Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,915,661	T→C	Y78C (TAC→TGC)	atpG ←	membrane‑bound ATP synthase, F1 sector, gamma‑subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,915,661	0	T	C	100.0%	1428.5 / NA	445	Y78C (TAC→TGC)	atpG	membrane‑bound ATP synthase, F1 sector, gamma‑subunit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (236/209); total (236/209)

Only 100 of 455 total aligned reads displayed.

TCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATG  >  NC_000913/3915571‑3915750

 cGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGc                                                                                        <  1:5568630/93‑1 (MQ=255)

  ggTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGcc                                                                                       <  2:9842679/93‑1 (MQ=255)

   gTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGccc                                                                                      >  2:3525493/1‑93 (MQ=255)

   gTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGccc                                                                                      >  1:6500495/1‑93 (MQ=255)

       aGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCAcgc                                                                                  >  2:8317577/1‑93 (MQ=255)

       aGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCAcgc                                                                                  >  1:8073015/1‑93 (MQ=255)

        ggTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCAcgcg                                                                                 >  1:7243096/1‑93 (MQ=255)

         gTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGt                                                                                >  2:1436417/1‑93 (MQ=255)

         gTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGt                                                                                <  1:10014588/93‑1 (MQ=255)

          tCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGtt                                                                               >  2:6615383/1‑93 (MQ=255)

          tCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGtt                                                                               <  2:5985459/93‑1 (MQ=255)

          tCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGtt                                                                               <  1:2095828/93‑1 (MQ=255)

          tCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGtt                                                                               <  2:2409680/93‑1 (MQ=255)

            ttCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATTGTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTa                                                                             <  2:7503570/93‑1 (MQ=255)

            ttCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTa                                                                             >  1:7412684/1‑93 (MQ=255)

             tCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTaa                                                                            <  1:2499215/93‑1 (MQ=255)

             tCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTaa                                                                            <  2:3094817/93‑1 (MQ=255)

             tCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTaa                                                                            >  1:6191579/1‑93 (MQ=255)

              cATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAAc                                                                           <  2:1184842/93‑1 (MQ=255)

              cATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAAc                                                                           >  1:3213413/1‑93 (MQ=255)

              cATGTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAAc                                                                           <  1:2021003/93‑1 (MQ=255)

               aTTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACg                                                                          <  1:4495767/93‑1 (MQ=255)

                 ttCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTc                                                                        <  1:7046182/93‑1 (MQ=255)

                      ccAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCATGCAGCCCACGCGTTTTACGTCGCGGt                                                                   >  2:4514171/1‑93 (MQ=255)

                      ccAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGt                                                                   >  2:4769893/1‑93 (MQ=255)

                      ccAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGt                                                                   <  1:3358288/93‑1 (MQ=255)

                       cagcagTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTc                                                                  <  2:8734250/93‑1 (MQ=255)

                       cagcagTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTc                                                                  >  1:4940672/1‑93 (MQ=255)

                        agcagTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCt                                                                 >  1:3027831/1‑93 (MQ=255)

                        agcagTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCt                                                                 >  2:386469/1‑93 (MQ=255)

                          cagTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGCCTTc                                                               >  1:2284124/1‑93 (MQ=255)

                           agTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTcc                                                              >  1:2377461/1‑93 (MQ=255)

                            gTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCa                                                             >  1:922124/1‑93 (MQ=255)

                             ttttttGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAg                                                            >  1:1511444/1‑93 (MQ=255)

                             ttttttGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAg                                                            >  2:3301454/1‑93 (MQ=255)

                               ttttGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAgga                                                          >  2:2054653/1‑92 (MQ=255)

                               ttttGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGt                                                          <  1:1859480/93‑1 (MQ=255)

                                 ttGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTaa                                                        >  1:4727123/1‑93 (MQ=255)

                                    aaCAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAggg                                                     <  1:9732902/93‑1 (MQ=255)

