Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,851,510	T→C	intergenic (‑895/‑33)	ivbL ← / → emrD	ilvB operon leader peptide/2‑module integral membrane pump

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,851,510	0	T	C	99.7%	1959.7 / ‑4.1	605	intergenic (‑895/‑33)	ivbL/emrD	ilvB operon leader peptide/2‑module integral membrane pump
Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (253/350); total (254/351)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.58e-01

Only 100 of 610 total aligned reads displayed.

GCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG  >  NC_000913/3851420‑3851599

gCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGa                                                                                         <  2:5431340/93‑1 (MQ=255)

  cGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACt                                                                                       <  2:71703/93‑1 (MQ=255)

   gCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACtt                                                                                      >  2:4507342/1‑93 (MQ=255)

   gCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACtt                                                                                      >  1:3199572/1‑93 (MQ=255)

   gCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACtt                                                                                      >  2:8050594/1‑93 (MQ=255)

    cTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTa                                                                                     <  2:7629961/93‑1 (MQ=255)

     tAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAt                                                                                    >  2:235815/1‑93 (MQ=255)

     tAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAt                                                                                    >  1:6149579/1‑93 (MQ=255)

     tAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAt                                                                                    <  2:1667852/93‑1 (MQ=255)

     tAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAt                                                                                    >  2:3798929/1‑93 (MQ=255)

       aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc                                                                                  >  1:7918184/1‑93 (MQ=255)

       aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc                                                                                  >  2:1286294/1‑93 (MQ=255)

        aCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCt                                                                                 <  2:940297/93‑1 (MQ=255)

        aCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCt                                                                                 >  2:3298178/1‑93 (MQ=255)

          aaTTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTaa                                                                               <  2:9294533/93‑1 (MQ=255)

           aTTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAACGACTTATTCTAat                                                                              >  2:8264567/1‑93 (MQ=255)

            ttCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatt                                                                             <  2:6536717/93‑1 (MQ=255)

            ttCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatt                                                                             >  2:3025086/1‑93 (MQ=255)

             tCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatta                                                                            <  1:672293/93‑1 (MQ=255)

              ccccATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAattat                                                                           <  1:8707625/93‑1 (MQ=255)

              caccATTCCTGGCGAATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAattat                                                                           >  2:5725731/3‑93 (MQ=255)

                 cATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAtttt                                                                        <  1:489867/93‑1 (MQ=255)

                  aTTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAttttt                                                                       >  2:737162/1‑93 (MQ=255)

                   ttCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTta                                                                      >  1:5050063/1‑93 (MQ=255)

                   ttCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTta                                                                      >  2:3992111/1‑93 (MQ=255)

                     ccTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTtata                                                                    <  1:6591646/93‑1 (MQ=255)

                        ggCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATaaaa                                                                 <  1:2190389/93‑1 (MQ=255)

                          cGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGc                                                               <  1:7636702/93‑1 (MQ=255)

                           gTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCa                                                              >  1:9598082/1‑93 (MQ=255)

                           gTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCa                                                              >  2:7830843/1‑93 (MQ=255)

                            tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt                                                             >  1:2394347/1‑93 (MQ=255)

                            tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt                                                             >  2:1123646/1‑93 (MQ=255)

                             atatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATc                                                            <  2:8694164/93‑1 (MQ=255)

                              tatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATcc                                                           <  1:701797/93‑1 (MQ=255)

                              tatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATcc                                                           >  1:4584291/1‑93 (MQ=255)

                              tatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATcc                                                           >  1:9758950/1‑93 (MQ=255)

                              tatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATcc                                                           >  1:1305299/1‑93 (MQ=255)

                               atCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCg                                                          >  2:3448437/1‑93 (MQ=255)

                               atCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCg                                                          >  2:6321359/1‑93 (MQ=255)

                                  tGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGa                                                       >  2:607434/1‑93 (MQ=255)

                                   ggCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGAt                                                      >  1:1891209/1‑93 (MQ=255)

                                   ggCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGAt                                                      >  2:883827/1‑93 (MQ=255)

                                    gCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATa                                                     <  1:4758325/93‑1 (MQ=255)

