Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,883,067	T→C	D121D (GAT→GAC)	yidC →	60 KD inner‑membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,883,067	0	T	C	99.8%	1305.2 / ‑5.3	410	D121D (GAT→GAC)	yidC	60 KD inner‑membrane protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (234/175); total (235/175)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.27e-01

Only 100 of 429 total aligned reads displayed.

GAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGATAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGAT  >  NC_000913/3882977‑3883156

 aaCTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAAc                                                                                        >  1:774078/1‑93 (MQ=255)

    tctACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCg                                                                                     >  2:9711280/1‑93 (MQ=255)

    tctACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCg                                                                                     >  1:6199162/1‑93 (MQ=255)

    tctACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCg                                                                                     >  2:8432738/1‑93 (MQ=255)

     ctACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCgg                                                                                    <  2:8019416/93‑1 (MQ=255)

        cccAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTa                                                                                 >  2:3086246/1‑93 (MQ=255)

         ccAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTaa                                                                                <  2:3589166/93‑1 (MQ=255)

          cAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAAc                                                                               <  1:9393571/93‑1 (MQ=255)

          cAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAAc                                                                               <  1:757395/93‑1 (MQ=255)

          cAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAAc                                                                               >  1:5867340/1‑93 (MQ=255)

          cAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGAGGTCTGACCGGTCGTGATGGCCCGCACAACCCGGCTAAc                                                                               >  1:3359190/1‑93 (MQ=255)

            gCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACgg                                                                             >  1:9837784/1‑93 (MQ=255)

              cGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGcc                                                                           <  1:2959218/93‑1 (MQ=255)

               gTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGAGAACCCGGCTAACGGccc                                                                          >  1:8130387/1‑93 (MQ=255)

                ttCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGcccc                                                                         >  2:7284197/1‑92 (MQ=255)

                ttCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCcg                                                                         <  1:6921964/93‑1 (MQ=255)

                ttCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCcg                                                                         >  2:5665820/1‑93 (MQ=255)

                   cAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGt                                                                      >  2:1886641/1‑93 (MQ=255)

                   cAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGt                                                                      <  2:819534/93‑1 (MQ=255)

                    cgCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTc                                                                     <  2:8343010/92‑1 (MQ=255)

                    aGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTc                                                                     >  1:2887882/1‑93 (MQ=255)

                       tGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGc                                                                  <  2:9061260/93‑1 (MQ=255)

                        gTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCt                                                                 >  1:8003852/1‑93 (MQ=255)

                          tGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGt                                                               >  2:1182862/1‑93 (MQ=255)

                          tGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAAACCGGCTAACGGCCCGCGTCCGCTGt                                                               >  2:3750481/1‑93 (MQ=255)

                           ggAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGta                                                              >  2:1012709/1‑93 (MQ=255)

                           ggAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGta                                                              <  1:4244461/93‑1 (MQ=255)

                           ggAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGta                                                              >  2:2058682/1‑93 (MQ=255)

                           ggAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGta                                                              <  1:2504390/93‑1 (MQ=255)

                              aaCTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATaa                                                           <  1:3232055/93‑1 (MQ=255)

                              aaCTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATaa                                                           >  1:886616/1‑93 (MQ=255)

                               aCTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAAc                                                          <  1:307866/93‑1 (MQ=255)

                                cTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACg                                                         <  1:1923734/93‑1 (MQ=255)

                                cTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACg                                                         >  2:1769493/1‑93 (MQ=255)

                                 ttCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGt                                                        <  1:6654363/93‑1 (MQ=255)

                                 ttCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGt                                                        <  1:1385626/93‑1 (MQ=255)

                                  tCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGtt                                                       <  2:9533088/93‑1 (MQ=255)

                                  tCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGtt                                                       >  2:6343262/1‑93 (MQ=255)

                                  tCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGtt                                                       <  1:5681693/93‑1 (MQ=255)

                                  tCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGtt                                                       <  2:7728766/93‑1 (MQ=255)

                                    aCCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCCTCCGCTGTATAACGTTGa                                                     >  2:4171056/1‑93 (MQ=255)

                                     ccGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGaa                                                    >  2:470059/1‑93 (MQ=255)

                                     ccGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGaa                                                    >  2:2719099/1‑93 (MQ=255)

