Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,913,076	(G)_6→7	intergenic (‑248/+105)	glmU ← / ← atpC	N‑acetyl glucosamine‑1‑phosphate uridyltransferase/membrane‑bound ATP synthase, F1 sector, epsilon‑subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,913,070	1	.	G	95.5%	1817.9 / 67.3	581	intergenic (‑242/+111)	glmU/atpC	N‑acetyl glucosamine‑1‑phosphate uridyltransferase/membrane‑bound ATP synthase, F1 sector, epsilon‑subunit
Reads supporting (aligned to +/- strand): ref base . (12/14); new base G (247/308); total (259/322)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 682 total aligned reads displayed.

CTTTTGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGG  >  NC_000913/3912978‑3913157

cTTTTGTCTGCAGAATATTAAGGCAGTACCTTACTTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACa                                                                                            <  1:8959787/93‑1 (MQ=255)

cTTTTGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACa                                                                                            >  2:9849336/1‑93 (MQ=255)

cTTTTGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACa                                                                                            <  1:2451187/93‑1 (MQ=255)

 ttttGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑g                                                                                         >  2:794754/1‑93 (MQ=255)

 ttttGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑g                                                                                         >  2:550027/1‑93 (MQ=255)

 ttttGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGGCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑g                                                                                         >  2:5276721/1‑93 (MQ=255)

  tttGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑gg                                                                                        >  2:9432818/1‑93 (MQ=255)

  tttGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑gg                                                                                        >  2:1298400/1‑93 (MQ=255)

    tgtgtgCAGAAAATTAAGGCAGTACCTTAAGTTAAGCGTCAGGTTGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑gggg                                                                                      <  1:3030259/93‑1 (MQ=255)

    tGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑gggg                                                                                      <  1:10010930/93‑1 (MQ=255)

     gTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑ggggg                                                                                     <  1:3719204/93‑1 (MQ=255)

          cAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGGGGgttt                                                                                >  2:3347163/1‑93 (MQ=255)

            gAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGGGGgtttta                                                                              >  1:2690280/1‑91 (MQ=255)

             aaaaTTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTtat                                                                              <  2:6797008/93‑1 (MQ=255)

              aaaTTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTtata                                                                             >  1:1550643/1‑93 (MQ=255)

               aaTTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTatat                                                                            >  1:7346899/1‑93 (MQ=255)

                aTTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATc                                                                           >  2:6198645/1‑93 (MQ=255)

                 ttAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATca                                                                          <  1:4549876/93‑1 (MQ=255)

                  tAAGGCAGTACCTTAATTTAAGCGTCAGGGGGATGTTTGTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATcag                                                                         <  1:6024245/93‑1 (MQ=255)

                   aaGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATcagc                                                                        <  2:8315920/93‑1 (MQ=255)

                     ggCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATcagcag                                                                      <  2:2374115/93‑1 (MQ=255)

                       cAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGa                                                                    >  2:5839839/1‑93 (MQ=255)

                       cAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGa                                                                    <  1:815614/93‑1 (MQ=255)

                       cAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGa                                                                    <  1:8852085/93‑1 (MQ=255)

                        aGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGAt                                                                   >  2:9804522/1‑93 (MQ=255)

                        aGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGAt                                                                   >  1:8003432/1‑93 (MQ=255)

                           aCCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTTTATCAGCAGGATCTa                                                                >  1:5366422/1‑93 (MQ=255)

                           aCCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTa                                                                <  2:1461695/93‑1 (MQ=255)

                           aCCTTAATTTAAGCGTCAGGCGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGCAAACAG‑GGGGGGTTTTATATCAGCAGGATCTa                                                                >  1:7651341/1‑93 (MQ=255)

                            ccTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTAt                                                               >  1:5812488/1‑93 (MQ=255)

                            ccTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTAt                                                               <  2:2594286/93‑1 (MQ=255)

                            ccTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTAt                                                               <  2:2796433/93‑1 (MQ=255)

