Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,915,043 G→C A284G (GCC→GGC)  atpG ← membrane‑bound ATP synthase, F1 sector, gamma‑subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,915,0430GC99.8% 1382.3 / ‑5.0 447A284G (GCC→GGC) atpGmembrane‑bound ATP synthase, F1 sector, gamma‑subunit
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (218/228);  total (218/229)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.70e-01

Only 100 of 483 total aligned reads displayed.

ATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑GCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCG  >  NC_000913/3914952‑3915132
                                                                                            |                                                                                         
aTTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCggcg‑gc                                                                                          <  1:6635616/93‑1 (MQ=255)
 ttCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑ccc                                                                                         >  2:6581901/1‑93 (MQ=255)
   cGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑Ccccc                                                                                       <  2:8429445/93‑1 (MQ=255)
    gACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑cccccc                                                                                      <  2:7017802/93‑1 (MQ=255)
      cGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCga                                                                                    <  1:4736424/93‑1 (MQ=255)
      cGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCga                                                                                    <  2:3166232/93‑1 (MQ=255)
        tCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCgaga                                                                                  <  1:1968689/93‑1 (MQ=255)
          aaCTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACg                                                                                >  2:6755460/1‑93 (MQ=255)
           aCTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGa                                                                               >  2:3323784/1‑93 (MQ=255)
           aCTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGa                                                                               <  1:9016519/93‑1 (MQ=255)
            cTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGAt                                                                              <  2:1556681/93‑1 (MQ=255)
            cTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGAt                                                                              >  2:626769/1‑93 (MQ=255)
             tACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGAtc                                                                             >  2:9736066/1‑93 (MQ=255)
              tcGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGAtct                                                                            <  1:3270394/92‑1 (MQ=255)
                ggCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAGCCGCGGCG‑CCCCCCGAGACGATCTCg                                                                          <  2:2271768/93‑1 (MQ=255)
                 gcgcCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCgg                                                                         <  2:4806995/93‑1 (MQ=255)
                   gcCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTg                                                                       <  2:2089972/93‑1 (MQ=255)
                    ccGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGa                                                                      <  1:9374877/93‑1 (MQ=255)
                     cGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTAAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAg                                                                     <  2:8793083/93‑1 (MQ=255)
                       aTTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGtt                                                                   >  1:9936088/1‑93 (MQ=255)
                          aCCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGTTGAGTTCCt                                                                >  1:6061364/1‑93 (MQ=255)
                          aCCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCt                                                                >  2:7353781/1‑93 (MQ=255)
                            cTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CGCGCCGAGACGATCTCGGTGAGTTGCTGa                                                              >  2:7895470/1‑93 (MQ=255)
                            cTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGa                                                              >  2:4446663/1‑93 (MQ=255)
                            cTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGa                                                              <  2:5646972/93‑1 (MQ=255)
                            cTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGa                                                              <  1:5523143/93‑1 (MQ=255)
                               gACATTCTGTCCATTAGCCAGCTTAAATCCTCTACGAAATAACCTGTTTAACCCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTTAGTa                                                           <  2:6139939/93‑1 (MQ=255)
                               gACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTa                                                           <  2:1362669/93‑1 (MQ=255)
                               gACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTa                                                           <  2:10012295/93‑1 (MQ=255)
                                aCAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTaa                                                          <  1:2780673/93‑1 (MQ=255)
                                aCAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTaa                                                          <  1:144315/93‑1 (MQ=255)
                                 cAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCGCCGAGACGAGCTCGGTGAGGTCCTGAGTact                                                         >  1:4407227/1‑91 (MQ=255)
                                 cAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAAt                                                         >  2:5959312/1‑93 (MQ=255)
                                   aTCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGc                                                       >  1:10037931/1‑93 (MQ=255)
                                   aTCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGc                                                       <  1:7020450/93‑1 (MQ=255)
                                    tCTTTCCAGTAGCCATCTTAAATCCTCTCCGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCt                                                      <  1:4924972/93‑1 (MQ=255)