                                      cGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGaaa                                                   <  2:5938668/93‑1 (MQ=255)

                                      cGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGaaa                                                   >  1:3626345/1‑93 (MQ=255)

                                        cAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGaaaaa                                                 >  2:2162375/1‑93 (MQ=255)

                                         aGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAg                                                >  1:1127256/1‑93 (MQ=255)

                                         aGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAg                                                <  1:4724264/93‑1 (MQ=255)

                                          gTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGa                                               >  1:10014663/1‑93 (MQ=255)

                                          gTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGa                                               <  2:7588110/93‑1 (MQ=255)

                                          gTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGa                                               >  2:3402445/1‑93 (MQ=255)

                                          gTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGa                                               <  2:784294/93‑1 (MQ=255)

                                           tttatttaTCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGAc                                              >  1:8658642/1‑93 (MQ=255)

                                           tttatttaTCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGAc                                              >  2:5037743/1‑93 (MQ=255)

                                           tttatttaTCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGAc                                              <  1:381121/93‑1 (MQ=255)

                                           tttatttaTCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGAc                                              >  2:2926057/1‑93 (MQ=255)

                                             tatttatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACgt                                            >  2:4331058/1‑92 (MQ=255)

                                             tatttatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGc                                            >  2:3843194/1‑93 (MQ=255)

                                             tatttatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGc                                            >  2:7104226/1‑93 (MQ=255)

                                             tatttatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGc                                            <  1:5164656/93‑1 (MQ=255)

                                              atttatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCt                                           >  1:7930687/1‑93 (MQ=255)

                                              atttatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCt                                           >  1:4527944/1‑93 (MQ=255)

                                               tttatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCtt                                          >  2:113231/1‑93 (MQ=255)

                                                ttatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTa                                         <  1:4076638/93‑1 (MQ=255)

                                                 tatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTAt                                        <  1:4353747/93‑1 (MQ=255)

                                                  atCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTAtg                                       <  2:8666206/93‑1 (MQ=255)

                                                    cAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTAtgtg                                     >  2:2325187/1‑93 (MQ=255)

                                                     aGGCACAGAGCTGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATCACGTTGAAAAAGACGCTTATGTgc                                    >  2:6770239/1‑93 (MQ=255)

                                                     aGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTgc                                    <  1:7860590/93‑1 (MQ=255)

                                                      ggCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTgct                                   <  2:6831911/93‑1 (MQ=255)

                                                       gCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTgctg                                  <  1:2778295/93‑1 (MQ=255)

                                                         acaGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTTTGTgctggg                                >  2:7395728/1‑92 (MQ=255)

                                                          caGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTTTATAACGTTGAAAAAGACGCTTATGTgctggct                               >  1:9685009/1‑93 (MQ=255)

                                                           agagCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTgctggctg                              >  2:982437/1‑93 (MQ=255)

                                                           agagCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTgctggctg                              >  1:1617455/1‑93 (MQ=255)

                                                           agagCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTgctggctg                              >  2:5858905/1‑93 (MQ=255)

                                                            gagCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGa                             >  2:6154932/1‑93 (MQ=255)

                                                            gagCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGa                             >  1:9021898/1‑93 (MQ=255)

                                                                    tGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGGAGGTCaaa                     >  2:8876247/1‑93 (MQ=255)

                                                                         ggTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGaa                <  2:5473011/93‑1 (MQ=255)

                                                                         ggTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGaa                >  1:1485845/1‑93 (MQ=255)

                                                                         ggTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGaa                <  1:1196159/93‑1 (MQ=255)

                                                                         ggTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGaa                >  1:8783058/1‑93 (MQ=255)

                                                                          gTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAAAGAAc               >  2:3061594/1‑93 (MQ=255)

                                                                           tCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACt              >  1:1302163/1‑93 (MQ=255)

                                                                             gTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTTCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGGCAAAAAGAACTGc            >  2:1420008/1‑93 (MQ=255)

                                                                             gTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAATGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGc            <  2:6005907/93‑1 (MQ=255)

                                                                             gTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGc            <  1:8475864/93‑1 (MQ=255)

                                                                             gTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGc            >  2:5271247/1‑93 (MQ=255)

                                                                              tGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCa           >  1:2340025/1‑93 (MQ=255)