                             cTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGATTTATATCAGCAGGGTCTAtg                                                              >  2:7766346/1‑93 (MQ=255)

                              ttAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTAtgt                                                             <  1:9750632/93‑1 (MQ=255)

                              ttAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTAtgt                                                             >  1:1732397/1‑93 (MQ=255)

                              ttAATTTAAGCGTCAGGTGGATGGTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTAtgt                                                             <  1:8092269/93‑1 (MQ=255)

                                 aTTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGaa                                                          <  2:1157687/93‑1 (MQ=255)

                                  tttAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAAc                                                         >  1:2550093/1‑93 (MQ=255)

                                   ttAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGGTTTATATTTGCGGGATCTAtttgtgtg                                                        >  2:8749117/1‑89 (MQ=255)

                                     aaGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCt                                                      <  1:4226751/93‑1 (MQ=255)

                                      aGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTa                                                     >  2:1903794/1‑93 (MQ=255)

                                      aGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTa                                                     <  2:3228680/93‑1 (MQ=255)

                                         gttaGGTGGATGTTTTTGCTCTTATTTAGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTc                                                  <  1:8437774/90‑1 (MQ=255)

                                          tCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATTAGCAGGATCTATGTGAACGCTATTCa                                                 <  2:7512553/93‑1 (MQ=255)

                                          tCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCa                                                 >  2:9678922/1‑93 (MQ=255)

                                          tCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCa                                                 >  2:10016056/1‑93 (MQ=255)

                                           cAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAg                                                <  2:3554911/93‑1 (MQ=255)

                                            aGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAgg                                               >  2:573532/1‑93 (MQ=255)

                                            aGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAgg                                               >  1:9094326/1‑93 (MQ=255)

                                            aGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGa                                              <  1:6617054/93‑1 (MQ=255)

                                             ggTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGa                                              <  1:289567/93‑1 (MQ=255)

                                              gTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAc                                             >  2:9170706/1‑93 (MQ=255)

                                              gTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAc                                             <  2:3462985/93‑1 (MQ=255)

                                              gTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAc                                             <  2:4068490/93‑1 (MQ=255)

                                               tGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACg                                            <  1:9545276/93‑1 (MQ=255)

                                               tGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACg                                            <  2:1762929/93‑1 (MQ=255)

                                                ggATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACgg                                           >  2:5904834/1‑93 (MQ=255)

                                                ggATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACgg                                           >  1:2097248/1‑93 (MQ=255)

                                                 gATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACggg                                          <  1:331289/93‑1 (MQ=255)

                                                   tGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTc                                        <  1:5109023/93‑1 (MQ=255)

                                                   tGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGATTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTc                                        >  1:7838809/1‑93 (MQ=255)

                                                    gTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTca                                       <  1:226266/93‑1 (MQ=255)

                                                    gTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTca                                       >  2:9017297/1‑93 (MQ=255)

                                                    gTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTca                                       >  1:1902880/1‑93 (MQ=255)

                                                     tttttGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTcac                                      >  1:7191703/1‑93 (MQ=255)

                                                      ttttGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTcaca                                     >  1:6350481/1‑93 (MQ=255)

                                                        ttGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAcg                                   <  2:5023917/93‑1 (MQ=255)

                                                         tGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAcgc                                  >  2:8231587/1‑93 (MQ=255)

                                                         tGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAcgc                                  <  1:6204414/93‑1 (MQ=255)

                                                             ctTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑aa                             <  2:3680164/93‑1 (MQ=255)

                                                              ttATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑aaa                            >  1:9282642/1‑93 (MQ=255)

                                                               tATTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑aaaa                           >  2:3799550/1‑93 (MQ=255)

                                                                aTTTCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑aaaaa                          >  2:9291535/1‑93 (MQ=255)

                                                                 tttCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑aaaaaa                         <  1:7453563/93‑1 (MQ=255)

