Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,874,579	A→G	M1T (ATG→ACG) †	yidA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,874,579	0	A	G	100.0%	1343.5 / NA	407	M1T (ATG→ACG) †	yidA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (214/193); total (214/193)

Only 100 of 433 total aligned reads displayed.

GCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAA  >  NC_000913/3874489‑3874669

gCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTg                                                                                          <  1:7835436/93‑1 (MQ=255)

 cGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGa                                                                                         <  1:7429867/93‑1 (MQ=255)

 cGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGa                                                                                         <  2:7624082/93‑1 (MQ=255)

  ggCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAg                                                                                        <  1:7345365/93‑1 (MQ=255)

  ggCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAg                                                                                        <  1:6211104/93‑1 (MQ=255)

   gCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGt                                                                                       <  2:5294504/93‑1 (MQ=255)

    cAATCGCATTTTTAACGGCGGGGGGAATGGGGTGATCGGGGAGCAGAAGGGGGCCCTCCATATTGATAGCAATGAGTTTAATAGCCGTGAGtt                                                                                      >  2:7933964/1‑93 (MQ=255)

    cAATCGCAGTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGtt                                                                                      <  1:3526222/93‑1 (MQ=255)

     aaTCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTc                                                                                     <  1:9022755/93‑1 (MQ=255)

       tCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTccc                                                                                   <  2:4817641/93‑1 (MQ=255)

        cGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTcccc                                                                                  <  2:2422973/93‑1 (MQ=255)

          cATTTTTAACGGCGGGGGAAATGGGGTGATCGGGGAGCAGAAGGGGGCCATCCATATCGATAGCAATGAGGTTAATAGCCGTGAGTTtccccg                                                                                >  2:4950578/1‑91 (MQ=255)

           aTTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAgg                                                                               <  1:44911/93‑1 (MQ=255)

           aTTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAgg                                                                               <  2:9133229/93‑1 (MQ=255)

            tttttAACGGCGGGTGGAAGGGTGTGATCGGGCAGCAGAAGGGGGGCATCCATATCGATAGCAATGAGGTTAATAGCCGTGAGGTCCCCAggg                                                                              >  2:6869030/1‑92 (MQ=255)

             ttttAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTa                                                                             <  1:1876088/93‑1 (MQ=255)

               ttAACGGCGGGTGAAATGGTTTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGa                                                                           <  2:1525982/93‑1 (MQ=255)

               ttAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGa                                                                           <  2:2048525/93‑1 (MQ=255)

                 aaCGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAtt                                                                         <  2:6490502/93‑1 (MQ=255)

                 aaCGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAtt                                                                         <  2:4445147/93‑1 (MQ=255)

                   cggcggGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTgg                                                                       <  1:1252667/93‑1 (MQ=255)

                       gggTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTcc                                                                   <  2:5147636/93‑1 (MQ=255)

                         gTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTg                                                                 <  1:1099989/93‑1 (MQ=255)

                             aaTGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGAccc                                                             >  1:5203624/1‑93 (MQ=255)

                               tgatgtgATCGGGCAGCAGACGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAt                                                           <  1:8036164/90‑1 (MQ=255)

                               tGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAt                                                           >  2:8108086/1‑93 (MQ=255)

                                ggTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATg                                                          <  1:8538909/93‑1 (MQ=255)

                                ggTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATg                                                          >  1:468578/1‑93 (MQ=255)

                                 gtgtGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGc                                                         <  2:1441487/93‑1 (MQ=255)

                                 gtgtGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGc                                                         >  2:2902587/1‑93 (MQ=255)

                                  tgtgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCt                                                        >  1:6402034/1‑93 (MQ=255)

                                  agtgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTAAATAGCGGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCt                                                        >  1:1653765/2‑93 (MQ=255)

                                   gtgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTa                                                       >  2:8405221/1‑93 (MQ=255)

                                    tgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTaa                                                      >  1:2680946/1‑93 (MQ=255)