                                     aCAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAgggg                                                    >  1:9492495/1‑92 (MQ=255)

                                     aCAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGt                                                    >  2:769092/1‑93 (MQ=255)

                                     aCAGGTTAAGGTTCAAACCACCGCACAAACCACGGGCGGCCGACACCACCAGGCAGCCCACGCGGTCAACGTCGCGGGCCCCCAGGAAAgggg                                                    >  1:7686378/1‑92 (MQ=255)

                                        ggTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCt                                                 <  2:6492155/93‑1 (MQ=255)

                                        ggTTAATGGTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTATCGTCGCGGTCTTCCATGTAAGGGTGCt                                                 <  2:7094487/93‑1 (MQ=255)

                                         gTTAATGTTCTAACCACCGCACAAACCACGGTCAGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCtt                                                >  2:5929513/1‑93 (MQ=255)

                                         gTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCtt                                                >  2:1725768/1‑93 (MQ=255)

                                         gTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCtt                                                >  1:3952686/1‑93 (MQ=255)

                                          ttAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTta                                               <  2:2767856/93‑1 (MQ=255)

                                           tAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTtat                                              >  2:1914272/1‑93 (MQ=255)

                                              tGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATAtt                                           <  2:4964915/93‑1 (MQ=255)

                                              tGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATAtt                                           <  1:9821933/93‑1 (MQ=255)

                                              tGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATAtt                                           >  1:6692779/1‑93 (MQ=255)

                                               gctCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTc                                          <  2:4752132/91‑1 (MQ=255)

                                               gTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGTGAAGGGTGCTTATATTc                                          >  1:8969027/1‑93 (MQ=255)

                                                ttCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTcc                                         >  2:8134650/1‑93 (MQ=255)

                                                 tCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCa                                        >  2:6147405/1‑93 (MQ=255)

                                                 tCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCa                                        <  2:2580905/93‑1 (MQ=255)

                                                  cAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAg                                       >  1:2756493/1‑93 (MQ=255)

                                                  cAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAg                                       >  2:4162552/1‑93 (MQ=255)

                                                  cAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAg                                       <  1:9889487/93‑1 (MQ=255)

                                                   aaaCCACCGCACAAACCACGGTCGGTCGACAGCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGa                                      >  2:3742991/1‑93 (MQ=255)

                                                    aaCCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGAt                                     <  2:6527738/93‑1 (MQ=255)

                                                    aaCCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGAt                                     >  1:35269/1‑93 (MQ=255)

                                                       caccGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCGGGTAAGGGTGCTTATATTACAGATTAc                                  >  2:950688/1‑93 (MQ=255)

                                                       caccGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTAc                                  >  2:5466134/1‑93 (MQ=255)

                                                        accGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTAcc                                 >  2:5791162/1‑93 (MQ=255)

                                                         ccGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCg                                >  1:6345333/1‑93 (MQ=255)

                                                            cacaAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCgtgt                             >  1:8516818/1‑93 (MQ=255)

                                                              caAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGc                           <  1:8429591/93‑1 (MQ=255)

                                                              caAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGc                           >  2:7463002/1‑93 (MQ=255)

                                                              caAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGc                           >  2:1864096/1‑93 (MQ=255)

                                                                aaCCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCaa                         >  2:9056435/1‑93 (MQ=255)

                                                                  ccACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAgg                       <  1:7805713/93‑1 (MQ=255)

                                                                  ccACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAgg                       <  1:5955326/93‑1 (MQ=255)

                                                                   cACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGt                      >  2:7860774/1‑93 (MQ=255)

                                                                    aCGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTg                     <  2:6889932/93‑1 (MQ=255)

                                                                    aCGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTg                     >  1:5780383/1‑93 (MQ=255)

                                                                       gtcggtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGAcc                  >  2:7811584/1‑93 (MQ=255)