                                                                              tGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCa           >  1:2227362/1‑93 (MQ=255)

                                                                               gATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAg          <  1:6298730/93‑1 (MQ=255)

                                                                                aTGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAgg         <  2:286492/93‑1 (MQ=255)

                                                                                 tGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGt        <  1:7142801/93‑1 (MQ=255)

                                                                                  ggCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTg       <  1:6119727/93‑1 (MQ=255)

                                                                                     ccGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGGGCCg    >  2:2566340/1‑93 (MQ=255)

                                                                                      cGGATAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGa   >  2:9208178/1‑93 (MQ=255)

                                                                                      cGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGa   >  1:3185932/1‑93 (MQ=255)

                                                                                      cGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGa   >  1:3918919/1‑93 (MQ=255)

                                                                                       ggACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGAt  <  2:1661811/93‑1 (MQ=255)

GAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGATAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGAT  >  NC_000913/3882977‑3883156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 224 total aligned reads displayed.

GCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGATAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGATGAC  >  NC_000913/3882974‑3883159

 CTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACA                                                                                             >  SRR4302540.7728383/1‑94 (MQ=60)

 CTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACA                                                                                             >  SRR4302540.3622536/1‑94 (MQ=60)

 CTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGCTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACA                                                                                             >  SRR4302540.2058758/1‑94 (MQ=60)

  TGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAA                                                                                            >  SRR4302540.2125976/1‑94 (MQ=60)

   GAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAAC                                                                                           <  SRR4302540.3371700/94‑1 (MQ=60)

   GAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAAC                                                                                           <  SRR4302540.7757575/94‑1 (MQ=60)

   GAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAAC                                                                                           >  SRR4302540.4243616/1‑94 (MQ=60)

    GACTCTACCCAGCTGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACC                                                                                          <  SRR4302540.7880808/94‑1 (MQ=60)

     ACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCC                                                                                         <  SRR4302540.3199365/94‑1 (MQ=60)

      CTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACACCCCG                                                                                        >  SRR4302540.2422785/1‑94 (MQ=60)

      CTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACGCG                                                                                        >  SRR4302540.1360436/1‑94 (MQ=60)

      CTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCG                                                                                        >  SRR4302540.5373477/1‑94 (MQ=60)

      CTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCG                                                                                        >  SRR4302540.461783/1‑94 (MQ=60)

      CTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCG                                                                                        >  SRR4302540.6268169/1‑94 (MQ=60)

      CTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCG                                                                                        >  SRR4302540.993970/1‑94 (MQ=60)

        CTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGTCCCGGACAACCCGGC                                                                                      >  SRR4302540.9746107/1‑94 (MQ=60)

          ACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTA                                                                                    >  SRR4302540.633266/1‑94 (MQ=60)

          ACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTA                                                                                    >  SRR4302540.9900314/1‑94 (MQ=60)

          ACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTA                                                                                    >  SRR4302540.6962523/1‑94 (MQ=60)

          ACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTA                                                                                    >  SRR4302540.3144437/1‑94 (MQ=60)

           CCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAA                                                                                   >  SRR4302540.602321/1‑94 (MQ=60)

           CCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAA                                                                                   >  SRR4302540.300578/1‑94 (MQ=60)

           CCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGAACAGAGCGGTCTGACCGGTCGTGATGGCCGGGACAACCCGGCTAC                                                                                   >  SRR4302540.922304/1‑94 (MQ=60)

            CCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAAC                                                                                  >  SRR4302540.1251772/1‑94 (MQ=60)

            CCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAAC                                                                                  >  SRR4302540.3748776/1‑94 (MQ=60)

            CCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAAC                                                                                  <  SRR4302540.4183362/94‑1 (MQ=60)

            CCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAAC                                                                                  <  SRR4302540.2944813/94‑1 (MQ=60)

            CCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAAC                                                                                  <  SRR4302540.4885129/94‑1 (MQ=60)

            CCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGAGGTCTGACCGGTCGTGATGGCCCGCACAACCCGGCTAAC                                                                                  >  SRR4302540.3395974/1‑94 (MQ=60)

             CAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACG                                                                                 <  SRR4302540.9505351/94‑1 (MQ=60)

             CAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACG                                                                                 <  SRR4302540.765458/94‑1 (MQ=60)

              AGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGG                                                                                >  SRR4302540.9952815/1‑94 (MQ=60)

              AGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGG                                                                                >  SRR4302540.1263454/1‑94 (MQ=60)

                 CGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGAGAACCCGGCTAACGGCCC                                                                             >  SRR4302540.8224758/1‑94 (MQ=60)

                 CGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCC                                                                             <  SRR4302540.7984677/94‑1 (MQ=60)

                 CGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCC                                                                             <  SRR4302540.901066/94‑1 (MQ=60)

                 CGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCC                                                                             <  SRR4302540.5101714/94‑1 (MQ=60)

                 CGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCC                                                                             <  SRR4302540.2991833/94‑1 (MQ=60)

                  GTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACTGCCCG                                                                            >  SRR4302540.2322303/1‑94 (MQ=60)

                  GTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCG                                                                            >  SRR4302540.1570893/1‑94 (MQ=60)

                  GTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCG                                                                            >  SRR4302540.4677117/1‑94 (MQ=60)

                   TTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGC                                                                           <  SRR4302540.6998991/94‑1 (MQ=60)

                    TCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCG                                                                          <  SRR4302540.7900920/94‑1 (MQ=60)

                     CCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGT                                                                         >  SRR4302540.8957998/1‑94 (MQ=60)

                      CAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTC                                                                        >  SRR4302540.2919335/1‑94 (MQ=60)

                      CAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGCCCCGGACAACCCGGCTAACGGCCCGCGTC                                                                        >  SRR4302540.2919336/1‑94 (MQ=60)

                       AGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACTCGGCTAACGGCCCGCGTCC                                                                       >  SRR4302540.9893555/1‑94 (MQ=60)

                       AGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAAACCGGCTAACGGCCCGCCTCC                                                                       >  SRR4302540.1379434/1‑94 (MQ=60)

                        GCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCG                                                                      <  SRR4302540.4476049/94‑1 (MQ=60)

                         CTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGC                                                                     >  SRR4302540.3381306/1‑94 (MQ=60)

                         CTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGC                                                                     <  SRR4302540.3709192/94‑1 (MQ=60)

                          TGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCT                                                                    >  SRR4302540.8096998/1‑94 (MQ=60)

                          TGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCT                                                                    <  SRR4302540.7966012/94‑1 (MQ=60)

                           GTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTG                                                                   <  SRR4302540.321808/94‑1 (MQ=60)

                            TTGGAAACTTCACCGCAGCTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGT                                                                  >  SRR4302540.9265812/1‑94 (MQ=60)

                              TGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTAT                                                                <  SRR4302540.5803055/94‑1 (MQ=60)

                              GGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTAT                                                                >  SRR4302540.1463902/1‑94 (MQ=60)

                              GGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTAT                                                                <  SRR4302540.4290642/94‑1 (MQ=60)

                               GAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATA                                                               <  SRR4302540.6206602/94‑1 (MQ=60)

                               GAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATA                                                               >  SRR4302540.26117/1‑94 (MQ=60)

                                AAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAA                                                              <  SRR4302540.1199848/94‑1 (MQ=60)

                                AAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAA                                                              >  SRR4302540.896026/1‑94 (MQ=60)

                                AAACTTCACCGCAGTTTATATATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACACCCCGGCTAACGGCCCGCGTCCGCTGTATAA                                                              <  SRR4302540.1199849/94‑1 (MQ=60)

                                 AACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAAC                                                             <  SRR4302540.6538531/94‑1 (MQ=60)

                                 AACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAAC                                                             >  SRR4302540.6252269/1‑94 (MQ=60)

                                 AACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAAC                                                             >  SRR4302540.6252268/1‑94 (MQ=60)

                                 AACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAAC                                                             <  SRR4302540.8678589/94‑1 (MQ=60)

                                 AACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAAC                                                             <  SRR4302540.3267199/94‑1 (MQ=60)

                                 AACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACCGCCCGCGTCCGCTGTATAAC                                                             >  SRR4302540.4021738/1‑94 (MQ=60)

                                  ACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACG                                                            >  SRR4302540.4354016/1‑94 (MQ=60)

                                  ACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACG                                                            <  SRR4302540.1452728/94‑1 (MQ=60)

                                   CTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGT                                                           >  SRR4302540.8951768/1‑94 (MQ=60)

                                   CTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGT                                                           <  SRR4302540.1944707/94‑1 (MQ=60)