                                    tgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTaa                                                      <  2:1890477/93‑1 (MQ=255)

                                     gATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAc                                                     <  1:5971927/93‑1 (MQ=255)

                                     gATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAc                                                     <  1:5415059/93‑1 (MQ=255)

                                      aTCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAcg                                                    >  2:6097971/1‑93 (MQ=255)

                                      aTCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAcg                                                    <  1:7018810/93‑1 (MQ=255)

                                       tCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAcgg                                                   >  1:5582927/1‑92 (MQ=255)

                                         gggCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGa                                                 <  1:2990884/93‑1 (MQ=255)

                                         gggCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGa                                                 <  2:255870/93‑1 (MQ=255)

                                            cagcagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTc                                              <  1:8202677/93‑1 (MQ=255)

                                            cagcagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTc                                              <  1:3103677/93‑1 (MQ=255)

                                             agcagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTcc                                             >  2:262037/1‑93 (MQ=255)

                                              gcagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCg                                            >  2:7224713/1‑93 (MQ=255)

                                              gcagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCg                                            >  1:8665321/1‑93 (MQ=255)

                                               cagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGc                                           <  1:9467524/93‑1 (MQ=255)

                                               cagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGc                                           <  2:8671775/93‑1 (MQ=255)

                                                 gAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGccc                                         >  1:4174523/1‑91 (MQ=255)

                                                  aaGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCa                                        >  1:4402819/1‑93 (MQ=255)

                                                   aGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCaa                                       >  2:5760648/1‑93 (MQ=255)

                                                   aGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCaa                                       >  2:1747654/1‑93 (MQ=255)

                                                        gCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATc                                  >  2:3953827/1‑93 (MQ=255)

                                                        gCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATc                                  <  1:10031839/93‑1 (MQ=255)

                                                         ccatccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCa                                 >  1:975058/1‑93 (MQ=255)

                                                         ccatccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCa                                 >  1:8889387/1‑93 (MQ=255)

                                                         ccatccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCa                                 <  1:1051428/93‑1 (MQ=255)

                                                          catccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAg                                >  1:6711271/1‑93 (MQ=255)

                                                           atccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGt                               >  1:7576305/1‑93 (MQ=255)

                                                           atccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGt                               >  1:2367388/1‑93 (MQ=255)

                                                             ccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCCGTac                             >  2:9407328/1‑93 (MQ=255)

                                                              catATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTaca                            >  2:1056133/1‑93 (MQ=255)

                                                              catATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCCCAAAAATCAGTaca                            >  2:3359426/1‑93 (MQ=255)

                                                               atatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaa                           >  2:985249/1‑93 (MQ=255)

                                                               atatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaa                           <  1:6929811/93‑1 (MQ=255)

                                                                tatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGTATCCGCTCAAAAATCAGTacaaa                          >  1:6285120/1‑92 (MQ=255)

                                                                tatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaac                          >  2:3773024/1‑93 (MQ=255)

                                                                tatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaac                          >  2:5903071/1‑93 (MQ=255)

                                                                tatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaac                          >  1:402602/1‑93 (MQ=255)

                                                                tatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCCCAAAAATCAGTacaac                          >  2:3436982/1‑93 (MQ=255)

                                                                 atCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaaca                         >  1:5069948/1‑93 (MQ=255)

                                                                  tCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAacac                        >  2:961273/1‑93 (MQ=255)

                                                                   cGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAcc                       <  2:3508040/93‑1 (MQ=255)

                                                                   cGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCCCAAAAATCAGTACAACAcc                       <  1:2183215/93‑1 (MQ=255)

                                                                    gATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAccc                      >  2:5487640/1‑93 (MQ=255)

                                                                    gATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCCCAAAAATCAGTACAACAccc                      >  1:4916188/1‑93 (MQ=255)

                                                                     aTAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCg                     <  2:2215778/93‑1 (MQ=255)

