Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,851,411	A→G	intergenic (‑796/‑132)	ivbL ← / → emrD	ilvB operon leader peptide/2‑module integral membrane pump

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,851,411	0	A	G	99.7%	2064.6 / ‑4.3	626	intergenic (‑796/‑132)	ivbL/emrD	ilvB operon leader peptide/2‑module integral membrane pump
Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (305/318); total (306/320)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.23e-01

Only 100 of 647 total aligned reads displayed.

TTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGG  >  NC_000913/3851321‑3851500

tttAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCa                                                                                         <  2:3303394/93‑1 (MQ=255)

tttAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCa                                                                                         >  1:2312782/1‑93 (MQ=255)

 ttAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCat                                                                                        <  1:3362416/93‑1 (MQ=255)

  tAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCata                                                                                       <  2:8433307/93‑1 (MQ=255)

  tAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCata                                                                                       <  1:7985946/93‑1 (MQ=255)

  tAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCata                                                                                       <  2:1745464/93‑1 (MQ=255)

     cGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTc                                                                                    <  1:3745227/93‑1 (MQ=255)

      gTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCt                                                                                   <  1:9148459/93‑1 (MQ=255)

      gTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTGTTGTTTGCATATTCt                                                                                   >  1:8673319/1‑93 (MQ=255)

        gCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGc                                                                                 <  1:469699/93‑1 (MQ=255)

        gCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGc                                                                                 >  1:4345759/1‑93 (MQ=255)

         cGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGcc                                                                                <  2:6046771/93‑1 (MQ=255)

          gggTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCg                                                                               >  2:3168359/1‑93 (MQ=255)

           ggTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGc                                                                              >  2:3487714/1‑93 (MQ=255)

           ggTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGc                                                                              >  1:9742048/1‑93 (MQ=255)

             ttGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTa                                                                            >  2:7318307/1‑93 (MQ=255)

               ggTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTaaa                                                                          >  1:7585636/1‑93 (MQ=255)

               ggTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTaaa                                                                          >  1:1866542/1‑93 (MQ=255)

                gtgtCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAAc                                                                         >  2:5297331/1‑93 (MQ=255)

                gtgtCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAAc                                                                         <  1:3993371/93‑1 (MQ=255)

                gtgtCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAAc                                                                         >  2:5691854/1‑93 (MQ=255)

                  gtCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACaa                                                                       <  1:4162821/93‑1 (MQ=255)

                   tCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAAt                                                                      >  1:6826683/1‑93 (MQ=255)

                      gatgcgatgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTcc                                                                   <  2:7025381/93‑1 (MQ=255)

                      gatgcgatgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTcc                                                                   >  1:9457111/1‑93 (MQ=255)

                       atgcgatgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTccc                                                                  <  1:7077668/93‑1 (MQ=255)

                         gcgatgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCa                                                                >  2:151673/1‑93 (MQ=255)

                            atgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTc                                                             >  2:2707523/1‑93 (MQ=255)

                            atgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTc                                                             <  2:2831277/93‑1 (MQ=255)

                             tgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTcc                                                            >  1:5372526/1‑93 (MQ=255)

                             tgcTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTcc                                                            >  2:9436170/1‑93 (MQ=255)

                                tGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTgg                                                         <  1:1527337/93‑1 (MQ=255)

                                 gACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCTGCTAAACAATTCCCCATTCCTGGc                                                        >  2:2070236/1‑93 (MQ=255)

                                 gACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGc                                                        >  2:1142073/1‑93 (MQ=255)

                                 gACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGc                                                        <  1:72416/93‑1 (MQ=255)

                                 gACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGc                                                        <  1:2652876/93‑1 (MQ=255)

                                   cGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGt                                                      <  2:6901161/93‑1 (MQ=255)

                                    gCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGta                                                     <  2:6454366/93‑1 (MQ=255)

                                    gCATCTTACCCGCCCTCCCATCTCCCCCGGCAACATTTATTGCCGCTTTTGTTAGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGta                                                     <  2:7711334/93‑1 (MQ=255)

                                      aTCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGtata                                                   <  1:5965638/93‑1 (MQ=255)

                                         ttATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCt                                                <  1:10001974/93‑1 (MQ=255)

