Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,911,767 A→G R354R (CGT→CGC)  glmU ← N‑acetyl glucosamine‑1‑phosphate uridyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,911,7670AG99.8% 1292.9 / NA 400R354R (CGT→CGC) glmUN‑acetyl glucosamine‑1‑phosphate uridyltransferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (209/190);  minor base C (1/0);  total (210/190)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 429 total aligned reads displayed.

GGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT  >  NC_000913/3911677‑3911856
                                                                                          |                                                                                         
   aaTGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGgcgcgc                                                                                      <  1:9218946/93‑1 (MQ=255)
   aaTGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGgcgcgc                                                                                      >  2:7071824/1‑93 (MQ=255)
    aTGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCt                                                                                     <  2:2429501/93‑1 (MQ=255)
     tGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTACGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCtt                                                                                    >  2:5430113/1‑93 (MQ=255)
     tGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCtt                                                                                    <  2:9728881/93‑1 (MQ=255)
     tGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCtt                                                                                    <  2:424327/93‑1 (MQ=255)
        ttCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCttttt                                                                                 <  1:8508057/93‑1 (MQ=255)
        ttCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCttttt                                                                                 <  2:6068064/93‑1 (MQ=255)
          cccGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTc                                                                               <  1:5463436/93‑1 (MQ=255)
          cccGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTc                                                                               >  2:9647850/1‑93 (MQ=255)
           ccGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCa                                                                              <  2:8683729/93‑1 (MQ=255)
           ccGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCa                                                                              >  1:1109094/1‑93 (MQ=255)
             gcgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtc                                                                            >  2:6630524/1‑93 (MQ=255)
               gcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtctc                                                                          >  2:773503/1‑93 (MQ=255)
               gcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtctc                                                                          >  2:842543/1‑93 (MQ=255)
                 cGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCaa                                                                        >  1:4647463/1‑93 (MQ=255)
                 cGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCaa                                                                        <  2:8854365/93‑1 (MQ=255)
                 cGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTAAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCaa                                                                        <  1:7682544/93‑1 (MQ=255)
                  gATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAc                                                                       >  1:6790287/1‑93 (MQ=255)
                  gATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAc                                                                       >  2:8924276/1‑93 (MQ=255)
                   aTGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACg                                                                      >  1:10035695/1‑93 (MQ=255)
                   aTGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGCCGCGCTTTTTTTATGTCAACg                                                                      >  1:3310066/1‑93 (MQ=255)
                     gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa                                                                    <  2:6500107/93‑1 (MQ=255)
                     gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa                                                                    <  1:1021979/93‑1 (MQ=255)
                     gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa                                                                    >  1:1515910/1‑93 (MQ=255)
                     gTTAACGTTATCGCCAATTTACGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGTCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa                                                                    >  1:9538943/1‑93 (MQ=255)
                       tagcGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGt                                                                  <  2:369585/90‑1 (MQ=255)
                       tAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGt                                                                  >  2:2999918/1‑93 (MQ=255)
                       tAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGt                                                                  <  2:2854204/93‑1 (MQ=255)
                        aaCGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGtt                                                                 >  2:5250878/1‑93 (MQ=255)
                           gTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAcc                                                              <  1:3158447/93‑1 (MQ=255)
                           gTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAcc                                                              <  1:6372796/93‑1 (MQ=255)
                             tATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGa                                                            <  2:3149813/93‑1 (MQ=255)
                                cGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTGTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGt                                                         <  1:3881084/93‑1 (MQ=255)
                                 gCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTg                                                        <  2:8090726/93‑1 (MQ=255)
                                 gCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTg                                                        >  2:7948260/1‑93 (MQ=255)
                                 cccAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTg                                                        <  1:6923207/92‑1 (MQ=255)
                                   cAATTGCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAg                                                      <  2:2205332/93‑1 (MQ=255)
                                    aaTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGc                                                     >  2:719608/1‑93 (MQ=255)
                                    aaTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGc                                                     >  1:8406733/1‑93 (MQ=255)
                                     aTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCa                                                    >  2:5914722/1‑93 (MQ=255)
                                     aTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCa                                                    <  2:3486296/93‑1 (MQ=255)
                                        tCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCt                                                 >  2:5703013/1‑93 (MQ=255)
                                        tCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCt                                                 >  2:3375685/1‑93 (MQ=255)
                                        tCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCt                                                 >  1:2527105/1‑93 (MQ=255)
                                         ccGCATCGCGCAGGTAAGTGAGATGACCAGTTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCta                                                <  2:7354229/93‑2 (MQ=255)
                                          cGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTc                                               <  1:8689957/93‑1 (MQ=255)
                                           gCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTcc                                              <  1:3532702/93‑1 (MQ=255)