                                                                       gtcggtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGAcc                  <  2:8480749/93‑1 (MQ=255)

                                                                       gtcggtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGAcc                  <  1:372712/93‑1 (MQ=255)

                                                                        tcggtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCa                 >  2:9756891/1‑93 (MQ=255)

                                                                          ggtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAAt               >  1:3077283/1‑93 (MQ=255)

                                                                           gtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATc              >  1:7521780/1‑93 (MQ=255)

                                                                           gtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATc              <  2:4384067/93‑1 (MQ=255)

                                                                           gtcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATc              >  1:9352105/1‑93 (MQ=255)

                                                                            tcgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCa             <  2:7201190/93‑1 (MQ=255)

                                                                             cgACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCAc            <  1:4215830/93‑1 (MQ=255)

                                                                              gACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACt           <  1:6598304/93‑1 (MQ=255)

                                                                              gACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGAGTGCAAGGTGACCCATCACt           >  2:5203586/1‑93 (MQ=255)

                                                                              gACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGGAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACt           >  2:8949379/1‑93 (MQ=255)

                                                                               acacCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACtt          >  1:5148318/1‑93 (MQ=255)

                                                                                caccacCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACttt         <  1:7871635/93‑1 (MQ=255)

                                                                                 accaccAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTg        >  1:1193228/1‑93 (MQ=255)

                                                                                 accaccAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTg        >  1:9646372/1‑93 (MQ=255)

                                                                                  ccaccaGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTgc       >  1:1436871/1‑93 (MQ=255)

                                                                                   caccaGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTgcg      >  2:2885481/1‑93 (MQ=255)

                                                                                      caGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCag   >  2:2299300/1‑92 (MQ=255)

                                                                                      caGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCAt   >  1:87218/1‑93 (MQ=255)

                                                                                      caGGCAGCCCACACGTTTAACGTCGCGGTGTACCAGATACGGGTGCTAATATTCCAGATTACCGTGTGCAAGGTGACCAATCCCTTTGCGCAt   <  2:1323100/93‑1 (MQ=255)

                                                                                       aGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATg  >  2:3549766/1‑93 (MQ=255)

TCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATG  >  NC_000913/3915571‑3915750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 238 total aligned reads displayed.

GTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTT  >  NC_000913/3915570‑3915754

GTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAG                                                                                             <  SRR4302540.4808188/94‑1 (MQ=60)

GTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAG                                                                                             <  SRR4302540.4808189/94‑1 (MQ=60)

  CGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGTTTAATGTTCAAACCACCGCACAAACCTCGGTCGGTCGACACCACCAGGCAGCC                                                                                           <  SRR4302540.633900/94‑1 (MQ=60)

  CGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCC                                                                                           <  SRR4302540.5629949/94‑1 (MQ=60)

   GGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCC                                                                                          <  SRR4302540.6405427/94‑1 (MQ=60)

   GGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCC                                                                                          >  SRR4302540.6572762/1‑94 (MQ=60)

   GGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCC                                                                                          >  SRR4302540.9020456/1‑94 (MQ=60)

   GGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCC                                                                                          <  SRR4302540.8592245/94‑1 (MQ=60)

    GTCCAGGTCTTCATTTCCGCTAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCA                                                                                         >  SRR4302540.9856686/1‑94 (MQ=60)

    GTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCA                                                                                         >  SRR4302540.9387919/1‑94 (MQ=60)

     TCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCAC                                                                                        <  SRR4302540.6724444/94‑1 (MQ=60)

      CCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACG                                                                                       >  SRR4302540.4979853/1‑94 (MQ=60)

       CAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGC                                                                                      >  SRR4302540.8166690/1‑94 (MQ=60)

        AGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCG                                                                                     >  SRR4302540.9461885/1‑94 (MQ=60)

        AGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCG                                                                                     >  SRR4302540.7323893/1‑94 (MQ=60)

        AGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCG                                                                                     >  SRR4302540.7323892/1‑94 (MQ=60)

         GGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGT                                                                                    >  SRR4302540.6652815/1‑94 (MQ=60)

          GTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTT                                                                                   <  SRR4302540.10131172/94‑1 (MQ=60)

          GTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTT                                                                                   <  SRR4302540.2011358/94‑1 (MQ=60)

          GTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTT                                                                                   >  SRR4302540.9942181/1‑94 (MQ=60)

           TCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTT                                                                                  <  SRR4302540.2118331/94‑1 (MQ=60)

           TCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTT                                                                                  <  SRR4302540.7437352/94‑1 (MQ=60)

            CTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTA                                                                                 >  SRR4302540.7495248/1‑94 (MQ=60)

            CTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTA                                                                                 >  SRR4302540.7957583/1‑94 (MQ=60)

            CTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTA                                                                                 >  SRR4302540.9746951/1‑94 (MQ=60)

            CTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTA                                                                                 <  SRR4302540.2252980/94‑1 (MQ=60)

             TTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAA                                                                                >  SRR4302540.6260513/1‑94 (MQ=60)

             TTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAA                                                                                <  SRR4302540.1117084/94‑1 (MQ=60)

             TTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAA                                                                                <  SRR4302540.9796649/94‑1 (MQ=60)

              TCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAAC                                                                               <  SRR4302540.1272365/94‑1 (MQ=60)

              TCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAAC                                                                               <  SRR4302540.9749310/94‑1 (MQ=60)

              TCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAAC                                                                               <  SRR4302540.5920193/94‑1 (MQ=60)

              TCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAAC                                                                               >  SRR4302540.3248299/1‑94 (MQ=60)

              TCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAAC                                                                               <  SRR4302540.2838301/94‑1 (MQ=60)

              TCACTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAAC                                                                               <  SRR4302540.2526172/94‑1 (MQ=60)

               CATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACG                                                                              >  SRR4302540.5341128/1‑94 (MQ=60)

               CATTTCCGCCAGCAGTTTTGTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACG                                                                              <  SRR4302540.6473758/94‑1 (MQ=60)

                ATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGT                                                                             <  SRR4302540.5692537/94‑1 (MQ=60)

                ATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGT                                                                             >  SRR4302540.8909695/1‑94 (MQ=60)

                ATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGT                                                                             >  SRR4302540.8840047/1‑94 (MQ=60)

                ATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGT                                                                             <  SRR4302540.4544510/94‑1 (MQ=60)

                 TTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAAagcg                                                                            >  SRR4302540.793759/1‑90 (MQ=60)

                 TTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTC                                                                            <  SRR4302540.9956355/94‑1 (MQ=60)

                 TTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTC                                                                            <  SRR4302540.2889778/94‑1 (MQ=60)

                 TTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTC                                                                            <  SRR4302540.2111758/94‑1 (MQ=60)

                  TTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCG                                                                           <  SRR4302540.7124536/94‑1 (MQ=60)

                    CCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCG                                                                         <  SRR4302540.3307679/94‑1 (MQ=60)

                    CCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCG                                                                         <  SRR4302540.7690032/94‑1 (MQ=60)

                      GCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGT                                                                       >  SRR4302540.1889904/1‑94 (MQ=60)

                       CCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTC                                                                      >  SRR4302540.4993991/1‑94 (MQ=60)

                       CCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTC                                                                      <  SRR4302540.7570513/94‑1 (MQ=60)

                        CAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCT                                                                     >  SRR4302540.8562519/1‑94 (MQ=60)

                        CAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCT                                                                     >  SRR4302540.3061088/1‑94 (MQ=60)

                        CAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCT                                                                     >  SRR4302540.387662/1‑94 (MQ=60)

                        CAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCT                                                                     >  SRR4302540.3504627/1‑94 (MQ=60)