                                       aaCATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATg                                                  <  2:9763464/93‑1 (MQ=255)

                                       aaCATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATg                                                  >  1:5958744/1‑93 (MQ=255)

                                        aCATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGa                                                 <  2:4998239/93‑1 (MQ=255)

                                           ttCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaaa                                              >  1:858721/1‑93 (MQ=255)

                                           ttCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAGCCGTGATAATGaaaa                                              <  2:2615770/93‑1 (MQ=255)

                                             catcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTTTTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAgg                                            <  1:8265011/93‑1 (MQ=255)

                                             catcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAgg                                            >  1:9865851/1‑93 (MQ=255)

                                              atcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGc                                           >  1:339267/1‑93 (MQ=255)

                                               tcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCa                                          <  2:6689163/93‑1 (MQ=255)

                                               tcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCa                                          >  2:1760322/1‑93 (MQ=255)

                                                caATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCaa                                         <  1:4158104/93‑1 (MQ=255)

                                                  aTGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAg                                       >  1:9222176/1‑93 (MQ=255)

                                                  aTGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAg                                       >  2:5318625/1‑93 (MQ=255)

                                                  aTGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAg                                       <  1:2080326/93‑1 (MQ=255)

                                                  aTGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAg                                       >  1:8188632/1‑93 (MQ=255)

                                                   tgtgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGa                                      >  1:807680/1‑93 (MQ=255)

                                                   tgtgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGa                                      <  2:8936917/93‑1 (MQ=255)

                                                   tgtgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGa                                      <  2:1486463/93‑1 (MQ=255)

                                                   tgtgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGa                                      <  2:4237584/93‑1 (MQ=255)

                                                     tgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaaa                                    >  1:7454592/1‑93 (MQ=255)

                                                     tgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaaa                                    <  2:9064175/93‑1 (MQ=255)

                                                     tgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaaa                                    >  2:8650055/1‑93 (MQ=255)

                                                         aGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTc                                <  2:4591185/93‑1 (MQ=255)

                                                          gATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCa                               <  1:5263738/93‑1 (MQ=255)

                                                          gATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCa                               >  1:1204337/1‑93 (MQ=255)

                                                             tCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAtt                            <  1:6424375/93‑1 (MQ=255)

                                                             tCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAtt                            >  2:5609455/1‑93 (MQ=255)

                                                             tCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAtt                            <  2:6461068/93‑1 (MQ=255)

                                                              ccTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAttt                           >  2:2217806/1‑93 (MQ=255)

                                                              ccTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAttt                           <  1:2322725/93‑1 (MQ=255)

                                                                tctcCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGt                         >  1:5824345/1‑93 (MQ=255)

                                                                  tcCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTa                       <  2:1920327/93‑1 (MQ=255)

                                                                   cccGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTAt                      >  2:7726200/1‑93 (MQ=255)

                                                                    ccGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTAtt                     <  2:2724176/93‑1 (MQ=255)

                                                                     cGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTg                    >  2:8355225/1‑93 (MQ=255)

                                                                        aTTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATg                 >  1:8415860/1‑93 (MQ=255)

                                                                        aTTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATg                 >  1:2788997/1‑93 (MQ=255)

                                                                        aTTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATg                 >  1:1767402/1‑93 (MQ=255)

                                                                         tttATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGt                <  1:8958456/93‑1 (MQ=255)

                                                                         tttATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGt                >  1:1047873/1‑93 (MQ=255)

                                                                         tttATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGt                >  1:557918/1‑93 (MQ=255)

                                                                          ttATGAGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGtt               <  2:9697110/93‑1 (MQ=255)

                                                                           tATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTg              <  2:9598888/93‑1 (MQ=255)

                                                                               ggAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTAt          >  2:366158/1‑93 (MQ=255)

                                                                                 aaTGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTa        <  2:483500/93‑1 (MQ=255)

                                                                                 aaTGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTa        <  1:689923/93‑1 (MQ=255)

                                                                                  aTGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTAc       <  1:3907695/93‑1 (MQ=255)