                                           gCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTcc                                              <  1:4858526/93‑1 (MQ=255)
                                           gCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTcc                                              <  1:703406/93‑1 (MQ=255)
                                            cATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCa                                             <  1:6563532/93‑1 (MQ=255)
                                              tCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGc                                           >  1:2372085/1‑93 (MQ=255)
                                               cGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCa                                          >  2:4962116/1‑93 (MQ=255)
                                               cGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCa                                          <  1:6200493/93‑1 (MQ=255)
                                                 cccAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAAc                                        >  2:9260575/1‑93 (MQ=255)
                                                 cccAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAAc                                        >  2:4659331/1‑93 (MQ=255)
                                                   cAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTc                                      >  2:9148516/1‑93 (MQ=255)
                                                   cAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTc                                      <  2:553286/93‑1 (MQ=255)
                                                   cAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTc                                      >  2:9580679/1‑93 (MQ=255)
                                                     ggTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAg                                    >  2:4350099/1‑93 (MQ=255)
                                                     ggTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGCCGCGCTTTTTTCAACTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAg                                    <  2:204304/93‑1 (MQ=255)
                                                      gTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGc                                   <  2:4512080/93‑1 (MQ=255)
                                                       taagtaagATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCa                                  <  2:4875578/93‑1 (MQ=255)
                                                       tAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCa                                  <  2:6191373/93‑1 (MQ=255)
                                                       tAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCa                                  <  2:4097093/93‑1 (MQ=255)
                                                       tAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCa                                  >  1:9864172/1‑93 (MQ=255)
                                                        aaGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAc                                 <  1:3636765/93‑1 (MQ=255)
                                                          gTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCa                               >  1:3786268/1‑93 (MQ=255)
                                                           tCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAg                              <  2:3920205/93‑1 (MQ=255)
                                                             agagGACCAGCTTGCGATCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGa                            <  1:1947690/93‑1 (MQ=255)
                                                             aGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGa                            <  2:581608/93‑1 (MQ=255)
                                                             aGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGa                            <  2:724377/93‑1 (MQ=255)
                                                              gATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAc                           >  2:1562388/1‑93 (MQ=255)
                                                              gATGACCAGCTGTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAc                           <  1:4144180/93‑1 (MQ=255)
                                                               aTGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACg                          >  2:1074255/1‑93 (MQ=255)
                                                               aTGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACg                          <  1:7543074/93‑1 (MQ=255)
                                                                tGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgc                         <  1:4237426/93‑1 (MQ=255)
                                                                   ccAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaa                      <  1:1190286/93‑1 (MQ=255)
                                                                   ccAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaa                      <  2:5180646/93‑1 (MQ=255)
                                                                   ccAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaa                      <  1:6060157/93‑1 (MQ=255)
                                                                    cAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaac                     >  2:1162659/1‑93 (MQ=255)
                                                                      gCTTTCGAGCCTTTACCCAGGCGCTCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgg                   <  1:515054/93‑1 (MQ=255)
                                                                      gCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgg                   >  1:2978189/1‑93 (MQ=255)
                                                                      gCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgg                   <  2:750501/93‑1 (MQ=255)
                                                                           cGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaa              <  2:1292446/93‑1 (MQ=255)
                                                                           cGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaa              >  1:902320/1‑93 (MQ=255)
                                                                           cGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaa              <  1:4963719/93‑1 (MQ=255)
                                                                           cGAGCCCTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaa              <  1:8126024/93‑1 (MQ=255)
                                                                            gAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaac             >  1:5585881/1‑93 (MQ=255)
                                                                             aGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacg            >  1:2670913/1‑93 (MQ=255)
                                                                              gCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacgg           <  1:4382390/93‑1 (MQ=255)
                                                                              gCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacggccaaacgg           >  1:7975008/1‑93 (MQ=255)
                                                                                 tttACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGcc        >  1:1719335/1‑93 (MQ=255)
                                                                                  ttACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACCGGCCa       >  2:266523/1‑93 (MQ=255)
                                                                                   tACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCaa      <  1:7191268/93‑1 (MQ=255)
                                                                                   tACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCaa      >  1:8570149/1‑93 (MQ=255)
                                                                                     cccAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATg    >  2:8573592/1‑93 (MQ=255)
                                                                                     cccAGGCGCGCTTGTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATg    <  1:8234970/93‑1 (MQ=255)
                                                                                      ccAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATgg   >  1:2141558/1‑93 (MQ=255)
                                                                                      ccAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATgg   <  1:5796546/93‑1 (MQ=255)
                                                                                          |                                                                                         
GGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT  >  NC_000913/3911677‑3911856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 230 total aligned reads displayed.