                         AGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTT                                                                    >  SRR4302540.7193244/1‑94 (MQ=60)

                          GCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTC                                                                   >  SRR4302540.91231/1‑94 (MQ=60)

                          GCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGCCTTC                                                                   >  SRR4302540.2308674/1‑94 (MQ=60)

                           CAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCC                                                                  >  SRR4302540.2403081/1‑94 (MQ=60)

                            AGTTTTTTGAACAGGTTAATGTTCAAACCACCGTACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCA                                                                 >  SRR4302540.32467/1‑94 (MQ=60)

                            AGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCA                                                                 <  SRR4302540.9490520/94‑1 (MQ=60)

                            AGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCA                                                                 >  SRR4302540.931850/1‑94 (MQ=60)

                             GTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAG                                                                >  SRR4302540.1528143/1‑94 (MQ=60)

                             GTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAG                                                                >  SRR4302540.5152857/1‑94 (MQ=60)

                             GTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAG                                                                <  SRR4302540.9605647/94‑1 (MQ=60)

                             GTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAG                                                                <  SRR4302540.9473039/94‑1 (MQ=60)

                             GTTTTTTGAACAGGTTAATGTTCAAACCACCACACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAG                                                                <  SRR4302540.11616/94‑1 (MQ=60)

                              TTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGG                                                               <  SRR4302540.472848/94‑1 (MQ=60)

                               TTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGT                                                              <  SRR4302540.7818398/94‑1 (MQ=60)

                               TTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGT                                                              <  SRR4302540.5857102/94‑1 (MQ=60)

                                TTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTA                                                             <  SRR4302540.2750611/94‑1 (MQ=60)

                                TTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTA                                                             <  SRR4302540.1879874/94‑1 (MQ=60)

                                TTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTA                                                             <  SRR4302540.1879873/94‑1 (MQ=60)

                                TTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTA                                                             <  SRR4302540.2077920/94‑1 (MQ=60)

                                TTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTA                                                             >  SRR4302540.864825/1‑94 (MQ=60)

                                 TTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAA                                                            >  SRR4302540.4777611/1‑94 (MQ=60)

                                 TTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAA                                                            <  SRR4302540.2289173/94‑1 (MQ=60)

                                  TTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAG                                                           >  SRR4302540.9899008/1‑94 (MQ=60)

                                   TGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGG                                                          <  SRR4302540.7667402/94‑1 (MQ=60)

                                   TGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGG                                                          <  SRR4302540.2360560/94‑1 (MQ=60)

                                   TGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGG                                                          <  SRR4302540.2870177/94‑1 (MQ=60)

                                    GAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGG                                                         <  SRR4302540.9551801/94‑1 (MQ=60)

                                     AACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGT                                                        <  SRR4302540.9847189/94‑1 (MQ=60)

                                     AACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGT                                                        <  SRR4302540.499926/94‑1 (MQ=60)

                                     AACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGT                                                        <  SRR4302540.1635716/94‑1 (MQ=60)

                                     AACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGT                                                        <  SRR4302540.2053954/94‑1 (MQ=60)

                                     AACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGT                                                        <  SRR4302540.1469848/94‑1 (MQ=60)

                                     AACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGGAAGGGG                                                        >  SRR4302540.7773582/1‑94 (MQ=60)

                                     AACAGGTTAATGTTCAAACCAACGCACAAACCACCGTCGGTCGACACCACCAGGCAGACCCCGCGTTTAACGTCGCGGTCTTCCAGGTAcaggt                                                        >  SRR4302540.9553563/1‑89 (MQ=60)

                                     AACAGGTTAAGGTTCAAACCACCGCACAAACCACGGGCGGCCGACACCACCAGGCAGCCCACGCGGTCAACGTCGCGGgcccccaggaaagggg                                                        >  SRR4302540.7773583/1‑78 (MQ=60)

                                      ACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTG                                                       <  SRR4302540.2055967/94‑1 (MQ=60)

