Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,881,483 Δ1 bp intergenic (‑126/‑482) dnaA ← / → rpmH DnaA/50S ribosomal subunit protein L34

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,881,4830G.100.0% 2421.3 / NA 531intergenic (‑126/‑482)dnaA/rpmHDnaA/50S ribosomal subunit protein L34
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (298/233);  total (298/233)

Only 100 of 540 total aligned reads displayed.

GGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTA  >  NC_000913/3881395‑3881570
                                                                                        |                                                                                       
 gCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGa                                                                                   >  1:9180220/1‑93 (MQ=255)
 gCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGa                                                                                   <  1:3017317/93‑1 (MQ=255)
   tGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATc                                                                                 <  1:9827338/93‑1 (MQ=255)
   tGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATc                                                                                 >  1:6514446/1‑93 (MQ=255)
   tGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATc                                                                                 <  1:2784175/93‑1 (MQ=255)
    gAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATcc                                                                                >  2:5627410/1‑93 (MQ=255)
    gAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATcc                                                                                >  2:2142701/1‑93 (MQ=255)
    gAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATcc                                                                                >  1:1878937/1‑93 (MQ=255)
    gAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATcc                                                                                >  1:1964636/1‑93 (MQ=255)
    gAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATcc                                                                                >  1:3154826/1‑93 (MQ=255)
     aaaCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCt                                                                               <  2:6060524/93‑1 (MQ=255)
     aaaCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCt                                                                               >  2:1444324/1‑93 (MQ=255)
     aaaCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCt                                                                               >  1:8476260/1‑93 (MQ=255)
      aaCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTAACGCACGAACCGCTGTCTGCGGTTATATGCCCTA‑TCAAGATCCTg                                                                              <  2:4066088/93‑1 (MQ=255)
       aCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGc                                                                             >  2:9024691/1‑93 (MQ=255)
        cATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCa                                                                            >  2:9852836/1‑93 (MQ=255)
         aTTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaa                                                                           >  2:8306084/1‑93 (MQ=255)
           tCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaaa                                                                         <  1:9349300/93‑1 (MQ=255)
           tCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaaa                                                                         >  2:7884438/1‑93 (MQ=255)
            cATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAAc                                                                        >  2:9737439/1‑93 (MQ=255)
             aTGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACg                                                                       >  2:1861555/1‑93 (MQ=255)
              tGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGa                                                                      >  2:5269322/1‑93 (MQ=255)
               gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAt                                                                     <  2:8146594/93‑1 (MQ=255)
               gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAt                                                                     <  2:7566566/93‑1 (MQ=255)
                aTTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATc                                                                    >  1:7315199/1‑93 (MQ=255)
                  tgttgACGTACGTCGAAAAGACCCTGCTTGCGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCgg                                                                  >  1:2357527/1‑93 (MQ=255)
                  tgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCgg                                                                  <  2:1599168/93‑1 (MQ=255)
                   gttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCggg                                                                 >  2:5402914/1‑93 (MQ=255)
                   gttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCggg                                                                 <  1:1329242/93‑1 (MQ=255)
                    ttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGa                                                                >  2:6283739/1‑93 (MQ=255)
                    ttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGa                                                                <  1:4580165/93‑1 (MQ=255)
                     tgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAc                                                               <  1:6168058/93‑1 (MQ=255)
                     tgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAc                                                               <  2:4909320/93‑1 (MQ=255)
                      gACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAcc                                                              >  1:6858242/1‑93 (MQ=255)
                      gACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAcc                                                              >  2:5772886/1‑93 (MQ=255)
                      gACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAcc                                                              >  2:3137601/1‑93 (MQ=255)
                       acgtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcg                                                             >  2:8843243/1‑93 (MQ=255)
                          tacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCgg                                                          >  1:5843976/1‑93 (MQ=255)
                          tacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCgg                                                          <  1:4400090/93‑1 (MQ=255)
                          tacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCgg                                                          <  2:1055261/93‑1 (MQ=255)
                           acgtCGAAAAGCCCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGa                                                         <  2:6987732/93‑1 (MQ=255)
                           acgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGa                                                         <  1:6655644/93‑1 (MQ=255)
                            cgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGAt                                                        <  2:6468800/93‑1 (MQ=255)
                            cgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGAt                                                        <  1:9463493/93‑1 (MQ=255)
                             gtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATc                                                       >  1:5602081/1‑93 (MQ=255)
                               cGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCAt                                                     >  1:3581867/1‑93 (MQ=255)
                                gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATa                                                    >  2:2389839/1‑93 (MQ=255)
                                gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATa                                                    >  1:8606718/1‑93 (MQ=255)
                                 aaaaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAg                                                   >  1:8877563/1‑93 (MQ=255)
