Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	1624	250.6	12620048	98.0%	12367647	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,913,076	(G)_6→7	intergenic (‑248/+105)	glmU ← / ← atpC	N‑acetyl glucosamine‑1‑phosphate uridyltransferase/membrane‑bound ATP synthase, F1 sector, epsilon‑subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,913,070	1	.	G	94.2%	844.4 / 42.2	275	intergenic (‑242/+111)	glmU/atpC	N‑acetyl glucosamine‑1‑phosphate uridyltransferase/membrane‑bound ATP synthase, F1 sector, epsilon‑subunit
Reads supporting (aligned to +/- strand): ref base . (11/5); new base G (135/124); total (146/129)
Fisher's exact test for biased strand distribution p-value = 3.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 309 total aligned reads displayed.

CTTTTGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑G‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGG  >  NC_000913/3912978‑3913157

cTTTTGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACa                                                                                           >  2:2817312/1‑93 (MQ=255)

 ttttGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑g                                                                                         >  1:5760796/1‑93 (MQ=255)

 ttttGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑g                                                                                         <  1:2518869/93‑1 (MQ=255)

 ttttGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑g                                                                                         <  1:4871894/93‑1 (MQ=255)

  tttGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑g‑g                                                                                       <  2:204910/93‑1 (MQ=255)

  tttGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑g‑g                                                                                       <  1:977271/93‑1 (MQ=255)

  tttGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑g‑g                                                                                       <  1:5325778/93‑1 (MQ=255)

        tGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑g‑ggggggt                                                                                 <  2:3207507/93‑3 (MQ=255)

        tGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑g‑ggggggt                                                                                 >  1:5530236/1‑91 (MQ=255)

           aGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑G‑GGGGGgtttt                                                                              >  1:3320823/1‑92 (MQ=255)

            gAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑G‑GGGGGgtttta                                                                             >  1:1107390/1‑91 (MQ=255)

            gAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑G‑GGGGGgtttta                                                                             >  2:10259/1‑91 (MQ=255)

              aaaTTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTtata                                                                            <  1:385981/93‑1 (MQ=255)

                aTTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATc                                                                          <  2:5136525/93‑1 (MQ=255)

                 ttAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATca                                                                         >  2:3971913/1‑93 (MQ=255)

                   aaGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATcagc                                                                       >  2:3525428/1‑93 (MQ=255)

                     ggCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATcagcag                                                                     <  2:443601/93‑1 (MQ=255)

                      gCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAgg                                                                    <  1:2195426/93‑1 (MQ=255)

                       caatACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑GCGGGGGTTTTATATCAGCAGGa                                                                   <  2:4370284/90‑1 (MQ=255)

                       cAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGa                                                                   >  1:3524759/1‑93 (MQ=255)

                       cAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGa                                                                   <  1:4228421/93‑1 (MQ=255)

                       cAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGa                                                                   >  1:3358975/1‑93 (MQ=255)

                        aGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGAt                                                                  >  1:6145816/1‑93 (MQ=255)

                        aGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGAt                                                                  >  1:794334/1‑93 (MQ=255)

                         gTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATc                                                                 >  2:6178969/1‑93 (MQ=255)

                           aCCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTa                                                               >  1:2389082/1‑93 (MQ=255)

                           aCCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTa                                                               >  1:755821/1‑93 (MQ=255)

                            ccTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTAt                                                              <  1:3281707/93‑1 (MQ=255)

                            ccTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTAt                                                              >  1:4334273/1‑93 (MQ=255)

                             cTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATAAATAAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTAtg                                                             <  2:1163025/93‑1 (MQ=255)

                              ttAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTAtgt                                                            >  2:3450813/1‑93 (MQ=255)

                              ttAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTAtgt                                                            >  2:754319/1‑93 (MQ=255)

                              ttAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTAtgt                                                            >  1:6060727/1‑93 (MQ=255)

                                aaTTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGa                                                          <  2:4749718/93‑1 (MQ=255)

                                aaTTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGa                                                          <  2:4550046/93‑1 (MQ=255)