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG  >  NC_000913/3911674‑3911860
                                                                                             |                                                                                             
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGG                                                                                               <  SRR4302540.9271302/94‑1 (MQ=60)
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGG                                                                                               <  SRR4302540.694839/94‑1 (MQ=60)
  AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG                                                                                             >  SRR4302540.3864013/1‑94 (MQ=60)
  AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG                                                                                             >  SRR4302540.9258578/1‑94 (MQ=60)
  AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG                                                                                             <  SRR4302540.9182739/94‑1 (MQ=60)
  AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG                                                                                             >  SRR4302540.1094357/1‑94 (MQ=60)
  AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG                                                                                             >  SRR4302540.6665873/1‑94 (MQ=60)
   GGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGC                                                                                            >  SRR4302540.3804190/1‑94 (MQ=60)
    GTAGTGCTTCCCGGGCAGATGTTAACGTTATCGCCAATTTCCGCATCGCCAAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCG                                                                                           <  SRR4302540.6483709/94‑1 (MQ=60)
     TAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGT                                                                                          >  SRR4302540.286000/1‑94 (MQ=60)
      AATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCT                                                                                         <  SRR4302540.8250187/94‑1 (MQ=60)
      AATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCT                                                                                         <  SRR4302540.9329524/94‑1 (MQ=60)
      AATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCT                                                                                         <  SRR4302540.1477145/94‑1 (MQ=60)
       ATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTT                                                                                        >  SRR4302540.4163302/1‑94 (MQ=60)
        TGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTT                                                                                       <  SRR4302540.3644418/94‑1 (MQ=60)
         GGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTT                                                                                      <  SRR4302540.7062467/94‑1 (MQ=60)
         GGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTT                                                                                      >  SRR4302540.4069789/1‑94 (MQ=60)
             CCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCA                                                                                  >  SRR4302540.1120561/1‑94 (MQ=60)
             CCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCA                                                                                  <  SRR4302540.5523574/94‑1 (MQ=60)
              CCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAT                                                                                 <  SRR4302540.8572418/94‑1 (MQ=60)
              CCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAT                                                                                 <  SRR4302540.9028967/94‑1 (MQ=60)
              CCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAT                                                                                 >  SRR4302540.8360713/1‑94 (MQ=60)
              CCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAT                                                                                 <  SRR4302540.584032/94‑1 (MQ=60)
                GCGCCGATTTTAACGTTATCGCCAATTTCCGCATCCCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCT                                                                               <  SRR4302540.1969306/94‑1 (MQ=60)
                GCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCT                                                                               >  SRR4302540.7973568/1‑94 (MQ=60)
                  GCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCTCTTTTTTCATCTCA                                                                             <  SRR4302540.1571428/94‑1 (MQ=60)
                   CCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAA                                                                            <  SRR4302540.3321801/94‑1 (MQ=60)
                   CCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAA                                                                            >  SRR4302540.9758911/1‑94 (MQ=60)
                   CCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAA                                                                            >  SRR4302540.6094135/1‑94 (MQ=60)
                   CCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAA                                                                            >  SRR4302540.4697211/1‑94 (MQ=60)
                    CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAC                                                                           >  SRR4302540.6865382/1‑94 (MQ=60)
                    CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTAAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAC                                                                           <  SRR4302540.7769571/94‑1 (MQ=60)
                     GATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACG                                                                          >  SRR4302540.10152411/1‑94 (MQ=60)
                     GATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGCCGCGCTTTTTTTATGTCAACG                                                                          >  SRR4302540.3346328/1‑94 (MQ=60)
                      ATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGA                                                                         >  SRR4302540.6712738/1‑94 (MQ=60)
                      ATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGA                                                                         >  SRR4302540.6245619/1‑94 (MQ=60)
                      ATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGA                                                                         >  SRR4302540.411705/1‑94 (MQ=60)
                      ATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGA                                                                         >  SRR4302540.3399343/1‑94 (MQ=60)
                       TGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAA                                                                        >  SRR4302540.1532677/1‑94 (MQ=60)