                                                                  ttCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑aaaaaaa                        <  1:5204592/93‑1 (MQ=255)

                                                                   tCGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑aaaaaaaa                       <  1:8260939/93‑1 (MQ=255)

                                                                   tCGATCAATGAATAAACAGGAAAACA‑‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAag                      >  2:647546/1‑93 (MQ=255)

                                                                    cGATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAag                      >  1:4346400/1‑93 (MQ=255)

                                                                     gATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAagc                     <  2:8430045/93‑1 (MQ=255)

                                                                     gATCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAagc                     >  1:35173/1‑93 (MQ=255)

                                                                       tCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAagcca                   <  2:4761037/93‑1 (MQ=255)

                                                                       tCAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAagcca                   >  1:9638173/1‑93 (MQ=255)

                                                                        cAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAagccag                  <  2:4445418/93‑1 (MQ=255)

                                                                        cAATGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAagccag                  <  1:6819776/93‑1 (MQ=255)

                                                                         aaTGAATAAACAGGAAAACAGGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAACAAagccag                  >  2:5964789/1‑93 (MQ=255)

                                                                         aaTGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAagccagc                 <  1:6971773/93‑1 (MQ=255)

                                                                          aTGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAagccagc                 >  1:563801/1‑93 (MQ=255)

                                                                          aTGAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAagccagcc                <  1:3873666/93‑1 (MQ=255)

                                                                           tGAATAAACAGGAAAACAGGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAagccagcc                <  2:4294643/93‑1 (MQ=255)

                                                                            gAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTg              >  1:8533078/1‑93 (MQ=255)

                                                                            gAATAAACAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTg              <  2:6910389/93‑1 (MQ=255)

                                                                              aTAAACAGGAAAACAG‑GGGGGGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGtt            >  1:5915459/1‑93 (MQ=255)

                                                                                aaaCAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTc          <  2:5182296/93‑1 (MQ=255)

                                                                                 aaCAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTcc         >  1:4644112/1‑93 (MQ=255)

                                                                                  aCAGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGCGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCa        >  1:4779662/1‑93 (MQ=255)

                                                                                    aGGAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGa      <  2:2112593/93‑1 (MQ=255)

                                                                                     ggAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGAc     >  2:7416277/1‑93 (MQ=255)

                                                                                     ggAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGAc     <  2:7154174/93‑1 (MQ=255)

                                                                                      gAAAACAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCTAGCCTGTTTCCAGACt    <  2:6704007/93‑1 (MQ=255)

                                                                                        aaaCAG‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTgg  <  1:11568/93‑1 (MQ=255)

CTTTTGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGG  >  NC_000913/3912978‑3913157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 343 total aligned reads displayed.

GTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTT  >  NC_000913/3912983‑3913169

GTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGG‑GG                                                                                                <  SRR4302540.4683899/94‑1 (MQ=60)

GTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGG‑GG                                                                                                >  SRR4302540.8317980/1‑94 (MQ=60)

GTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGG‑GG                                                                                                <  SRR4302540.3759785/94‑1 (MQ=60)

GTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGG‑GG                                                                                                <  SRR4302540.3916467/94‑1 (MQ=60)

  CTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGG‑GGGT                                                                                              >  SRR4302540.6698349/1‑94 (MQ=60)

   TGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGG‑GGGTT                                                                                             <  SRR4302540.4307757/94‑1 (MQ=60)

   TGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGG‑GGGTT                                                                                             <  SRR4302540.3703819/94‑1 (MQ=60)

   TGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGG‑GGGTT                                                                                             <  SRR4302540.622448/94‑1 (MQ=60)

     CAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTT                                                                                            >  SRR4302540.6944924/1‑94 (MQ=60)

      AGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTA                                                                                           <  SRR4302540.5091051/94‑1 (MQ=60)

      AGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTA                                                                                           >  SRR4302540.6404468/1‑94 (MQ=60)

      AGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTA                                                                                           >  SRR4302540.2719346/1‑94 (MQ=60)

       GAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTAT                                                                                          <  SRR4302540.2379480/94‑1 (MQ=60)

       AAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTTGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTAT                                                                                          <  SRR4302540.6349300/94‑1 (MQ=60)

        AAAATTAAGGGAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAAAGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATA                                                                                         >  SRR4302540.2012628/1‑94 (MQ=60)

        AAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATA                                                                                         >  SRR4302540.2012627/1‑94 (MQ=60)

        AAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATA                                                                                         >  SRR4302540.8204751/1‑94 (MQ=60)

         AAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGGTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATAT                                                                                        <  SRR4302540.3498365/94‑1 (MQ=60)

         AAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATAT                                                                                        <  SRR4302540.2504490/94‑1 (MQ=60)

         AAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATAT                                                                                        >  SRR4302540.3400925/1‑94 (MQ=60)

           ATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCA                                                                                      >  SRR4302540.724676/1‑94 (MQ=60)

           ATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCA                                                                                      >  SRR4302540.9153979/1‑94 (MQ=60)

           ATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCA                                                                                      <  SRR4302540.8425453/94‑1 (MQ=60)

           ATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCA                                                                                      <  SRR4302540.3039953/94‑1 (MQ=60)

             TAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGC                                                                                    <  SRR4302540.7900665/94‑1 (MQ=60)

             TAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGC                                                                                    <  SRR4302540.6091086/94‑1 (MQ=60)

              AAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCA                                                                                   <  SRR4302540.7389199/94‑1 (MQ=60)

               AGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAG                                                                                  <  SRR4302540.2047859/94‑1 (MQ=60)

               AGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAG                                                                                  <  SRR4302540.7792497/94‑1 (MQ=60)

                GGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGG‑GGTTTTATATCAGCAG                                                                                  >  SRR4302540.6133449/1‑94 (MQ=60)

                GGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGG                                                                                 <  SRR4302540.3612930/94‑1 (MQ=60)

                  CAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGAT                                                                               >  SRR4302540.8096574/1‑94 (MQ=60)

                  CAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGAT                                                                               <  SRR4302540.8394370/94‑1 (MQ=60)

                  CAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGAT                                                                               <  SRR4302540.824280/94‑1 (MQ=60)

                  CAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGGTTTATATCAGCAGGAT                                                                               >  SRR4302540.5991357/1‑94 (MQ=60)

                  CAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAAAA‑‑GGGG‑GGGGTTATATCAGCAGGATC                                                                              >  SRR4302540.229379/1‑94 (MQ=60)

                  CAGTACCTTAAGTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGAT                                                                               <  SRR4302540.824278/94‑1 (MQ=60)

                   AGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATC                                                                              <  SRR4302540.6722863/94‑1 (MQ=60)

                   AGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATC                                                                              <  SRR4302540.7964397/94‑1 (MQ=60)

                    GTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCT                                                                             <  SRR4302540.5885392/94‑1 (MQ=60)

                     TACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTA                                                                            <  SRR4302540.2984472/94‑1 (MQ=60)

                     TACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTA                                                                            >  SRR4302540.7737202/1‑94 (MQ=60)

                     TACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTA                                                                            >  SRR4302540.7482749/1‑94 (MQ=60)

                     TACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTA                                                                            >  SRR4302540.3875215/1‑94 (MQ=60)

                      ACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTAT                                                                           <  SRR4302540.4560729/94‑1 (MQ=60)

                      ACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTAT                                                                           <  SRR4302540.3087123/94‑1 (MQ=60)

                      ACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTAT                                                                           <  SRR4302540.5913044/94‑1 (MQ=60)

                       CCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATG                                                                          >  SRR4302540.5995281/1‑94 (MQ=60)

                        CTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGT                                                                         >  SRR4302540.3175587/1‑94 (MQ=60)

                        CTTAATTTAAGCGGCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGT                                                                         <  SRR4302540.1864026/94‑1 (MQ=60)

                         TTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTG                                                                        <  SRR4302540.9865050/94‑1 (MQ=60)

                         TTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTG                                                                        <  SRR4302540.8051620/94‑1 (MQ=60)

                         TTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTG                                                                        <  SRR4302540.8646311/94‑1 (MQ=60)

                         TTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTG                                                                        <  SRR4302540.94142/94‑1 (MQ=60)

                         TTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTG                                                                        <  SRR4302540.2628522/94‑1 (MQ=60)

                         TTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTG                                                                        <  SRR4302540.2628523/94‑1 (MQ=60)

                         TTAATTTAAGCGTCAGGTGGATGGTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTG                                                                        <  SRR4302540.8186204/94‑1 (MQ=60)

                          TAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGA                                                                       >  SRR4302540.9854523/1‑94 (MQ=60)

                          TAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGATTTATATCAGCAGGATCTATGTGA                                                                       >  SRR4302540.5485087/1‑94 (MQ=60)

                           AATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAA                                                                      <  SRR4302540.3809162/94‑1 (MQ=60)

                           AATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAA                                                                      >  SRR4302540.1694561/1‑94 (MQ=60)

                            ATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAAC                                                                     >  SRR4302540.282143/1‑94 (MQ=60)

                            ATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAAC                                                                     <  SRR4302540.2843611/94‑1 (MQ=60)

                            ATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAAC                                                                     >  SRR4302540.3992575/1‑94 (MQ=60)

                            ATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAAC                                                                     <  SRR4302540.2259580/94‑1 (MQ=60)

                            ATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAAC                                                                     <  SRR4302540.500361/94‑1 (MQ=60)

                            ATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAAC                                                                     >  SRR4302540.8557187/1‑94 (MQ=60)

                            ATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATAAGCAGGATCTATGTGAAC                                                                     >  SRR4302540.2954477/1‑94 (MQ=60)

                            ATGTAAGCGTCAGGTGGAGGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAAC                                                                     <  SRR4302540.7199047/94‑1 (MQ=60)

                             TTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACG                                                                    >  SRR4302540.6446016/1‑94 (MQ=60)

                               TAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCT                                                                  <  SRR4302540.3278188/94‑1 (MQ=60)

                               TAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCT                                                                  <  SRR4302540.9074046/94‑1 (MQ=60)

                                AAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTA                                                                 <  SRR4302540.5979446/94‑1 (MQ=60)

                                AAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTA                                                                 <  SRR4302540.2236196/94‑1 (MQ=60)

                                 AGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTAT                                                                >  SRR4302540.9700940/1‑94 (MQ=60)

                                   CGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTC                                                              <  SRR4302540.41985/94‑1 (MQ=60)

                                   CGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTC                                                              >  SRR4302540.4764052/1‑94 (MQ=60)

                                    GTTAGGTGGATGTTTTTGCTCTTATTTAGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCA                                                             <  SRR4302540.8535730/94‑1 (MQ=60)

                                    GTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCG                                                             >  SRR4302540.3531001/1‑94 (MQ=60)

                                    GTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCA                                                             >  SRR4302540.9416438/1‑94 (MQ=60)

                                    GTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCA                                                             >  SRR4302540.10023868/1‑94 (MQ=60)

                                    GTCAGGTGGAGGTTTTTGTTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCA                                                             <  SRR4302540.5260328/94‑1 (MQ=60)

                                     TCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAG                                                            <  SRR4302540.1529930/94‑1 (MQ=60)

                                     TCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAG                                                            <  SRR4302540.1529633/94‑1 (MQ=60)

                                     GCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAG                                                            <  SRR4302540.5932622/94‑1 (MQ=60)

                                     GCAGGTGGATGTTGTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAG                                                            <  SRR4302540.2157934/94‑1 (MQ=60)