                                          tATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTg                                               <  2:8013985/93‑1 (MQ=255)

                                          tATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTg                                               >  2:1575536/1‑93 (MQ=255)

                                           aTCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTgg                                              <  2:5846387/93‑1 (MQ=255)

                                            tCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGc                                             <  2:6249854/93‑1 (MQ=255)

                                            tCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGc                                             >  1:333358/1‑93 (MQ=255)

                                            tCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGc                                             <  1:7505143/93‑1 (MQ=255)

                                            tCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGc                                             <  2:5034362/93‑1 (MQ=255)

                                             ccGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCt                                            <  2:8995181/93‑1 (MQ=255)

                                               gCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTaa                                          >  2:7126422/1‑93 (MQ=255)

                                               gCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTaa                                          <  2:3960377/93‑1 (MQ=255)

                                                cccTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCTGCTAAACAATTCCCCATTCCTGGCGTATATCTCGCTAAc                                         >  2:7452899/1‑93 (MQ=255)

                                                cccTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAAc                                         >  2:2321714/1‑93 (MQ=255)

                                                 ccTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACa                                        <  2:7834062/93‑1 (MQ=255)

                                                  cTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACAt                                       <  2:4139037/93‑1 (MQ=255)

                                                   caCCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACAtt                                      <  1:1427311/92‑1 (MQ=255)

                                                    aCCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtc                                     <  2:6659006/93‑1 (MQ=255)

                                                    aCCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtc                                     >  1:8574883/1‑93 (MQ=255)

                                                     ccATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtca                                    <  1:5697856/93‑1 (MQ=255)

                                                       aTCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtcatc                                  >  1:9594564/1‑93 (MQ=255)

                                                        tctctcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtcatca                                 >  1:5505187/1‑93 (MQ=255)

                                                        tctctcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtcatca                                 <  1:9361392/93‑1 (MQ=255)

                                                        tctctcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATtcatca                                 >  2:5454712/1‑93 (MQ=255)

                                                         ctctcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCaa                                <  2:1885195/93‑1 (MQ=255)

                                                          tctcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAt                               >  1:4938524/1‑93 (MQ=255)

                                                           ctcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAtg                              <  1:6109679/93‑1 (MQ=255)

                                                           ctcCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAtg                              <  1:3238222/93‑1 (MQ=255)

                                                              ccGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGa                           <  1:280445/93‑1 (MQ=255)

                                                               cGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGAt                          <  2:2450745/93‑1 (MQ=255)

                                                                ggCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATa                         >  1:9010633/1‑93 (MQ=255)

                                                                ggCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATa                         >  1:7816242/1‑93 (MQ=255)

                                                                 gCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAg                        <  1:5054879/93‑1 (MQ=255)

                                                                  cAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGa                       >  1:1677117/1‑93 (MQ=255)

                                                                   aaCATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAt                      >  2:4299224/1‑93 (MQ=255)

                                                                   aaCATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAt                      <  2:8669188/93‑1 (MQ=255)

                                                                    aCATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAtt                     >  1:3159078/1‑93 (MQ=255)

                                                                    aCATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAtt                     <  1:8736007/93‑1 (MQ=255)

                                                                     cATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTc                    >  2:4520765/1‑93 (MQ=255)

                                                                     cATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTc                    <  2:4806794/93‑1 (MQ=255)

                                                                     cATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTc                    <  2:8244483/93‑1 (MQ=255)

                                                                      aTTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTcc                   >  2:3670563/1‑93 (MQ=255)

                                                                       tttATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCct                  >  1:6637840/1‑93 (MQ=255)

                                                                        ttATTTGCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCctc                 <  1:4553134/93‑1 (MQ=255)

                                                                        ttATTGCCGCTTTTGTTTGCTTATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGCTTtctc                 >  1:8897381/1‑93 (MQ=255)

                                                                        ttATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCctc                 <  2:8229333/93‑1 (MQ=255)

                                                                         tATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCctct                <  1:6306945/93‑1 (MQ=255)

                                                                          aTTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCtctc               >  1:8104702/1‑93 (MQ=255)

                                                                          aTTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCtctc               >  1:2131884/1‑93 (MQ=255)