                       TGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAA                                                                        >  SRR4302540.440737/1‑94 (MQ=60)
                       TGTTAACGTTATCGCCAATTTACGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGTCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAA                                                                        >  SRR4302540.9651834/1‑94 (MQ=60)
                        GTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAG                                                                       >  SRR4302540.8085501/1‑94 (MQ=60)
                        GTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAG                                                                       <  SRR4302540.1032349/94‑1 (MQ=60)
                         TTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGT                                                                      >  SRR4302540.7060875/1‑94 (MQ=60)
                         TTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGT                                                                      <  SRR4302540.7200557/94‑1 (MQ=60)
                         TTAACCTTATCGCCAATTTCCGCATCGCCCAGTTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGT                                                                      <  SRR4302540.1909614/94‑1 (MQ=60)
                          TAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTT                                                                     <  SRR4302540.6024034/94‑1 (MQ=60)
                          TAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCCTTTTTTCTCTCAACGAAGTT                                                                     >  SRR4302540.7225536/1‑94 (MQ=60)
                           AACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTA                                                                    >  SRR4302540.479790/1‑94 (MQ=60)
                           AACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTA                                                                    <  SRR4302540.9302633/94‑1 (MQ=60)
                           AACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTGTCGAGCCTTTACCCAGGCGCGGTTTTTTCATCTCAACCAAGTTC                                                                    >  SRR4302540.2918502/1‑94 (MQ=60)
                            ACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAC                                                                   <  SRR4302540.1136976/94‑1 (MQ=60)
                             CGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACC                                                                  >  SRR4302540.8545847/1‑94 (MQ=60)
                             CGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACC                                                                  <  SRR4302540.1909211/94‑1 (MQ=60)
                              GTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCG                                                                 <  SRR4302540.11583/94‑1 (MQ=60)
                              GTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCG                                                                 >  SRR4302540.6181253/1‑94 (MQ=60)
                              GTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCG                                                                 <  SRR4302540.6443751/94‑1 (MQ=60)
                              GTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCG                                                                 <  SRR4302540.3192817/94‑1 (MQ=60)
                               TTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGA                                                                <  SRR4302540.7673130/94‑1 (MQ=60)
                                TATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC                                                               >  SRR4302540.1859486/1‑94 (MQ=60)
                                TATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC                                                               <  SRR4302540.4535769/94‑1 (MQ=60)
                                TATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC                                                               >  SRR4302540.3260475/1‑94 (MQ=60)
                                TATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC                                                               >  SRR4302540.4735241/1‑94 (MQ=60)
                                TATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC                                                               <  SRR4302540.5376816/94‑1 (MQ=60)
                                TATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC                                                               >  SRR4302540.4193423/1‑94 (MQ=60)
                                TATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC                                                               <  SRR4302540.5552518/94‑1 (MQ=60)
                                 ATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACG                                                              <  SRR4302540.379324/94‑1 (MQ=60)
                                 ATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACG                                                              <  SRR4302540.7129504/94‑1 (MQ=60)
                                   CGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTGTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTG                                                            <  SRR4302540.3923253/94‑1 (MQ=60)
                                    GCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGA                                                           >  SRR4302540.2863300/1‑94 (MQ=60)
                                    CCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGA                                                           <  SRR4302540.7000252/94‑1 (MQ=60)
                                     CCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAG                                                          <  SRR4302540.5355866/94‑1 (MQ=60)
                                      CAATTTCCGCATCGCCCAGGTAAGTCAGATGACCATCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGC                                                         <  SRR4302540.5709737/94‑1 (MQ=60)
                                      CAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCACCGAAGTTACCGACGTGAGC                                                         >  SRR4302540.8504309/1‑94 (MQ=60)
                                      CAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGCCGTGAGC                                                         >  SRR4302540.2304272/1‑94 (MQ=60)
                                      CAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGC                                                         >  SRR4302540.8504310/1‑94 (MQ=60)
                                       AATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCA                                                        <  SRR4302540.5618708/94‑1 (MQ=60)
                                       AATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCA                                                        <  SRR4302540.7323752/94‑1 (MQ=60)
                                        ATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCAC                                                       >  SRR4302540.8709563/1‑94 (MQ=60)
                                        ATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCAC                                                       >  SRR4302540.6408651/1‑94 (MQ=60)