                                      CAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGG                                                           >  SRR4302540.9203588/1‑94 (MQ=60)

                                      CAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGG                                                           >  SRR4302540.5735953/1‑94 (MQ=60)

                                      CAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGG                                                           <  SRR4302540.5612044/94‑1 (MQ=60)

                                       AGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGA                                                          >  SRR4302540.6369344/1‑94 (MQ=60)

                                       AGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGA                                                          >  SRR4302540.4495348/1‑94 (MQ=60)

                                       AGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGA                                                          >  SRR4302540.3447252/1‑94 (MQ=60)

                                        GGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAC                                                         <  SRR4302540.292427/94‑1 (MQ=60)

                                        GGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAC                                                         <  SRR4302540.6826056/94‑1 (MQ=60)

                                        GGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAC                                                         <  SRR4302540.8536226/94‑1 (MQ=60)

                                        GGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAC                                                         <  SRR4302540.2636662/94‑1 (MQ=60)

                                        GGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAC                                                         >  SRR4302540.2792690/1‑94 (MQ=60)

                                        GGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAC                                                         >  SRR4302540.7722928/1‑94 (MQ=60)

                                        GGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAG                                                         >  SRR4302540.1841277/1‑94 (MQ=60)

                                        GGTGGATGTTGTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAC                                                         <  SRR4302540.895505/94‑1 (MQ=60)

                                         GTGGATTTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACG                                                        <  SRR4302540.7333682/94‑1 (MQ=60)

                                         GTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAC                                                         <  SRR4302540.7840351/94‑1 (MQ=60)

                                         GTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACG                                                        <  SRR4302540.4627731/94‑1 (MQ=60)

                                         GTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACG                                                        <  SRR4302540.9291341/94‑1 (MQ=60)

                                         GTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACG                                                        <  SRR4302540.4627730/94‑1 (MQ=60)

                                         GTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACG                                                        >  SRR4302540.8777817/1‑94 (MQ=60)

                                          taatTGTTTTTGCTATTATTTCGATCAATGAATAAACAAAAAAACA‑‑GGGGAAATTTTATATAAGCAGGATCTATGTGAACGCTATTCAGGACGG                                                       <  SRR4302540.9025570/90‑1 (MQ=60)

                                          TGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGG                                                       >  SRR4302540.9034847/1‑94 (MQ=60)

                                          TGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGG                                                       <  SRR4302540.9658213/94‑1 (MQ=60)

                                          TGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGG                                                       <  SRR4302540.9313381/94‑1 (MQ=60)

                                          TGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGG                                                       >  SRR4302540.3939617/1‑94 (MQ=60)

                                          TGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGG                                                       >  SRR4302540.2119765/1‑94 (MQ=60)

                                           GGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGG                                                      <  SRR4302540.1866561/94‑1 (MQ=60)

                                           GGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGG                                                      <  SRR4302540.8564/94‑1 (MQ=60)

                                            GATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGTAAAACA‑‑GGGGTGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGT                                                     <  SRR4302540.6969761/94‑1 (MQ=60)

                                            GATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGT                                                     <  SRR4302540.4316044/94‑1 (MQ=60)

                                            GATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGT                                                     <  SRR4302540.334616/94‑1 (MQ=60)

                                             ATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTC                                                    >  SRR4302540.4678898/1‑94 (MQ=60)

                                             ATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTC                                                    >  SRR4302540.4789287/1‑94 (MQ=60)

                                             ATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTC                                                    >  SRR4302540.5191313/1‑94 (MQ=60)

                                             ATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTC                                                    <  SRR4302540.2519903/94‑1 (MQ=60)

                                             ATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTC                                                    >  SRR4302540.825653/1‑94 (MQ=60)

                                             ATGTTTTTACTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTC                                                    >  SRR4302540.1932165/1‑94 (MQ=60)

                                              TGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCA                                                   >  SRR4302540.5842385/1‑94 (MQ=60)

                                              TGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCA                                                   >  SRR4302540.969800/1‑94 (MQ=60)