                                                                          aTTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCtctc               >  1:3517881/1‑93 (MQ=255)

                                                                          aTTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCtctc               <  1:6420545/93‑1 (MQ=255)

                                                                           ttGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTcc              <  2:6770641/93‑1 (MQ=255)

                                                                              ccGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGc           >  1:9949370/1‑93 (MQ=255)

                                                                                  ttttGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCAttt       >  1:2534655/1‑93 (MQ=255)

                                                                                   tttgtttgCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTa      <  1:2968682/93‑1 (MQ=255)

                                                                                   tttgtttgCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTa      <  1:8289393/93‑1 (MQ=255)

                                                                                    ttGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTAt     >  2:9778847/1‑93 (MQ=255)

                                                                                     tGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATg    >  2:9121489/1‑93 (MQ=255)

                                                                                     tGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATg    <  1:1150215/93‑1 (MQ=255)

                                                                                     tGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATg    >  1:1039213/1‑93 (MQ=255)

                                                                                      gTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATgg   >  2:2898686/1‑93 (MQ=255)

TTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGG  >  NC_000913/3851321‑3851500

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 374 total aligned reads displayed.

ATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATG  >  NC_000913/3851318‑3851504

ATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTG                                                                                               <  SRR4302540.3701107/94‑1 (MQ=60)

ATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTG                                                                                               >  SRR4302540.3732418/1‑94 (MQ=60)

 TATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGC                                                                                              <  SRR4302540.6258609/94‑1 (MQ=60)

 TATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGC                                                                                              >  SRR4302540.9781980/1‑94 (MQ=60)

  ATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCA                                                                                             >  SRR4302540.2337677/1‑94 (MQ=60)

  ATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCA                                                                                             >  SRR4302540.1719843/1‑94 (MQ=60)

     TAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATAT                                                                                          <  SRR4302540.255702/94‑1 (MQ=60)

     TAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATAT                                                                                          <  SRR4302540.8078940/94‑1 (MQ=60)

     TAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATAT                                                                                          <  SRR4302540.7310001/94‑1 (MQ=60)

     TAGCGTGCGGGTGGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATAT                                                                                          <  SRR4302540.6990585/94‑1 (MQ=60)

      AGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATT                                                                                         <  SRR4302540.207724/94‑1 (MQ=60)

       GCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTC                                                                                        <  SRR4302540.6741441/94‑1 (MQ=60)

        GGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCT                                                                                       <  SRR4302540.10007541/94‑1 (MQ=60)

        CGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCT                                                                                       <  SRR4302540.9492816/94‑1 (MQ=60)

        CGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCT                                                                                       <  SRR4302540.879656/94‑1 (MQ=60)

        CGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTGTTGTTTGCATATTCT                                                                                       >  SRR4302540.8774065/1‑94 (MQ=60)

         GTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTG                                                                                      <  SRR4302540.7605509/94‑1 (MQ=60)

         GTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTG                                                                                      <  SRR4302540.7797128/94‑1 (MQ=60)

         GTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTG                                                                                      <  SRR4302540.6038677/94‑1 (MQ=60)

         GTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTG                                                                                      >  SRR4302540.3743046/1‑94 (MQ=60)

         GTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTG                                                                                      <  SRR4302540.3047061/94‑1 (MQ=60)

            CGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCG                                                                                   >  SRR4302540.8219004/1‑94 (MQ=60)

            CGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCG                                                                                   <  SRR4302540.8918219/94‑1 (MQ=60)

            CGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCG                                                                                   <  SRR4302540.2453122/94‑1 (MQ=60)

            CGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCG                                                                                   <  SRR4302540.3345690/94‑1 (MQ=60)

             GGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGC                                                                                  >  SRR4302540.9856395/1‑94 (MQ=60)

             GGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGC                                                                                  >  SRR4302540.10022032/1‑94 (MQ=60)

              GGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCT                                                                                 >  SRR4302540.9701414/1‑94 (MQ=60)

               GTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTA                                                                                >  SRR4302540.2114181/1‑94 (MQ=60)

                 ttgtggctggTGCGATGCTTACCCATTTTATCCGGCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAA                                                                              <  SRR4302540.3274993/84‑1 (MQ=60)