                                                                     aTAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCg                     >  2:6207630/1‑93 (MQ=255)

                                                                     aTAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCCCAAAAATCAGTACAACACCCg                     >  1:5731182/1‑93 (MQ=255)

                                                                      tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                    >  2:2341720/1‑93 (MQ=255)

                                                                      tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                    <  2:4110363/93‑1 (MQ=255)

                                                                       aGCAATGAGTGTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAg                   <  2:9039583/93‑1 (MQ=255)

                                                                        gCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAgg                  >  1:1502023/1‑93 (MQ=255)

                                                                          aaTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa                >  2:1262636/1‑93 (MQ=255)

                                                                          aaTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa                >  2:4346496/1‑93 (MQ=255)

                                                                          aaTGAGTTTAATAGCCGTGAGTTCCCCAGGGAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa                >  2:4386281/1‑93 (MQ=255)

                                                                             gAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaaaa             <  1:3807866/93‑1 (MQ=255)

                                                                              aGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAg            <  1:7151741/93‑1 (MQ=255)

                                                                              aGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAg            >  1:45823/1‑93 (MQ=255)

                                                                              aGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAg            <  2:821651/93‑1 (MQ=255)

                                                                              aGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAg            >  2:9751634/1‑93 (MQ=255)

                                                                               gTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgg           >  2:7133485/1‑93 (MQ=255)

                                                                               gTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgg           >  2:4270128/1‑93 (MQ=255)

                                                                                 ttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgggg         >  2:6694873/1‑93 (MQ=255)

                                                                                 ttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgggg         <  2:2694081/93‑1 (MQ=255)

                                                                                   aaTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGa       <  1:3199931/93‑1 (MQ=255)

                                                                                   aaTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGa       <  1:2738056/93‑1 (MQ=255)

                                                                                     tAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATg     <  1:1939334/93‑1 (MQ=255)

                                                                                      aGCCATAAGTTCCCCAGGTAGACTGGTTCCTGACCTATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGc    <  2:6299806/93‑1 (MQ=255)

GCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAA  >  NC_000913/3874489‑3874669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 238 total aligned reads displayed.

GCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGC  >  NC_000913/3874486‑3874672

GCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCG                                                                                               <  SRR4302540.15832/94‑1 (MQ=60)

 CTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGT                                                                                              <  SRR4302540.7505384/94‑1 (MQ=60)

 CTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGT                                                                                              <  SRR4302540.3055770/94‑1 (MQ=60)

  TGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTG                                                                                             <  SRR4302540.7580961/94‑1 (MQ=60)

  TGCGGCAATCGCATTTTTAACGGCGGGGGGAATGGTGTGATCGGGCAGCAGAAGGGGGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTG                                                                                             >  SRR4302540.9898405/1‑94 (MQ=60)

   GCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGA                                                                                            <  SRR4302540.7926984/94‑1 (MQ=60)

   GCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGA                                                                                            <  SRR4302540.1124018/94‑1 (MQ=60)

    gcGCAATCTCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAG                                                                                           <  SRR4302540.7627528/92‑1 (MQ=60)

    gcGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTTCCATCCATATCTATAGCAATGAGTTTAATAGCCGTGAG                                                                                           <  SRR4302540.7627529/92‑1 (MQ=60)

    CGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAG                                                                                           <  SRR4302540.2068858/94‑1 (MQ=60)

    CGGCAATCGCATTTTTAACGGCGGGGGAAATGGGGTGATCGGGCAGCAGAAGGGGGCCATCCCTATCGATAGCAATGAGTTTAATAGCCGTGAG                                                                                           >  SRR4302540.10053141/1‑94 (MQ=60)

     GGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGT                                                                                          <  SRR4302540.6280222/94‑1 (MQ=60)

     GGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGT                                                                                          <  SRR4302540.4104046/94‑1 (MQ=60)

     GGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGT                                                                                          <  SRR4302540.7427320/94‑1 (MQ=60)

     GGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGT                                                                                          <  SRR4302540.3366187/94‑1 (MQ=60)

