Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,886,722 G→A G122S (GGC→AGC)  b3708 → tryptophanase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,886,7220GA99.7% 2091.9 / ‑6.1 574G122S (GGC→AGC) b3708tryptophanase
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base A (300/269);  total (302/272)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.41e-01

Only 100 of 590 total aligned reads displayed.

GGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAGGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGT  >  NC_000913/3886632‑3886811
                                                                                          |                                                                                         
ggTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGc                                                                                         <  1:5619830/93‑1 (MQ=255)
 gTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGcc                                                                                        <  2:9744674/93‑1 (MQ=255)
  ttATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCt                                                                                       >  2:2609738/1‑93 (MQ=255)
  ttATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCt                                                                                       >  2:5761065/1‑93 (MQ=255)
   tATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTg                                                                                      >  2:128666/1‑93 (MQ=255)
   tATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTg                                                                                      >  2:4437677/1‑93 (MQ=255)
   tATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTg                                                                                      <  2:5060190/93‑1 (MQ=255)
    aTCAATACACCATTCCGACTCACCACGGCCGTGGCGCAGAGCAAATCTATATTCCGGGACGGATTAAAAAACGCGAGCAGGAAAAACGCCTgg                                                                                     >  1:7572499/1‑93 (MQ=255)
     tCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGa                                                                                    >  1:3970034/1‑93 (MQ=255)
     tCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGa                                                                                    <  2:7890785/93‑1 (MQ=255)
        aTACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCg                                                                                 >  1:2111794/1‑93 (MQ=255)
         tccacCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCgc                                                                                <  2:8301914/91‑1 (MQ=255)
           cacCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCgcag                                                                              >  1:304673/1‑93 (MQ=255)
           cacCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCgcag                                                                              >  1:3647691/1‑93 (MQ=255)
            cccATGCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGAGTAAAAAACGCTAGCAGGAAAAAAGCCTGGATCgcagc                                                                             <  2:8573358/92‑1 (MQ=255)
            acCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCgcagc                                                                             <  2:6770073/93‑1 (MQ=255)
            acCATCCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCgcagc                                                                             <  1:1940692/93‑1 (MQ=255)
             ccATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCgcagca                                                                            >  1:3218522/1‑93 (MQ=255)
             ccATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCgcagca                                                                            >  2:7212777/1‑93 (MQ=255)
                ttCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCaaaa                                                                         >  2:2946898/1‑93 (MQ=255)
                ttCCGACTAACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCaaaa                                                                         >  2:939105/1‑93 (MQ=255)
                 tCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAt                                                                        <  1:7389369/93‑1 (MQ=255)
                 tCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAt                                                                        >  2:1559084/1‑93 (MQ=255)
                  ccGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtg                                                                       <  1:836472/93‑1 (MQ=255)
                   cGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtgg                                                                      <  1:4955683/93‑1 (MQ=255)
                    gACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtggg                                                                     >  2:2210009/1‑92 (MQ=255)
                     aCTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtggtg                                                                    <  2:6474092/93‑1 (MQ=255)
                     aCTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtggtg                                                                    <  1:5145871/93‑1 (MQ=255)
                     aCTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtggtg                                                                    <  2:7556719/93‑1 (MQ=255)
                     aCTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAtggtg                                                                    <  2:4635223/93‑1 (MQ=255)
                       tCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGc                                                                  >  1:8061564/1‑93 (MQ=255)
                        cACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCg                                                                 >  1:1721923/1‑93 (MQ=255)
                         aCCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGt                                                                <  2:3118950/93‑1 (MQ=255)
                          ccAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGtt                                                               >  1:9062601/1‑93 (MQ=255)
                          ccAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGtt                                                               >  1:7934112/1‑93 (MQ=255)
                             gggCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTtctc                                                            <  1:2453783/93‑1 (MQ=255)
                              ggCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTctct                                                           <  1:7245328/93‑1 (MQ=255)
                              ggCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTctct                                                           >  1:2764066/1‑93 (MQ=255)
                              ggCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTctct                                                           >  1:8205138/1‑93 (MQ=255)
                               gCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTa                                                          <  1:9801370/93‑1 (MQ=255)
                                ccGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTaa                                                         >  2:7416915/1‑93 (MQ=255)
                                 cGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTCAc                                                        >  1:1020933/1‑93 (MQ=255)
                                 cGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAAc                                                        <  1:6514170/93‑1 (MQ=255)
                                 cGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAAc                                                        >  2:2448211/1‑93 (MQ=255)
                                 cGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAAc                                                        >  2:4904064/1‑93 (MQ=255)
                                 cGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAAc                                                        <  2:7619583/93‑1 (MQ=255)
                                     gcgcAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAACTGGTGGCGTTCTCTAACTAtt                                                    <  1:1834819/93‑1 (MQ=255)
                                     gcgcAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTAtt                                                    <  2:8815295/93‑1 (MQ=255)
                                       gcAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTc                                                  <  1:1078292/93‑1 (MQ=255)