                 TGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAA                                                                              >  SRR4302540.1886996/1‑94 (MQ=60)

                 TGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAA                                                                              >  SRR4302540.7670815/1‑94 (MQ=60)

                 TGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAA                                                                              >  SRR4302540.7670816/1‑94 (MQ=60)

                 TGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAA                                                                              >  SRR4302540.8528154/1‑94 (MQ=60)

                  GGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAAC                                                                             <  SRR4302540.8430225/94‑1 (MQ=60)

                   GTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACA                                                                            <  SRR4302540.6790894/94‑1 (MQ=60)

                    TGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAA                                                                           >  SRR4302540.6894106/1‑94 (MQ=60)

                     GTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAAT                                                                          <  SRR4302540.4207946/94‑1 (MQ=60)

                     GTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAAT                                                                          <  SRR4302540.3991771/94‑1 (MQ=60)

                       CGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTC                                                                        <  SRR4302540.4466316/94‑1 (MQ=60)

                       CGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTC                                                                        >  SRR4302540.1191409/1‑94 (MQ=60)

                       CGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTC                                                                        <  SRR4302540.9199902/94‑1 (MQ=60)

                       CGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTC                                                                        <  SRR4302540.1009409/94‑1 (MQ=60)

                        GGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCC                                                                       >  SRR4302540.4108486/1‑94 (MQ=60)

                        GGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCC                                                                       >  SRR4302540.9569336/1‑94 (MQ=60)

                        GGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCC                                                                       <  SRR4302540.3466114/94‑1 (MQ=60)

                         GATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCC                                                                      >  SRR4302540.5160561/1‑94 (MQ=60)

                         GATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCC                                                                      <  SRR4302540.8163982/94‑1 (MQ=60)

                          ATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTATTGTTTGCATATTCTGCCGCTAAACAATTCTCC                                                                     >  SRR4302540.9811128/1‑94 (MQ=60)

                           TGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCA                                                                    <  SRR4302540.9925525/94‑1 (MQ=60)

                            GCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCAT                                                                   <  SRR4302540.4391240/94‑1 (MQ=60)

                            GCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCAT                                                                   <  SRR4302540.2888105/94‑1 (MQ=60)

                             CGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATT                                                                  <  SRR4302540.804936/94‑1 (MQ=60)

                             CGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATT                                                                  <  SRR4302540.9231651/94‑1 (MQ=60)

                             CGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATT                                                                  >  SRR4302540.2186029/1‑94 (MQ=60)

                             CGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATT                                                                  <  SRR4302540.7187645/94‑1 (MQ=60)

                              GATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAATAATTTCCCATTC                                                                 >  SRR4302540.8774328/1‑94 (MQ=60)

                              GATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTC                                                                 >  SRR4302540.8774329/1‑94 (MQ=60)

                               ATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCC                                                                >  SRR4302540.5431586/1‑94 (MQ=60)

                               ATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCC                                                                <  SRR4302540.4826630/94‑1 (MQ=60)

                               ATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCC                                                                >  SRR4302540.2967508/1‑94 (MQ=60)

                                  CTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGG                                                             >  SRR4302540.9405586/1‑94 (MQ=60)

                                   TGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGC                                                            >  SRR4302540.6298149/1‑94 (MQ=60)

                                   TGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGC                                                            <  SRR4302540.1544252/94‑1 (MQ=60)

                                   TGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGC                                                            <  SRR4302540.7322613/94‑1 (MQ=60)

                                   TGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGC                                                            >  SRR4302540.2608563/1‑94 (MQ=60)

                                   TGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGC                                                            >  SRR4302540.2011614/1‑94 (MQ=60)

                                    GACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCG                                                           <  SRR4302540.6381371/94‑1 (MQ=60)

                                    GACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCG                                                           <  SRR4302540.2681657/94‑1 (MQ=60)

                                     ACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGT                                                          >  SRR4302540.5252822/1‑94 (MQ=60)

                                     ACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGT                                                          <  SRR4302540.8628298/94‑1 (MQ=60)

                                     ACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGT                                                          >  SRR4302540.71321/1‑94 (MQ=60)

                                      CGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTA                                                         <  SRR4302540.4768076/94‑1 (MQ=60)

                                      CGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTA                                                         <  SRR4302540.8120582/94‑1 (MQ=60)