                                              TGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCA                                                   <  SRR4302540.5164321/94‑1 (MQ=60)

                                              TGTTTTTGCTCTTATTTCGATCAATGAATAAACAGAAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCA                                                   <  SRR4302540.9334854/94‑1 (MQ=60)

                                               TTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCAC                                                  <  SRR4302540.8156419/94‑1 (MQ=60)

                                               GTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCAC                                                  <  SRR4302540.228454/94‑1 (MQ=60)

                                               GTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCAC                                                  >  SRR4302540.7271865/1‑94 (MQ=60)

                                                TTTTTGTTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACA                                                 <  SRR4302540.9412162/94‑1 (MQ=60)

                                                TTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACA                                                 <  SRR4302540.2496317/94‑1 (MQ=60)

                                                TTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACA                                                 <  SRR4302540.9806410/94‑1 (MQ=60)

                                                TTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACA                                                 >  SRR4302540.6421205/1‑94 (MQ=60)

                                                 TTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC                                                <  SRR4302540.7011798/94‑1 (MQ=60)

                                                 TTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC                                                <  SRR4302540.3872054/94‑1 (MQ=60)

                                                 TTTTGCTCTTATGGCGATCAAAGAATAAACAGGAAAACA‑‑GGGGTGGTTTTATATCAGCATGATCTATGTGAACTCTATTCAGGACGGGTCTCAC                                                <  SRR4302540.7997096/94‑1 (MQ=60)

                                                  TTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACG                                               >  SRR4302540.5243162/1‑94 (MQ=60)

                                                   TTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGC                                              <  SRR4302540.1739051/94‑1 (MQ=60)

                                                    TGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCG                                             >  SRR4302540.2676960/1‑94 (MQ=60)

                                                    TGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCG                                             <  SRR4302540.6273476/94‑1 (MQ=60)

                                                    TGCTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCG                                             <  SRR4302540.6273475/94‑1 (MQ=60)

                                                      CTCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑A                                          >  SRR4302540.8446904/1‑94 (MQ=60)

                                                       TCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AA                                         >  SRR4302540.9178167/1‑94 (MQ=60)

                                                       TCTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AA                                         >  SRR4302540.8336724/1‑94 (MQ=60)

                                                        CTTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAA                                        <  SRR4302540.6077536/94‑1 (MQ=60)

                                                         TTATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAA                                       >  SRR4302540.7397774/1‑94 (MQ=60)

                                                           ATTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAA                                     >  SRR4302540.1100666/1‑94 (MQ=60)

                                                            TTTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAA                                    <  SRR4302540.7536662/94‑1 (MQ=60)

                                                             TTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAA                                   >  SRR4302540.5759429/1‑94 (MQ=60)

                                                             TTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAA                                   <  SRR4302540.7476877/94‑1 (MQ=60)

                                                             TTCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAA                                   <  SRR4302540.5261281/94‑1 (MQ=60)

                                                              TCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAG                                  >  SRR4302540.4393695/1‑94 (MQ=60)

                                                              TCGATCAATGAATAAACAGGAAAACAG‑GGGG‑GGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAG                                  <  SRR4302540.9789639/94‑1 (MQ=60)

                                                                 ATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCA                               <  SRR4302540.7741861/94‑1 (MQ=60)

                                                                 ATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCA                               <  SRR4302540.8874536/94‑1 (MQ=60)

                                                                 ATCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCA                               >  SRR4302540.9751715/1‑94 (MQ=60)

                                                                  TCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAG                              >  SRR4302540.4738871/1‑94 (MQ=60)

                                                                  TCAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAG                              <  SRR4302540.9703957/94‑1 (MQ=60)

                                                                   CAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGC                             >  SRR4302540.240948/1‑94 (MQ=60)

                                                                   CAATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGC                             <  SRR4302540.6895270/94‑1 (MQ=60)

                                                                    AATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAAGCCAGC                             >  SRR4302540.569930/1‑94 (MQ=60)