     GGCAATCGCATTTTTAACGGCGGGGGGAATGGTGTGATCGGGGAGGAGGAGGGGGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGT                                                                                          >  SRR4302540.7864397/1‑94 (MQ=60)

      GCAATCGCATTTTTAACGGCGGGGGAAATGGGGGGATCGGGGAGCAGAAGGGGGCCATCCCGATCGATAGCAATGAGTTTTATAACCGTGAGTT                                                                                         >  SRR4302540.7964484/1‑94 (MQ=44)

       CAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTC                                                                                        <  SRR4302540.4987554/94‑1 (MQ=60)

       CAATCGCAGTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTC                                                                                        <  SRR4302540.3564678/94‑1 (MQ=60)

        AATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCC                                                                                       <  SRR4302540.9131025/94‑1 (MQ=60)

         ATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCC                                                                                      <  SRR4302540.1665368/94‑1 (MQ=60)

          TCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCC                                                                                     <  SRR4302540.1929987/94‑1 (MQ=60)

          TCGCATTTTTAACGGCGGGTGAAATGGGGTGGTCGGGCAGCAGAAGGGGGCCATCCCTATCGATAGCAATGAGTTTAATATCCGTGAGATCCCC                                                                                     >  SRR4302540.5127863/1‑94 (MQ=60)

          TCGCATTTTTAACGGCGGGGGGAATGGGGTGATCGGGCAGCAGAAGGGGGCCATCCATATCGATAGCAATGAGGTTAAAAGCCGGGGGTTCCCC                                                                                     >  SRR4302540.6132007/1‑94 (MQ=60)

           CGCATTTTTAACGGCGGGGGAAATGGTGTGATCGGGGAGCAGAAGGGGGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCC                                                                                    >  SRR4302540.7746759/1‑94 (MQ=60)

            GCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAG                                                                                   <  SRR4302540.1953079/94‑1 (MQ=60)

               TTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTA                                                                                <  SRR4302540.1527086/94‑1 (MQ=60)

                TTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAG                                                                               <  SRR4302540.1896632/94‑1 (MQ=60)

                 TTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGA                                                                              <  SRR4302540.6943788/94‑1 (MQ=60)

                  TTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAT                                                                             <  SRR4302540.3004429/94‑1 (MQ=60)

                  TTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGAT                                                                             <  SRR4302540.3004144/94‑1 (MQ=60)

                     ACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGG                                                                          <  SRR4302540.1065948/94‑1 (MQ=60)

                      CGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGT                                                                         <  SRR4302540.1265476/94‑1 (MQ=60)

                        GCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTC                                                                       <  SRR4302540.8944368/94‑1 (MQ=60)

                        GCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTC                                                                       <  SRR4302540.8004715/94‑1 (MQ=60)

                         CGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCC                                                                      <  SRR4302540.7041325/94‑1 (MQ=60)

                         CGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCC                                                                      <  SRR4302540.5344276/94‑1 (MQ=60)

                          GGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCT                                                                     <  SRR4302540.4639856/94‑1 (MQ=60)

                          GGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCT                                                                     >  SRR4302540.7603259/1‑94 (MQ=60)

                          GGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCT                                                                     >  SRR4302540.516681/1‑94 (MQ=60)

                          GGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCT                                                                     <  SRR4302540.6468641/94‑1 (MQ=60)

                            GTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGC                                                                   >  SRR4302540.8558411/1‑94 (MQ=60)

                            GTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGA                                                                   >  SRR4302540.4534665/1‑94 (MQ=60)

                            GTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGA                                                                   <  SRR4302540.1111316/94‑1 (MQ=60)

                            GTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGA                                                                   >  SRR4302540.7465452/1‑94 (MQ=60)

                            GTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGA                                                                   <  SRR4302540.4500048/94‑1 (MQ=60)

                            GTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGA                                                                   <  SRR4302540.2143686/94‑1 (MQ=60)

                               AAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCCATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCC                                                                >  SRR4302540.7132461/1‑94 (MQ=60)