                                         agagCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCtt                                                >  2:4189346/1‑93 (MQ=255)
                                         agagCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCtt                                                <  2:9036987/93‑1 (MQ=255)
                                          gagCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCttt                                               >  1:9542434/1‑93 (MQ=255)
                                            gCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGa                                             >  1:5808356/1‑93 (MQ=255)
                                            gCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGa                                             >  1:626474/1‑93 (MQ=255)
                                              aaaTCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATa                                           >  1:4861429/1‑93 (MQ=255)
                                              aaaTCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATa                                           >  2:3697735/1‑93 (MQ=255)
                                              aaaTCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGAATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATa                                           <  2:1037593/93‑1 (MQ=255)
                                                aTCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATAcc                                         >  2:5887875/1‑93 (MQ=255)
                                                aTCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGGTCTCTAACTATTTCTTTGATAcc                                         >  2:5610752/1‑93 (MQ=255)
                                                 tgtataTTACGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCa                                        <  1:8852670/91‑1 (MQ=255)
                                                 tCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCa                                        <  1:14530/93‑1 (MQ=255)
                                                 tCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCa                                        >  1:3436646/1‑93 (MQ=255)
                                                  cTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCAc                                       >  1:5710619/1‑93 (MQ=255)
                                                  cTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCAc                                       <  1:5545676/93‑1 (MQ=255)
                                                  cTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCAc                                       <  1:9977792/93‑1 (MQ=255)
                                                    atatTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGc                                     <  1:7127604/93‑1 (MQ=255)
                                                     tatTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCa                                    <  1:9307461/93‑1 (MQ=255)
                                                     tatTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCa                                    <  2:8680402/93‑1 (MQ=255)
                                                     tatTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCa                                    <  2:9646045/93‑1 (MQ=255)
                                                       ttCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAgg                                  <  1:8723491/93‑1 (MQ=255)
                                                        tCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAggg                                 >  1:8526582/1‑93 (MQ=255)
                                                        tCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAggg                                 >  1:5898039/1‑93 (MQ=255)
                                                         ccGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGc                                >  1:3757116/1‑93 (MQ=255)
                                                          cGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGcc                               >  2:4313452/1‑93 (MQ=255)
                                                          cGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGcc                               >  1:9386183/1‑93 (MQ=255)
                                                           ggTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCa                              >  1:4438775/1‑93 (MQ=255)
                                                            gTACTGATTAAAAACCGCGAGCATGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCAt                             <  2:5531601/93‑1 (MQ=255)
                                                             gaCTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATa                            <  2:8234520/92‑1 (MQ=255)
                                                              aCTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAg                           >  1:6738812/1‑93 (MQ=255)
                                                               cTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGc                          <  2:3497677/93‑1 (MQ=255)
                                                               cTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGc                          <  1:2637483/93‑1 (MQ=255)
                                                                tGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGcc                         >  2:3886761/1‑93 (MQ=255)
                                                                 gATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCa                        >  1:1286110/1‑93 (MQ=255)
                                                                 gATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCa                        <  1:4101829/93‑1 (MQ=255)
                                                                       aaaaCGCGAGCAGGAAAAAAGGCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCaa                  <  1:768898/93‑1 (MQ=255)
                                                                       aaaaCGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCaa                  <  2:6638220/93‑1 (MQ=255)
                                                                       aaaaCGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCaa                  <  1:2557935/93‑1 (MQ=255)
                                                                        aaaCGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAAc                 >  1:6060176/1‑93 (MQ=255)
                                                                        aaaCGCAAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAAc                 <  2:527170/93‑1 (MQ=255)
                                                                         aaCGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACg                >  2:6222684/1‑93 (MQ=255)
                                                                         aaCGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACg                >  1:6900476/1‑93 (MQ=255)
                                                                         aaCGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACg                <  2:7033101/93‑1 (MQ=255)
                                                                           cgcgAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGc              >  2:9478331/1‑93 (MQ=255)
                                                                            gcgAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCt             <  1:5401090/93‑1 (MQ=255)
                                                                             cgAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTg            <  2:8373690/93‑1 (MQ=255)
                                                                                  aGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCg       >  2:8104026/1‑93 (MQ=255)
                                                                                   ggAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGt      >  1:6582858/1‑93 (MQ=255)
                                                                                   ggAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGt      >  2:1920783/1‑93 (MQ=255)
                                                                                       aaaaGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTGTTTGATACCAGGCAGGGCGCTAGCCAGATAAACGGCTGTAgcgtgcgt  >  1:4282425/1‑93 (MQ=255)
                                                                                       aaaaGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGt  >  2:3373618/1‑93 (MQ=255)
                                                                                          |                                                                                         
GGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAGGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGT  >  NC_000913/3886632‑3886811

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 340 total aligned reads displayed.
TTTGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAGGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAACG  >  NC_000913/3886629‑3886815
                                                                                             |                                                                                             
TTTGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAA                                                                                               <  SRR4302540.1899316/94‑1 (MQ=60)
TTTGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAA                                                                                               <  SRR4302540.9009570/94‑1 (MQ=60)
 TTGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAG                                                                                              >  SRR4302540.2175856/1‑94 (MQ=60)
 TTGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAG                                                                                              >  SRR4302540.6756020/1‑94 (MQ=60)
 TTGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAG                                                                                              >  SRR4302540.7944535/1‑94 (MQ=60)
  TGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGC                                                                                             <  SRR4302540.9968951/94‑1 (MQ=60)
    GTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCT                                                                                           >  SRR4302540.3747629/1‑94 (MQ=60)
     TTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCTGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTG                                                                                          <  SRR4302540.7292680/94‑1 (MQ=60)
     TTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTG                                                                                          >  SRR4302540.3050506/1‑94 (MQ=60)
      TATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGG                                                                                         >  SRR4302540.10103910/1‑94 (MQ=60)
       ATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGA                                                                                        <  SRR4302540.4955062/94‑1 (MQ=60)
       ATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGA                                                                                        <  SRR4302540.7041690/94‑1 (MQ=60)
       ATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGA                                                                                        >  SRR4302540.7425393/1‑94 (MQ=60)
       ATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGA                                                                                        >  SRR4302540.8657422/1‑94 (MQ=60)
       ATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGA                                                                                        >  SRR4302540.1268685/1‑94 (MQ=60)
       ATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGA                                                                                        >  SRR4302540.4012830/1‑94 (MQ=60)
        TCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGAT                                                                                       >  SRR4302540.2400318/1‑94 (MQ=60)
         CAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATC                                                                                      >  SRR4302540.6353527/1‑94 (MQ=60)
         CAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATC                                                                                      <  SRR4302540.9467394/94‑1 (MQ=60)
         CAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATC                                                                                      >  SRR4302540.1074703/1‑94 (MQ=60)
         CAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATC                                                                                      >  SRR4302540.1949138/1‑94 (MQ=60)
         CAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATC                                                                                      >  SRR4302540.7259502/1‑94 (MQ=60)
          AATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCG                                                                                     >  SRR4302540.2134455/1‑94 (MQ=60)
          AATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCG                                                                                     >  SRR4302540.5325667/1‑94 (MQ=60)
          AATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCG                                                                                     <  SRR4302540.133492/94‑1 (MQ=60)
          AATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCG                                                                                     >  SRR4302540.7258634/1‑94 (MQ=60)
              CACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCCAATCTATATTCCGGCACTGATTAAAAAACGCGAGCAGGCAACAAGCCTGGATCGCAGC                                                                                 >  SRR4302540.54893/1‑94 (MQ=60)
               ACCATTCCGACTCATCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCA                                                                                >  SRR4302540.8460600/1‑94 (MQ=60)
               ACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCA                                                                                >  SRR4302540.3253487/1‑94 (MQ=60)
               ACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCA                                                                                <  SRR4302540.9210305/94‑1 (MQ=60)
               ACCATCCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCA                                                                                <  SRR4302540.1961827/94‑1 (MQ=60)
                CCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATTTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAA                                                                               >  SRR4302540.2658012/1‑94 (MQ=60)
                  ATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAACAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAA                                                                             >  SRR4302540.6996020/1‑94 (MQ=60)
                  ATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGctcggaggaaag                                                                             >  SRR4302540.8534635/1‑82 (MQ=60)
                  ATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAA                                                                             <  SRR4302540.4336844/94‑1 (MQ=60)
                   ATCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAT                                                                            <  SRR4302540.7784676/94‑1 (MQ=60)
                   ATCCGACTCACCAGGGCCGTGCCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAAT                                                                            <  SRR4302540.8135857/94‑1 (MQ=60)
                    TCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATG                                                                           <  SRR4302540.7471700/94‑1 (MQ=60)