                                    tCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGCGTAATGCt                                                      >  2:6902493/1‑93 (MQ=255)
                                    tCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCt                                                      <  1:7462159/93‑1 (MQ=255)
                                    tCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCt                                                      <  1:9637603/93‑1 (MQ=255)
                                       ttCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGc                                                   <  1:762467/93‑1 (MQ=255)
                                         tcAGTAGCAATCTTAAATACTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCt                                                 <  1:9842805/92‑1 (MQ=255)
                                         ccAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGCGAGTTCCTGAGTAATGCTGGCCt                                                 >  2:2338903/1‑93 (MQ=255)
                                          cAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTg                                                >  1:4625906/1‑93 (MQ=255)
                                           aGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGa                                               <  1:835092/93‑1 (MQ=255)
                                           aGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGa                                               <  1:5653629/93‑1 (MQ=255)
                                            gTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGAc                                              >  2:8935803/1‑93 (MQ=255)
                                            gTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGAc                                              <  2:3753040/93‑1 (MQ=255)
                                            gTAGCCATCTTAAATCCTCTACGAAATAACCTGTTAAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGAc                                              <  2:3014321/93‑1 (MQ=255)
                                              aGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGa                                            <  1:1671535/93‑1 (MQ=255)
                                               gCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAg                                           >  2:4644282/1‑93 (MQ=255)
                                                ccATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGc                                          <  1:2136570/93‑1 (MQ=255)
                                                 cATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCt                                         >  1:4108820/1‑93 (MQ=255)
                                                 cATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCt                                         <  1:30283/93‑1 (MQ=255)
                                                  aTCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCtt                                        <  1:7117728/93‑1 (MQ=255)
                                                   tCTTAAATCCTCTACGAAATAACCTGTTTAAGCCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCttt                                       <  2:4940163/93‑1 (MQ=255)
                                                   tCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCttt                                       >  1:3599505/1‑93 (MQ=255)
                                                   tCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCttt                                       >  1:8560248/1‑93 (MQ=255)
                                                   tCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCttt                                       >  2:918440/1‑93 (MQ=255)
                                                      tAAATCCTCTACGAAATAACCTGTTTAAGCCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgtt                                    <  2:1837515/93‑1 (MQ=255)
                                                       aaaTCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgttg                                   <  2:5783215/93‑1 (MQ=255)
                                                        aaTCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTtgttgt                                  >  2:8029027/1‑93 (MQ=255)
                                                        aaTCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTtgttgt                                  >  2:8637660/1‑93 (MQ=255)
                                                         aTCCTGTAGGACATACCCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGta                                 <  1:8141036/93‑1 (MQ=255)
                                                         aTCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGta                                 <  2:3664593/93‑1 (MQ=255)
                                                         aTCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGta                                 <  1:6168029/93‑1 (MQ=255)
                                                          tCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGtat                                >  1:3826345/1‑93 (MQ=255)
                                                          tCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGtat                                >  2:3852720/1‑93 (MQ=255)
                                                           ccTCTACGAAATAACCTGTTTAAGCCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGtata                               <  1:1118287/93‑1 (MQ=255)
                                                             tctACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATAcc                             >  2:2780011/1‑93 (MQ=255)
                                                             tctACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATAcc                             <  2:2553376/93‑1 (MQ=255)
                                                                 cGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACt                         <  1:7772217/93‑1 (MQ=255)
                                                                  gAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTg                        >  1:8623803/1‑93 (MQ=255)
                                                                    aaTATCCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCa                      <  2:9270132/93‑1 (MQ=255)
                                                                    aaTAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCa                      <  1:8823263/93‑1 (MQ=255)
                                                                    aaTAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGAAGAGCTTTGGTGTATACCAACTGCa                      >  2:172493/1‑93 (MQ=255)
                                                                     aTAACCTGTTTAAACCGCGGCGCCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCa                      >  1:5792794/1‑93 (MQ=255)