                               AAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCC                                                                >  SRR4302540.7132705/1‑94 (MQ=60)

                               AAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCC                                                                >  SRR4302540.5260302/1‑94 (MQ=60)

                                 ATGGTGTGATCGGGGAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAT                                                              <  SRR4302540.1424196/94‑1 (MQ=60)

                                 ATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAT                                                              <  SRR4302540.9138109/94‑1 (MQ=60)

                                 ATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAT                                                              >  SRR4302540.3190441/1‑94 (MQ=60)

                                 ATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAT                                                              <  SRR4302540.3208572/94‑1 (MQ=60)

                                 ATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAT                                                              <  SRR4302540.2373989/94‑1 (MQ=60)

                                  TGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATG                                                             >  SRR4302540.473595/1‑94 (MQ=60)

                                  TGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATG                                                             >  SRR4302540.473594/1‑94 (MQ=60)

                                   GGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGC                                                            <  SRR4302540.8638132/94‑1 (MQ=60)

                                    GTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCT                                                           >  SRR4302540.6473291/1‑94 (MQ=60)

                                    GTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCT                                                           <  SRR4302540.3034289/94‑1 (MQ=60)

                                    GTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCT                                                           <  SRR4302540.7365011/94‑1 (MQ=60)

                                    GAGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTAAATAGCGGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCT                                                           >  SRR4302540.1671786/1‑94 (MQ=60)

                                     TGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTA                                                          >  SRR4302540.6354292/1‑94 (MQ=60)

                                     TGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTA                                                          >  SRR4302540.2200604/1‑94 (MQ=60)

                                     TGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTA                                                          >  SRR4302540.7058415/1‑94 (MQ=60)

                                      GTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAA                                                         >  SRR4302540.2709942/1‑94 (MQ=60)

                                       TGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAC                                                        <  SRR4302540.5220348/94‑1 (MQ=60)

                                       TGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAC                                                        <  SRR4302540.4594089/94‑1 (MQ=60)

                                       TGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAC                                                        <  SRR4302540.2692813/94‑1 (MQ=60)

                                       TGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAC                                                        >  SRR4302540.1764087/1‑94 (MQ=60)

                                        GATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACG                                                       >  SRR4302540.7720840/1‑94 (MQ=60)

                                        GATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACG                                                       <  SRR4302540.5474600/94‑1 (MQ=60)

                                        GATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACG                                                       <  SRR4302540.5474601/94‑1 (MQ=60)

                                        GATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACG                                                       <  SRR4302540.6038021/94‑1 (MQ=60)

                                         ATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGC                                                      <  SRR4302540.7096765/94‑1 (MQ=60)

                                           CGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGA                                                    >  SRR4302540.5961158/1‑94 (MQ=60)

                                            GGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGAT                                                   <  SRR4302540.3023856/94‑1 (MQ=60)

                                            GGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGAT                                                   >  SRR4302540.4855173/1‑94 (MQ=60)

                                            GGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGAT                                                   <  SRR4302540.5567390/94‑1 (MQ=60)

                                             GGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAgcgctag                                                  >  SRR4302540.7329255/1‑87 (MQ=60)

                                              GCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTC                                                 >  SRR4302540.7013739/1‑94 (MQ=60)

                                               GAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCC                                                <  SRR4302540.6900078/94‑1 (MQ=60)

                                               CAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCC                                                <  SRR4302540.8297997/94‑1 (MQ=60)

                                               CAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCC                                                <  SRR4302540.3137661/94‑1 (MQ=60)

                                               CAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCC                                                >  SRR4302540.1521646/1‑94 (MQ=60)

                                               CAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGGTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCC                                                >  SRR4302540.5701075/1‑94 (MQ=60)

                                                AGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCG                                               >  SRR4302540.8765968/1‑94 (MQ=60)

                                                  CAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCT                                             >  SRR4302540.4270869/1‑94 (MQ=60)