                     CCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGG                                                                          >  SRR4302540.7339210/1‑94 (MQ=60)
                     CCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGG                                                                          <  SRR4302540.9780348/94‑1 (MQ=60)
                     CCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGG                                                                          <  SRR4302540.3167847/94‑1 (MQ=60)
                     CCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGG                                                                          >  SRR4302540.9302474/1‑94 (MQ=60)
                     CCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGG                                                                          <  SRR4302540.845358/94‑1 (MQ=60)
                     CCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGG                                                                          >  SRR4302540.5166924/1‑94 (MQ=60)
                     CCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGG                                                                          <  SRR4302540.658859/94‑1 (MQ=60)
                     CCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGG                                                                          >  SRR4302540.2448132/1‑94 (MQ=60)
                      CGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGT                                                                         <  SRR4302540.5009242/94‑1 (MQ=60)
                      CGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGT                                                                         <  SRR4302540.5009236/94‑1 (MQ=60)
                      CGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGT                                                                         <  SRR4302540.4514240/94‑1 (MQ=60)
                      CGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGG                                                                         >  SRR4302540.8178222/1‑94 (MQ=60)
                       GACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGTAGGAAAAAAGCCTGGATCGCAGCAAAATGGTG                                                                        >  SRR4302540.9911935/1‑94 (MQ=60)
                       GACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTG                                                                        >  SRR4302540.10046877/1‑94 (MQ=60)
                       GACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTG                                                                        <  SRR4302540.1832696/94‑1 (MQ=60)
                       GACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTG                                                                        >  SRR4302540.3463724/1‑94 (MQ=60)
                       GACTAACCAGGGCCGTGGCGCAGAGCCAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTG                                                                        >  SRR4302540.5636245/1‑94 (MQ=60)
                       CACTCACCAGGGCCGTGGCGCAGAGCAAATCTAGATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTG                                                                        <  SRR4302540.1549772/94‑1 (MQ=60)
                        ACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGG                                                                       >  SRR4302540.3093400/1‑94 (MQ=60)
                        ACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGG                                                                       <  SRR4302540.5201613/94‑1 (MQ=60)
                        ACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGG                                                                       >  SRR4302540.6827384/1‑94 (MQ=60)
                        ACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGG                                                                       <  SRR4302540.8036157/94‑1 (MQ=60)
                         CTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGC                                                                      <  SRR4302540.4208135/94‑1 (MQ=60)
                         CTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGC                                                                      >  SRR4302540.8155141/1‑94 (MQ=60)
                         CTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGC                                                                      >  SRR4302540.7338021/1‑94 (MQ=60)
                          TCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCG                                                                     >  SRR4302540.1740506/1‑94 (MQ=60)
                          TCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCG                                                                     >  SRR4302540.6922411/1‑94 (MQ=60)
                          CCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCG                                                                     <  SRR4302540.5640403/94‑1 (MQ=60)
                           CACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGT                                                                    <  SRR4302540.6745726/94‑1 (MQ=60)
                            ACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTT                                                                   >  SRR4302540.33873/1‑94 (MQ=60)
                            ACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTT                                                                   >  SRR4302540.9171413/1‑94 (MQ=60)
                             CCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTC                                                                  <  SRR4302540.5749265/94‑1 (MQ=60)
                             CCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGGGGCGTTC                                                                  >  SRR4302540.2973925/1‑94 (MQ=60)
                              CAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCT                                                                 >  SRR4302540.7649185/1‑94 (MQ=60)
                               AGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTC                                                                >  SRR4302540.3905956/1‑94 (MQ=60)
                                GGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCT                                                               <  SRR4302540.2480196/94‑1 (MQ=60)
                                GGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCT                                                               >  SRR4302540.1803625/1‑94 (MQ=60)
                                GGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCT                                                               >  SRR4302540.9448360/1‑94 (MQ=60)
                                  GCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAA                                                             >  SRR4302540.5122026/1‑94 (MQ=60)
                                  GCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAA                                                             <  SRR4302540.6803164/94‑1 (MQ=60)
                                  GCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAA                                                             <  SRR4302540.9916125/94‑1 (MQ=60)