                                                                                    gCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTc     >  1:4335333/1‑93 (MQ=255)

                                                                                    gCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTc     <  2:1039213/93‑1 (MQ=255)

                                                                                    gCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTc     <  2:6826682/93‑1 (MQ=255)

                                                                                    gCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACATCAATTTGTTATTGATGTTGGTATTACTc     <  2:7096262/93‑1 (MQ=255)

                                                                                      gTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGt   <  2:5877408/93‑1 (MQ=255)

                                                                                      gTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGt   <  1:3703312/93‑1 (MQ=255)

                                                                                      gTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGt   <  1:7278962/93‑1 (MQ=255)

                                                                                      gTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGt   <  1:1575536/93‑1 (MQ=255)

                                                                                       tAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTg  <  1:2593078/93‑1 (MQ=255)

                                                                                       tAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTg  <  1:305260/93‑1 (MQ=255)

GCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG  >  NC_000913/3851420‑3851599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 304 total aligned reads displayed.

TCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGCCG  >  NC_000913/3851417‑3851603

TCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGC                                                                                               >  SRR4302540.3433596/1‑94 (MQ=60)

 CTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCG                                                                                              <  SRR4302540.10138005/94‑1 (MQ=60)

 CTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCG                                                                                              <  SRR4302540.2910430/94‑1 (MQ=60)

  TGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGA                                                                                             >  SRR4302540.2520686/1‑94 (MQ=60)

   GCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGAC                                                                                            >  SRR4302540.2166632/1‑94 (MQ=60)

   GCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGAC                                                                                            >  SRR4302540.4017604/1‑94 (MQ=60)

     CGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTT                                                                                          <  SRR4302540.5398843/94‑1 (MQ=60)

     CGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTT                                                                                          >  SRR4302540.3234322/1‑94 (MQ=60)

     CGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTT                                                                                          <  SRR4302540.7184153/94‑1 (MQ=60)

      GCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTA                                                                                         <  SRR4302540.939136/94‑1 (MQ=60)

      GCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTA                                                                                         <  SRR4302540.3232694/94‑1 (MQ=60)

       CTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAT                                                                                        >  SRR4302540.6218071/1‑94 (MQ=60)

        TAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATT                                                                                       <  SRR4302540.1548170/94‑1 (MQ=60)

        CAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATT                                                                                       <  SRR4302540.520808/94‑1 (MQ=60)

         AAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTC                                                                                      >  SRR4302540.8010486/1‑94 (MQ=60)

          AACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCT                                                                                     <  SRR4302540.6969502/94‑1 (MQ=60)

            CCATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGCATGCATAGCGCCTTATTCTAA                                                                                   >  SRR4302540.7796352/1‑94 (MQ=60)

            CAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCCTTTCTGGCAATGCGTAGCGACTTTTTCTAT                                                                                   >  SRR4302540.7855761/1‑94 (MQ=60)

            CAATCACCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAA                                                                                   <  SRR4302540.5196980/94‑1 (MQ=60)

             AATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAAT                                                                                  >  SRR4302540.2269986/1‑94 (MQ=60)

             AATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAAT                                                                                  <  SRR4302540.2559159/94‑1 (MQ=60)

              ATTCCCCATTCCTGTCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATT                                                                                 <  SRR4302540.6050967/94‑1 (MQ=60)

              ATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATT                                                                                 <  SRR4302540.3349905/94‑1 (MQ=60)

              ATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATT                                                                                 >  SRR4302540.190299/1‑94 (MQ=60)

              ATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATT                                                                                 >  SRR4302540.6704787/1‑94 (MQ=60)

              ATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATT                                                                                 >  SRR4302540.1317500/1‑94 (MQ=60)

              ATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATT                                                                                 <  SRR4302540.7175716/94‑1 (MQ=60)

               TTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTA                                                                                <  SRR4302540.9311544/94‑1 (MQ=60)

               TTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTA                                                                                <  SRR4302540.5747240/94‑1 (MQ=60)

               TTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTA                                                                                <  SRR4302540.8695452/94‑1 (MQ=60)

               TTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTA                                                                                >  SRR4302540.7045205/1‑94 (MQ=60)

                TCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAT                                                                               <  SRR4302540.679495/94‑1 (MQ=60)

                TCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAT                                                                               <  SRR4302540.6419873/94‑1 (MQ=60)

                 CCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATT                                                                              <  SRR4302540.6615060/94‑1 (MQ=60)

                 CCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATT                                                                              <  SRR4302540.1759834/94‑1 (MQ=60)

                 CCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATT                                                                              <  SRR4302540.1759835/94‑1 (MQ=60)

                  CCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTT                                                                             >  SRR4302540.7606437/1‑94 (MQ=60)

                  CCCATTCCGGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTT                                                                             <  SRR4302540.8981759/94‑1 (MQ=60)

                   CCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTT                                                                            <  SRR4302540.5121914/94‑1 (MQ=60)

                    CATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTT                                                                           <  SRR4302540.495116/94‑1 (MQ=60)

                     ATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTA                                                                          <  SRR4302540.8604621/94‑1 (MQ=60)

                     ATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTA                                                                          >  SRR4302540.4352861/1‑94 (MQ=60)

                     ATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTA                                                                          >  SRR4302540.6304359/1‑94 (MQ=60)

                     ATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTA                                                                          >  SRR4302540.5104667/1‑94 (MQ=60)

                       TCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATA                                                                        <  SRR4302540.4319648/94‑1 (MQ=60)

                        CCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAA                                                                       <  SRR4302540.9246153/94‑1 (MQ=60)

                        CCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAA                                                                       <  SRR4302540.6664647/94‑1 (MQ=60)

                        CCTCGCGTATATCTGGGTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAA                                                                       <  SRR4302540.8491853/94‑1 (MQ=60)

                         CTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAA                                                                      >  SRR4302540.3887597/1‑94 (MQ=60)

                         CTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAA                                                                      <  SRR4302540.1154010/94‑1 (MQ=60)

                         CTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAA                                                                      <  SRR4302540.4598555/94‑1 (MQ=60)

                          TGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCTTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAA                                                                     <  SRR4302540.8062071/94‑1 (MQ=60)

                          TGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAA                                                                     >  SRR4302540.9896295/1‑94 (MQ=60)

                           GGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAG                                                                    <  SRR4302540.2214038/94‑1 (MQ=60)

                           GGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAG                                                                    <  SRR4302540.4258850/94‑1 (MQ=60)

                            GCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGC                                                                   >  SRR4302540.1064878/1‑94 (MQ=60)

                            GCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCCAATTATTTTTATAAAAGC                                                                   >  SRR4302540.1064879/1‑94 (MQ=60)

                             CGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCA                                                                  <  SRR4302540.8903377/94‑1 (MQ=60)

                             CGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCA                                                                  >  SRR4302540.9711326/1‑94 (MQ=60)

                              GTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAT                                                                 >  SRR4302540.6119992/1‑94 (MQ=60)

                              GTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAT                                                                 >  SRR4302540.1383696/1‑94 (MQ=60)

                              GTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAT                                                                 >  SRR4302540.2420146/1‑94 (MQ=60)

                               TATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATC                                                                >  SRR4302540.8146200/1‑94 (MQ=60)

                               TATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATC                                                                <  SRR4302540.3311463/94‑1 (MQ=60)

                               TATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATC                                                                <  SRR4302540.2026389/94‑1 (MQ=60)

                                ATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCC                                                               >  SRR4302540.705671/1‑94 (MQ=60)

                                ATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCC                                                               >  SRR4302540.2277742/1‑94 (MQ=60)

                                ATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCC                                                               >  SRR4302540.9783178/1‑94 (MQ=60)

                                ATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCC                                                               >  SRR4302540.9873424/1‑94 (MQ=60)

                                ATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCC                                                               >  SRR4302540.1249205/1‑94 (MQ=60)

                                ATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAACGACTTATTCTAATTATTTTTATAAAAGCATCC                                                               >  SRR4302540.9839639/1‑94 (MQ=60)

                                 TATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCG                                                              <  SRR4302540.6662191/94‑1 (MQ=60)

                                 TATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCG                                                              <  SRR4302540.709331/94‑1 (MQ=60)