                                                  CAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCT                                             <  SRR4302540.9579834/94‑1 (MQ=60)

                                                  CAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCT                                             <  SRR4302540.4817179/94‑1 (MQ=60)

                                                  CAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCT                                             >  SRR4302540.8539244/1‑94 (MQ=60)

                                                   AGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTC                                            >  SRR4302540.1026996/1‑94 (MQ=60)

                                                   AGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTC                                            >  SRR4302540.5387765/1‑94 (MQ=60)

                                                   AGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTC                                            >  SRR4302540.9597622/1‑94 (MQ=60)

                                                   AGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTC                                            <  SRR4302540.8993746/94‑1 (MQ=60)

                                                   AGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTC                                            <  SRR4302540.7441605/94‑1 (MQ=60)

                                                   AGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCCC                                            >  SRR4302540.4219826/1‑94 (MQ=60)

                                                    GAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCA                                           >  SRR4302540.4450562/1‑94 (MQ=60)

                                                    GAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCA                                           <  SRR4302540.4536919/94‑1 (MQ=60)

                                                      AGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAA                                         >  SRR4302540.6299177/1‑94 (MQ=60)

                                                      AGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAA                                         >  SRR4302540.6299178/1‑94 (MQ=60)

                                                       GGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAA                                        >  SRR4302540.8194601/1‑94 (MQ=60)

                                                       GGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAA                                        >  SRR4302540.871336/1‑94 (MQ=60)

                                                        GGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAA                                       <  SRR4302540.264443/94‑1 (MQ=60)

                                                         GTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAAT                                      >  SRR4302540.9055644/1‑94 (MQ=60)

                                                         GTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAAT                                      >  SRR4302540.5929190/1‑94 (MQ=60)

                                                         GTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAAT                                      <  SRR4302540.5236089/94‑1 (MQ=60)

                                                          TGCCATCCATCTCGATAGCAATGAGTTTCATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCGGACCCATGttaccggggtttcggtcccaaatc                                     >  SRR4302540.4207039/1‑70 (MQ=60)

                                                          TGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATC                                     >  SRR4302540.8089348/1‑94 (MQ=60)

                                                           GCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCA                                    <  SRR4302540.10148534/94‑1 (MQ=60)

                                                            CCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAG                                   <  SRR4302540.1062126/94‑1 (MQ=60)

                                                            CCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAG                                   >  SRR4302540.6785326/1‑94 (MQ=60)

                                                             CATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGT                                  >  SRR4302540.2392885/1‑94 (MQ=60)

                                                             CATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGT                                  <  SRR4302540.2699321/94‑1 (MQ=60)

                                                             CATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGT                                  <  SRR4302540.2719381/94‑1 (MQ=60)

                                                             CATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGT                                  >  SRR4302540.4030011/1‑94 (MQ=60)

                                                              ATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCgggtgattggtttcctgccccatgtaaacgggttccccccaaacaacaagaa                                 >  SRR4302540.2358310/1‑42 (MQ=60)

                                                              ATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAACAATCAGTA                                 >  SRR4302540.2358309/1‑94 (MQ=60)

                                                              ATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTA                                 >  SRR4302540.9368531/1‑94 (MQ=60)

                                                               TCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTAC                                <  SRR4302540.3674870/94‑1 (MQ=60)

                                                               TCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCCCAAAAATCAGTAC                                >  SRR4302540.578230/1‑94 (MQ=60)

                                                               TCCATATCGATAGCAATGAGTCTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGCTTCCGCCCAAACATCCGTAC                                >  SRR4302540.4646661/1‑94 (MQ=60)

                                                                CCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACA                               >  SRR4302540.8163506/1‑94 (MQ=60)

                                                                CCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCCCAAAAATCAGTACA                               >  SRR4302540.3764075/1‑94 (MQ=60)

                                                                 CATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCAGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAA                              <  SRR4302540.794853/94‑1 (MQ=60)

                                                                  ATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGTATCCGCTCAAAAATCAGTACAAA                             >  SRR4302540.6355069/1‑94 (MQ=60)