                                       GCATCTTCTCCGCCCTACACTCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAACCAATTCCCCATTCCTGGCGTCT                                                        <  SRR4302540.9095578/94‑1 (MQ=60)

                                       GCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTAT                                                        <  SRR4302540.7328558/94‑1 (MQ=60)

                                         ATCTTATCCGCCCTACCATCTCTCCCGGCAACCTTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATAT                                                      >  SRR4302540.7395855/1‑94 (MQ=60)

                                         ATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATAT                                                      <  SRR4302540.8228575/94‑1 (MQ=60)

                                         ATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATAT                                                      <  SRR4302540.6031645/94‑1 (MQ=60)

                                          TCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATC                                                     <  SRR4302540.9715594/94‑1 (MQ=60)

                                          TCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTAGCGTATATC                                                     >  SRR4302540.891833/1‑94 (MQ=60)

                                           CTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCT                                                    >  SRR4302540.5524355/1‑94 (MQ=60)

                                           CTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCT                                                    <  SRR4302540.552131/94‑1 (MQ=60)

                                           CTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCT                                                    >  SRR4302540.7906632/1‑94 (MQ=60)

                                           CTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCT                                                    <  SRR4302540.3889968/94‑1 (MQ=60)

                                           CTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCT                                                    <  SRR4302540.9558528/94‑1 (MQ=60)

                                            TTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTG                                                   >  SRR4302540.6232857/1‑94 (MQ=60)

                                            TTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTG                                                   <  SRR4302540.4234701/94‑1 (MQ=60)

                                            TTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTG                                                   <  SRR4302540.4048484/94‑1 (MQ=60)

                                            TTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTG                                                   <  SRR4302540.9536691/94‑1 (MQ=60)

                                            TTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTG                                                   <  SRR4302540.5968092/94‑1 (MQ=60)

                                             TATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGG                                                  <  SRR4302540.9015096/94‑1 (MQ=60)

                                             TATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGG                                                  >  SRR4302540.10113900/1‑94 (MQ=60)

                                             TATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGG                                                  <  SRR4302540.3014713/94‑1 (MQ=60)

                                              ATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGC                                                 <  SRR4302540.3814334/94‑1 (MQ=60)

                                                CCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTA                                               >  SRR4302540.1079796/1‑94 (MQ=60)

                                                   CCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACA                                            >  SRR4302540.9363022/1‑94 (MQ=60)

                                                    CCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACAT                                           >  SRR4302540.4279155/1‑94 (MQ=60)

                                                    CCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACAT                                           >  SRR4302540.1681302/1‑94 (MQ=60)

                                                    CCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACAT                                           <  SRR4302540.5903849/94‑1 (MQ=60)

                                                     CTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATT                                          >  SRR4302540.7986187/1‑94 (MQ=60)

                                                     CTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATT                                          >  SRR4302540.4660645/1‑94 (MQ=60)

                                                     CTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATT                                          >  SRR4302540.9770714/1‑94 (MQ=60)

                                                     CTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATT                                          >  SRR4302540.7861240/1‑94 (MQ=60)

                                                      TACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTC                                         >  SRR4302540.505247/1‑94 (MQ=60)

                                                      TACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTC                                         <  SRR4302540.1442765/94‑1 (MQ=60)

                                                      TACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTC                                         >  SRR4302540.3381501/1‑94 (MQ=60)

                                                      TACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTC                                         >  SRR4302540.8674517/1‑94 (MQ=60)

                                                       ACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCA                                        <  SRR4302540.5042593/94‑1 (MQ=60)

                                                        CCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCAT                                       <  SRR4302540.6483758/94‑1 (MQ=60)

                                                        CCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCAT                                       <  SRR4302540.5760587/94‑1 (MQ=60)

                                                        CCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCAT                                       >  SRR4302540.9627031/1‑94 (MQ=60)

                                                         CATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATC                                      >  SRR4302540.1462101/1‑94 (MQ=60)

                                                         CATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATC                                      >  SRR4302540.1800959/1‑94 (MQ=60)

                                                          ATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCA                                     >  SRR4302540.3209831/1‑94 (MQ=60)

                                                          ATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCA                                     >  SRR4302540.1331881/1‑94 (MQ=60)