                                 aaaaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAg                                                   >  2:8659939/1‑93 (MQ=255)
                                 aaaaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAg                                                   >  1:2274907/1‑93 (MQ=255)
                                   aaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGcc                                                 >  1:7816588/1‑93 (MQ=255)
                                   aaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGcc                                                 <  2:3916662/93‑1 (MQ=255)
                                     gACCCTGCTTGAGGGCGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTa                                               >  2:2972909/1‑93 (MQ=255)
                                       cccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaaa                                             <  2:9343431/93‑1 (MQ=255)
                                       cccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaaa                                             >  2:6682595/1‑93 (MQ=255)
                                       cccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaaa                                             <  2:3653861/93‑1 (MQ=255)
                                       cccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaaa                                             >  2:2741196/1‑93 (MQ=255)
                                          tGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATGATAGCCTAAACTg                                          >  2:4209567/1‑93 (MQ=255)
                                          tGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTg                                          >  1:2556027/1‑93 (MQ=255)
                                           gCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgc                                         >  2:7739461/1‑93 (MQ=255)
                                             ttGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgcgc                                       <  1:8329042/93‑1 (MQ=255)
                                             ttGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgcgc                                       >  2:8070540/1‑93 (MQ=255)
                                              tGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCa                                      <  1:1771478/93‑1 (MQ=255)
                                              tGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCa                                      >  1:36948/1‑93 (MQ=255)
                                                aGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAag                                    <  2:9546380/93‑1 (MQ=255)
                                                aGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAag                                    >  2:8782431/1‑93 (MQ=255)
                                                 gggTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAaga                                   >  1:9136326/1‑93 (MQ=255)
                                                 gggTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAaga                                   <  1:7658984/93‑1 (MQ=255)
                                                  ggTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAagag                                  <  2:7976803/93‑1 (MQ=255)
                                                   gTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAgaga                                 >  2:3493069/1‑93 (MQ=255)
                                                   gTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAgaga                                 <  1:49143/93‑1 (MQ=255)
                                                   gTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAgaga                                 >  2:460368/1‑93 (MQ=255)
                                                   gTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAgaga                                 >  1:1564945/1‑93 (MQ=255)
                                                     gACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtc                               <  1:6290748/93‑1 (MQ=255)
                                                      aCGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtct                              <  2:8485070/93‑1 (MQ=255)
                                                      aCGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtct                              <  1:8241818/93‑1 (MQ=255)
                                                       cGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtctt                             >  1:9705234/1‑93 (MQ=255)
                                                           cGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGt                         >  1:1690352/1‑93 (MQ=255)
                                                           cGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGt                         >  2:4004584/1‑93 (MQ=255)
                                                            gAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGtt                        >  1:4238485/1‑93 (MQ=255)
                                                             aaCCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGCTCATAGCCTAAACTGCGCAAGAGATCTTCTGttt                       >  2:7275478/1‑93 (MQ=255)
                                                             aaCCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGttt                       >  1:7975886/1‑93 (MQ=255)
                                                                cGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtctc                    <  1:4760016/93‑1 (MQ=255)
                                                                cGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtctc                    >  1:241425/1‑93 (MQ=255)
                                                                     tCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGa               >  2:1225176/1‑93 (MQ=255)
                                                                      cTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAt              >  1:5384613/1‑93 (MQ=255)
                                                                       tGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAtt             >  2:3806380/1‑93 (MQ=255)
                                                                       tGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAtt             <  1:3374447/93‑1 (MQ=255)
                                                                           gTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTcc         >  1:10002636/1‑93 (MQ=255)
                                                                           gTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTcc         >  1:6398076/1‑93 (MQ=255)
                                                                           gTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTcc         >  2:4506549/1‑93 (MQ=255)
                                                                           gTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTcc         >  2:2027909/1‑93 (MQ=255)
                                                                            ttATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTccc        <  1:7404095/93‑1 (MQ=255)
                                                                            ttATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTccc        >  1:1072913/1‑93 (MQ=255)
                                                                              atatGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGa      >  1:7236417/1‑93 (MQ=255)
                                                                                atGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAtt    <  2:2551960/93‑1 (MQ=255)
                                                                                atGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCACAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAtt    >  1:2180628/1‑93 (MQ=255)
                                                                                 tGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAttt   <  2:7103328/93‑1 (MQ=255)
                                                                                  gCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTa  <  1:3991495/93‑1 (MQ=255)
                                                                                        |                                                                                       
GGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTA  >  NC_000913/3881395‑3881570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 308 total aligned reads displayed.
ACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA  >  NC_000913/3881390‑3881576
                                                                                             |                                                                                             
ACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAT                                                                                               <  SRR4302540.2478519/94‑1 (MQ=60)
ACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAT                                                                                               >  SRR4302540.7132604/1‑94 (MQ=60)
ACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAT                                                                                               >  SRR4302540.6340512/1‑94 (MQ=60)
  TAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCA                                                                                            >  SRR4302540.7285886/1‑94 (MQ=60)
   AAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAA                                                                                           >  SRR4302540.6921703/1‑94 (MQ=60)
   AAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAA                                                                                           >  SRR4302540.6788450/1‑94 (MQ=60)
   AAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAA                                                                                           >  SRR4302540.148763/1‑94 (MQ=60)
    AGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAG                                                                                          >  SRR4302540.3970439/1‑94 (MQ=60)
    AGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAG                                                                                          >  SRR4302540.1748493/1‑94 (MQ=60)
    AGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAG                                                                                          <  SRR4302540.9778348/94‑1 (MQ=60)
     GGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGA                                                                                         >  SRR4302540.3427515/1‑94 (MQ=60)
     GGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGA                                                                                         >  SRR4302540.9290326/1‑94 (MQ=60)
      GCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGAT                                                                                        <  SRR4302540.3050486/94‑1 (MQ=60)
      GCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGAT                                                                                        <  SRR4302540.73518/94‑1 (MQ=60)
      GCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGAT                                                                                        <  SRR4302540.4712223/94‑1 (MQ=60)
       CTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATC                                                                                       >  SRR4302540.1348953/1‑94 (MQ=60)
       CTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATC                                                                                       >  SRR4302540.6586815/1‑94 (MQ=60)
       CTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATC                                                                                       >  SRR4302540.2128003/1‑94 (MQ=60)
       CTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATC                                                                                       >  SRR4302540.2603264/1‑94 (MQ=60)
       CTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATC                                                                                       >  SRR4302540.10107388/1‑94 (MQ=60)
        TGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCC                                                                                      >  SRR4302540.2418358/1‑94 (MQ=60)
        TGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCC                                                                                      >  SRR4302540.1985973/1‑94 (MQ=60)
        TGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCC                                                                                      >  SRR4302540.2317903/1‑94 (MQ=60)
        TGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCC                                                                                      >  SRR4302540.1899515/1‑94 (MQ=60)
        TGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCC                                                                                      <  SRR4302540.2814249/94‑1 (MQ=60)
        TGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCC                                                                                      >  SRR4302540.3189167/1‑94 (MQ=60)
         GAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCT                                                                                     >  SRR4302540.8132797/1‑94 (MQ=60)
         GAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCT                                                                                     >  SRR4302540.2425724/1‑94 (MQ=60)
          AAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTG                                                                                    <  SRR4302540.9550989/94‑1 (MQ=60)
           AACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGC                                                                                   <  SRR4302540.8024548/94‑1 (MQ=60)
           AACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGC                                                                                   >  SRR4302540.3957932/1‑94 (MQ=60)
           AACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGC                                                                                   >  SRR4302540.7854935/1‑94 (MQ=60)
            ACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCA                                                                                  <  SRR4302540.3689810/94‑1 (MQ=60)
             CATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAA                                                                                 >  SRR4302540.6887463/1‑94 (MQ=60)
             CATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAA                                                                                 >  SRR4302540.456314/1‑94 (MQ=60)
              ATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAA                                                                                >  SRR4302540.8494738/1‑94 (MQ=60)
              ATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAA                                                                                >  SRR4302540.176760/1‑94 (MQ=60)
              ATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAA                                                                                >  SRR4302540.8140708/1‑94 (MQ=60)
               TTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAA                                                                               >  SRR4302540.9913419/1‑94 (MQ=60)
               TTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAA                                                                               >  SRR4302540.7956778/1‑94 (MQ=60)
                TCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAAC                                                                              >  SRR4302540.9518116/1‑94 (MQ=60)
                 CATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACG                                                                             <  SRR4302540.5326617/94‑1 (MQ=60)
                 CATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACG                                                                             <  SRR4302540.3115592/94‑1 (MQ=60)
                 CATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACG                                                                             <  SRR4302540.8630971/94‑1 (MQ=60)
                  ATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAATATCCTGCAAAACGA                                                                            >  SRR4302540.9347425/1‑94 (MQ=60)
                  ATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAAtgt                                                                            >  SRR4302540.7998257/1‑91 (MQ=60)
                  ATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGA                                                                            <  SRR4302540.8739048/94‑1 (MQ=60)
                   TGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAT                                                                           <  SRR4302540.647370/94‑1 (MQ=60)
                   TGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAT                                                                           >  SRR4302540.1118460/1‑94 (MQ=60)
                    GATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATC                                                                          <  SRR4302540.8478804/94‑1 (MQ=60)
                    GATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATC                                                                          >  SRR4302540.7396885/1‑94 (MQ=60)
                     ATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCG                                                                         <  SRR4302540.3669776/94‑1 (MQ=60)
                     ATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCG                                                                         <  SRR4302540.8839511/94‑1 (MQ=60)
                     ATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCG                                                                         >  SRR4302540.2535432/1‑94 (MQ=60)
                      TTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGG                                                                        <  SRR4302540.4400223/94‑1 (MQ=60)
                      TTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGG                                                                        >  SRR4302540.6651686/1‑94 (MQ=60)
                       TGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGG                                                                       >  SRR4302540.3106742/1‑94 (MQ=60)
                        GTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGA                                                                      <  SRR4302540.1343133/94‑1 (MQ=60)
                        GTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGA                                                                      >  SRR4302540.6275247/1‑94 (MQ=60)
                         TTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAC                                                                     <  SRR4302540.4629545/94‑1 (MQ=60)
                         TTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAC                                                                     <  SRR4302540.8567297/94‑1 (MQ=60)
                          TGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACC                                                                    >  SRR4302540.6934242/1‑94 (MQ=60)
                          TGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACC                                                                    <  SRR4302540.407064/94‑1 (MQ=60)
                           GACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCG                                                                   >  SRR4302540.6678941/1‑94 (MQ=60)
                           GACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCG                                                                   >  SRR4302540.8575134/1‑94 (MQ=60)
                            ACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGC                                                                  >  SRR4302540.4262929/1‑94 (MQ=60)
                             CGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCG                                                                 >  SRR4302540.90755/1‑94 (MQ=60)
                             CGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCG                                                                 >  SRR4302540.4294754/1‑94 (MQ=60)
                              GTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACgcggg                                                                >  SRR4302540.438251/1‑89 (MQ=60)
                              GTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGG                                                                >  SRR4302540.154573/1‑94 (MQ=60)
                              GTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGG                                                                >  SRR4302540.222283/1‑94 (MQ=60)
                              GTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGG                                                                >  SRR4302540.1192756/1‑94 (MQ=60)
                              GTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGG                                                                >  SRR4302540.5908614/1‑94 (MQ=60)
                                ACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGAT                                                              >  SRR4302540.6146007/1‑94 (MQ=60)
                                 CGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATC                                                             >  SRR4302540.5663723/1‑94 (MQ=60)
                                 CGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATC                                                             >  SRR4302540.5799581/1‑94 (MQ=60)
                                 CGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATC                                                             <  SRR4302540.9575771/94‑1 (MQ=60)
                                  GTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCA                                                            >  SRR4302540.7644804/1‑94 (MQ=60)
                                  GTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCA                                                            >  SRR4302540.168011/1‑94 (MQ=60)
                                  GTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCA                                                            >  SRR4302540.7644802/1‑94 (MQ=60)