                                                                  ATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAAC                             <  SRR4302540.3029929/94‑1 (MQ=60)

                                                                  ATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAAC                             >  SRR4302540.5296933/1‑94 (MQ=60)

                                                                  ATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAAC                             >  SRR4302540.406800/1‑94 (MQ=60)

                                                                   TATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACA                            <  SRR4302540.3800232/94‑1 (MQ=60)

                                                                   TATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACA                            <  SRR4302540.7626341/94‑1 (MQ=60)

                                                                   TATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACA                            >  SRR4302540.4267024/1‑94 (MQ=60)

                                                                   TATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACA                            >  SRR4302540.8915675/1‑94 (MQ=60)

                                                                   TATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACA                            >  SRR4302540.4267026/1‑94 (MQ=60)

                                                                   TATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACA                            >  SRR4302540.5124762/1‑94 (MQ=60)

                                                                    ATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAC                           <  SRR4302540.5690172/94‑1 (MQ=60)

                                                                      CGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCC                         >  SRR4302540.9581393/1‑94 (MQ=60)

                                                                       GATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCG                        >  SRR4302540.1134762/1‑94 (MQ=60)

                                                                       GATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCCCAAAAATCAGTACAACACCCG                        >  SRR4302540.5794299/1‑94 (MQ=60)

                                                                       GATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTAACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCG                        <  SRR4302540.1928443/94‑1 (MQ=60)

                                                                       GATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGGAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCG                        >  SRR4302540.672078/1‑94 (MQ=60)

                                                                         TAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAG                      >  SRR4302540.6023586/1‑94 (MQ=60)

                                                                         TAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAG                      >  SRR4302540.62628/1‑94 (MQ=60)

                                                                          AGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGG                     >  SRR4302540.1518575/1‑94 (MQ=60)

                                                                           GCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGG                    >  SRR4302540.8551007/1‑94 (MQ=60)

                                                                           GCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCCCAAAAATCAGTACAACACCCGAGGG                    >  SRR4302540.9910821/1‑94 (MQ=60)

                                                                            CAATGAGTTTAATTGCCGTGAGTTCCTCTGGTAGATTGGTTCCTGTCTCATGCGATCGCGATTTCGCTCAAAAATCAGTACAACACCCGAGGGA                   >  SRR4302540.9045159/1‑94 (MQ=53)

                                                                            CAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA                   >  SRR4302540.8646954/1‑94 (MQ=60)

                                                                            CAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA                   <  SRR4302540.6359798/94‑1 (MQ=60)

                                                                            CAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTAAAACACCCGAGGGA                   >  SRR4302540.1082156/1‑94 (MQ=60)

                                                                             AATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAA                  >  SRR4302540.1871448/1‑94 (MQ=60)

                                                                              ATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAA                 >  SRR4302540.6535803/1‑94 (MQ=60)

                                                                               TGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA                >  SRR4302540.6121826/1‑94 (MQ=60)

                                                                               TGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAA                >  SRR4302540.2726221/1‑94 (MQ=60)

                                                                                GAGTTTAATAGGCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAG               <  SRR4302540.3039596/94‑1 (MQ=60)

                                                                                GAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAG               >  SRR4302540.46290/1‑94 (MQ=60)

                                                                                GAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAG               <  SRR4302540.8196836/94‑1 (MQ=60)

                                                                                GAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAG               <  SRR4302540.101865/94‑1 (MQ=60)

                                                                                GAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAG               <  SRR4302540.3849338/94‑1 (MQ=60)

                                                                                GAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAG               >  SRR4302540.6880578/1‑94 (MQ=60)

                                                                                GAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAG               <  SRR4302540.7480756/94‑1 (MQ=60)

                                                                                 AGTTTAATAGCCGTGAGTTCTCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGG              <  SRR4302540.7231439/94‑1 (MQ=60)

                                                                                 AGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGG              <  SRR4302540.5044870/94‑1 (MQ=60)