                                        ATTTCCGCATCGCCCAGGGAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCGTTTTTCATCTCAACGAAGTTATCGACGTGAGCAC                                                       >  SRR4302540.131038/1‑94 (MQ=60)
                                         TTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACC                                                      <  SRR4302540.5115623/94‑1 (MQ=60)
                                          TTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCT                                                     >  SRR4302540.643353/1‑94 (MQ=60)
                                          TTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCT                                                     >  SRR4302540.2554378/1‑94 (MQ=60)
                                            CCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTC                                                   <  SRR4302540.5341423/94‑1 (MQ=60)
                                            CCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTC                                                   <  SRR4302540.269385/94‑1 (MQ=60)
                                            CCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTC                                                   <  SRR4302540.269386/94‑1 (MQ=60)
                                             CGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCC                                                  <  SRR4302540.8790853/94‑1 (MQ=60)
                                              GCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCA                                                 <  SRR4302540.4910610/94‑1 (MQ=60)
                                              GCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCA                                                 <  SRR4302540.367757/94‑1 (MQ=60)
                                              GCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCA                                                 <  SRR4302540.3571264/94‑1 (MQ=60)
                                               CATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAG                                                <  SRR4302540.6636278/94‑1 (MQ=60)
                                                ATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGC                                               <  SRR4302540.8430538/94‑1 (MQ=60)
                                                ATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGC                                               <  SRR4302540.104093/94‑1 (MQ=60)
                                                ATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGC                                               <  SRR4302540.4687322/94‑1 (MQ=60)
                                                ATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGC                                               >  SRR4302540.2397645/1‑94 (MQ=60)
                                                ATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGA                                               >  SRR4302540.3539607/1‑94 (MQ=60)
                                                 TCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCA                                              <  SRR4302540.6838159/94‑1 (MQ=60)
                                                  CGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAA                                             >  SRR4302540.8824057/1‑94 (MQ=60)
                                                  CGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAA                                             >  SRR4302540.8824063/1‑94 (MQ=60)
                                                   GCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAAC                                            <  SRR4302540.7226155/94‑1 (MQ=60)
                                                     CCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTC                                          >  SRR4302540.3672502/1‑94 (MQ=60)
                                                     CCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTC                                          <  SRR4302540.4915203/94‑1 (MQ=60)
                                                      CAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCA                                         >  SRR4302540.6524139/1‑94 (MQ=60)
                                                      CAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCA                                         >  SRR4302540.5121008/1‑94 (MQ=60)
                                                       AGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAG                                        >  SRR4302540.6698133/1‑94 (MQ=60)
                                                       AGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAG                                        <  SRR4302540.4499353/94‑1 (MQ=60)
                                                         GTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCA                                      <  SRR4302540.1449645/94‑1 (MQ=60)
                                                         GTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCA                                      >  SRR4302540.6963986/1‑94 (MQ=60)
                                                         GTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCA                                      <  SRR4302540.8590644/94‑1 (MQ=60)
                                                          TAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAC                                     <  SRR4302540.2127840/94‑1 (MQ=60)
                                                          TAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAC                                     >  SRR4302540.3412252/1‑94 (MQ=60)
                                                          TAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAC                                     <  SRR4302540.10153672/94‑1 (MQ=60)
                                                          TAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAC                                     <  SRR4302540.10153673/94‑1 (MQ=60)
                                                           AAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACC                                    >  SRR4302540.803810/1‑94 (MQ=60)
                                                            AGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCA                                   >  SRR4302540.3827550/1‑94 (MQ=60)
                                                            AGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCA                                   <  SRR4302540.3072322/94‑1 (MQ=60)
                                                             ATCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAG                                  <  SRR4302540.9433795/94‑1 (MQ=60)
                                                              TCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGG                                 <  SRR4302540.1618109/94‑1 (MQ=60)
                                                                AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC                               >  SRR4302540.3886240/1‑94 (MQ=60)
                                                                AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC                               <  SRR4302540.5940708/94‑1 (MQ=60)