                                   TCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCAT                                                           <  SRR4302540.5126167/94‑1 (MQ=60)
                                   TCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCAT                                                           >  SRR4302540.3620985/1‑94 (MQ=60)
                                    CGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATA                                                          <  SRR4302540.8594972/94‑1 (MQ=60)
                                    CGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATA                                                          >  SRR4302540.5585570/1‑94 (MQ=60)
                                     GAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAG                                                         <  SRR4302540.1017891/94‑1 (MQ=60)
                                     GAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAG                                                         >  SRR4302540.9006888/1‑94 (MQ=60)
                                     GAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAG                                                         >  SRR4302540.9071869/1‑94 (MQ=60)
                                      AAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGC                                                        <  SRR4302540.4029922/94‑1 (MQ=60)
                                      AAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGC                                                        >  SRR4302540.1460160/1‑94 (MQ=60)
                                       AAAGCCCATGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCC                                                       <  SRR4302540.7394248/94‑1 (MQ=60)
                                       AAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCT                                                       >  SRR4302540.5545026/1‑94 (MQ=60)
                                       AAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCC                                                       >  SRR4302540.1786358/1‑94 (MQ=60)
                                       AAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCC                                                       >  SRR4302540.8361027/1‑94 (MQ=60)
                                       AAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCC                                                       <  SRR4302540.267214/94‑1 (MQ=60)
                                       AAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCC                                                       >  SRR4302540.7907939/1‑94 (MQ=60)
                                          GACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAA                                                    >  SRR4302540.9407001/1‑94 (MQ=60)
                                           ACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAA                                                   <  SRR4302540.4664972/94‑1 (MQ=60)
                                            CCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAC                                                  <  SRR4302540.9651723/94‑1 (MQ=60)
                                            CACTGCGTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATAGGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAC                                                  <  SRR4302540.1953441/94‑1 (MQ=60)
                                             CCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACT                                                 >  SRR4302540.627033/1‑94 (MQ=60)
                                             CCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACT                                                 >  SRR4302540.5938463/1‑94 (MQ=60)
                                              CTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTG                                                >  SRR4302540.327236/1‑94 (MQ=60)
                                              CTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTG                                                >  SRR4302540.2583556/1‑94 (MQ=60)
                                              CTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTG                                                >  SRR4302540.5019471/1‑94 (MQ=60)
                                                GCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCG                                              >  SRR4302540.7804449/1‑94 (MQ=60)
                                                 CTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGC                                             >  SRR4302540.2588080/1‑94 (MQ=60)
                                                  TTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCA                                            >  SRR4302540.37332/1‑94 (MQ=60)
                                                  TTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCA                                            <  SRR4302540.8425709/94‑1 (MQ=60)
                                                   TGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAA                                           <  SRR4302540.1790698/94‑1 (MQ=60)
                                                    GAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAG                                          <  SRR4302540.4379271/94‑1 (MQ=60)
                                                     AGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGA                                         >  SRR4302540.9246111/1‑94 (MQ=60)
                                                      GGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAG                                        <  SRR4302540.7745226/94‑1 (MQ=60)
                                                      AGGTGACGCACGAACCGCTGTCGGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAG                                        <  SRR4302540.1825061/94‑1 (MQ=60)
                                                       GGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGA                                       >  SRR4302540.9568417/1‑94 (MQ=60)
                                                        GTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAT                                      <  SRR4302540.49638/94‑1 (MQ=60)
                                                        GTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAT                                      >  SRR4302540.6474201/1‑94 (MQ=60)
                                                         TGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATC                                     >  SRR4302540.7234782/1‑94 (MQ=60)
                                                         TGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATC                                     >  SRR4302540.3189023/1‑94 (MQ=60)
                                                          GACGCACGATCCGCTGTCTGCGGTTATAGGCCCGA‑TCAAGATCCTGCAAAGCGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCT                                    <  SRR4302540.6381946/94‑1 (MQ=60)
                                                          GACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCT                                    <  SRR4302540.6381947/94‑1 (MQ=60)
                                                           ACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTT                                   >  SRR4302540.9819308/1‑94 (MQ=60)