                                                                     ATGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCT                           >  SRR4302540.8173104/1‑94 (MQ=60)

                                                                      TGAATAAACAGGAAAACAGGGGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCT                           >  SRR4302540.9313974/1‑94 (MQ=60)

                                                                      TGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTG                          >  SRR4302540.3883750/1‑94 (MQ=60)

                                                                      TGAATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTG                          >  SRR4302540.8632220/1‑94 (MQ=60)

                                                                        AATAACCATGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGACCGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTT                        <  SRR4302540.5385735/94‑1 (MQ=60)

                                                                         ATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTT                       <  SRR4302540.5543842/94‑1 (MQ=60)

                                                                         ATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTT                       <  SRR4302540.668372/94‑1 (MQ=60)

                                                                         ATAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTT                       >  SRR4302540.164638/1‑94 (MQ=60)

                                                                          TAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTC                      <  SRR4302540.6466564/94‑1 (MQ=60)

                                                                          TAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTC                      <  SRR4302540.5277055/94‑1 (MQ=60)

                                                                          TAAACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTC                      <  SRR4302540.6436959/94‑1 (MQ=60)

                                                                            AACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCA                    >  SRR4302540.4830743/1‑94 (MQ=60)

                                                                             ACAGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAG                   <  SRR4302540.4500255/94‑1 (MQ=60)

                                                                               AGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGAC                 <  SRR4302540.10023147/94‑1 (MQ=60)

                                                                               AGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGAC                 <  SRR4302540.8328921/94‑1 (MQ=60)

                                                                               AGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGAC                 <  SRR4302540.1266605/94‑1 (MQ=60)

                                                                               AGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGAC                 <  SRR4302540.7615267/94‑1 (MQ=60)

                                                                               AGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGAC                 >  SRR4302540.7461539/1‑94 (MQ=60)

                                                                               AGGAAAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTAAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGAC                 >  SRR4302540.1040318/1‑94 (MQ=60)

                                                                                   AAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGC             <  SRR4302540.5423320/94‑1 (MQ=60)

                                                                                   AAACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGC             <  SRR4302540.11690/94‑1 (MQ=60)

                                                                                     ACAG‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTT           <  SRR4302540.5790885/94‑1 (MQ=60)

                                                                                       cagGGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTT          >  SRR4302540.1575530/4‑94 (MQ=60)

                                                                                       cagGGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTT          <  SRR4302540.1062491/91‑1 (MQ=60)

                                                                                       G‑‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTG        >  SRR4302540.2964580/1‑94 (MQ=60)

                                                                                       G‑‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTG        <  SRR4302540.9216337/94‑1 (MQ=60)

                                                                                       G‑‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTG        <  SRR4302540.6053760/94‑1 (MQ=60)

                                                                                       G‑‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTG        <  SRR4302540.4889034/94‑1 (MQ=60)

                                                                                        agGGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTT         >  SRR4302540.3295675/3‑94 (MQ=60)

                                                                                        agGGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTT         >  SRR4302540.8678252/3‑94 (MQ=60)

                                                                                          GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGT       >  SRR4302540.2696015/1‑94 (MQ=60)

                                                                                           GGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTG      >  SRR4302540.8002878/1‑94 (MQ=60)

                                                                                            GG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGC     >  SRR4302540.4278948/1‑94 (MQ=60)

                                                                                            GG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGC     <  SRR4302540.4385121/94‑1 (MQ=60)

                                                                                            GG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGC     >  SRR4302540.7794102/1‑94 (MQ=60)

                                                                                               GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTT   <  SRR4302540.9114685/94‑1 (MQ=60)

                                                                                               GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTT   <  SRR4302540.5419866/94‑1 (MQ=60)

                                                                                               GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTT   <  SRR4302540.822005/94‑1 (MQ=60)

GTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑‑GGGG‑GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC‑AAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTT  >  NC_000913/3912983‑3913169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`