                                                                AGATGACCAGCTTTAGAGCCTTTACCCAGGCGCGCTATTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC                               <  SRR4302540.5561356/94‑1 (MQ=60)
                                                                AGAGGACCAGCTTGCGATCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC                               <  SRR4302540.1968888/94‑1 (MQ=60)
                                                                 GATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACC                              >  SRR4302540.3565761/1‑94 (MQ=60)
                                                                 GATGACCAGCTGTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACG                              <  SRR4302540.4189029/94‑1 (MQ=60)
                                                                  ATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGC                             >  SRR4302540.4962264/1‑94 (MQ=60)
                                                                  ATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGC                             <  SRR4302540.7627593/94‑1 (MQ=60)
                                                                   TGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCA                            >  SRR4302540.7641255/1‑94 (MQ=60)
                                                                   TGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCA                            <  SRR4302540.4283534/94‑1 (MQ=60)
                                                                   TGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCA                            <  SRR4302540.8529744/94‑1 (MQ=60)
                                                                   TGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCA                            >  SRR4302540.4423527/1‑94 (MQ=60)
                                                                    GACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAA                           <  SRR4302540.9441742/94‑1 (MQ=60)
                                                                    GACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAA                           >  SRR4302540.997787/1‑94 (MQ=60)
                                                                    GACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAA                           <  SRR4302540.3094305/94‑1 (MQ=60)
                                                                      CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC                         <  SRR4302540.1202558/94‑1 (MQ=60)
                                                                      CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC                         <  SRR4302540.6127509/94‑1 (MQ=60)
                                                                       CAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACG                        >  SRR4302540.632442/1‑94 (MQ=60)
                                                                       CAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACG                        <  SRR4302540.5794391/94‑1 (MQ=60)
                                                                       CAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACG                        <  SRR4302540.2291550/94‑1 (MQ=60)
                                                                       CAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACG                        >  SRR4302540.8110602/1‑94 (MQ=60)
                                                                        cgctgTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTGAACGAAGTTACCGACGTGAGCCCCTTCCAGCAACTCAGCACCAGGACGCAAACGG                       <  SRR4302540.7871785/89‑1 (MQ=60)
                                                                        accttccgatCCTTTGCCCAGGCGCGCTTTTTGCATCTCAACGAAGTTACCGACGTGAGCACCTGCCAGCAACTCAGCACCAGGACGCAAACGG                       <  SRR4302540.3939493/84‑1 (MQ=60)
                                                                        AGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGG                       >  SRR4302540.3011090/1‑94 (MQ=60)
                                                                         GCTTTCGAGCCTTTACCCAGGCGCTCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGG                      <  SRR4302540.520580/94‑1 (MQ=60)
                                                                         GCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGG                      >  SRR4302540.1016264/1‑94 (MQ=60)
                                                                          CTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGC                     <  SRR4302540.10028682/94‑1 (MQ=60)
                                                                          CTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGC                     <  SRR4302540.7007559/94‑1 (MQ=60)
                                                                            TTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAA                   >  SRR4302540.2638224/1‑94 (MQ=60)
                                                                             TCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAA                  >  SRR4302540.911902/1‑94 (MQ=60)
                                                                             TCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAA                  >  SRR4302540.436432/1‑94 (MQ=60)
                                                                              CGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC                 <  SRR4302540.8220342/94‑1 (MQ=60)
                                                                              CGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC                 <  SRR4302540.5017406/94‑1 (MQ=60)
                                                                              CGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC                 <  SRR4302540.1539629/94‑1 (MQ=60)
                                                                              CGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC                 >  SRR4302540.5647358/1‑94 (MQ=60)
                                                                              CGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC                 >  SRR4302540.6068625/1‑94 (MQ=60)
                                                                              CGAGCCCTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC                 <  SRR4302540.8220341/94‑1 (MQ=60)
                                                                               GAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACG                >  SRR4302540.2699840/1‑94 (MQ=60)
                                                                               GAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACCGGCAAACG                >  SRR4302540.2361790/1‑94 (MQ=60)
                                                                                AGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGG               <  SRR4302540.8892776/94‑1 (MQ=60)
                                                                                AGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGG               >  SRR4302540.4270772/1‑94 (MQ=60)
                                                                                AGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGCCAAACGG               >  SRR4302540.8067919/1‑94 (MQ=60)
                                                                                 GCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGG              <  SRR4302540.1975331/94‑1 (MQ=60)