                                                            CGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTC                                  >  SRR4302540.4856995/1‑94 (MQ=60)
                                                            CGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTC                                  <  SRR4302540.1106565/94‑1 (MQ=60)
                                                             GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCT                                 >  SRR4302540.2274095/1‑94 (MQ=60)
                                                             GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCT                                 >  SRR4302540.1590373/1‑94 (MQ=60)
                                                             GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCT                                 <  SRR4302540.7333359/94‑1 (MQ=60)
                                                             GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCT                                 >  SRR4302540.6044044/1‑94 (MQ=60)
                                                              CACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTG                                >  SRR4302540.2348174/1‑94 (MQ=60)
                                                              CACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTG                                >  SRR4302540.7673736/1‑94 (MQ=60)
                                                              CACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTG                                <  SRR4302540.8744614/94‑1 (MQ=60)
                                                               ACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGT                               >  SRR4302540.1708685/1‑94 (MQ=60)
                                                               ACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGT                               <  SRR4302540.4158683/94‑1 (MQ=60)
                                                                CGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTT                              <  SRR4302540.7247088/94‑1 (MQ=60)
                                                                CGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTT                              >  SRR4302540.2003541/1‑94 (MQ=60)
                                                                CGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTT                              >  SRR4302540.6829630/1‑94 (MQ=60)
                                                                CGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTT                              <  SRR4302540.3396016/94‑1 (MQ=60)
                                                                CGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTT                              <  SRR4302540.6554033/94‑1 (MQ=60)
                                                                 GAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTT                             >  SRR4302540.7443420/1‑94 (MQ=60)
                                                                 GAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTT                             >  SRR4302540.8068803/1‑94 (MQ=60)
                                                                  AACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTC                            <  SRR4302540.2347604/94‑1 (MQ=60)
                                                                  AACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTC                            <  SRR4302540.2567202/94‑1 (MQ=60)
                                                                   ACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCT                           >  SRR4302540.2318250/1‑94 (MQ=60)
                                                                    CCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTC                          <  SRR4302540.927205/94‑1 (MQ=60)
                                                                     CGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCA                         >  SRR4302540.4849832/1‑94 (MQ=60)
                                                                     CGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCA                         <  SRR4302540.4810810/94‑1 (MQ=60)
                                                                      GCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCAC                        >  SRR4302540.8295269/1‑94 (MQ=60)
                                                                       CTGTCTGCTGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACA                       <  SRR4302540.8394797/94‑1 (MQ=60)
                                                                       CTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACA                       <  SRR4302540.2951790/94‑1 (MQ=60)
                                                                       CTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACA                       <  SRR4302540.5009211/94‑1 (MQ=60)
                                                                       CTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACA                       <  SRR4302540.5729164/94‑1 (MQ=60)
                                                                        TGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAG                      <  SRR4302540.9859708/94‑1 (MQ=60)
                                                                         GTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGA                     <  SRR4302540.869116/94‑1 (MQ=60)
                                                                         GTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGA                     >  SRR4302540.8264110/1‑94 (MQ=60)
                                                                         GTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGA                     >  SRR4302540.9635594/1‑94 (MQ=60)
                                                                          TCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAT                    <  SRR4302540.4802361/94‑1 (MQ=60)
                                                                          TCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAT                    <  SRR4302540.640124/94‑1 (MQ=60)
                                                                          TCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAT                    <  SRR4302540.1035446/94‑1 (MQ=60)
                                                                          TCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAT                    >  SRR4302540.5443840/1‑94 (MQ=60)
                                                                           CTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATT                   >  SRR4302540.3503026/1‑94 (MQ=60)
                                                                            TGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTT                  >  SRR4302540.9247549/1‑94 (MQ=60)
                                                                            TGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTT                  <  SRR4302540.3411323/94‑1 (MQ=60)
                                                                            TGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTGCTCACAGATTT                  >  SRR4302540.2387082/1‑94 (MQ=60)