                                   CCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTCAC                                                            >  SRR4302540.1031290/1‑94 (MQ=60)
                                   CCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAAC                                                            <  SRR4302540.7692479/94‑1 (MQ=60)
                                    CGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACT                                                           <  SRR4302540.1841353/94‑1 (MQ=60)
                                    CGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACT                                                           <  SRR4302540.588041/94‑1 (MQ=60)
                                    CGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACT                                                           <  SRR4302540.5894171/94‑1 (MQ=60)
                                    CGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACT                                                           <  SRR4302540.9137964/94‑1 (MQ=60)
                                    CGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACT                                                           >  SRR4302540.2669817/1‑94 (MQ=60)
                                    CGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACT                                                           <  SRR4302540.6586538/94‑1 (MQ=60)
                                     GTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTA                                                          >  SRR4302540.3508580/1‑94 (MQ=60)
                                      TGGCGCAGAGCAAATCTATATGCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGACCGCAGCAAAATGGTGGCGTTCTCTAACTAT                                                         <  SRR4302540.6647077/94‑1 (MQ=60)
                                       GGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATT                                                        >  SRR4302540.4936097/1‑94 (MQ=60)
                                        GCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTT                                                       <  SRR4302540.1457698/94‑1 (MQ=60)
                                        GCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTT                                                       <  SRR4302540.1854903/94‑1 (MQ=60)
                                        GCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTT                                                       <  SRR4302540.1854902/94‑1 (MQ=60)
                                        GCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTT                                                       <  SRR4302540.4092905/94‑1 (MQ=60)
                                          GCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCT                                                     <  SRR4302540.1089313/94‑1 (MQ=60)
                                           CAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTT                                                    >  SRR4302540.2869189/1‑94 (MQ=60)
                                           CAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTT                                                    <  SRR4302540.7693902/94‑1 (MQ=60)
                                            AGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTT                                                   <  SRR4302540.5436486/94‑1 (MQ=60)
                                            AGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTT                                                   <  SRR4302540.5436487/94‑1 (MQ=60)
                                            AGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTT                                                   >  SRR4302540.9655343/1‑94 (MQ=60)
                                            AGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTT                                                   >  SRR4302540.7567247/1‑94 (MQ=60)
                                            AGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTT                                                   <  SRR4302540.7754697/94‑1 (MQ=60)
                                            AGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTAGCGTTCTCTAACTATTTCTTT                                                   >  SRR4302540.5759389/1‑94 (MQ=60)
                                             GAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTG                                                  <  SRR4302540.8383273/94‑1 (MQ=60)
                                              AGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGA                                                 >  SRR4302540.633143/1‑94 (MQ=60)
                                              AGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGA                                                 >  SRR4302540.5872547/1‑94 (MQ=60)
                                              AGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGA                                                 <  SRR4302540.4378812/94‑1 (MQ=60)
                                               GCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGAT                                                <  SRR4302540.10068478/94‑1 (MQ=60)
                                               GCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGAT                                                <  SRR4302540.3771287/94‑1 (MQ=60)
                                               GCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGAT                                                >  SRR4302540.805178/1‑94 (MQ=60)
                                                CAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATA                                               >  SRR4302540.5617584/1‑94 (MQ=60)
                                                CAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATA                                               >  SRR4302540.4134686/1‑94 (MQ=60)
                                                CAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATA                                               <  SRR4302540.1623011/94‑1 (MQ=60)
                                                CAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATA                                               >  SRR4302540.4913565/1‑94 (MQ=60)
                                                 AAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATAC                                              >  SRR4302540.5705583/1‑94 (MQ=60)
                                                 AAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATAC                                              >  SRR4302540.6039781/1‑94 (MQ=60)
                                                 AAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATAC                                              >  SRR4302540.2759512/1‑94 (MQ=60)
                                                  AATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACC                                             >  SRR4302540.9668361/1‑94 (MQ=60)
                                                  AATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACC                                             <  SRR4302540.8405229/94‑1 (MQ=60)
                                                   ATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCA                                            >  SRR4302540.1373624/1‑94 (MQ=60)