                                                                     aTAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAg                     >  1:4008061/1‑93 (MQ=255)
                                                                      tAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGc                    >  2:7679649/1‑93 (MQ=255)
                                                                        aCCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACTCACTGCAGctc                  >  1:7731498/1‑93 (MQ=255)
                                                                        aCCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGctc                  <  2:394141/93‑1 (MQ=255)
                                                                          cTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCtt                <  1:2565024/93‑1 (MQ=255)
                                                                           tGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCttt               >  2:5390474/1‑93 (MQ=255)
                                                                            gTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTa              <  1:4999775/93‑1 (MQ=255)
                                                                             tttAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTaa             >  1:8771817/1‑93 (MQ=255)
                                                                              ttAAGCGGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAAt            <  2:551072/93‑1 (MQ=255)
                                                                              ttAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAAt            >  2:9418125/1‑93 (MQ=255)
                                                                              taaaaCCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAAt            <  2:5064594/91‑1 (MQ=255)
                                                                               tAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATc           <  1:2218553/93‑1 (MQ=255)
                                                                               tAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATc           <  1:5391190/93‑1 (MQ=255)
                                                                                aaaCCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCa          >  1:9159349/1‑93 (MQ=255)
                                                                                aaaCCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCa          <  2:4248890/93‑1 (MQ=255)
                                                                                aaaCCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCa          <  1:2931764/93‑1 (MQ=255)
                                                                                  aCCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAgg        >  1:2431084/1‑93 (MQ=255)
                                                                                  aCCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAgg        >  2:5236264/1‑93 (MQ=255)
                                                                                    cgcgGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCt      <  1:6387123/93‑1 (MQ=255)
                                                                                    cgcgGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCt      >  1:1260493/1‑93 (MQ=255)
                                                                                     gcggcg‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTg     >  2:7249805/1‑93 (MQ=255)
                                                                                       ggcg‑ccCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTgcc   >  2:6398666/1‑93 (MQ=255)
                                                                                       ggcg‑ccCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTCGTTGTATACCAACTGCAGCTCTTTAATCAGGCTgcc   <  1:5191860/93‑1 (MQ=255)
                                                                                        gcg‑ccCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTgccg  >  1:6763958/1‑93 (MQ=255)
                                                                                            |                                                                                         
ATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑GCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCG  >  NC_000913/3914952‑3915132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 263 total aligned reads displayed.
GAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑GCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCAT  >  NC_000913/3914950‑3915136
                                                                                              |                                                                                             
GAATTCGACGTCAACTACGGCGCCGATTGCCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑C                                                                                               <  SRR4302540.3398824/94‑1 (MQ=60)
GAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑C                                                                                               >  SRR4302540.2428333/1‑94 (MQ=60)
GAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑C                                                                                               <  SRR4302540.1548608/94‑1 (MQ=60)
 AATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CC                                                                                              >  SRR4302540.4618298/1‑94 (MQ=60)
  ATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑GCC                                                                                             <  SRR4302540.6709051/94‑1 (MQ=60)
  ATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCC                                                                                             <  SRR4302540.8586679/94‑1 (MQ=60)
  ATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCC                                                                                             >  SRR4302540.559525/1‑94 (MQ=60)
  ATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCC                                                                                             >  SRR4302540.8067255/1‑94 (MQ=60)
   TTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCC                                                                                            <  SRR4302540.1308627/94‑1 (MQ=60)
    TCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCC                                                                                           >  SRR4302540.8929749/1‑94 (MQ=60)
     CGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCC                                                                                          >  SRR4302540.8875827/1‑94 (MQ=60)
        CGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAG                                                                                       <  SRR4302540.6215916/94‑1 (MQ=60)
        CGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAG                                                                                       <  SRR4302540.3677068/94‑1 (MQ=60)
        CGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAG                                                                                       <  SRR4302540.4786983/94‑1 (MQ=60)
         GTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGC                                                                                      >  SRR4302540.2847390/1‑94 (MQ=60)
         GTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGA                                                                                      >  SRR4302540.7814392/1‑94 (MQ=60)
          TCAGCGACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGAC                                                                                     <  SRR4302540.401544/94‑1 (MQ=60)
          TCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGAC                                                                                     <  SRR4302540.6935305/94‑1 (MQ=60)
          TCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGAC                                                                                     <  SRR4302540.2630234/94‑1 (MQ=60)
          TCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGAC                                                                                     <  SRR4302540.1990065/94‑1 (MQ=60)
          TCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGAC                                                                                     <  SRR4302540.6445593/94‑1 (MQ=60)
            AACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGA                                                                                   <  SRR4302540.2304034/94‑1 (MQ=60)
             ACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGAT                                                                                  <  SRR4302540.9124710/94‑1 (MQ=60)
             ACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGCTTAAACCGCGGCG‑CCCCCCGAGACGAT                                                                                  >  SRR4302540.782523/1‑94 (MQ=60)
               TACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAACTAACCTGTTTAAACCGCGACG‑CCCCCCGAcactctct                                                                                >  SRR4302540.1870620/1‑86 (MQ=60)
                TCGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTC                                                                               <  SRR4302540.3306089/94‑1 (MQ=60)
                ACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTC                                                                               >  SRR4302540.9054793/1‑94 (MQ=60)
                ACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTC                                                                               >  SRR4302540.4012127/1‑94 (MQ=60)
                ACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTC                                                                               <  SRR4302540.5337018/94‑1 (MQ=60)
                 CGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCG                                                                              <  SRR4302540.1184820/94‑1 (MQ=60)
                   GCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGT                                                                            <  SRR4302540.8887134/94‑1 (MQ=60)
                   GCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGT                                                                            <  SRR4302540.7734378/94‑1 (MQ=60)
                   GCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGT                                                                            <  SRR4302540.1589061/94‑1 (MQ=60)
                    GGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTGTACGAAATACCCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTG                                                                           <  SRR4302540.5187422/94‑1 (MQ=60)
                    CGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTG                                                                           <  SRR4302540.4327082/94‑1 (MQ=60)
                     GCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGA                                                                          >  SRR4302540.6141640/1‑94 (MQ=60)
                     GCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGA                                                                          <  SRR4302540.71609/94‑1 (MQ=60)
                      CCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAG                                                                         <  SRR4302540.9486477/94‑1 (MQ=60)
                       CGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCGCCGAGACGATCTCGGTGAGT                                                                        >  SRR4302540.2964166/1‑94 (MQ=60)
                       CGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGT                                                                        >  SRR4302540.5500076/1‑94 (MQ=60)
                        GATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTT                                                                       >  SRR4302540.10052038/1‑94 (MQ=60)
                         ATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTC                                                                      >  SRR4302540.4586836/1‑94 (MQ=60)
                         ATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTC                                                                      >  SRR4302540.8262592/1‑94 (MQ=60)
                           TACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATACCCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCT                                                                    <  SRR4302540.6573032/94‑1 (MQ=60)
                           TACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCCGAGACGATCTCGGTGAGTTCC                                                                     >  SRR4302540.258446/1‑94 (MQ=60)
                           TACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGTTGAGTTCCT                                                                    >  SRR4302540.6128730/1‑94 (MQ=60)
                           TACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCT                                                                    <  SRR4302540.3175832/94‑1 (MQ=60)
                           TACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCT                                                                    >  SRR4302540.5039407/1‑94 (MQ=60)
                           TACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCT                                                                    <  SRR4302540.9790757/94‑1 (MQ=60)