                                                                                 AGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGG              <  SRR4302540.237832/94‑1 (MQ=60)

                                                                                 AGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGG              >  SRR4302540.5750910/1‑94 (MQ=60)

                                                                                 AGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGG              >  SRR4302540.9857489/1‑94 (MQ=60)

                                                                                 AGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGG              <  SRR4302540.7231438/94‑1 (MQ=60)

                                                                                  GTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGG             >  SRR4302540.5576064/1‑94 (MQ=60)

                                                                                  GTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCCCAAAAATCAGTACAACACCCGAGGGAAAAGGG             <  SRR4302540.7821388/94‑1 (MQ=60)

                                                                                   TTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGG            <  SRR4302540.1403867/94‑1 (MQ=60)

                                                                                   TTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGG            <  SRR4302540.127925/94‑1 (MQ=60)

                                                                                     TAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGA          >  SRR4302540.3987917/1‑94 (MQ=60)

                                                                                     TAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGA          <  SRR4302540.4550927/94‑1 (MQ=60)

                                                                                     TAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGA          >  SRR4302540.7335023/1‑94 (MQ=60)

                                                                                     TAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGA          >  SRR4302540.6881265/1‑94 (MQ=60)

                                                                                     TAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGA          <  SRR4302540.4550928/94‑1 (MQ=60)

                                                                                     TAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGA          <  SRR4302540.1040595/94‑1 (MQ=60)

                                                                                      TATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGAT         <  SRR4302540.3234684/94‑1 (MQ=60)

                                                                                      ACTAGCCGTGAGTTCCCCAGGGAGATTGGTTCCTGACCCAGGCTAACGCGATTCCGCTCAAAAATCAGTACAACCCCCGAGGGAAAAGGGGGAT         <  SRR4302540.8829472/94‑1 (MQ=60)

                                                                                      AATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGAT         <  SRR4302540.3747785/94‑1 (MQ=60)

                                                                                      AATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGAT         <  SRR4302540.3234683/94‑1 (MQ=60)

                                                                                      AATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGAT         <  SRR4302540.2767610/94‑1 (MQ=60)

                                                                                      AATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGAT         <  SRR4302540.283437/94‑1 (MQ=60)

                                                                                       ATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATG        >  SRR4302540.4798870/1‑94 (MQ=60)

                                                                                       ATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATG        >  SRR4302540.5112293/1‑94 (MQ=60)

                                                                                        TAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGC       <  SRR4302540.1960454/94‑1 (MQ=60)

                                                                                         AGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCA      >  SRR4302540.7691318/1‑94 (MQ=60)

                                                                                          GCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAA     >  SRR4302540.4336544/1‑94 (MQ=60)

                                                                                           CCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAAC    <  SRR4302540.4058417/94‑1 (MQ=60)

                                                                                           CCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAAC    <  SRR4302540.1159828/94‑1 (MQ=60)

                                                                                           CCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAAC    >  SRR4302540.6127181/1‑94 (MQ=60)

                                                                                           CCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAAC    >  SRR4302540.6263063/1‑94 (MQ=60)

                                                                                            CGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACG   >  SRR4302540.9961421/1‑94 (MQ=60)

                                                                                            CGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACG   >  SRR4302540.99193/1‑94 (MQ=60)

                                                                                            CGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACG   <  SRR4302540.5936128/94‑1 (MQ=60)

                                                                                             GTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAGGGGGGATGCACCGC  >  SRR4302540.6761030/1‑94 (MQ=60)

                                                                                             GTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGC  <  SRR4302540.9390150/94‑1 (MQ=60)

                                                                                             GTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGC  >  SRR4302540.7704245/1‑94 (MQ=60)

                                                                                             GTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGAAACGC  >  SRR4302540.8161539/1‑94 (MQ=60)

                                                                                             CTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGC  <  SRR4302540.8574505/94‑1 (MQ=60)

GCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGC  >  NC_000913/3874486‑3874672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`