Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,911,767 |
A→G |
R354R (CGT→CGC) |
glmU ← |
N‑acetyl glucosamine‑1‑phosphate uridyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,911,767 | 0 | A | G | 99.5%
| 615.3
/ NA
| 196 | R354R (CGT→CGC) | glmU | N‑acetyl glucosamine‑1‑phosphate uridyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (112/83); minor base C (1/0); total (113/83) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 210 total aligned reads displayed.
GGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT > NC_000913/3911677‑3911856
|
ggTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGcg > 2:2945057/1‑93 (MQ=255)
ggTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGcg > 1:2979488/1‑93 (MQ=255)
gTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGgcgc < 2:839515/93‑1 (MQ=255)
gTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGgcgc > 1:4673962/1‑93 (MQ=255)
aaTGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGcgcgg > 2:107202/1‑92 (MQ=255)
aTGGTTCCCGCGCCGATGTTAACGTTATTGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCt > 2:4299778/1‑93 (MQ=255)
aTGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCt > 1:4462369/1‑93 (MQ=255)
tGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCtt < 1:3237375/93‑1 (MQ=255)
ggTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCttt > 1:2258609/1‑93 (MQ=255)
gTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCtttt < 1:3163548/93‑1 (MQ=255)
ttCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCttttt > 1:5577289/1‑93 (MQ=255)
tCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCtttttt > 1:910082/1‑93 (MQ=255)
cgcgCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAt < 1:3843030/93‑1 (MQ=255)
gcgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCTGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtc > 1:4222233/1‑93 (MQ=255)
gcgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtc < 1:884114/93‑1 (MQ=255)
ccgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtc < 2:3941045/92‑1 (MQ=255)
gcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCTAGCCGCGCTTTTTTCAtctc > 2:5054230/1‑93 (MQ=255)
gcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCAtctc > 2:3843758/1‑93 (MQ=255)
ccGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTtttcatttca > 1:3290313/1‑93 (MQ=255)
cGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCaa > 2:3497149/1‑93 (MQ=255)
cGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCaa > 2:5943558/1‑93 (MQ=255)
cGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCGTTACCCAGGCGCGCTTTTTTCATCTCaa > 1:1823033/1‑93 (MQ=255)
gATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAc > 1:164514/1‑93 (MQ=255)
aTGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACg > 1:988032/1‑93 (MQ=255)
aTGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACg > 2:6053404/1‑93 (MQ=255)
tGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGa > 1:1436415/1‑93 (MQ=255)
gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa < 2:5503045/93‑1 (MQ=255)
gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa > 1:5641462/1‑93 (MQ=255)
gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa < 1:10415/93‑1 (MQ=255)
gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa < 2:3554844/93‑1 (MQ=255)
gTTAACGTTATCGCAAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGaa > 2:1899134/1‑93 (MQ=255)
ttAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAg < 1:3617852/93‑1 (MQ=255)
tAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCCACGAAGt > 2:2131512/1‑93 (MQ=255)
cGTTCTCTCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAc < 1:235141/93‑1 (MQ=255)
cGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAc < 1:5193112/93‑1 (MQ=255)
cGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGACTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAc > 1:5437134/1‑93 (MQ=255)
gTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCCACGAAGTTAcc > 2:1179018/1‑93 (MQ=255)
ttATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCg > 2:656278/1‑93 (MQ=255)
ttATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCg > 1:4079090/1‑93 (MQ=255)
tATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGa < 1:4522829/93‑1 (MQ=255)
tATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGa > 1:2794925/1‑93 (MQ=255)
aTCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAc > 2:3749180/1‑93 (MQ=255)
cGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGt < 1:2575955/93‑1 (MQ=255)
cAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAg > 2:4426171/1‑93 (MQ=255)
aaTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGc > 1:4902043/1‑93 (MQ=255)
aTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGcc > 2:6260795/1‑92 (MQ=255)
ttCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCAcc < 1:4110449/93‑1 (MQ=255)
tCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCt < 2:5792758/93‑1 (MQ=255)
cGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTc < 1:5405595/93‑1 (MQ=255)
cGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTc < 2:2055670/93‑1 (MQ=255)
cGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCa < 2:4887453/93‑1 (MQ=255)
cccAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCCAc > 2:765728/1‑93 (MQ=255)
cccAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAAc > 1:5820415/1‑93 (MQ=255)
cccAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAAc < 2:2757864/93‑1 (MQ=255)
cAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTc < 2:888917/93‑1 (MQ=255)
aGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCa < 2:184522/93‑1 (MQ=255)
aGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCa > 2:5175958/1‑93 (MQ=255)
ggTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAg > 1:3925540/1‑93 (MQ=255)
tAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCa > 1:3080927/1‑93 (MQ=255)
tAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCa > 2:4120244/1‑93 (MQ=255)
aaGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAc > 1:925763/1‑93 (MQ=255)
aaGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAc < 1:2065576/93‑1 (MQ=255)
aGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACCCAGCAcc < 2:5105319/93‑1 (MQ=255)
tCAGATGACCAGCTTTCGAGCCTTTATCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCCACTCAGCACCAg > 1:24150/1‑93 (MQ=255)
tCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAg < 2:1317771/93‑1 (MQ=255)
cAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAgg > 2:417667/1‑93 (MQ=255)
cAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAgg > 2:2311242/1‑93 (MQ=255)
aGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGa < 1:1936136/93‑1 (MQ=255)
aGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGa > 2:2367995/1‑93 (MQ=255)
gATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAc < 2:72855/93‑1 (MQ=255)
gATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAc > 1:1290365/1‑93 (MQ=255)
gATGACCAGCTTTCGAGACTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAc > 1:749535/1‑93 (MQ=255)
aTGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACg > 1:165583/1‑93 (MQ=255)
ccAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaa < 2:1211276/93‑1 (MQ=255)
ccAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaa < 1:1749564/93‑1 (MQ=255)
ccAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaa < 1:504439/93‑1 (MQ=255)
ccAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCATCCAGCAACTCAGCACCAGGACgcaaa > 1:3519807/1‑93 (MQ=255)
ccAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAACGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgccaa > 1:4303249/1‑93 (MQ=255)
ccAGCTGTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaa < 1:5306456/93‑1 (MQ=255)
cAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaac > 1:6134811/1‑93 (MQ=255)
cAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAACGACGTGAGCAACTTCCAGCAACTCAGCACCAGGACgcaaac > 2:4819737/1‑93 (MQ=255)
aGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacg < 2:4570306/93‑1 (MQ=255)
aGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacg < 1:3698306/93‑1 (MQ=255)
aGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACccaaacg < 2:5237578/93‑1 (MQ=255)
gCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgg < 1:1478308/93‑1 (MQ=255)
tttCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCCCCTTCCAGCAACTCAGCACCAGGACgcaaacgggc < 2:5349434/93‑1 (MQ=255)
tttCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggc > 2:6287226/1‑93 (MQ=255)
ttCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggca < 1:289960/93‑1 (MQ=255)
cGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaa < 2:2688317/93‑1 (MQ=255)
gAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaac < 1:2260433/93‑1 (MQ=255)
aGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacg > 2:1798482/1‑93 (MQ=255)
gCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacgg > 1:418306/1‑93 (MQ=255)
cTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCaaacgggcaaacgggc > 1:4033297/1‑93 (MQ=255)
aCCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAAt > 2:5223058/1‑93 (MQ=255)
cccAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATg > 1:3773372/1‑93 (MQ=255)
ccAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATgg > 2:4958920/1‑93 (MQ=255)
cAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATgga > 1:1598330/1‑92 (MQ=255)
cAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGt > 1:2131674/1‑93 (MQ=255)
cAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGt > 1:1511417/1‑93 (MQ=255)
cAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGt < 1:5945214/93‑1 (MQ=255)
|
GGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT > NC_000913/3911677‑3911856
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG > NC_000913/3911674‑3911860
|
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGG < SRR4302533.4301659/94‑1 (MQ=60)
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGG < SRR4302533.825283/94‑1 (MQ=60)
CAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGC > SRR4302533.3335408/1‑94 (MQ=60)
CAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGC > SRR4302533.4529920/1‑94 (MQ=60)
AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG > SRR4302533.2997719/1‑94 (MQ=60)
AGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCG < SRR4302533.477768/94‑1 (MQ=60)
GGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGC > SRR4302533.4702282/1‑94 (MQ=60)
GTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCG < SRR4302533.6144343/94‑1 (MQ=60)
GTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCG > SRR4302533.5438358/1‑94 (MQ=60)
AATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCT > SRR4302533.4489360/1‑94 (MQ=60)
ATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTT > SRR4302533.1692957/1‑94 (MQ=60)
TGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTT < SRR4302533.3257324/94‑1 (MQ=60)
TGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTT > SRR4302533.2272584/1‑94 (MQ=60)
GTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTT > SRR4302533.5610994/1‑94 (MQ=60)
GTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTT < SRR4302533.3183019/94‑1 (MQ=60)
TTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTT > SRR4302533.915420/1‑94 (MQ=60)
CGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCTGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATC > SRR4302533.4247762/1‑94 (MQ=60)
CGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATC < SRR4302533.3866506/94‑1 (MQ=60)
GCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCT < SRR4302533.889306/94‑1 (MQ=60)
GCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCT < SRR4302533.3702686/94‑1 (MQ=60)
GCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCT < SRR4302533.2855158/94‑1 (MQ=60)
GCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATTTCA > SRR4302533.3310627/1‑94 (MQ=60)
CCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCGTTACCCAGGCGCGCTTTTTTCATCTCAA > SRR4302533.1834169/1‑94 (MQ=60)
CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTTATCTCAAC > SRR4302533.54818/1‑94 (MQ=60)
CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAC > SRR4302533.982045/1‑94 (MQ=60)
CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAC > SRR4302533.165559/1‑94 (MQ=60)
CGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAAC > SRR4302533.2961804/1‑94 (MQ=60)
GATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACG > SRR4302533.993813/1‑94 (MQ=60)
GATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACG > SRR4302533.3880151/1‑94 (MQ=60)
ATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGA > SRR4302533.1445089/1‑94 (MQ=60)
TGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAA > SRR4302533.5675561/1‑94 (MQ=60)
TGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACCAA > SRR4302533.2543445/1‑94 (MQ=60)
GTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAG > SRR4302533.5090134/1‑94 (MQ=60)
GTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAG < SRR4302533.10501/94‑1 (MQ=60)
TTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGT > SRR4302533.5378122/1‑94 (MQ=60)
TTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGT < SRR4302533.3640105/94‑1 (MQ=60)
ACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAC > SRR4302533.3078075/1‑94 (MQ=60)
ACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGACTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAC > SRR4302533.5469880/1‑94 (MQ=60)
CGTTCTCTCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACC < SRR4302533.236590/94‑1 (MQ=60)
CGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACC < SRR4302533.4285660/94‑1 (MQ=60)
CGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACC < SRR4302533.5224436/94‑1 (MQ=60)
CGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACC > SRR4302533.6092001/1‑94 (MQ=60)
GTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCG > SRR4302533.4103922/1‑94 (MQ=60)
GTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCG > SRR4302533.3823030/1‑94 (MQ=60)
GTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCG < SRR4302533.5635007/94‑1 (MQ=60)
TTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGA > SRR4302533.2812114/1‑94 (MQ=60)
TATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC < SRR4302533.4550209/94‑1 (MQ=60)
TATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGAC < SRR4302533.3771410/94‑1 (MQ=60)
CGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTG < SRR4302533.3227568/94‑1 (MQ=60)
CGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTG < SRR4302533.2591802/94‑1 (MQ=60)
GCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGA < SRR4302533.1212952/94‑1 (MQ=60)
CCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAG < SRR4302533.4066288/94‑1 (MQ=60)
CAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGC < SRR4302533.3924449/94‑1 (MQ=60)
CAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGC > SRR4302533.4931747/1‑94 (MQ=60)
ATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCAC > SRR4302533.178406/1‑94 (MQ=60)
TTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCT < SRR4302533.4135434/94‑1 (MQ=60)
TTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCT < SRR4302533.3500634/94‑1 (MQ=60)
TCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTT > SRR4302533.4963260/1‑94 (MQ=60)
CCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTC > SRR4302533.5827979/1‑94 (MQ=60)
CGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCC < SRR4302533.4010864/94‑1 (MQ=60)
CGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCC > SRR4302533.4188062/1‑94 (MQ=60)
CGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCC < SRR4302533.5438079/94‑1 (MQ=60)
GCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCA < SRR4302533.1862543/94‑1 (MQ=60)
CATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAG > SRR4302533.4730288/1‑94 (MQ=60)
CATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAG < SRR4302533.1632123/94‑1 (MQ=60)
TCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCA < SRR4302533.834196/94‑1 (MQ=60)
GCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAAC > SRR4302533.5855574/1‑94 (MQ=60)
CCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACT > SRR4302533.1659173/1‑94 (MQ=60)
CCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTC > SRR4302533.1491424/1‑94 (MQ=60)
CCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTC > SRR4302533.4543688/1‑94 (MQ=60)
CAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCA > SRR4302533.1870443/1‑94 (MQ=60)
AGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAG > SRR4302533.3949510/1‑94 (MQ=60)
AGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAG < SRR4302533.5265925/94‑1 (MQ=60)
GTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCA > SRR4302533.3099828/1‑94 (MQ=60)
GTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCA > SRR4302533.2649709/1‑94 (MQ=60)
GTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCA < SRR4302533.2050005/94‑1 (MQ=60)
TAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCAC > SRR4302533.931196/1‑94 (MQ=60)
AAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACC < SRR4302533.2078306/94‑1 (MQ=60)
AGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCA > SRR4302533.2163469/1‑94 (MQ=60)
AGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCA > SRR4302533.931031/1‑94 (MQ=60)
AGTCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCGTTTTTTATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACACAGCACCC > SRR4302533.3269198/1‑94 (MQ=60)
GTCAGATGACCAGCTTTCGAGCCTTTATCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCCACTCAGCACCAG > SRR4302533.24310/1‑94 (MQ=60)
TCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGG > SRR4302533.664216/1‑94 (MQ=60)
TCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGG < SRR4302533.1568337/94‑1 (MQ=60)
TCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGG > SRR4302533.2384956/1‑94 (MQ=60)
TCAGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGG < SRR4302533.2934648/94‑1 (MQ=60)
AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC < SRR4302533.1445646/94‑1 (MQ=60)
AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC < SRR4302533.3543676/94‑1 (MQ=60)
AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC < SRR4302533.1947945/94‑1 (MQ=60)
AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC > SRR4302533.2273546/1‑94 (MQ=60)
AGATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC > SRR4302533.1298134/1‑94 (MQ=60)
AGATGACCAGCTTTCGAGACTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAC > SRR4302533.753950/1‑94 (MQ=60)
GATGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACG > SRR4302533.166635/1‑94 (MQ=60)
TGACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCA > SRR4302533.2133414/1‑94 (MQ=60)
ACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCATCCAGCAACTCAGCACCAGGACGCAAA > SRR4302533.3541506/1‑94 (MQ=60)
ACCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTAACGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCCAA > SRR4302533.4329139/1‑94 (MQ=60)
CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC > SRR4302533.1412179/1‑94 (MQ=60)
CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC > SRR4302533.6171776/1‑94 (MQ=60)
CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC < SRR4302533.1760217/94‑1 (MQ=60)
CCAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC < SRR4302533.507432/94‑1 (MQ=60)
CCAGCTGTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAAC < SRR4302533.5338257/94‑1 (MQ=60)
CAGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACG < SRR4302533.2298664/94‑1 (MQ=60)
AGCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGG < SRR4302533.3721020/94‑1 (MQ=60)
GCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGG < SRR4302533.1487240/94‑1 (MQ=60)
GCTTTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGG < SRR4302533.4771741/94‑1 (MQ=60)
TTCGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAA < SRR4302533.291726/94‑1 (MQ=60)
CGAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC > SRR4302533.4133254/1‑94 (MQ=60)
CGAGCCTTTACCAAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGTCGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAAC < SRR4302533.4380210/94‑1 (MQ=60)
GAGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACG < SRR4302533.2274415/94‑1 (MQ=60)
AGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGG < SRR4302533.5904573/94‑1 (MQ=60)
AGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGG > SRR4302533.420812/1‑94 (MQ=60)
AGCCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGG < SRR4302533.4211646/94‑1 (MQ=60)
CCTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGC > SRR4302533.4057848/1‑94 (MQ=60)
CTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCC > SRR4302533.4642188/1‑94 (MQ=60)
CTTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCC > SRR4302533.3102600/1‑94 (MQ=60)
TTTACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCA < SRR4302533.908742/94‑1 (MQ=60)
ACCCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATG > SRR4302533.3796503/1‑94 (MQ=60)
CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT > SRR4302533.1520527/1‑94 (MQ=60)
CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGT > SRR4302533.2144820/1‑94 (MQ=60)
CCAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGA > SRR4302533.1608006/1‑94 (MQ=60)
CAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTA > SRR4302533.3542309/1‑94 (MQ=60)
CAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTA > SRR4302533.710468/1‑94 (MQ=60)
CAGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTA < SRR4302533.5981167/94‑1 (MQ=60)
AGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTAC < SRR4302533.2233632/94‑1 (MQ=60)
AGGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTAC < SRR4302533.3180547/94‑1 (MQ=60)
GGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACA < SRR4302533.4848716/94‑1 (MQ=60)
GGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACA < SRR4302533.3439011/94‑1 (MQ=60)
GGCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACA < SRR4302533.1538372/94‑1 (MQ=60)
GCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG < SRR4302533.6108308/94‑1 (MQ=60)
GCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG > SRR4302533.4221821/1‑94 (MQ=60)
|
GCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAG > NC_000913/3911674‑3911860
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