                            ACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTG                                                                   <  SRR4302540.4692543/94‑1 (MQ=60)
                            ACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTG                                                                   <  SRR4302540.3895623/94‑1 (MQ=60)
                            ACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGGGAGTTCCTG                                                                   >  SRR4302540.273643/1‑94 (MQ=60)
                             CCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGA                                                                  >  SRR4302540.1328837/1‑94 (MQ=60)
                             CCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGA                                                                  >  SRR4302540.1328836/1‑94 (MQ=60)
                              CTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAG                                                                 <  SRR4302540.5584209/94‑1 (MQ=60)
                              CTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAG                                                                 <  SRR4302540.5583962/94‑1 (MQ=60)
                              CTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAG                                                                 <  SRR4302540.3929378/94‑1 (MQ=60)
                               TGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGT                                                                <  SRR4302540.5824772/94‑1 (MQ=60)
                                GGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTA                                                               >  SRR4302540.8650254/1‑94 (MQ=60)
                                GGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTA                                                               >  SRR4302540.5394220/1‑94 (MQ=60)
                                GGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTA                                                               >  SRR4302540.6500827/1‑94 (MQ=60)
                                 GACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAA                                                              >  SRR4302540.2093273/1‑94 (MQ=60)
                                 GACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAA                                                              >  SRR4302540.8907694/1‑94 (MQ=60)
                                  ACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCGCCGAGACGAGCTCGGTGAGGTCCTGAGTACT                                                             >  SRR4302540.4455008/1‑94 (MQ=60)
                                  ACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAAT                                                             <  SRR4302540.5178232/94‑1 (MQ=60)
                                  ACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAAT                                                             <  SRR4302540.5626249/94‑1 (MQ=60)
                                  ACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAAT                                                             >  SRR4302540.5659398/1‑94 (MQ=60)
                                  ACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAAT                                                             >  SRR4302540.1757577/1‑94 (MQ=60)
                                  ACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAAT                                                             <  SRR4302540.942759/94‑1 (MQ=60)
                                  ACAATCTTGCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAAT                                                             <  SRR4302540.6752177/94‑1 (MQ=60)
                                    AATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGC                                                           <  SRR4302540.2179489/94‑1 (MQ=60)
                                    AATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGC                                                           >  SRR4302540.10154655/1‑94 (MQ=60)
                                    AATCTTTCCAGTAGCCATCTTAAATCCTCGTCGAAATAACGTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGC                                                           <  SRR4302540.7738873/94‑1 (MQ=60)
                                     ATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCT                                                          <  SRR4302540.3580107/94‑1 (MQ=60)
                                     ATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCT                                                          <  SRR4302540.7098423/94‑1 (MQ=60)
                                     ATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCT                                                          >  SRR4302540.2478449/1‑94 (MQ=60)
                                     ATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCT                                                          >  SRR4302540.10003701/1‑94 (MQ=60)
                                      TCTTTCCAGTAGCCATCTTAAATCCTCTCCGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTG                                                         <  SRR4302540.4978048/94‑1 (MQ=60)
                                      TCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTG                                                         <  SRR4302540.7160159/94‑1 (MQ=60)
                                      TCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTG                                                         <  SRR4302540.7545367/94‑1 (MQ=60)
                                      TCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTG                                                         <  SRR4302540.4978047/94‑1 (MQ=60)
                                      TCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTG                                                         <  SRR4302540.9751141/94‑1 (MQ=60)
                                      ACTTTCGAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTG                                                         <  SRR4302540.2332332/94‑1 (MQ=60)
                                       CTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATGTCGGTGAGTTCCTGAGTAATGCTGG                                                        >  SRR4302540.4117691/1‑94 (MQ=60)
                                       CTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGG                                                        <  SRR4302540.4088122/94‑1 (MQ=60)
                                        TTTCCACTAGCCATCTTAACTCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGC                                                       <  SRR4302540.125216/94‑1 (MQ=60)
                                         TTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCC                                                      <  SRR4302540.770579/94‑1 (MQ=60)
                                          TCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCT                                                     >  SRR4302540.5560898/1‑94 (MQ=60)
                                           TCAGTAGCAATCTTAAATACTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTG                                                    <  SRR4302540.9957866/94‑1 (MQ=60)
                                           CCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTG                                                    >  SRR4302540.4675470/1‑94 (MQ=60)
                                           CCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTG                                                    <  SRR4302540.6834932/94‑1 (MQ=60)
                                             AGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAAGCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGAC                                                  <  SRR4302540.5715876/94‑1 (MQ=60)
                                             AGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGAC                                                  <  SRR4302540.5715875/94‑1 (MQ=60)
                                             AGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGAC                                                  <  SRR4302540.843962/94‑1 (MQ=60)
                                             AGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGAC                                                  >  SRR4302540.7584538/1‑94 (MQ=60)
                                                AGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGGGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAG                                               >  SRR4302540.3797756/1‑94 (MQ=60)
                                                AGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAG                                               <  SRR4302540.1689713/94‑1 (MQ=60)
                                                  CCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCT                                             >  SRR4302540.4153167/1‑94 (MQ=60)
                                                  CCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCT                                             <  SRR4302540.2159516/94‑1 (MQ=60)
                                                   CATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTT                                            <  SRR4302540.30605/94‑1 (MQ=60)
                                                    ATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTT                                           <  SRR4302540.5178635/94‑1 (MQ=60)
                                                    ATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTT                                           >  SRR4302540.5034010/1‑94 (MQ=60)
                                                    ATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTT                                           >  SRR4302540.10032644/1‑94 (MQ=60)
                                                    ATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTT                                           <  SRR4302540.8045715/94‑1 (MQ=60)
                                                    ATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTT                                           <  SRR4302540.7196967/94‑1 (MQ=60)
                                                    ATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGCTCCTGAGCAATGCTGGCCTGACGAGCTGT                                           >  SRR4302540.4699749/1‑94 (MQ=60)
                                                     TCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTG                                          <  SRR4302540.7415463/94‑1 (MQ=60)
                                                      CTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGT                                         <  SRR4302540.7851077/94‑1 (MQ=60)
                                                       TTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTT                                        <  SRR4302540.8115997/94‑1 (MQ=60)
                                                        TAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTG                                       <  SRR4302540.8764357/94‑1 (MQ=60)
                                                         AAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGT                                      <  SRR4302540.4636382/94‑1 (MQ=60)
                                                          AATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTA                                     <  SRR4302540.2845552/94‑1 (MQ=60)
                                                           ATCCTGTAGGACATACCCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTAT                                    <  SRR4302540.8235529/94‑1 (MQ=60)
                                                           ATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTAT                                    >  SRR4302540.9354093/1‑94 (MQ=60)
                                                           ATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTAT                                    <  SRR4302540.8738152/94‑1 (MQ=60)
                                                           ATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTAT                                    >  SRR4302540.3867987/1‑94 (MQ=60)
                                                           ATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTAT                                    <  SRR4302540.6715648/94‑1 (MQ=60)
                                                           ATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTAT                                    <  SRR4302540.6236752/94‑1 (MQ=60)
                                                            TCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATA                                   >  SRR4302540.2815713/1‑94 (MQ=60)
                                                            TCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATA                                   >  SRR4302540.3191174/1‑94 (MQ=60)
                                                             CCTCTACGAAATAACCTGTTTAAGCCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATAC                                  <  SRR4302540.1129887/94‑1 (MQ=60)
                                                             CCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATAC                                  <  SRR4302540.9830167/94‑1 (MQ=60)
                                                             CCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATAC                                  >  SRR4302540.5804717/1‑94 (MQ=60)
                                                             CCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATAC                                  >  SRR4302540.214670/1‑94 (MQ=60)
                                                             CCTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATAC                                  >  SRR4302540.3843948/1‑94 (MQ=60)