                                      ACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTG                                                       >  SRR4302540.2514870/1‑94 (MQ=60)

                                       CAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGC                                                      >  SRR4302540.3661121/1‑94 (MQ=60)

                                        AGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCT                                                     >  SRR4302540.7965409/1‑94 (MQ=60)

                                         GGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTT                                                    >  SRR4302540.892585/1‑94 (MQ=60)

                                         GGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTT                                                    >  SRR4302540.6255992/1‑94 (MQ=60)

                                         GGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTT                                                    >  SRR4302540.3995339/1‑94 (MQ=60)

                                         GGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTT                                                    >  SRR4302540.416484/1‑94 (MQ=60)

                                          GTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTA                                                   >  SRR4302540.6085022/1‑94 (MQ=60)

                                          GTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTA                                                   <  SRR4302540.8805179/94‑1 (MQ=60)

                                           TTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTAT                                                  <  SRR4302540.6474542/94‑1 (MQ=60)

                                           TTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTAT                                                  >  SRR4302540.646596/1‑94 (MQ=60)

                                           GTAATGTTCAAGCCCCCGCACAGACCACGGTCGGTCGACACCCCCAGGCAGCCCAGGGGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTAT                                                  <  SRR4302540.7590014/94‑1 (MQ=60)

                                             AATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATAT                                                <  SRR4302540.8399858/94‑1 (MQ=60)

                                             AATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATAT                                                >  SRR4302540.723278/1‑94 (MQ=60)

                                             AATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATAT                                                <  SRR4302540.8396374/94‑1 (MQ=60)

                                             AATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATAT                                                <  SRR4302540.9906059/94‑1 (MQ=60)

                                              ATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATT                                               <  SRR4302540.5822402/94‑1 (MQ=60)

                                              ATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATT                                               >  SRR4302540.6766670/1‑94 (MQ=60)

                                              ATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATT                                               >  SRR4302540.6766669/1‑94 (MQ=60)

                                               TGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGTGAAGGGTGCTTATATTC                                              >  SRR4302540.9075435/1‑94 (MQ=60)

                                               TGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTC                                              <  SRR4302540.9936845/94‑1 (MQ=60)

                                                GTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCC                                             <  SRR4302540.7381652/94‑1 (MQ=60)

                                                GTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCC                                             >  SRR4302540.3152808/1‑94 (MQ=60)

                                                GTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCC                                             >  SRR4302540.9118084/1‑94 (MQ=60)

                                                 TTCAAACCACCGCACAAGCCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCA                                            <  SRR4302540.1663958/94‑1 (MQ=60)

                                                 TTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCA                                            >  SRR4302540.3064708/1‑94 (MQ=60)

                                                  TCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAG                                           <  SRR4302540.2742282/94‑1 (MQ=60)

                                                  TCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAG                                           >  SRR4302540.2786280/1‑94 (MQ=60)

                                                   TAAACCACCGCTCAAACCACGGTCGTTCGACACCACCAGGCAGCCCACGCGTTTACCGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGA                                          <  SRR4302540.1257633/94‑1 (MQ=60)

                                                   CAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGA                                          <  SRR4302540.10004956/94‑1 (MQ=60)

                                                   CAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGA                                          <  SRR4302540.6812865/94‑1 (MQ=60)

                                                    AAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGAT                                         >  SRR4302540.4334590/1‑94 (MQ=60)

                                                    AAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGAT                                         >  SRR4302540.3789224/1‑94 (MQ=60)

                                                    AAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGAT                                         <  SRR4302540.1098351/94‑1 (MQ=60)

                                                    AAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGAT                                         >  SRR4302540.35637/1‑94 (MQ=60)

                                                      ACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTA                                       >  SRR4302540.7098648/1‑94 (MQ=60)

                                                      ACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTA                                       >  SRR4302540.7903818/1‑94 (MQ=60)