                                    TTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTT                                                          <  SRR4302540.6727963/94‑1 (MQ=60)

                                     TCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTG                                                         <  SRR4302540.5744243/94‑1 (MQ=60)

                                      CACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGA                                                        >  SRR4302540.2427318/1‑94 (MQ=60)

                                      CACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGA                                                        >  SRR4302540.193675/1‑94 (MQ=60)

                                       ACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAATGTTGAA                                                       >  SRR4302540.1608217/1‑94 (MQ=60)

                                       ACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAA                                                       <  SRR4302540.4530485/94‑1 (MQ=60)

                                       ACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAA                                                       >  SRR4302540.7668410/1‑94 (MQ=60)

                                        CCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAA                                                      >  SRR4302540.3666033/1‑94 (MQ=60)

                                         CGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAA                                                     >  SRR4302540.7613052/1‑94 (MQ=60)

                                         CGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGCTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAA                                                     >  SRR4302540.3555537/1‑94 (MQ=60)

                                          GCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAA                                                    >  SRR4302540.5814012/1‑94 (MQ=60)

                                           CAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAG                                                   >  SRR4302540.1138985/1‑94 (MQ=60)

                                           CAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAG                                                   <  SRR4302540.4837064/94‑1 (MQ=60)

                                            AGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGA                                                  >  SRR4302540.3770007/1‑94 (MQ=60)

                                            AGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGA                                                  <  SRR4302540.4774725/94‑1 (MQ=60)

                                            AGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGA                                                  >  SRR4302540.971000/1‑94 (MQ=60)

                                            AGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGA                                                  >  SRR4302540.10131248/1‑94 (MQ=60)

                                            AGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGA                                                  >  SRR4302540.2350456/1‑94 (MQ=60)

                                             GTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGAC                                                 >  SRR4302540.3019064/1‑94 (MQ=60)

                                             GTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGAC                                                 <  SRR4302540.237060/94‑1 (MQ=60)

                                             GTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGAC                                                 <  SRR4302540.5969634/94‑1 (MQ=60)

                                             GTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGAC                                                 >  SRR4302540.8759224/1‑94 (MQ=60)

                                             GTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGAC                                                 <  SRR4302540.7419850/94‑1 (MQ=60)

                                             GTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCAGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGAC                                                 <  SRR4302540.5969632/94‑1 (MQ=60)

                                              TTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACG                                                >  SRR4302540.1403621/1‑94 (MQ=60)

                                              TTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACG                                                <  SRR4302540.385063/94‑1 (MQ=60)

                                              TTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACG                                                >  SRR4302540.3225305/1‑94 (MQ=60)

                                               TTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGC                                               >  SRR4302540.6345383/1‑94 (MQ=60)

                                               TTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGC                                               >  SRR4302540.8279728/1‑94 (MQ=60)

                                               TTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGC                                               >  SRR4302540.3900039/1‑94 (MQ=60)

                                               TTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGC                                               >  SRR4302540.1546382/1‑94 (MQ=60)

                                                TATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCT                                              <  SRR4302540.5220818/94‑1 (MQ=60)

                                                TATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCT                                              >  SRR4302540.4576966/1‑94 (MQ=60)

                                                TATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCT                                              >  SRR4302540.8023126/1‑94 (MQ=60)

                                                 ATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGGCCGAGTCCGCTGTATAACGTTGAAAAAGACGCTT                                             >  SRR4302540.9927077/1‑94 (MQ=60)

                                                 ATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTT                                             <  SRR4302540.7143375/94‑1 (MQ=60)

                                                   TTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTAT                                           <  SRR4302540.4120584/94‑1 (MQ=60)

                                                    TATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATG                                          >  SRR4302540.10138817/1‑94 (MQ=60)

                                                    TATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATG                                          >  SRR4302540.1685590/1‑94 (MQ=60)

                                                    TATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATG                                          <  SRR4302540.4401102/94‑1 (MQ=60)

                                                     ATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGT                                         <  SRR4302540.1111784/94‑1 (MQ=60)

                                                      TCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTG                                        <  SRR4302540.2547692/94‑1 (MQ=60)

                                                      TCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTG                                        <  SRR4302540.7975029/94‑1 (MQ=60)

                                                      TCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTG                                        <  SRR4302540.7975028/94‑1 (MQ=60)