                                                              CTCTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACC                                 <  SRR4302540.10114325/94‑1 (MQ=60)
                                                                CTACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAA                               >  SRR4302540.8691966/1‑94 (MQ=60)
                                                                 TACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAAC                              <  SRR4302540.1586393/94‑1 (MQ=60)
                                                                 TACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTACTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAAC                              <  SRR4302540.719289/94‑1 (MQ=60)
                                                                  ACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACT                             <  SRR4302540.648722/94‑1 (MQ=60)
                                                                  ACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACT                             <  SRR4302540.482544/94‑1 (MQ=60)
                                                                  ACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACT                             <  SRR4302540.2531501/94‑1 (MQ=60)
                                                                  ACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACT                             <  SRR4302540.8239324/94‑1 (MQ=60)
                                                                  ACGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACG                             >  SRR4302540.405493/1‑94 (MQ=60)
                                                                   CGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTG                            >  SRR4302540.8568462/1‑94 (MQ=60)
                                                                   CGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTG                            <  SRR4302540.7863078/94‑1 (MQ=60)
                                                                   CGAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTG                            >  SRR4302540.9486143/1‑94 (MQ=60)
                                                                    GAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGAGGAGCTTTGTTGTATACCAACTGA                           >  SRR4302540.7829039/1‑94 (MQ=60)
                                                                    GAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGC                           >  SRR4302540.8323612/1‑94 (MQ=60)
                                                                    GAAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGC                           >  SRR4302540.6257286/1‑94 (MQ=60)
                                                                     AAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCA                          <  SRR4302540.921049/94‑1 (MQ=60)
                                                                     AAATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCA                          >  SRR4302540.9125067/1‑94 (MQ=60)
                                                                      AATAACCTGTTTAAACCGCGGCGCCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCA                          >  SRR4302540.5856797/1‑94 (MQ=60)
                                                                      AATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAG                         >  SRR4302540.4051214/1‑94 (MQ=60)
                                                                      AATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAG                         <  SRR4302540.8925288/94‑1 (MQ=60)
                                                                      AATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAG                         >  SRR4302540.5858126/1‑94 (MQ=60)
                                                                       ATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGC                        >  SRR4302540.2242691/1‑94 (MQ=60)
                                                                       ATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGC                        >  SRR4302540.1230890/1‑94 (MQ=60)
                                                                       ATAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGC                        >  SRR4302540.8727477/1‑94 (MQ=60)
                                                                        TAACCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCT                       <  SRR4302540.4226548/94‑1 (MQ=60)
                                                                           CCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTT                    >  SRR4302540.4979279/1‑94 (MQ=60)
                                                                           CCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTT                    <  SRR4302540.616161/94‑1 (MQ=60)
                                                                           CCTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTT                    >  SRR4302540.9540650/1‑94 (MQ=60)
                                                                            CTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTT                   >  SRR4302540.6888047/1‑94 (MQ=60)
                                                                            CTGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTT                   <  SRR4302540.2592675/94‑1 (MQ=60)
                                                                             TGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTA                  <  SRR4302540.7220489/94‑1 (MQ=60)
                                                                             TGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTA                  >  SRR4302540.6056389/1‑94 (MQ=60)
                                                                             TGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTA                  >  SRR4302540.4739397/1‑94 (MQ=60)
                                                                             CGTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTA                  <  SRR4302540.3616803/94‑1 (MQ=60)
                                                                              GTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAA                 >  SRR4302540.84549/1‑94 (MQ=60)
                                                                              GTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAA                 >  SRR4302540.8671965/1‑94 (MQ=60)
                                                                              GTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAA                 >  SRR4302540.8873457/1‑94 (MQ=60)
                                                                              GTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAA                 >  SRR4302540.7561616/1‑94 (MQ=60)
                                                                              GTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAA                 <  SRR4302540.5053912/94‑1 (MQ=60)