                                                   ATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCA                                            >  SRR4302540.223217/1‑94 (MQ=60)
                                                    TGTATATTACGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCAC                                           <  SRR4302540.8955082/94‑1 (MQ=60)
                                                    TCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCAC                                           <  SRR4302540.9416059/94‑1 (MQ=60)
                                                    TCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCAC                                           <  SRR4302540.6561089/94‑1 (MQ=60)
                                                    TCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCAC                                           >  SRR4302540.5773483/1‑94 (MQ=60)
                                                    TCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCAC                                           <  SRR4302540.14693/94‑1 (MQ=60)
                                                     CTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACG                                          >  SRR4302540.8827484/1‑94 (MQ=60)
                                                     CTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACG                                          >  SRR4302540.8815933/1‑94 (MQ=60)
                                                     CTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACG                                          <  SRR4302540.5606767/94‑1 (MQ=60)
                                                     CTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACG                                          <  SRR4302540.4705144/94‑1 (MQ=60)
                                                     CTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACG                                          <  SRR4302540.3124994/94‑1 (MQ=60)
                                                      TATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGC                                         >  SRR4302540.2521508/1‑94 (MQ=60)
                                                       ATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCA                                        <  SRR4302540.7206990/94‑1 (MQ=60)
                                                        TATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAG                                       <  SRR4302540.9418597/94‑1 (MQ=60)
                                                        TATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAG                                       <  SRR4302540.3878780/94‑1 (MQ=60)
                                                         ATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGG                                      <  SRR4302540.9026366/94‑1 (MQ=60)
                                                         ATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGG                                      >  SRR4302540.8275944/1‑94 (MQ=60)
                                                         ATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGG                                      <  SRR4302540.8825827/94‑1 (MQ=60)
                                                         ATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGG                                      >  SRR4302540.8275945/1‑94 (MQ=60)
                                                          TTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGG                                     >  SRR4302540.8625653/1‑94 (MQ=60)
                                                          TTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGG                                     >  SRR4302540.5963174/1‑94 (MQ=60)
                                                          TTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGG                                     <  SRR4302540.8940771/94‑1 (MQ=60)
                                                          TTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGG                                     <  SRR4302540.2491671/94‑1 (MQ=60)
                                                          TTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGG                                     <  SRR4302540.4437273/94‑1 (MQ=60)
                                                           TCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGC                                    >  SRR4302540.3798100/1‑94 (MQ=60)
                                                           TCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGC                                    >  SRR4302540.4286993/1‑94 (MQ=60)
                                                           TCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGC                                    <  SRR4302540.264226/94‑1 (MQ=60)
                                                            CCGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCC                                   >  SRR4302540.9497902/1‑94 (MQ=60)
                                                             CGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAACTGGTGGCGATCTCTAACTATTTCTTTGATACCACGCAGGGCCA                                  >  SRR4302540.4486877/1‑94 (MQ=60)
                                                             CGGTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCA                                  <  SRR4302540.4686141/94‑1 (MQ=60)
                                                               GTACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATA                                >  SRR4302540.7168592/1‑94 (MQ=60)
                                                                TACTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAG                               >  SRR4302540.5946576/1‑94 (MQ=60)
                                                                TACGGATCAAAAAACACGAGCAGAAAAAAGGCCTGTACCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAG                               <  SRR4302540.7894044/94‑1 (MQ=60)
                                                                  CTGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCC                             <  SRR4302540.1038251/94‑1 (MQ=60)
                                                                   TGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCA                            <  SRR4302540.5828857/94‑1 (MQ=60)
                                                                   TGATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCA                            >  SRR4302540.1299369/1‑94 (MQ=60)
                                                                    GATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAG                           <  SRR4302540.367474/94‑1 (MQ=60)
                                                                    GATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAG                           <  SRR4302540.498969/94‑1 (MQ=60)
                                                                    GATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAG                           <  SRR4302540.4146081/94‑1 (MQ=60)
                                                                     ATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGA                          >  SRR4302540.2658939/1‑94 (MQ=60)
                                                                     ATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGA                          >  SRR4302540.5561506/1‑94 (MQ=60)