                                                          ATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCA                                     <  SRR4302540.3399055/94‑1 (MQ=60)

                                                          ATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCA                                     >  SRR4302540.5565815/1‑94 (MQ=60)

                                                          ATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCA                                     >  SRR4302540.3263131/1‑94 (MQ=60)

                                                          ATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCA                                     >  SRR4302540.2646415/1‑94 (MQ=60)

                                                          ATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCA                                     >  SRR4302540.9359249/1‑94 (MQ=60)

                                                          ATCACACCCGGCAACATTTATTGCCTCTTTTGTTTGCAGATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCA                                     <  SRR4302540.9257540/94‑1 (MQ=60)

                                                           TCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAA                                    <  SRR4302540.311682/94‑1 (MQ=60)

                                                           TCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAA                                    <  SRR4302540.1631604/94‑1 (MQ=60)

                                                           TCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAA                                    <  SRR4302540.9297549/94‑1 (MQ=60)

                                                            CTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAT                                   <  SRR4302540.7612115/94‑1 (MQ=60)

                                                            CTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAT                                   >  SRR4302540.4991817/1‑94 (MQ=60)

                                                            CTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAT                                   >  SRR4302540.1276224/1‑94 (MQ=60)

                                                            CTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAT                                   >  SRR4302540.7104745/1‑94 (MQ=60)

                                                            CTCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAAT                                   >  SRR4302540.8712728/1‑94 (MQ=60)

                                                             TCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATG                                  >  SRR4302540.4426987/1‑94 (MQ=60)

                                                             TCTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATG                                  <  SRR4302540.1017513/94‑1 (MQ=60)

                                                              CTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGT                                 <  SRR4302540.3273446/94‑1 (MQ=60)

                                                              CTCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGT                                 <  SRR4302540.3339331/94‑1 (MQ=60)

                                                               TCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTG                                <  SRR4302540.1811310/94‑1 (MQ=60)

                                                               TCCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTG                                >  SRR4302540.2745737/1‑94 (MQ=60)

                                                                CCCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGA                               <  SRR4302540.6560172/94‑1 (MQ=60)

                                                                 CCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGAT                              <  SRR4302540.283199/94‑1 (MQ=60)

                                                                 CCGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGAT                              >  SRR4302540.1443048/1‑94 (MQ=60)

                                                                  CGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATA                             >  SRR4302540.5905606/1‑94 (MQ=60)

                                                                  CGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATA                             <  SRR4302540.3395103/94‑1 (MQ=60)

                                                                  CGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATA                             >  SRR4302540.2274460/1‑94 (MQ=60)

                                                                  CGGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATA                             >  SRR4302540.9118726/1‑94 (MQ=60)

                                                                   GGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACGTTCATCAATGTGATAG                            <  SRR4302540.6926581/94‑1 (MQ=60)

                                                                   GGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAG                            <  SRR4302540.6666582/94‑1 (MQ=60)

                                                                   GGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAG                            <  SRR4302540.532418/94‑1 (MQ=60)

                                                                   CGCAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAG                            <  SRR4302540.3365734/94‑1 (MQ=60)

                                                                     CAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAT                          >  SRR4302540.7381946/1‑94 (MQ=60)

                                                                     CAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAT                          >  SRR4302540.5591638/1‑94 (MQ=60)

                                                                     CAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAT                          <  SRR4302540.5597503/94‑1 (MQ=60)

                                                                     CAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAT                          <  SRR4302540.8717555/94‑1 (MQ=60)

                                                                     CAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAT                          >  SRR4302540.8013134/1‑94 (MQ=60)

                                                                     CAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAT                          >  SRR4302540.3634087/1‑94 (MQ=60)

                                                                     CAACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGAT                          <  SRR4302540.2576138/94‑1 (MQ=60)

                                                                      AACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATT                         >  SRR4302540.3193453/1‑94 (MQ=60)

                                                                      AACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATT                         >  SRR4302540.416244/1‑94 (MQ=60)

                                                                       ACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTC                        <  SRR4302540.8837441/94‑1 (MQ=60)

                                                                       ACATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTC                        >  SRR4302540.9063869/1‑94 (MQ=60)

                                                                        CATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCC                       >  SRR4302540.5508314/1‑94 (MQ=60)