                                aaTTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGa                                                          <  2:2675328/93‑1 (MQ=255)

                                aaTTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGa                                                          >  2:2853817/1‑93 (MQ=255)

                                 aTTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGaa                                                         <  2:1639060/93‑1 (MQ=255)

                                 aTTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGaa                                                         <  1:5105563/93‑1 (MQ=255)

                                   ttAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACg                                                       <  1:4092755/93‑1 (MQ=255)

                                   ttAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACg                                                       <  1:4623761/93‑1 (MQ=255)

                                    tAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGc                                                      <  1:2330134/93‑1 (MQ=255)

                                    tAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGc                                                      <  2:6090718/93‑1 (MQ=255)

                                      aGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTa                                                    <  1:5381403/93‑1 (MQ=255)

                                          tCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCa                                                <  2:3651632/93‑1 (MQ=255)

                                          tCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCa                                                <  1:4715415/93‑1 (MQ=255)

                                            aGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAgg                                              >  1:1450740/1‑93 (MQ=255)

                                             ggTGGATGTTTTTGCTCTTAGTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGa                                             <  2:2915298/93‑1 (MQ=255)

                                              gTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAc                                            <  2:3936103/93‑1 (MQ=255)

                                              gTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAc                                            >  1:3636152/1‑93 (MQ=255)

                                              gTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAc                                            >  1:5230145/1‑93 (MQ=255)

                                               tGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACg                                           >  2:327607/1‑93 (MQ=255)

                                                ggATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACgg                                          >  2:5506110/1‑93 (MQ=255)

                                                     tttttGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTcac                                     >  1:681460/1‑93 (MQ=255)

                                                      ttttGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTcaca                                    <  1:5688856/93‑1 (MQ=255)

                                                       tttGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCacac                                   >  1:5593825/1‑93 (MQ=255)

                                                       tttGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCacac                                   <  2:2159059/93‑1 (MQ=255)

                                                         tGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAcgc                                 >  2:375828/1‑93 (MQ=255)

                                                          gCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAcgcg                                >  1:6206726/1‑93 (MQ=255)

                                                          gCTCTTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAcgcg                                >  1:2628818/1‑93 (MQ=255)

                                                           ctctTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACgcgc                               >  1:1776898/1‑93 (MQ=255)

                                                            tctTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCa                              >  1:6091028/1‑93 (MQ=255)

                                                            tctTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCa                              >  1:4955462/1‑93 (MQ=255)

                                                             ctTATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCaa                             <  2:4832693/93‑1 (MQ=255)

                                                              ttATTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCaaa                            >  2:5311122/1‑93 (MQ=255)

                                                                aTTTCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCaaaaa                          <  2:1329045/93‑1 (MQ=255)

                                                                 tttCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCaaaaaa                         <  1:4008790/93‑1 (MQ=255)

                                                                  ttCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCaaaaaaa                        <  1:1065849/93‑1 (MQ=255)

                                                                   tCGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCaaaaaaaa                       >  1:4746765/1‑93 (MQ=255)

                                                                   tCGATCAATGAATAAACAGGAAAACAGG‑GGGGGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCaagaaaaa                       >  1:1275073/1‑93 (MQ=255)

                                                                    cGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAag                      >  2:5420862/1‑93 (MQ=255)

                                                                    cGATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAag                      >  1:3592696/1‑93 (MQ=255)

                                                                     gATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagc                     >  1:2829085/1‑93 (MQ=255)

                                                                     gATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagc                     <  1:3109465/93‑1 (MQ=255)

                                                                     gATCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagc                     <  2:1479541/93‑1 (MQ=255)

                                                                      aTCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagcc                    >  1:2106557/1‑93 (MQ=255)

                                                                      aTCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagcc                    <  1:400083/93‑1 (MQ=255)

                                                                       tCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagcca                   <  1:594768/93‑1 (MQ=255)

                                                                       tCAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagcca                   <  1:1352303/93‑1 (MQ=255)