                                   TCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTG                                                            <  SRR4302540.7628642/94‑1 (MQ=60)

                                     TGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGAT                                                          >  SRR4302540.1345535/1‑94 (MQ=60)

                                      TGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATA                                                         <  SRR4302540.5962343/94‑1 (MQ=60)

                                      GGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATA                                                         >  SRR4302540.6782294/1‑94 (MQ=60)

                                       GCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAA                                                        <  SRR4302540.4809099/94‑1 (MQ=60)

                                        CTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAAT                                                       <  SRR4302540.4702917/94‑1 (MQ=60)

                                         TAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATG                                                      >  SRR4302540.3784882/1‑94 (MQ=60)

                                         TAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATG                                                      >  SRR4302540.6024647/1‑94 (MQ=60)

                                         TAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATG                                                      <  SRR4302540.3085273/94‑1 (MQ=60)

                                         TAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATG                                                      <  SRR4302540.2064882/94‑1 (MQ=60)

                                         TAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATG                                                      >  SRR4302540.187053/1‑94 (MQ=60)

                                           ACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAA                                                    <  SRR4302540.5977613/94‑1 (MQ=60)

                                           ACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAA                                                    <  SRR4302540.8988180/94‑1 (MQ=60)

                                            CATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAA                                                   <  SRR4302540.6341807/94‑1 (MQ=60)

                                            CATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAA                                                   >  SRR4302540.3083895/1‑94 (MQ=60)

                                            CATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAA                                                   <  SRR4302540.8846479/94‑1 (MQ=60)

                                             ATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAA                                                  >  SRR4302540.4817187/1‑94 (MQ=60)

                                             ATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAA                                                  >  SRR4302540.8472024/1‑94 (MQ=60)

                                             ATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAA                                                  >  SRR4302540.465340/1‑94 (MQ=60)

                                              TTCATCAATGTGATAGATTCCTCTCCCGCATTCATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAG                                                 >  SRR4302540.6910735/1‑94 (MQ=60)

                                               TCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGG                                                >  SRR4302540.3462996/1‑94 (MQ=60)

                                               TCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGG                                                <  SRR4302540.3990189/94‑1 (MQ=60)

                                                CATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTTTTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGC                                               <  SRR4302540.8361050/94‑1 (MQ=60)

                                                CATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGC                                               <  SRR4302540.8361052/94‑1 (MQ=60)

                                                 ATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCA                                              <  SRR4302540.3062827/94‑1 (MQ=60)

                                                 ATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCA                                              <  SRR4302540.6745231/94‑1 (MQ=60)

                                                 ATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCA                                              <  SRR4302540.9190988/94‑1 (MQ=60)

                                                 ATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCA                                              <  SRR4302540.979180/94‑1 (MQ=60)

                                                  TCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAA                                             <  SRR4302540.7071614/94‑1 (MQ=60)

                                                   CAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAA                                            <  SRR4302540.5754517/94‑1 (MQ=60)

                                                    AATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAG                                           >  SRR4302540.8283768/1‑94 (MQ=60)

                                                    AATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAG                                           >  SRR4302540.9332769/1‑94 (MQ=60)

                                                    AATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAG                                           <  SRR4302540.7380376/94‑1 (MQ=60)

                                                     ATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGA                                          >  SRR4302540.676101/1‑94 (MQ=60)

                                                     ATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGA                                          <  SRR4302540.2102677/94‑1 (MQ=60)

                                                     ATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGA                                          >  SRR4302540.2248791/1‑94 (MQ=60)

                                                     ATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGA                                          >  SRR4302540.8753309/1‑94 (MQ=60)

                                                     ATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGA                                          <  SRR4302540.879158/94‑1 (MQ=60)

                                                     ATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGA                                          >  SRR4302540.816263/1‑94 (MQ=60)

                                                      TGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAA                                         <  SRR4302540.5203373/94‑1 (MQ=60)

                                                      TGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAA                                         <  SRR4302540.2371369/94‑1 (MQ=60)

                                                      TGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAA                                         >  SRR4302540.8509513/1‑94 (MQ=60)