                                                                         ATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCT                      >  SRR4302540.6711297/1‑94 (MQ=60)

                                                                         ATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCT                      <  SRR4302540.6102540/94‑1 (MQ=60)

                                                                         ATTTATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCT                      >  SRR4302540.9606758/1‑94 (MQ=60)

                                                                          TTTATTGCCGCTTTTGTTTGCTTATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGCTTTCTC                     >  SRR4302540.9000376/1‑94 (MQ=60)

                                                                           TTATTTGCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCT                    <  SRR4302540.4602370/94‑1 (MQ=60)

                                                                            TATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTC                   <  SRR4302540.6377180/94‑1 (MQ=60)

                                                                            TATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTC                   >  SRR4302540.3556207/1‑94 (MQ=60)

                                                                             ATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCC                  <  SRR4302540.6492004/94‑1 (MQ=60)

                                                                             ATTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCC                  <  SRR4302540.2710836/94‑1 (MQ=60)

                                                                              TTGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCC                 <  SRR4302540.3429236/94‑1 (MQ=60)

                                                                               TGCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCG                <  SRR4302540.2493479/94‑1 (MQ=60)

                                                                                GCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGC               >  SRR4302540.4718530/1‑94 (MQ=60)

                                                                                GCCGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGC               >  SRR4302540.10065533/1‑94 (MQ=60)

                                                                                  CGCTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCAT             <  SRR4302540.8189176/94‑1 (MQ=60)

                                                                                    CTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTT           <  SRR4302540.5107967/94‑1 (MQ=60)

                                                                                    CTTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTT           >  SRR4302540.7493453/1‑94 (MQ=60)

                                                                                    CTTTTGTTTCCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTT           <  SRR4302540.2820892/94‑1 (MQ=60)

                                                                                    CTTGTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTT           <  SRR4302540.5696698/94‑1 (MQ=60)

                                                                                     TTTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTA          >  SRR4302540.10121697/1‑94 (MQ=60)

                                                                                      TTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTAT         <  SRR4302540.2296267/94‑1 (MQ=60)

                                                                                      TTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTAT         <  SRR4302540.8385659/94‑1 (MQ=60)

                                                                                      TTTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTAT         <  SRR4302540.3001468/94‑1 (MQ=60)

                                                                                       TTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATG        >  SRR4302540.3400572/1‑94 (MQ=60)

                                                                                       TTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATG        >  SRR4302540.1049781/1‑94 (MQ=60)

                                                                                       TTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATG        >  SRR4302540.1049780/1‑94 (MQ=60)

                                                                                       TTGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATG        <  SRR4302540.4659094/94‑1 (MQ=60)

                                                                                        TGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGG       >  SRR4302540.7211628/1‑94 (MQ=60)

                                                                                        TGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGG       >  SRR4302540.1576939/1‑94 (MQ=60)

                                                                                        TGTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGG       <  SRR4302540.1162204/94‑1 (MQ=60)

                                                                                         GTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGG      >  SRR4302540.1134620/1‑94 (MQ=60)

                                                                                         GTTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGG      >  SRR4302540.6173760/1‑94 (MQ=60)

                                                                                          TTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGA     <  SRR4302540.7636688/94‑1 (MQ=60)

                                                                                          TTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGA     <  SRR4302540.4501915/94‑1 (MQ=60)

                                                                                          TTTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGA     >  SRR4302540.4884707/1‑94 (MQ=60)

                                                                                           TTGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAA    <  SRR4302540.6349395/94‑1 (MQ=60)

                                                                                            TGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAAT   <  SRR4302540.3789747/94‑1 (MQ=60)

                                                                                            TGCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAAT   <  SRR4302540.7318887/94‑1 (MQ=60)

                                                                                             GCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATG  >  SRR4302540.6641716/1‑94 (MQ=60)

                                                                                             GCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATG  >  SRR4302540.6641715/1‑94 (MQ=60)

                                                                                             GCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATG  <  SRR4302540.8339681/94‑1 (MQ=60)

                                                                                             GCATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATG  <  SRR4302540.4969142/94‑1 (MQ=60)

ATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCCCGGCAACATTTATTGCCGCTTTTGTTTACATATTCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATG  >  NC_000913/3851318‑3851504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`