                                                      ACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTA                                       >  SRR4302540.7903816/1‑94 (MQ=60)

                                                      ACCACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTA                                       <  SRR4302540.5320357/94‑1 (MQ=60)

                                                        CACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACC                                     >  SRR4302540.2310099/1‑94 (MQ=60)

                                                        CACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACC                                     <  SRR4302540.8059586/94‑1 (MQ=60)

                                                        CACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGCCTTCCAGGTAAGGGCGCTTATATTCCAGATTACG                                     >  SRR4302540.2310103/1‑94 (MQ=60)

                                                         CCCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCG                                    <  SRR4302540.503765/94‑1 (MQ=60)

                                                         ACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCG                                    >  SRR4302540.6415989/1‑94 (MQ=60)

                                                         ACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCG                                    >  SRR4302540.797673/1‑94 (MQ=60)

                                                         ACCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCG                                    <  SRR4302540.4249066/94‑1 (MQ=60)

                                                          CCGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGT                                   <  SRR4302540.1451016/94‑1 (MQ=60)

                                                           CGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTG                                  >  SRR4302540.3557288/1‑94 (MQ=60)

                                                           CGCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTG                                  >  SRR4302540.9730906/1‑94 (MQ=60)

                                                            GCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGT                                 <  SRR4302540.3275046/94‑1 (MQ=60)

                                                            GCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGT                                 >  SRR4302540.8615794/1‑94 (MQ=60)

                                                            CCACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGT                                 <  SRR4302540.4567604/94‑1 (MQ=60)

                                                             CACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTG                                >  SRR4302540.9794105/1‑94 (MQ=60)

                                                              ACAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGA                               >  SRR4302540.4739290/1‑94 (MQ=60)

                                                               CAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCA                              <  SRR4302540.4418731/94‑1 (MQ=60)

                                                               CAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCA                              <  SRR4302540.8527453/94‑1 (MQ=60)

                                                               CAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCA                              <  SRR4302540.8527455/94‑1 (MQ=60)

                                                               CAAACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCA                              >  SRR4302540.2019140/1‑94 (MQ=60)

                                                                 cgCCACGGTCGGTCGACACCACCAGGCCACCCGCGCGTTTAACGTCACGATCTTCCAGGTAGGGGTACTTATCTTCCGGCTTCCCGTGTGCACG                            <  SRR4302540.7780021/92‑1 (MQ=16)

                                                                  ACCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGG                           <  SRR4302540.3150083/94‑1 (MQ=60)

                                                                  ACCACGGTCGGTCGACACCACCAAGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGG                           <  SRR4302540.6534289/94‑1 (MQ=60)

                                                                   CCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGT                          <  SRR4302540.4260204/94‑1 (MQ=60)

                                                                   CCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGT                          <  SRR4302540.7896931/94‑1 (MQ=60)

                                                                   CCACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGT                          <  SRR4302540.6021188/94‑1 (MQ=60)

                                                                    CACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTG                         >  SRR4302540.3746859/1‑94 (MQ=60)

                                                                    CACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTG                         >  SRR4302540.5844235/1‑94 (MQ=60)

                                                                    CACGGTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTG                         >  SRR4302540.5800197/1‑94 (MQ=60)

                                                                        GTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCA                     >  SRR4302540.1768752/1‑94 (MQ=60)

                                                                        GTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCA                     <  SRR4302540.376564/94‑1 (MQ=60)

                                                                        GTCGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCA                     <  SRR4302540.145992/94‑1 (MQ=60)

                                                                          CGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAAT                   >  SRR4302540.9402150/1‑94 (MQ=60)

                                                                          CGGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAAT                   >  SRR4302540.3111042/1‑94 (MQ=60)

                                                                           GGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATC                  >  SRR4302540.7605915/1‑94 (MQ=60)

                                                                           GGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATC                  >  SRR4302540.2493986/1‑94 (MQ=60)