                                                                             GCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGATTCTCACAGATTTT                 <  SRR4302540.1597383/94‑1 (MQ=60)
                                                                              CGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTC                >  SRR4302540.4527315/1‑94 (MQ=60)
                                                                              CGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTC                <  SRR4302540.6391323/94‑1 (MQ=60)
                                                                              CGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTC                >  SRR4302540.9329371/1‑94 (MQ=60)
                                                                              CGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTC                <  SRR4302540.7405117/94‑1 (MQ=60)
                                                                               GGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCC               >  SRR4302540.10119153/1‑94 (MQ=60)
                                                                               GGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCC               <  SRR4302540.2159598/94‑1 (MQ=60)
                                                                               GGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCC               <  SRR4302540.3677614/94‑1 (MQ=60)
                                                                               GGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCC               >  SRR4302540.7810429/1‑94 (MQ=60)
                                                                                GTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCC              <  SRR4302540.8538603/94‑1 (MQ=60)
                                                                                GTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCC              >  SRR4302540.1083865/1‑94 (MQ=60)
                                                                                GTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCC              >  SRR4302540.3586447/1‑94 (MQ=60)
                                                                                GTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCC              <  SRR4302540.2659021/94‑1 (MQ=60)
                                                                                 TTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCG             <  SRR4302540.7486581/94‑1 (MQ=60)
                                                                                  TATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGA            >  SRR4302540.7317137/1‑94 (MQ=60)
                                                                                  TATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGA            >  SRR4302540.6356448/1‑94 (MQ=60)
                                                                                   ATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAT           >  SRR4302540.183865/1‑94 (MQ=60)
                                                                                   ATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAT           <  SRR4302540.2273480/94‑1 (MQ=60)
                                                                                   ATATGCCAGA‑TCAAGATCCTGCAAAACGATCGGGACCGCTGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAT           <  SRR4302540.6859325/94‑1 (MQ=60)
                                                                                    TATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCACAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATT          >  SRR4302540.2204149/1‑94 (MQ=60)
                                                                                     ATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTT         >  SRR4302540.2825686/1‑94 (MQ=60)
                                                                                     ATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTT         <  SRR4302540.9860719/94‑1 (MQ=60)
                                                                                       GCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTAT       <  SRR4302540.1917658/94‑1 (MQ=60)
                                                                                       GCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTAT       <  SRR4302540.4034453/94‑1 (MQ=60)
                                                                                        CCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATC      >  SRR4302540.2854424/1‑94 (MQ=60)
                                                                                        CCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATC      <  SRR4302540.7663588/94‑1 (MQ=60)
                                                                                         CCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCC     >  SRR4302540.4457710/1‑94 (MQ=60)
                                                                                         CCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCC     >  SRR4302540.4457709/1‑94 (MQ=60)
                                                                                         CCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCC     >  SRR4302540.7510964/1‑94 (MQ=60)
                                                                                         CCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCC     >  SRR4302540.6344076/1‑94 (MQ=60)
                                                                                         CCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCC     >  SRR4302540.9144123/1‑94 (MQ=60)
                                                                                         CCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCC     <  SRR4302540.6720756/94‑1 (MQ=60)
                                                                                         CCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGGTTCTCAGAGATTTTCCCGATTTATCA     >  SRR4302540.3724679/1‑94 (MQ=60)
                                                                                          CGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCA    >  SRR4302540.6232307/1‑94 (MQ=60)
                                                                                          CGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCA    <  SRR4302540.9592917/94‑1 (MQ=60)
                                                                                          CGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCA    >  SRR4302540.3773644/1‑94 (MQ=60)
                                                                                          CGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCA    >  SRR4302540.9208215/1‑94 (MQ=60)
                                                                                             ATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA  >  SRR4302540.6004369/1‑94 (MQ=60)
                                                                                             |                                                                                             
ACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA  >  NC_000913/3881390‑3881576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