                                                                                  CCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGC             >  SRR4302540.8767088/1‑94 (MQ=60)
                                                                                   CTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCC            >  SRR4302540.865347/1‑94 (MQ=60)
                                                                                   CTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCC            >  SRR4302540.865346/1‑94 (MQ=60)
                                                                                   CTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCC            >  SRR4302540.4930132/1‑94 (MQ=60)
                                                                                   CTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCC            >  SRR4302540.4439704/1‑94 (MQ=60)
                                                                                    TTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCA           <  SRR4302540.3226928/94‑1 (MQ=60)
                                                                                    TTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCA           >  SRR4302540.8322522/1‑94 (MQ=60)
                                                                                    TTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCA           >  SRR4302540.366502/1‑94 (MQ=60)
                                                                                     TTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAA          >  SRR4302540.8669707/1‑94 (MQ=60)
                                                                                     TTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGCGCCAA          >  SRR4302540.6902171/1‑94 (MQ=60)
                                                                                      TACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAAT         <  SRR4302540.7271425/94‑1 (MQ=60)
                                                                                      TACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAAG         >  SRR4302540.2501151/1‑94 (MQ=60)
                                                                                       ACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCTGCACCAGGACGCAAACGGGCAAACGGGCCAATG        >  SRR4302540.9810878/1‑94 (MQ=60)
                                                                                        CCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGG       >  SRR4302540.9861659/1‑94 (MQ=60)
                                                                                        CCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGG       >  SRR4302540.2399705/1‑94 (MQ=60)
                                                                                        CCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGG       >  SRR4302540.2164570/1‑94 (MQ=60)
                                                                                        CCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACAAGGCCGAAAACGGGCAAACGGGCCAATGG       <  SRR4302540.3730389/94‑1 (MQ=60)
                                                                                        CCCAGGCGCGCTTGTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGG       <  SRR4302540.8330688/94‑1 (MQ=60)
                                                                                         CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT      >  SRR4302540.1165298/1‑94 (MQ=60)
                                                                                         CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT      <  SRR4302540.5860596/94‑1 (MQ=60)
                                                                                         CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGA      >  SRR4302540.8629682/1‑94 (MQ=60)
                                                                                         CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGA      >  SRR4302540.7713418/1‑94 (MQ=60)
                                                                                         CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGA      >  SRR4302540.7453805/1‑94 (MQ=60)
                                                                                          CAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTA     <  SRR4302540.6511897/94‑1 (MQ=60)
                                                                                          CAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTA     >  SRR4302540.3104696/1‑94 (MQ=60)
                                                                                          CAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTA     >  SRR4302540.9528070/1‑94 (MQ=60)
                                                                                           AGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTTAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTAC    >  SRR4302540.9431641/1‑94 (MQ=60)
                                                                                           AGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTAC    <  SRR4302540.8008864/94‑1 (MQ=60)
                                                                                           AGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTAC    <  SRR4302540.6175837/94‑1 (MQ=60)
                                                                                            GGCGCGCTTTTTTCATCTCCACGAGGTTACCGTCGTGATCACCTTCCAGGAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACA   <  SRR4302540.622505/94‑1 (MQ=60)
                                                                                            GGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCTCCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACA   >  SRR4302540.4315726/1‑94 (MQ=60)
                                                                                            GGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACA   >  SRR4302540.770218/1‑94 (MQ=60)
                                                                                            GGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACA   <  SRR4302540.622503/94‑1 (MQ=60)
                                                                                             GCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCTCCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG  <  SRR4302540.6178721/94‑1 (MQ=60)
                                                                                             GCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCCCCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG  <  SRR4302540.5267354/94‑1 (MQ=60)
                                                                                             GCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG  <  SRR4302540.1915506/94‑1 (MQ=60)
                                                                                             GCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG  <  SRR4302540.5267356/94‑1 (MQ=60)
                                                                                             GCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG  <  SRR4302540.8369245/94‑1 (MQ=60)
                                                                                             |                                                                                             
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG  >  NC_000913/3911674‑3911860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