Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,851,510 |
T→C |
intergenic (‑895/‑33) |
ivbL ← / → emrD |
ilvB operon leader peptide/2‑module integral membrane pump |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,851,510 | 0 | T | C | 100.0%
| 717.3
/ NA
| 220 | intergenic (‑895/‑33) | ivbL/emrD | ilvB operon leader peptide/2‑module integral membrane pump |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (82/138); total (82/138) |
Only 100 of 221 total aligned reads displayed.
GCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG > NC_000913/3851420‑3851599
|
gCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGa > 2:3036025/1‑93 (MQ=255)
gCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGa > 1:5405153/1‑93 (MQ=255)
gCCGCGATAGAATTTCCCCTTCCTGGCGAATATCTGGCTAACATTGATCAATGTTATAGGTTACTCTCCCGCGTTTATCGGCGTGCGGAGCGa > 2:831117/1‑93 (MQ=255)
ccGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGAc > 1:3181264/1‑93 (MQ=255)
ccGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGAc < 1:1094333/93‑1 (MQ=255)
ccGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGAc < 1:5505352/93‑1 (MQ=255)
cTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTa < 2:5151826/93‑1 (MQ=255)
cTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTCATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTa < 1:4436491/93‑1 (MQ=255)
tAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAt < 1:3741854/93‑1 (MQ=255)
aaaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGACAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAtt < 1:3380217/93‑1 (MQ=255)
aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc < 1:4979206/93‑1 (MQ=255)
aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc > 2:3837302/1‑93 (MQ=255)
aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc > 2:6169780/1‑93 (MQ=255)
aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc < 1:6113413/93‑1 (MQ=255)
cAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTa > 2:2524620/1‑93 (MQ=255)
aTTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAat < 1:1739017/93‑1 (MQ=255)
aTTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAat < 2:2433296/93‑1 (MQ=255)
aTTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAat > 1:6252959/1‑93 (MQ=255)
ttCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatt < 2:846701/93‑1 (MQ=255)
tCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatta < 1:3778608/93‑1 (MQ=255)
tCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatta < 2:1240123/93‑1 (MQ=255)
tCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatta > 2:4643818/1‑93 (MQ=255)
cccATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGAATTATTCTAattatt < 2:277403/93‑1 (MQ=255)
ccATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAttt < 1:5857742/93‑1 (MQ=255)
ccATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAttt < 2:5540672/93‑1 (MQ=255)
ccATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAttt < 2:40982/93‑1 (MQ=255)
cATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAtttt > 2:2113799/1‑93 (MQ=255)
aTTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAttttt < 2:3322805/93‑1 (MQ=255)
aTTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAttttt < 1:731873/93‑1 (MQ=255)
aTTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAttttt > 2:4294243/1‑93 (MQ=255)
ttCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTta < 2:1736589/93‑1 (MQ=255)
ttCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTta < 1:4345897/93‑1 (MQ=255)
tCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTtat > 2:2045708/1‑93 (MQ=255)
ccTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTtata < 1:46023/93‑1 (MQ=255)
tGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATaaa < 1:4828329/93‑1 (MQ=255)
tGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATaaa < 2:3202454/93‑1 (MQ=255)
ggCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATaaaa > 1:4910147/1‑93 (MQ=255)
ggCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATaaaa > 2:4876961/1‑93 (MQ=255)
gCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAg < 2:5774709/93‑1 (MQ=255)
tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt > 2:3632720/1‑93 (MQ=255)
tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt < 2:5184265/93‑1 (MQ=255)
tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt < 2:3608164/93‑1 (MQ=255)
tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt > 2:1303140/1‑93 (MQ=255)
tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt > 1:1514351/1‑93 (MQ=255)
atatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATc < 1:2715783/93‑1 (MQ=255)
atatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATc < 1:787348/93‑1 (MQ=255)
tatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATcc < 2:1950083/93‑1 (MQ=255)
tatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATcc > 2:6010655/1‑93 (MQ=255)
tatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCAAATTATTTTTATAAAAGCATcc < 2:5161197/93‑1 (MQ=255)
atCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCg < 2:1894671/93‑1 (MQ=255)
tCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGt < 2:4579038/93‑1 (MQ=255)
ggCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGAt > 1:3278477/1‑93 (MQ=255)
ggCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGAt < 1:3883988/93‑1 (MQ=255)
cTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATaa < 1:1941386/93‑1 (MQ=255)
cTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATaa > 2:4445702/1‑93 (MQ=255)
cTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATaa < 2:730909/93‑1 (MQ=255)
cTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATaa < 2:2145802/93‑1 (MQ=255)
tAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAAt > 1:1708638/1‑93 (MQ=255)
tAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAAt < 2:6285942/93‑1 (MQ=255)
aaCATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATg > 1:3054559/1‑93 (MQ=255)
aaCATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATg > 2:4078043/1‑93 (MQ=255)
aTTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaa < 1:4016320/93‑1 (MQ=255)
ttCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaaa < 2:3790477/93‑1 (MQ=255)
ttCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaaa < 1:2837424/93‑1 (MQ=255)
ttCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaaa < 2:6226551/93‑1 (MQ=255)
catcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAgg < 2:3226429/93‑1 (MQ=255)
atcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGc < 1:1821296/93‑1 (MQ=255)
tcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCa < 1:558434/93‑1 (MQ=255)
caATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCaa < 1:4134115/93‑1 (MQ=255)
aaTGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCaaa < 2:4039495/93‑1 (MQ=255)
aaTGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCaaa < 1:4659533/93‑1 (MQ=255)
aaTGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCaaa > 1:5450203/1‑93 (MQ=255)
tgtgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGa > 1:1666260/1‑93 (MQ=255)
gtgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaa > 2:6152602/1‑93 (MQ=255)
tgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaaa < 1:5296984/93‑1 (MQ=255)
tgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaaa < 1:2505399/93‑1 (MQ=255)
tgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaaa < 1:5616183/93‑1 (MQ=255)
gATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCa > 2:3817111/1‑93 (MQ=255)
gATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCa < 1:244390/93‑1 (MQ=255)
gATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCGAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCa > 1:3388338/1‑93 (MQ=255)
aTTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCaa < 1:4124552/93‑1 (MQ=255)
ttCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAt > 2:602840/1‑93 (MQ=255)
tCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAtt < 1:526297/93‑1 (MQ=255)
ccTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAttt < 1:1992064/93‑1 (MQ=255)
ctctCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTg > 2:1347223/1‑93 (MQ=255)
cctcCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGt < 2:1865064/92‑1 (MQ=255)
cctcCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGt < 1:5185269/92‑1 (MQ=255)
ccGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTAtt < 2:3997978/93‑1 (MQ=255)
gCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGa > 2:1502851/1‑93 (MQ=255)
aTTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATg > 1:991455/1‑93 (MQ=255)
ttATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGtt < 1:1567958/93‑1 (MQ=255)
ttATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGtt > 1:1512919/1‑93 (MQ=255)
ttATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGtt > 2:4398239/1‑93 (MQ=255)
aTGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTgg > 1:3614649/1‑93 (MQ=255)
gggAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTa < 2:5236231/93‑1 (MQ=255)
gggAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTa < 2:511163/93‑1 (MQ=255)
aTGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTAc < 1:2212832/93‑1 (MQ=255)
tGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACt < 1:5225201/93‑1 (MQ=255)
gCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTc < 2:5359020/93‑1 (MQ=255)
gTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGt > 2:583222/1‑93 (MQ=255)
|
GCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG > NC_000913/3851420‑3851599
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGCC > NC_000913/3851418‑3851602
|
CTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCG < SRR4302533.3692965/94‑1 (MQ=60)
CTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCG < SRR4302533.2735060/94‑1 (MQ=60)
CTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCG < SRR4302533.5405054/94‑1 (MQ=60)
CTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCG < SRR4302533.1642760/94‑1 (MQ=60)
TGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGA > SRR4302533.5437635/1‑94 (MQ=60)
GCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGAC > SRR4302533.3200835/1‑94 (MQ=60)
CCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACT < SRR4302533.1100809/94‑1 (MQ=60)
CCGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACT < SRR4302533.5538572/94‑1 (MQ=60)
CGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTT < SRR4302533.2934754/94‑1 (MQ=60)
CGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTT > SRR4302533.1712210/1‑94 (MQ=60)
GCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTA > SRR4302533.756830/1‑94 (MQ=60)
GCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTA < SRR4302533.4594542/94‑1 (MQ=60)
CTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAT > SRR4302533.3379990/1‑94 (MQ=60)
CTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTCATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAT < SRR4302533.4463310/94‑1 (MQ=60)
TAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATT < SRR4302533.3764802/94‑1 (MQ=60)
AAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTC < SRR4302533.4953614/94‑1 (MQ=60)
AAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTC < SRR4302533.3730977/94‑1 (MQ=60)
AAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGACAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTC < SRR4302533.3401082/94‑1 (MQ=60)
AACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCT < SRR4302533.6150306/94‑1 (MQ=60)
AACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCT < SRR4302533.2678338/94‑1 (MQ=60)
AACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCT < SRR4302533.5009397/94‑1 (MQ=60)
AATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAAT > SRR4302533.6290360/1‑94 (MQ=60)
ATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATT < SRR4302533.3789274/94‑1 (MQ=60)
ATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATT < SRR4302533.1749564/94‑1 (MQ=60)
TCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAT < SRR4302533.3801760/94‑1 (MQ=60)
TCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAT < SRR4302533.6346772/94‑1 (MQ=60)
CCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTT < SRR4302533.5893153/94‑1 (MQ=60)
CATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTT < SRR4302533.5252826/94‑1 (MQ=60)
CATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTT > SRR4302533.876139/1‑94 (MQ=60)
ATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTA < SRR4302533.736181/94‑1 (MQ=60)
TTCCTGTCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTAT < SRR4302533.2888065/94‑1 (MQ=60)
TTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTAT < SRR4302533.4372093/94‑1 (MQ=60)
CCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAA > SRR4302533.5162747/1‑94 (MQ=60)
CCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAA < SRR4302533.46342/94‑1 (MQ=60)
CCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAA > SRR4302533.5646116/1‑94 (MQ=60)
CCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAA < SRR4302533.2248386/94‑1 (MQ=60)
CCTGGCGGATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAA > SRR4302533.972366/1‑94 (MQ=60)
TGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAA < SRR4302533.4857592/94‑1 (MQ=60)
TGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAA > SRR4302533.4939892/1‑94 (MQ=60)
GGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAG < SRR4302533.3974067/94‑1 (MQ=60)
GCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGC > SRR4302533.4229526/1‑94 (MQ=60)
CGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCA > SRR4302533.308152/1‑94 (MQ=60)
GTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAT > SRR4302533.1523474/1‑94 (MQ=60)
ATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCGGCATTTATGTGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCC < SRR4302533.2033238/94‑1 (MQ=60)
ATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCC < SRR4302533.2732457/94‑1 (MQ=60)
ATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCC < SRR4302533.791974/94‑1 (MQ=60)
ATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCC < SRR4302533.1748044/94‑1 (MQ=60)
ATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCC < SRR4302533.5495386/94‑1 (MQ=60)
ATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGT > SRR4302533.4640181/1‑94 (MQ=60)
ATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGT > SRR4302533.2794785/1‑94 (MQ=60)
ATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGT > SRR4302533.527289/1‑94 (MQ=60)
TCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTG < SRR4302533.5472399/94‑1 (MQ=60)
CTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGA > SRR4302533.152366/1‑94 (MQ=60)
TGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGAT > SRR4302533.3298720/1‑94 (MQ=60)
GGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATA < SRR4302533.3907686/94‑1 (MQ=60)
CTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAAT < SRR4302533.1953226/94‑1 (MQ=60)
CTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAAT > SRR4302533.1718990/1‑94 (MQ=60)
CTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAAT < SRR4302533.1363323/94‑1 (MQ=60)
TAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATG > SRR4302533.3073278/1‑94 (MQ=60)
ACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAA > SRR4302533.1624578/1‑94 (MQ=60)
ATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAA < SRR4302533.5308566/94‑1 (MQ=60)
ATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAA < SRR4302533.4040772/94‑1 (MQ=60)
TTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAG < SRR4302533.5584631/94‑1 (MQ=60)
TTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAG < SRR4302533.2854889/94‑1 (MQ=60)
TCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGG > SRR4302533.2513819/1‑94 (MQ=60)
ATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCA < SRR4302533.1832421/94‑1 (MQ=60)
TCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAA < SRR4302533.561751/94‑1 (MQ=60)
CAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAA < SRR4302533.4159208/94‑1 (MQ=60)
CAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAA > SRR4302533.5483032/1‑94 (MQ=60)
AATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAG > SRR4302533.6089409/1‑94 (MQ=60)
AATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAG < SRR4302533.4687770/94‑1 (MQ=60)
AATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAG < SRR4302533.4767927/94‑1 (MQ=60)
AATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAG < SRR4302533.5430743/94‑1 (MQ=60)
ATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGA > SRR4302533.1676328/1‑94 (MQ=60)
TGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAA > SRR4302533.4417666/1‑94 (MQ=60)
GTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAA > SRR4302533.1759703/1‑94 (MQ=60)
TGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAAC < SRR4302533.5650133/94‑1 (MQ=60)
TGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAAC < SRR4302533.3975882/94‑1 (MQ=60)
TGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAAC < SRR4302533.35451/94‑1 (MQ=60)
TGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAAC < SRR4302533.5328709/94‑1 (MQ=60)
TGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAAC < SRR4302533.2520844/94‑1 (MQ=60)
GATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACG < SRR4302533.1533916/94‑1 (MQ=60)
ATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGT > SRR4302533.404563/1‑94 (MQ=60)
TAGATTCCTCTCCTGCATTTATGGGAATGCGTAGCGACTTATTCTAATTACTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTC < SRR4302533.3406051/94‑1 (MQ=60)
AGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCA > SRR4302533.3825593/1‑94 (MQ=60)
AGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCGAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCA > SRR4302533.3409260/1‑94 (MQ=60)
GATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAA > SRR4302533.4898507/1‑94 (MQ=60)
GATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAA < SRR4302533.245904/94‑1 (MQ=60)
ATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAT < SRR4302533.4149590/94‑1 (MQ=60)
TCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTT > SRR4302533.3440972/1‑94 (MQ=60)
TCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTT < SRR4302533.529415/94‑1 (MQ=60)
CCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTG < SRR4302533.2004274/94‑1 (MQ=60)
CCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTG < SRR4302533.4605547/94‑1 (MQ=60)
CCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTG < SRR4302533.2004273/94‑1 (MQ=60)
CCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTT < SRR4302533.5216568/94‑1 (MQ=60)
CTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTA < SRR4302533.3226011/94‑1 (MQ=60)
CATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATG > SRR4302533.997251/1‑94 (MQ=60)
CATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATG > SRR4302533.6168520/1‑94 (MQ=60)
TTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAACGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTT < SRR4302533.1718083/94‑1 (MQ=60)
TTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTT > SRR4302533.1522033/1‑94 (MQ=60)
TTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTT < SRR4302533.5055583/94‑1 (MQ=60)
TTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTG < SRR4302533.1577399/94‑1 (MQ=60)
TATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGG > SRR4302533.3636891/1‑94 (MQ=60)
ATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGT < SRR4302533.1869119/94‑1 (MQ=60)
AATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTAC < SRR4302533.5858567/94‑1 (MQ=60)
ATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACT < SRR4302533.2226485/94‑1 (MQ=60)
TGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTC > SRR4302533.5653304/1‑94 (MQ=60)
TGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTC < SRR4302533.5256646/94‑1 (MQ=60)
CGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGT > SRR4302533.2200493/1‑94 (MQ=60)
CGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGT < SRR4302533.4150657/94‑1 (MQ=60)
TAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGG < SRR4302533.5459917/94‑1 (MQ=60)
GCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGCC < SRR4302533.5343749/94‑1 (MQ=60)
|
CTGCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGCC > NC_000913/3851418‑3851602
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