                                                       CAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGC                                       <  SRR4302540.6943661/94‑1 (MQ=60)

                                                       CAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGC                                       <  SRR4302540.5616061/94‑1 (MQ=60)

                                                        AGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCT                                      <  SRR4302540.7952436/94‑1 (MQ=60)

                                                        AGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCT                                      <  SRR4302540.8624796/94‑1 (MQ=60)

                                                        AGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCT                                      <  SRR4302540.6947930/94‑1 (MQ=60)

                                                        AGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCT                                      >  SRR4302540.9081997/1‑94 (MQ=60)

                                                        AGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCT                                      <  SRR4302540.1184854/94‑1 (MQ=60)

                                                         GGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTG                                     >  SRR4302540.3243666/1‑94 (MQ=60)

                                                          GCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGG                                    <  SRR4302540.2808320/94‑1 (MQ=60)

                                                          GCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGG                                    <  SRR4302540.2808319/94‑1 (MQ=60)

                                                           CACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAAGGTTGAAAAAGACGCTTATGTGCTGGC                                   >  SRR4302540.5597582/1‑94 (MQ=60)

                                                            ACAGAGTGGTCTGACAGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCT                                  <  SRR4302540.9003482/94‑1 (MQ=60)

                                                            ACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTTTATAACGTTGAAAAAGACGCTTATGTGCTGGCT                                  >  SRR4302540.9798949/1‑94 (MQ=60)

                                                            ACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCT                                  >  SRR4302540.1363540/1‑94 (MQ=60)

                                                            ACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCT                                  >  SRR4302540.2683158/1‑94 (MQ=60)

                                                            ACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGGGCTTGCT                                  >  SRR4302540.8539693/1‑94 (MQ=60)

                                                             CAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTG                                 >  SRR4302540.1635192/1‑94 (MQ=60)

                                                             CAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTG                                 <  SRR4302540.3128167/94‑1 (MQ=60)

                                                             CAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTG                                 >  SRR4302540.2825766/1‑94 (MQ=60)

                                                              AGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGCAAAAGAAGCTTATGTGCTGGCTGA                                >  SRR4302540.7565978/1‑94 (MQ=60)

                                                              AGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGA                                <  SRR4302540.66987/94‑1 (MQ=60)

                                                              AGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGA                                <  SRR4302540.66986/94‑1 (MQ=60)

                                                              AGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGA                                >  SRR4302540.9130156/1‑94 (MQ=60)

                                                              AGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGA                                >  SRR4302540.3890224/1‑94 (MQ=60)

                                                              AGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGA                                <  SRR4302540.7116392/94‑1 (MQ=60)

                                                               GAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAA                               <  SRR4302540.8902072/94‑1 (MQ=60)

                                                                acccgtcgggCCGGTCGTGATGTCCCCGACAGCCCGGCTAACGCCCCGCGTCCGCGGTGTAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAG                              <  SRR4302540.2180909/84‑1 (MQ=58)

                                                                 GCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGACGG                             >  SRR4302540.1369725/1‑94 (MQ=60)

                                                                 GCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGG                             <  SRR4302540.5858524/94‑1 (MQ=60)

                                                                   GGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTC                           <  SRR4302540.7020292/94‑1 (MQ=60)

                                                                    GTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCA                          >  SRR4302540.783282/1‑94 (MQ=60)

                                                                     TCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAA                         <  SRR4302540.2827586/94‑1 (MQ=60)

                                                                      CTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTAAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAA                        >  SRR4302540.9802003/1‑94 (MQ=60)

                                                                      CTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCGGTATAACGTTGAAAAAGACGCTGATGTGCGGGCTGAAGGTCAAA                        >  SRR4302540.2106094/1‑94 (MQ=60)

                                                                       TGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAA                       >  SRR4302540.8762391/1‑94 (MQ=60)

                                                                        GACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAAC                      <  SRR4302540.4105314/94‑1 (MQ=60)

                                                                        GACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAAC                      <  SRR4302540.1819948/94‑1 (MQ=60)

                                                                         ACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAcaca                     >  SRR4302540.8074864/1‑90 (MQ=60)

                                                                         ACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAACACG                     >  SRR4302540.8074863/1‑94 (MQ=60)

                                                                         ACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACG                     <  SRR4302540.9239069/94‑1 (MQ=60)

                                                                          CCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGA                    <  SRR4302540.4389620/94‑1 (MQ=60)