                                                      TGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAA                                         <  SRR4302540.4911636/94‑1 (MQ=60)

                                                       GTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAC                                        >  SRR4302540.8302481/1‑94 (MQ=60)

                                                       GTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAA                                        >  SRR4302540.7537699/1‑94 (MQ=60)

                                                       GTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAA                                        <  SRR4302540.2111309/94‑1 (MQ=60)

                                                        TGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAAC                                       <  SRR4302540.6512911/94‑1 (MQ=60)

                                                        TGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAAC                                       <  SRR4302540.2682205/94‑1 (MQ=60)

                                                        TGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAAC                                       <  SRR4302540.2736724/94‑1 (MQ=60)

                                                        TGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAAC                                       <  SRR4302540.2520568/94‑1 (MQ=60)

                                                         GATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACG                                      <  SRR4302540.1231484/94‑1 (MQ=60)

                                                         GATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACG                                      <  SRR4302540.8753315/94‑1 (MQ=60)

                                                          ATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGT                                     <  SRR4302540.465314/94‑1 (MQ=60)

                                                             GATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAA                                  <  SRR4302540.4082277/94‑1 (MQ=60)

                                                             GATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAA                                  >  SRR4302540.9392055/1‑94 (MQ=60)

                                                             GATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAA                                  <  SRR4302540.5321171/94‑1 (MQ=60)

                                                              ATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAT                                 >  SRR4302540.3822056/1‑94 (MQ=60)

                                                              ATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAT                                 >  SRR4302540.2422346/1‑94 (MQ=60)

                                                              ATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAT                                 >  SRR4302540.5056728/1‑94 (MQ=60)

                                                                TCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTT                               <  SRR4302540.6495882/94‑1 (MQ=60)

                                                                TCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTT                               <  SRR4302540.3525693/94‑1 (MQ=60)

                                                                 CCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTG                              <  SRR4302540.2347735/94‑1 (MQ=60)

                                                                 CCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTG                              >  SRR4302540.5658861/1‑94 (MQ=60)

                                                                  CTCTCCCGCATTTATTGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGT                             <  SRR4302540.1911978/94‑1 (MQ=60)

                                                                  CTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGT                             >  SRR4302540.8322333/1‑94 (MQ=60)

                                                                  CTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGT                             >  SRR4302540.5888729/1‑94 (MQ=60)

                                                                  CTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGT                             >  SRR4302540.9601736/1‑94 (MQ=60)

                                                                  CTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGT                             >  SRR4302540.3196658/1‑94 (MQ=60)

                                                                    CTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTA                           >  SRR4302540.5914688/1‑94 (MQ=60)

                                                                     TCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTAT                          >  SRR4302540.730023/1‑94 (MQ=60)

                                                                     TCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTAT                          <  SRR4302540.8643818/94‑1 (MQ=60)

                                                                      CCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATT                         >  SRR4302540.5459557/1‑94 (MQ=60)

                                                                      CCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATT                         >  SRR4302540.4307126/1‑94 (MQ=60)

                                                                       CCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTG                        <  SRR4302540.4570182/94‑1 (MQ=60)

                                                                       CCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTG                        <  SRR4302540.4406406/94‑1 (MQ=60)

                                                                         GCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGAT                      <  SRR4302540.3202806/94‑1 (MQ=60)

                                                                         GCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGAT                      >  SRR4302540.3019666/1‑94 (MQ=60)

                                                                         GCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGAT                      <  SRR4302540.7520840/94‑1 (MQ=60)

                                                                         GCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGAT                      <  SRR4302540.8199724/94‑1 (MQ=60)

                                                                          CATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATG                     >  SRR4302540.8513540/1‑94 (MQ=60)

                                                                          CATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATG                     <  SRR4302540.4428788/94‑1 (MQ=60)

                                                                          CATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATG                     >  SRR4302540.1786579/1‑94 (MQ=60)

                                                                          CATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATG                     >  SRR4302540.2819114/1‑94 (MQ=60)

                                                                           ATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGT                    <  SRR4302540.819995/94‑1 (MQ=60)

                                                                           ATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGT                    >  SRR4302540.6058020/1‑94 (MQ=60)