                                                                     ATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGA                          >  SRR4302540.5577278/1‑94 (MQ=60)
                                                                     ATTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCAAGCAGGGCCATAGCCAGT                          >  SRR4302540.3626887/1‑94 (MQ=60)
                                                                      TTAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGAT                         <  SRR4302540.8488424/94‑1 (MQ=60)
                                                                       TAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGAca                        >  SRR4302540.7602863/1‑92 (MQ=60)
                                                                       TAAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATC                        <  SRR4302540.2738149/94‑1 (MQ=60)
                                                                        AAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCA                       <  SRR4302540.8525245/94‑1 (MQ=60)
                                                                        AAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCA                       >  SRR4302540.9548336/1‑94 (MQ=60)
                                                                        AAAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCA                       <  SRR4302540.1971423/94‑1 (MQ=60)
                                                                         AAAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAA                      <  SRR4302540.3489658/94‑1 (MQ=60)
                                                                          AAAACGCGAGCAGGAAAAAAGGCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAAC                     <  SRR4302540.777088/94‑1 (MQ=60)
                                                                          AAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAAC                     >  SRR4302540.6127529/1‑94 (MQ=60)
                                                                          AAAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAAC                     <  SRR4302540.2585502/94‑1 (MQ=60)
                                                                           AAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACG                    <  SRR4302540.1424473/94‑1 (MQ=60)
                                                                           AAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACG                    <  SRR4302540.9614001/94‑1 (MQ=60)
                                                                           AAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACG                    >  SRR4302540.6977144/1‑94 (MQ=60)
                                                                           AAACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACG                    >  SRR4302540.7997968/1‑94 (MQ=60)
                                                                            AACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGG                   <  SRR4302540.4438698/94‑1 (MQ=60)
                                                                             ACGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGC                  >  SRR4302540.6248996/1‑94 (MQ=60)
                                                                              CGCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCT                 <  SRR4302540.2826883/94‑1 (MQ=60)
                                                                               GCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTG                <  SRR4302540.2079938/94‑1 (MQ=60)
                                                                               GCGAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTG                <  SRR4302540.8635808/94‑1 (MQ=60)
                                                                                 GAGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTA              >  SRR4302540.3735595/1‑94 (MQ=60)
                                                                                  AGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTAC             <  SRR4302540.6795383/94‑1 (MQ=60)
                                                                                  AGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTAC             >  SRR4302540.4034740/1‑94 (MQ=60)
                                                                                  AGCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTAC             <  SRR4302540.1214565/94‑1 (MQ=60)
                                                                                   GCAGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACC            <  SRR4302540.5830473/94‑1 (MQ=60)
                                                                                     AGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGT          <  SRR4302540.6137254/94‑1 (MQ=60)
                                                                                     AGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGT          <  SRR4302540.6622176/94‑1 (MQ=60)
                                                                                     AGGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGT          >  SRR4302540.6655773/1‑94 (MQ=60)
                                                                                      GGAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTG         >  SRR4302540.3438699/1‑94 (MQ=60)
                                                                                       GAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGC        >  SRR4302540.6057738/1‑94 (MQ=60)
                                                                                       GAAAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGC        >  SRR4302540.686664/1‑94 (MQ=60)
                                                                                         AAAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTGTTTGATACCAGGCAGGGCGCTAGCCAGATAAACGGCTGTAGCGTGCGT      >  SRR4302540.4329004/1‑94 (MQ=60)
                                                                                          AAAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTA     >  SRR4302540.1534909/1‑94 (MQ=60)
                                                                                           AAAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAA    >  SRR4302540.5190976/1‑94 (MQ=60)
                                                                                            AAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAAC   <  SRR4302540.5995280/94‑1 (MQ=60)
                                                                                            AAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAAC   <  SRR4302540.119089/94‑1 (MQ=60)
                                                                                            AAGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAAC   <  SRR4302540.995950/94‑1 (MQ=60)
                                                                                             AGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAACG  <  SRR4302540.6417612/94‑1 (MQ=60)
                                                                                             |                                                                                             
TTTGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAGGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAACG  >  NC_000913/3886629‑3886815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