                                                                              GTTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGGGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAA                 >  SRR4302540.6993969/1‑94 (MQ=60)
                                                                               TTTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAAT                <  SRR4302540.9066541/94‑1 (MQ=60)
                                                                                TTAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATC               <  SRR4302540.7738134/94‑1 (MQ=60)
                                                                                 TAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCA              <  SRR4302540.9747728/94‑1 (MQ=60)
                                                                                 TAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCA              <  SRR4302540.9193227/94‑1 (MQ=60)
                                                                                 TAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCA              <  SRR4302540.5381022/94‑1 (MQ=60)
                                                                                 TAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCA              <  SRR4302540.8662218/94‑1 (MQ=60)
                                                                                 TAAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCA              <  SRR4302540.2242478/94‑1 (MQ=60)
                                                                                  AAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAG             <  SRR4302540.5466936/94‑1 (MQ=60)
                                                                                  AAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAG             <  SRR4302540.2963927/94‑1 (MQ=60)
                                                                                  AAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAG             <  SRR4302540.3115868/94‑1 (MQ=60)
                                                                                  AAACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAG             <  SRR4302540.2987065/94‑1 (MQ=60)
                                                                                   ACCCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGG            <  SRR4302540.2196298/94‑1 (MQ=60)
                                                                                   AACCGCGGCG‑GCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGG            <  SRR4302540.10029014/94‑1 (MQ=60)
                                                                                   AACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGG            >  SRR4302540.2457275/1‑94 (MQ=60)
                                                                                    ACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGC           >  SRR4302540.7346049/1‑94 (MQ=60)
                                                                                    ACCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGC           <  SRR4302540.1044817/94‑1 (MQ=60)
                                                                                     CCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCT          <  SRR4302540.6781067/94‑1 (MQ=60)
                                                                                     CCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCT          <  SRR4302540.3515268/94‑1 (MQ=60)
                                                                                     CCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCT          <  SRR4302540.9170469/94‑1 (MQ=60)
                                                                                     CCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCT          <  SRR4302540.1118537/94‑1 (MQ=60)
                                                                                     CCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCT          <  SRR4302540.2185878/94‑1 (MQ=60)
                                                                                     CCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCT          >  SRR4302540.1273422/1‑94 (MQ=60)
                                                                                     CCGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCT          <  SRR4302540.1503626/94‑1 (MQ=60)
                                                                                      CGCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTG         <  SRR4302540.6458225/94‑1 (MQ=60)
                                                                                       GCGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGC        >  SRR4302540.2718727/1‑94 (MQ=60)
                                                                                        CGGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCC       <  SRR4302540.1922461/94‑1 (MQ=60)
                                                                                         GGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGGAGCTCTTTAATCAGGCTGCCG      <  SRR4302540.4932086/94‑1 (MQ=60)
                                                                                         GGCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCG      <  SRR4302540.9910248/94‑1 (MQ=60)
                                                                                          GCG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGC     >  SRR4302540.2035252/1‑94 (MQ=60)
                                                                                           CG‑CCCCCCGAGACGATCTCGGTGATTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCC    <  SRR4302540.1531887/94‑1 (MQ=60)
                                                                                           CG‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCC    <  SRR4302540.9408260/94‑1 (MQ=60)
                                                                                            G‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCA   <  SRR4302540.1473636/94‑1 (MQ=60)
                                                                                            G‑CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCA   >  SRR4302540.3345833/1‑94 (MQ=60)
                                                                                              CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCAT  >  SRR4302540.2135744/1‑94 (MQ=60)
                                                                                              CCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCAT  >  SRR4302540.5940231/1‑94 (MQ=60)
                                                                                              |                                                                                             
GAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCG‑GCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCGCCAT  >  NC_000913/3914950‑3915136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