                                                                           ATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGT                    >  SRR4302540.1801853/1‑94 (MQ=60)

                                                                           ATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGT                    >  SRR4302540.1058525/1‑94 (MQ=60)

                                                                           ATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGT                    >  SRR4302540.563993/1‑94 (MQ=60)

                                                                            TTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTT                   <  SRR4302540.2404692/94‑1 (MQ=60)

                                                                            TTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTT                   <  SRR4302540.6814015/94‑1 (MQ=60)

                                                                             TTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTG                  >  SRR4302540.7954296/1‑94 (MQ=60)

                                                                              TATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGG                 >  SRR4302540.76983/1‑94 (MQ=60)

                                                                               ATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGT                <  SRR4302540.5003860/94‑1 (MQ=60)

                                                                                TGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTA               <  SRR4302540.9911966/94‑1 (MQ=60)

                                                                                TGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTA               >  SRR4302540.1280894/1‑94 (MQ=60)

                                                                                 GGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTAT              <  SRR4302540.8346975/94‑1 (MQ=60)

                                                                                  GGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATT             <  SRR4302540.9949878/94‑1 (MQ=60)

                                                                                  GGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATT             <  SRR4302540.1621708/94‑1 (MQ=60)

                                                                                  GGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATT             <  SRR4302540.469358/94‑1 (MQ=60)

                                                                                  GGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATT             <  SRR4302540.4958833/94‑1 (MQ=60)

                                                                                   GAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTA            <  SRR4302540.1718697/94‑1 (MQ=60)

                                                                                   GAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTA            <  SRR4302540.271253/94‑1 (MQ=60)

                                                                                   GAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTA            <  SRR4302540.8608478/94‑1 (MQ=60)

                                                                                    AATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTTATGTTGGTATTAC           >  SRR4302540.21596/1‑94 (MQ=60)

                                                                                    AATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTAC           <  SRR4302540.697327/94‑1 (MQ=60)

                                                                                    AATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTAC           >  SRR4302540.6669995/1‑94 (MQ=60)

                                                                                    AATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTAC           <  SRR4302540.2395244/94‑1 (MQ=60)

                                                                                     ATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACT          >  SRR4302540.558372/1‑94 (MQ=60)

                                                                                     ATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACT          >  SRR4302540.1544320/1‑94 (MQ=60)

                                                                                     ATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACT          <  SRR4302540.3950054/94‑1 (MQ=60)

                                                                                       GCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCG        <  SRR4302540.3312366/94‑1 (MQ=60)

                                                                                       GCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCG        <  SRR4302540.8193096/94‑1 (MQ=60)

                                                                                        CGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGT       <  SRR4302540.10024098/94‑1 (MQ=60)

                                                                                        CGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGT       >  SRR4302540.7435045/1‑94 (MQ=60)

                                                                                        CGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGT       <  SRR4302540.7919460/94‑1 (MQ=60)

                                                                                        CGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGT       >  SRR4302540.8104275/1‑94 (MQ=60)

                                                                                         GTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG      <  SRR4302540.10026922/94‑1 (MQ=60)

                                                                                         GTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG      <  SRR4302540.7360179/94‑1 (MQ=60)

                                                                                         GTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG      <  SRR4302540.4899862/94‑1 (MQ=60)

                                                                                         GTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG      <  SRR4302540.3743743/94‑1 (MQ=60)

                                                                                         GTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG      <  SRR4302540.3635079/94‑1 (MQ=60)

                                                                                          TAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGG     <  SRR4302540.2621041/94‑1 (MQ=60)

                                                                                           AGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGC    <  SRR4302540.3921171/94‑1 (MQ=60)

                                                                                           AGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGC    >  SRR4302540.1173844/1‑94 (MQ=60)

                                                                                            GCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGCC   >  SRR4302540.5508997/1‑94 (MQ=60)

                                                                                            GCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGCC   <  SRR4302540.530011/94‑1 (MQ=60)

                                                                                             CGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGCCG  >  SRR4302540.3317362/1‑94 (MQ=60)

TCTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGCCG  >  NC_000913/3851417‑3851603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`