Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,829,419 |
C→T |
R446C (CGC→TGC) |
yicH → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,829,419 | 0 | C | T | 99.6%
| 845.7
/ NA
| 231 | R446C (CGC→TGC) | yicH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (91/139); minor base G (0/1); total (91/140) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 251 total aligned reads displayed.
ACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAC > NC_000913/3829329‑3829507
|
aCGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGGCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGc > 1:4999324/1‑93 (MQ=255)
gCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGccc < 2:2260206/93‑1 (MQ=255)
gCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGccc < 2:5650899/93‑1 (MQ=255)
cTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGGCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCg > 1:1032180/1‑93 (MQ=255)
cTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCg < 2:4451641/93‑1 (MQ=255)
tGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTTGTTGCCCGt > 2:3479583/1‑93 (MQ=255)
ggTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTc > 1:5092041/1‑93 (MQ=255)
gTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCg < 2:3688459/93‑1 (MQ=255)
ttACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGc > 1:934832/1‑93 (MQ=255)
tACCGATCATAAATGGGGCGTGTGGAGTGGCTCCGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCt > 2:4006914/1‑93 (MQ=255)
ccGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTgg < 2:6236472/93‑1 (MQ=255)
ccGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTgg > 1:4934297/1‑93 (MQ=255)
gATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGgcg > 1:1473795/1‑93 (MQ=255)
gATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGgcg > 1:1390208/1‑93 (MQ=255)
aTCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGgcgc < 2:5773397/93‑1 (MQ=255)
tCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTTGTTGCCCGTGCCTGGCGCt > 2:5107555/1‑93 (MQ=255)
tCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCt < 2:2740713/93‑1 (MQ=255)
tAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAc < 2:873356/93‑1 (MQ=255)
tGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGcc < 1:852329/93‑1 (MQ=255)
gggCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTAAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCaa > 1:5680995/1‑93 (MQ=255)
gCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAAca < 1:5319073/93‑1 (MQ=255)
gCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAAca > 1:6084121/1‑93 (MQ=255)
gCGTCTGGAGTGGCTCGGCGAATCGGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAAca < 1:3732109/93‑1 (MQ=255)
cTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAAcagcag < 1:3902585/93‑1 (MQ=255)
cTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAAcagcag < 1:4045804/93‑1 (MQ=255)
tGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACagcagc < 2:5576336/93‑1 (MQ=255)
ggAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAgcagca < 1:1888804/93‑1 (MQ=255)
ggAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAgcagca > 1:3259667/1‑93 (MQ=255)
ggAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAgcagca < 1:2222351/93‑1 (MQ=255)
gAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGGAGCAc > 1:1251530/1‑93 (MQ=255)
gAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAc < 2:1703501/93‑1 (MQ=255)
gTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACgg < 1:3525840/93‑1 (MQ=255)
ggCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGCCCGCCAACAGCAGCACGGTg < 1:1190218/93‑1 (MQ=255)
cTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGaa < 2:2287305/93‑1 (MQ=255)
tCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAat > 1:5135839/1‑93 (MQ=255)
tCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAat > 1:1070373/1‑93 (MQ=255)
cGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAata < 2:2782689/93‑1 (MQ=255)
cGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAata < 1:654323/93‑1 (MQ=255)
gCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATc < 2:2073095/93‑1 (MQ=255)
gAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAg > 2:3559641/1‑93 (MQ=255)
gAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAg < 1:5734564/93‑1 (MQ=255)
aaacTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGc < 2:3910165/90‑1 (MQ=255)
aTCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCg < 2:5923486/93‑1 (MQ=255)
aTCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCg < 2:3777303/93‑1 (MQ=255)
tCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGa > 1:4229134/1‑93 (MQ=255)
tCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGa > 2:5253342/1‑93 (MQ=255)
tCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGa > 1:6239199/1‑93 (MQ=255)
tCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGa > 1:4391275/1‑93 (MQ=255)
cTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGaa < 2:4704663/93‑1 (MQ=255)
tGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAc < 1:2838661/93‑1 (MQ=255)
tGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAc < 2:4333738/93‑1 (MQ=255)
gAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACt > 1:5584203/1‑93 (MQ=255)
aaTGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTg < 1:3047204/93‑1 (MQ=255)
aTGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGa < 2:263074/93‑1 (MQ=255)
tGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAg < 2:788908/93‑1 (MQ=255)
tGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAg > 2:5393461/1‑93 (MQ=255)
gccgccgccGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGt < 1:1527937/93‑1 (MQ=255)
gccgccgccGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGt > 2:1869764/1‑93 (MQ=255)
ccgccgccgCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTg > 2:4822059/1‑93 (MQ=255)
gccgcGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAttt > 2:1010854/1‑93 (MQ=255)
gccgcGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAttt > 2:4713974/1‑93 (MQ=255)
gccgcGACATTCAAGCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCAttt > 2:3850686/1‑93 (MQ=255)
gcgACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACt > 1:409584/1‑93 (MQ=255)
gcgACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACt > 2:744698/1‑93 (MQ=255)
gcgACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACt > 2:296035/1‑93 (MQ=255)
gcgACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACt > 2:1421020/1‑93 (MQ=255)
gcgACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACt > 1:1686504/1‑93 (MQ=255)
cgACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTg < 2:3058702/93‑1 (MQ=255)
cgACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTg < 1:1962615/93‑1 (MQ=255)
gACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGACAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGa > 2:1724408/1‑93 (MQ=255)
aTTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGaaaa > 1:4477457/1‑93 (MQ=255)
aTTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGGGAATATCAGCGAACTGAGTGCATTTACTGaaga > 2:1120659/1‑91 (MQ=255)
ttCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGaaaag > 1:2585229/1‑92 (MQ=255)
ttCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGaaaaa < 2:2155411/93‑1 (MQ=255)
ttCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGaaaaa < 1:2661116/93‑1 (MQ=255)
ttCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGaaaaa < 2:4950418/93‑1 (MQ=255)
cAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAgg < 2:6207084/93‑1 (MQ=255)
cAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAgg < 2:2401155/93‑1 (MQ=255)
cAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGCTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAgg > 2:3284303/1‑93 (MQ=255)
aaTCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGc < 1:47541/93‑1 (MQ=255)
aaTCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGc < 1:4819526/93‑1 (MQ=255)
aTCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCa < 2:1588274/93‑1 (MQ=255)
aTCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCa < 2:2490535/93‑1 (MQ=255)
tCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCAt < 1:2000109/93‑1 (MQ=255)
gtgtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTc > 2:5339694/1‑93 (MQ=255)
gtgtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTc < 1:3176836/93‑1 (MQ=255)
tgtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCt < 1:3695910/93‑1 (MQ=255)
tgtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCt < 1:265043/93‑1 (MQ=255)
tgtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCt < 2:479328/93‑1 (MQ=255)
gtTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTg < 1:527953/93‑1 (MQ=255)
ttGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTgg < 1:1743519/93‑1 (MQ=255)
tGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGa < 1:2123223/93‑1 (MQ=255)
tGATCTTCGGTGCCCGTCGCCGGCGCTGACCGCCACCAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACAGAAAAAGGCATTCTGGa > 2:544007/1‑93 (MQ=255)
gATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGaa < 2:5002629/93‑1 (MQ=255)
gATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGaa < 2:6061940/93‑1 (MQ=255)
tGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGc < 2:3108333/93‑1 (MQ=255)
tGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGc < 1:2454071/93‑1 (MQ=255)
gTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGcc > 2:1757128/1‑93 (MQ=255)
gTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGcc < 2:1616404/93‑1 (MQ=255)
gTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGcc < 1:4236260/93‑1 (MQ=255)
|
ACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAC > NC_000913/3829329‑3829507
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCA > NC_000913/3829327‑3829512
|
TGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCTGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTG > SRR4302533.4469009/1‑94 (MQ=60)
TGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTG < SRR4302533.1745013/94‑1 (MQ=60)
TGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTG < SRR4302533.1288529/94‑1 (MQ=60)
GACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGGCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGC > SRR4302533.5029628/1‑94 (MQ=60)
ACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTTGTTGCC > SRR4302533.4180207/1‑94 (MQ=60)
ACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCC > SRR4302533.108495/1‑94 (MQ=60)
GCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGGCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCG > SRR4302533.1038250/1‑94 (MQ=60)
CTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGT < SRR4302533.4064388/94‑1 (MQ=60)
TGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTC > SRR4302533.5122802/1‑94 (MQ=60)
GGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCG > SRR4302533.1760134/1‑94 (MQ=60)
GTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGC > SRR4302533.940321/1‑94 (MQ=60)
GTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGC > SRR4302533.5804354/1‑94 (MQ=60)
TACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTG < SRR4302533.1449833/94‑1 (MQ=60)
ACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGG > SRR4302533.4964175/1‑94 (MQ=60)
ACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGG > SRR4302533.309396/1‑94 (MQ=60)
ACCGATCATAAATGGGGCGTCNGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGG < SRR4302533.2668938/94‑1 (MQ=60)
CCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGGCGCCGCCGCGACATTCAATCGCGGTGATGTTCGTTGCCCGTCGCTGGC > SRR4302533.4421754/1‑94 (MQ=60)
CGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGGATGCCGCCGCCGCGAGATTCAATCGTGTTGGTGTTCGTTGCCCGccgctaggg > SRR4302533.4846236/1‑85 (MQ=60)
CGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCG > SRR4302533.703227/1‑94 (MQ=60)
CGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCG > SRR4302533.1482701/1‑94 (MQ=60)
CGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCG > SRR4302533.1398582/1‑94 (MQ=60)
ATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCT > SRR4302533.2339578/1‑94 (MQ=60)
ATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCT < SRR4302533.2083676/94‑1 (MQ=60)
CATAAATGGGGCGTCTGGAGTGGCTCGGCGAATGTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTGGCCCGTCGCTGGCGCTGA < SRR4302533.2199585/94‑1 (MQ=60)
ATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAC > SRR4302533.2612297/1‑94 (MQ=60)
ATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGAC > SRR4302533.4674336/1‑94 (MQ=60)
TAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACC < SRR4302533.5128613/94‑1 (MQ=60)
AAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCG < SRR4302533.1634375/94‑1 (MQ=60)
AATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGC > SRR4302533.1503575/1‑94 (MQ=60)
ATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCC > SRR4302533.4428758/1‑94 (MQ=60)
TGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCA < SRR4302533.430970/94‑1 (MQ=60)
TGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCA < SRR4302533.857318/94‑1 (MQ=60)
GGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTAAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAA > SRR4302533.5715308/1‑94 (MQ=60)
GGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACA > SRR4302533.6120906/1‑94 (MQ=60)
GCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAG < SRR4302533.5350950/94‑1 (MQ=60)
GCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAG < SRR4302533.1260007/94‑1 (MQ=60)
GCGTCTGGAGTGGCTCGGCGAATCGGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAG < SRR4302533.3755004/94‑1 (MQ=60)
GTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCA < SRR4302533.489607/94‑1 (MQ=60)
TCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAG < SRR4302533.3607626/94‑1 (MQ=60)
CTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGC < SRR4302533.520227/94‑1 (MQ=60)
CTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGC < SRR4302533.4070426/94‑1 (MQ=60)
CTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGC < SRR4302533.3926418/94‑1 (MQ=60)
TGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCA > SRR4302533.3279775/1‑94 (MQ=60)
GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGGAGCAC > SRR4302533.1259008/1‑94 (MQ=60)
GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAC < SRR4302533.1900342/94‑1 (MQ=60)
GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAC < SRR4302533.2236079/94‑1 (MQ=60)
GGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCAC < SRR4302533.1075761/94‑1 (MQ=60)
AGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCCGCACGG > SRR4302533.5416144/1‑94 (MQ=60)
GTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGT < SRR4302533.3547566/94‑1 (MQ=60)
GTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGT > SRR4302533.5315655/1‑94 (MQ=60)
GGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGCCCGCCAACAGCAGCACGGTGA < SRR4302533.1197370/94‑1 (MQ=60)
GCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAA < SRR4302533.4028093/94‑1 (MQ=60)
GCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAA > SRR4302533.1215758/1‑94 (MQ=60)
CTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAAT > SRR4302533.5166871/1‑94 (MQ=60)
CTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAAT > SRR4302533.1076680/1‑94 (MQ=60)
TCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATA < SRR4302533.5718674/94‑1 (MQ=60)
CGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATAT < SRR4302533.658184/94‑1 (MQ=60)
GCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCA < SRR4302533.1147172/94‑1 (MQ=60)
CGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG < SRR4302533.4731983/94‑1 (MQ=60)
CGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG < SRR4302533.6328926/94‑1 (MQ=60)
CGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG < SRR4302533.960000/94‑1 (MQ=60)
CGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAG > SRR4302533.2292728/1‑94 (MQ=60)
GAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGC < SRR4302533.5769182/94‑1 (MQ=60)
ATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGA > SRR4302533.6276561/1‑94 (MQ=60)
ATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGA > SRR4302533.3719531/1‑94 (MQ=60)
ATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGA < SRR4302533.621235/94‑1 (MQ=60)
ATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGA > SRR4302533.4417784/1‑94 (MQ=60)
ATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGA > SRR4302533.4254702/1‑94 (MQ=60)
CTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAAC < SRR4302533.5014850/94‑1 (MQ=60)
TGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACT > SRR4302533.5617943/1‑94 (MQ=60)
TGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACT < SRR4302533.2856129/94‑1 (MQ=60)
AATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGA < SRR4302533.3065860/94‑1 (MQ=60)
TGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT < SRR4302533.744312/94‑1 (MQ=60)
TGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGT < SRR4302533.1749377/94‑1 (MQ=60)
GCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTG > SRR4302533.2419452/1‑94 (MQ=60)
GCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTG < SRR4302533.391158/94‑1 (MQ=60)
GCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTG < SRR4302533.1537130/94‑1 (MQ=60)
CGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTT < SRR4302533.5547326/94‑1 (MQ=60)
CGCCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTT < SRR4302533.1989131/94‑1 (MQ=60)
CCGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGGGAATATCAGCGAACTGAGTGCATTTAC > SRR4302533.435709/1‑94 (MQ=60)
CGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACT > SRR4302533.412041/1‑94 (MQ=60)
CGCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACT > SRR4302533.1696719/1‑94 (MQ=60)
GCGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTG > SRR4302533.2935384/1‑94 (MQ=60)
CGAGATTCAATCGTTTTGATGTTCGTTTCCCGTCGCTTGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGA < SRR4302533.1974593/94‑1 (MQ=60)
CGACATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGA < SRR4302533.1974594/94‑1 (MQ=60)
CATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAA < SRR4302533.2757211/94‑1 (MQ=60)
CATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAA > SRR4302533.4504542/1‑94 (MQ=60)
CATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAA > SRR4302533.3726879/1‑94 (MQ=60)
CATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAA > SRR4302533.1730013/1‑94 (MQ=60)
CATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGAGCATTTACTGAAAA > SRR4302533.4073457/1‑94 (MQ=60)
ATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAG > SRR4302533.2601124/1‑94 (MQ=60)
ATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAA > SRR4302533.1920497/1‑94 (MQ=60)
ATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAA > SRR4302533.2499431/1‑94 (MQ=60)
ATTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAA > SRR4302533.3087020/1‑94 (MQ=60)
TTCAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAG < SRR4302533.2677455/94‑1 (MQ=60)
CAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGC < SRR4302533.3200606/94‑1 (MQ=60)
CAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGC > SRR4302533.5206972/1‑94 (MQ=60)
CAATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGC < SRR4302533.885745/94‑1 (MQ=60)
AATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCA < SRR4302533.4848733/94‑1 (MQ=60)
AATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCA < SRR4302533.47871/94‑1 (MQ=60)
ATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCAT < SRR4302533.6150526/94‑1 (MQ=60)
ATCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCAT < SRR4302533.1488728/94‑1 (MQ=60)
TCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATT < SRR4302533.2650379/94‑1 (MQ=60)
TCGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATT < SRR4302533.2012421/94‑1 (MQ=60)
CGTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTC < SRR4302533.5040636/94‑1 (MQ=60)
GTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCT < SRR4302533.2778936/94‑1 (MQ=60)
GTGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCT < SRR4302533.3196375/94‑1 (MQ=60)
TGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTG < SRR4302533.3718613/94‑1 (MQ=60)
TGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTG > SRR4302533.5032952/1‑94 (MQ=60)
TGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTG < SRR4302533.266655/94‑1 (MQ=60)
TGTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTG > SRR4302533.3432810/1‑94 (MQ=60)
GTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGG < SRR4302533.531094/94‑1 (MQ=60)
GTTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGG < SRR4302533.4909727/94‑1 (MQ=60)
TTGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGA < SRR4302533.1754119/94‑1 (MQ=60)
TGATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAA < SRR4302533.2136311/94‑1 (MQ=60)
GATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAG < SRR4302533.4259442/94‑1 (MQ=60)
GATGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAG < SRR4302533.4165256/94‑1 (MQ=60)
TGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCC < SRR4302533.2469215/94‑1 (MQ=60)
TGTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCC > SRR4302533.4810045/1‑94 (MQ=60)
GTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCA > SRR4302533.5705896/1‑94 (MQ=60)
GTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCA < SRR4302533.4261850/94‑1 (MQ=60)
GTTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCA > SRR4302533.3477315/1‑94 (MQ=60)
TTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCAC < SRR4302533.5718997/94‑1 (MQ=60)
TTCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGCGCATTTACTGAAAAAGGCATTCTGGAAGCCAC > SRR4302533.2065713/1‑94 (MQ=60)
TCGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACC < SRR4302533.1295516/94‑1 (MQ=60)
CGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCG > SRR4302533.5749145/1‑94 (MQ=60)
CGTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCG > SRR4302533.2039362/1‑94 (MQ=60)
GTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGC < SRR4302533.5425079/94‑1 (MQ=60)
GTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGC > SRR4302533.512454/1‑94 (MQ=60)
GTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGC > SRR4302533.5032274/1‑94 (MQ=60)
GTTGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGC > SRR4302533.2879416/1‑94 (MQ=60)
TGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCA > SRR4302533.5669428/1‑94 (MQ=60)
TGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCA > SRR4302533.3815054/1‑94 (MQ=60)
|
TGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCA > NC_000913/3829327‑3829512
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