                                                                           CGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAA                   >  SRR4302540.8884727/1‑94 (MQ=60)

                                                                           CGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAA                   >  SRR4302540.1502158/1‑94 (MQ=60)

                                                                            GGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAAC                  >  SRR4302540.8700557/1‑94 (MQ=60)

                                                                            GGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAAC                  >  SRR4302540.4043128/1‑94 (MQ=60)

                                                                            GGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAAC                  >  SRR4302540.1064462/1‑94 (MQ=60)

                                                                            GGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAAC                  >  SRR4302540.8125222/1‑94 (MQ=60)

                                                                            GGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAAC                  <  SRR4302540.6671458/94‑1 (MQ=60)

                                                                            GGTCGTGATGCCCCGGACAACCCTGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAAC                  <  SRR4302540.2295003/94‑1 (MQ=60)

                                                                             GTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACT                 <  SRR4302540.8183145/94‑1 (MQ=60)

                                                                             GTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACT                 <  SRR4302540.8837498/94‑1 (MQ=60)

                                                                             GTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACT                 >  SRR4302540.1315665/1‑94 (MQ=60)

                                                                             GTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGCCAAAACGAACG                 >  SRR4302540.1315333/1‑94 (MQ=60)

                                                                               CGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGC               <  SRR4302540.5871531/94‑1 (MQ=60)

                                                                               CGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGC               >  SRR4302540.3086660/1‑94 (MQ=60)

                                                                               CGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGC               >  SRR4302540.8635403/1‑94 (MQ=60)

                                                                               CGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGC               >  SRR4302540.4592298/1‑94 (MQ=60)

                                                                                GTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCA              <  SRR4302540.8574307/94‑1 (MQ=60)

                                                                                GTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCA              <  SRR4302540.3505127/94‑1 (MQ=60)

                                                                                GTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCA              <  SRR4302540.3941667/94‑1 (MQ=60)

                                                                                GTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCA              >  SRR4302540.2365240/1‑94 (MQ=60)

                                                                                GTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCA              >  SRR4302540.2251358/1‑94 (MQ=60)

                                                                                 TGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAG             <  SRR4302540.3024071/94‑1 (MQ=60)

                                                                                 TGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAG             <  SRR4302540.330928/94‑1 (MQ=60)

                                                                                  GATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGG            <  SRR4302540.6368873/94‑1 (MQ=60)

                                                                                    TGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTG          <  SRR4302540.2980213/94‑1 (MQ=60)

                                                                                    TGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTG          <  SRR4302540.7222382/94‑1 (MQ=60)

                                                                                    TGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTG          <  SRR4302540.9585396/94‑1 (MQ=60)

                                                                                    CGGCCCGGACAACCCGACTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTG          <  SRR4302540.7801289/94‑1 (MQ=60)

                                                                                     GGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGC         <  SRR4302540.6187883/94‑1 (MQ=60)

                                                                                     GGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGC         <  SRR4302540.4180358/94‑1 (MQ=60)

                                                                                      GCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCC        >  SRR4302540.1837584/1‑94 (MQ=60)

                                                                                       CCCGGACAACCCGGCTAACGGCTCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCGGAAGGTCAAAACGAACTGCAGGTGCCG       <  SRR4302540.4481840/94‑1 (MQ=60)

                                                                                       CCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCG       >  SRR4302540.8221787/1‑94 (MQ=60)

                                                                                        CCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGA      >  SRR4302540.3961345/1‑94 (MQ=60)

                                                                                        CCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGA      >  SRR4302540.3220546/1‑94 (MQ=60)

                                                                                         CGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGAT     >  SRR4302540.10055870/1‑94 (MQ=60)

                                                                                          GGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGATG    <  SRR4302540.3495514/94‑1 (MQ=60)

                                                                                          GGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGATG    >  SRR4302540.8976492/1‑94 (MQ=60)

                                                                                           GACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGATGA   >  SRR4302540.5233642/1‑94 (MQ=60)

                                                                                           GACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGATGA   >  SRR4302540.5233643/1‑94 (MQ=60)

                                                                                            ACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGATGAC  <  SRR4302540.2546608/94‑1 (MQ=60)

                                                                                            ACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGATGAC  >  SRR4302540.6664442/1‑94 (MQ=60)

GCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGATAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGATGAC  >  NC_000913/3882974‑3883159

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`