)

                                                                           CTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAG                    <  SRR4302540.10147326/94‑1 (MQ=60)

                                                                            TTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGT                   >  SRR4302540.5718190/1‑94 (MQ=60)

                                                                            TTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGT                   >  SRR4302540.10120608/1‑94 (MQ=60)

                                                                            CTTCAGCCTGCGAGCCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGT                   <  SRR4302540.3349990/94‑1 (MQ=60)

                                                                             TTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTA                  >  SRR4302540.1176933/1‑94 (MQ=60)

                                                                              TCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAA                 <  SRR4302540.4601797/94‑1 (MQ=60)

                                                                              TCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAA                 <  SRR4302540.1002499/94‑1 (MQ=60)

                                                                               CAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAAT                <  SRR4302540.6225378/94‑1 (MQ=60)

                                                                                AGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATC               <  SRR4302540.341671/94‑1 (MQ=60)

                                                                                AGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATC               <  SRR4302540.1051543/94‑1 (MQ=60)

                                                                                AGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATC               >  SRR4302540.2700146/1‑94 (MQ=60)

                                                                                  CCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGT             >  SRR4302540.4119597/1‑94 (MQ=60)

                                                                                  CCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGT             <  SRR4302540.5392502/94‑1 (MQ=60)

                                                                                  CCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGT             >  SRR4302540.4119599/1‑94 (MQ=60)

                                                                                   CTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTG            >  SRR4302540.5186708/1‑94 (MQ=60)

                                                                                     GCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTT          <  SRR4302540.7554279/94‑1 (MQ=60)

                                                                                     GCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTT          <  SRR4302540.7554278/94‑1 (MQ=60)

                                                                                     GCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTT          <  SRR4302540.4190095/94‑1 (MQ=60)

                                                                                     GCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTT          <  SRR4302540.2933054/94‑1 (MQ=60)

                                                                                     GCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTT          <  SRR4302540.4190092/94‑1 (MQ=60)

                                                                                     GCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTT          >  SRR4302540.5366902/1‑94 (MQ=60)

                                                                                     GCGAACCGCCTTGCAGACCATTTACTTCCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTT          <  SRR4302540.5378297/94‑1 (MQ=60)

                                                                                      CGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTG         >  SRR4302540.10133692/1‑94 (MQ=60)

                                                                                      CGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTG         <  SRR4302540.7824494/94‑1 (MQ=60)

                                                                                      CGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTG         >  SRR4302540.7145000/1‑94 (MQ=60)

                                                                                      CGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTG         >  SRR4302540.7308583/1‑94 (MQ=60)

                                                                                       GAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGC        >  SRR4302540.9784613/1‑94 (MQ=60)

                                                                                       GAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGC        >  SRR4302540.4762717/1‑94 (MQ=60)

                                                                                         ACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCA      <  SRR4302540.3183160/94‑1 (MQ=60)

                                                                                          CCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAG     <  SRR4302540.7570018/94‑1 (MQ=60)

                                                                                          CCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAG     <  SRR4302540.4509745/94‑1 (MQ=60)

                                                                                          CCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAG     >  SRR4302540.2243394/1‑94 (MQ=60)

                                                                                          CCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAG     >  SRR4302540.19994/1‑94 (MQ=60)

                                                                                          CCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAG     <  SRR4302540.4088309/94‑1 (MQ=60)

                                                                                           CGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGT    <  SRR4302540.5452913/94‑1 (MQ=60)

                                                                                           CGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGT    <  SRR4302540.2646890/94‑1 (MQ=60)

                                                                                           CGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGT    <  SRR4302540.6996989/94‑1 (MQ=60)

                                                                                            GCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTA   >  SRR4302540.7042522/1‑94 (MQ=60)

                                                                                             CCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTAC  <  SRR4302540.6709816/94‑1 (MQ=60)

                                                                                             CCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTAC  <  SRR4302540.437973/94‑1 (MQ=60)

                                                                                             CCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTAC  >  SRR4302540.9528886/1‑94 (MQ=60)

                                                                                             CCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTAC  >  SRR4302540.187611/1‑94 (MQ=60)

CCCGGCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCAGTAC  >  NC_000913/3829826‑3830012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`