                                                                           GGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATC                  >  SRR4302540.3927555/1‑94 (MQ=60)

                                                                           GGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATC                  >  SRR4302540.5921599/1‑94 (MQ=60)

                                                                           GGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATC                  <  SRR4302540.8309357/94‑1 (MQ=60)

                                                                           GGTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATC                  >  SRR4302540.9463488/1‑94 (MQ=60)

                                                                            GTCGACCCCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCA                 <  SRR4302540.6664350/94‑1 (MQ=60)

                                                                            GTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCA                 <  SRR4302540.6710625/94‑1 (MQ=60)

                                                                            GTCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCA                 <  SRR4302540.4955453/94‑1 (MQ=60)

                                                                             TCGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCAC                <  SRR4302540.6208738/94‑1 (MQ=60)

                                                                              CGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACT               >  SRR4302540.7500078/1‑94 (MQ=60)

                                                                              CGACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACT               <  SRR4302540.4261730/94‑1 (MQ=60)

                                                                               GACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTT              <  SRR4302540.6671371/94‑1 (MQ=60)

                                                                               GACACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTT              >  SRR4302540.5204116/1‑94 (MQ=60)

                                                                                 CACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTG            >  SRR4302540.3463965/1‑94 (MQ=60)

                                                                                 CACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTG            >  SRR4302540.1205525/1‑94 (MQ=60)

                                                                                 CACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTG            <  SRR4302540.2688214/94‑1 (MQ=60)

                                                                                 CACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTG            <  SRR4302540.4931050/94‑1 (MQ=60)

                                                                                  ACCACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGC           >  SRR4302540.1452456/1‑94 (MQ=60)

                                                                                    CACCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGC         >  SRR4302540.7000790/1‑94 (MQ=60)

                                                                                      CCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCAT       <  SRR4302540.3274936/94‑1 (MQ=60)

                                                                                      CCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCAT       >  SRR4302540.3500687/1‑94 (MQ=60)

                                                                                      CCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCAT       >  SRR4302540.8683403/1‑94 (MQ=60)

                                                                                      CCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCAT       >  SRR4302540.3091446/1‑94 (MQ=60)

                                                                                      CCAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCAT       <  SRR4302540.2459066/94‑1 (MQ=60)

                                                                                       CAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATG      >  SRR4302540.98231/1‑94 (MQ=60)

                                                                                       CAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATG      <  SRR4302540.6760181/94‑1 (MQ=60)

                                                                                       CAGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATG      <  SRR4302540.4456234/94‑1 (MQ=60)

                                                                                        AGGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGG     >  SRR4302540.508844/1‑94 (MQ=60)

                                                                                         GGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGT    >  SRR4302540.9684018/1‑94 (MQ=60)

                                                                                         GGCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGT    <  SRR4302540.3154800/94‑1 (MQ=60)

                                                                                          GCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTT   <  SRR4302540.8496689/94‑1 (MQ=60)

                                                                                          GCAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTT   <  SRR4302540.726242/94‑1 (MQ=60)

                                                                                           CAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTT  <  SRR4302540.7436431/94‑1 (MQ=60)

                                                                                           CAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTT  <  SRR4302540.5749903/94‑1 (MQ=60)

                                                                                           CAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTT  >  SRR4302540.2980188/1‑94 (MQ=60)

                                                                                           CAGCCCACGCGTTTAACGTCGCGGTCTGCCTGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTT  <  SRR4302540.1599528/94‑1 (MQ=60)

GTCGGTCCAGGTCTTCATTTCCGCCAGCAGTTTTTTGAACAGGTTAATGTTCAAACCACCGCACAAACCACGGTCGGTCGACACCACCAGGTAGCCCACGCGTTTAACGTCGCGGTCTTCCAGGTAAGGGTGCTTATATTCCAGATTACCGTGTGCAAGGTGACCAATCACTTTGCGCATGGTTT  >  NC_000913/3915570‑3915754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`