                                                                       tCAATGAATAAACAGGAAAACAGG‑GGGGGCTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagcca                   >  1:200919/1‑93 (MQ=255)

                                                                       tCAATGAATAAACAGAAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagcca                   <  2:43280/93‑1 (MQ=255)

                                                                        cAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagccag                  >  2:5969276/1‑93 (MQ=255)

                                                                        cAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagccag                  >  2:2497326/1‑93 (MQ=255)

                                                                        cAATGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTCAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagccag                  >  2:911287/1‑93 (MQ=255)

                                                                         aaTGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagccagc                 >  2:1785369/1‑93 (MQ=255)

                                                                         aaTGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagccagc                 >  1:2290229/1‑93 (MQ=255)

                                                                          aTGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagccagcc                <  1:4458306/93‑1 (MQ=255)

                                                                          aTGAATAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagccagcc                <  1:319511/93‑1 (MQ=255)

                                                                             aaTAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGt             >  2:5013156/1‑93 (MQ=255)

                                                                             aaTAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGt             >  2:5726108/1‑93 (MQ=255)

                                                                               tAAACAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGttt           <  2:4092724/93‑1 (MQ=255)

                                                                                aaaCAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTc          <  1:5831728/93‑1 (MQ=255)

                                                                                aaaCAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTc          >  1:370475/1‑93 (MQ=255)

                                                                                  aCAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCa        >  2:4883106/1‑93 (MQ=255)

                                                                                   cAGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAg       <  2:1090056/93‑1 (MQ=255)

                                                                                    aGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGa      >  2:5873519/1‑93 (MQ=255)

                                                                                    aGGAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGa      >  2:1209657/1‑93 (MQ=255)

                                                                                      gAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACt    >  1:3930083/1‑93 (MQ=255)

                                                                                      gAAAACAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACt    <  1:3429692/93‑1 (MQ=255)

                                                                                       aaaaCAGG‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAACCAGCCTGTTTTCAGACTg   >  1:2721812/1‑93 (MQ=255)

CTTTTGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑G‑GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGG  >  NC_000913/3912978‑3913157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTT  >  NC_000913/3912983‑3913169

GTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑GGGGGG                                                                                               >  SRR4302533.3279829/1‑94 (MQ=60)

GTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑GGGGGG                                                                                               <  SRR4302533.5434752/94‑1 (MQ=60)

  CTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑GGGGGGGT                                                                                             >  SRR4302533.2172352/1‑94 (MQ=60)

  CTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑GGGGGGGT                                                                                             >  SRR4302533.5563620/1‑94 (MQ=60)

   TGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑GGGGGGGTT                                                                                            >  SRR4302533.5730113/1‑94 (MQ=60)

   TGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑GGGGGGGTT                                                                                            >  SRR4302533.2911641/1‑94 (MQ=60)

    GCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑GGGGGGGTTT                                                                                           >  SRR4302533.2633701/1‑94 (MQ=60)

     CAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTT                                                                                           >  SRR4302533.4643264/1‑94 (MQ=60)

     CAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTT                                                                                           >  SRR4302533.3341334/1‑94 (MQ=60)

      AGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTA                                                                                          >  SRR4302533.780370/1‑94 (MQ=60)

      AGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTA                                                                                          >  SRR4302533.6220780/1‑94 (MQ=60)

      AGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTA                                                                                          >  SRR4302533.1113954/1‑94 (MQ=60)

       GAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTAT                                                                                         <  SRR4302533.3428106/94‑1 (MQ=60)

         AAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATAT                                                                                       >  SRR4302533.5708367/1‑94 (MQ=60)

         AAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATAT                                                                                       <  SRR4302533.388311/94‑1 (MQ=60)

          AATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATC                                                                                      <  SRR4302533.682115/94‑1 (MQ=60)

           ATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCA                                                                                     <  SRR4302533.977121/94‑1 (MQ=60)

           ATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCA                                                                                     <  SRR4302533.2507128/94‑1 (MQ=60)

            TTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAG                                                                                    <  SRR4302533.5952001/94‑1 (MQ=60)

             TAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGC                                                                                   >  SRR4302533.5034360/1‑94 (MQ=60)

              AAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCA                                                                                  <  SRR4302533.4738885/94‑1 (MQ=60)

               AGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAG                                                                                 <  SRR4302533.4027758/94‑1 (MQ=60)

               AGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAG                                                                                 >  SRR4302533.4280808/1‑94 (MQ=60)

               AGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAG                                                                                 <  SRR4302533.3591749/94‑1 (MQ=60)

               AGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAG                                                                                 <  SRR4302533.6016932/94‑1 (MQ=60)

               AGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAG                                                                                 <  SRR4302533.2817553/94‑1 (MQ=60)

                 GCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGA                                                                               <  SRR4302533.1537466/94‑1 (MQ=60)

                 GCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGA                                                                               >  SRR4302533.3546482/1‑94 (MQ=60)

                 GCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGA                                                                               <  SRR4302533.2208953/94‑1 (MQ=60)

                 GCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGA                                                                               >  SRR4302533.3379729/1‑94 (MQ=60)

                  CAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGAT                                                                              <  SRR4302533.3185450/94‑1 (MQ=60)

                  CAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGAT                                                                              <  SRR4302533.4253986/94‑1 (MQ=60)

                  CAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGAT                                                                              <  SRR4302533.3737899/94‑1 (MQ=60)

                  CAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGAT                                                                              >  SRR4302533.799007/1‑94 (MQ=60)

                  CAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGAT                                                                              >  SRR4302533.6182817/1‑94 (MQ=60)

                   AGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATC                                                                             >  SRR4302533.6198909/1‑94 (MQ=60)

                     TACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTA                                                                           >  SRR4302533.2403838/1‑94 (MQ=60)

                     TACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTA                                                                           >  SRR4302533.3424064/1‑94 (MQ=60)

                     TACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTA                                                                           <  SRR4302533.5564690/94‑1 (MQ=60)

                     TACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTA                                                                           >  SRR4302533.760268/1‑94 (MQ=60)

                      ACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTAT                                                                          <  SRR4302533.772150/94‑1 (MQ=60)

                      ACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTAT                                                                          >  SRR4302533.4360387/1‑94 (MQ=60)

                      ACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTAT                                                                          <  SRR4302533.4191114/94‑1 (MQ=60)

                       CCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATG                                                                         >  SRR4302533.4384006/1‑94 (MQ=60)

                       CCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATG                                                                         >  SRR4302533.3514438/1‑94 (MQ=60)

                       CCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATG                                                                         <  SRR4302533.1090214/94‑1 (MQ=60)

                       CCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATG                                                                         <  SRR4302533.3301968/94‑1 (MQ=60)

                        CTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGT                                                                        <  SRR4302533.4436904/94‑1 (MQ=60)

                        CTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGT                                                                        >  SRR4302533.1279137/1‑94 (MQ=60)

                        CTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGT                                                                        <  SRR4302533.4564521/94‑1 (MQ=60)

                        CTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGT                                                                        >  SRR4302533.6097417/1‑94 (MQ=60)

                        CTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGT                                                                        <  SRR4302533.4804272/94‑1 (MQ=60)

                        CTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGT                                                                        >  SRR4302533.5394916/1‑94 (MQ=60)

                        CTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGT                                                                        <  SRR4302533.5688162/94‑1 (MQ=60)

                         TTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTG                                                                       <  SRR4302533.5265336/94‑1 (MQ=60)

                          TAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGA                                                                      <  SRR4302533.362842/94‑1 (MQ=60)

                          TAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGA                                                                      >  SRR4302533.1305217/1‑94 (MQ=60)

                          TAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGA                                                                      >  SRR4302533.6133870/1‑94 (MQ=60)

                           AATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAA                                                                     >  SRR4302533.1804867/1‑94 (MQ=60)

                            ATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAAC                                                                    <  SRR4302533.2048553/94‑1 (MQ=60)

                            ATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAAC                                                                    <  SRR4302533.5136404/94‑1 (MQ=60)

                            ATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAAC                                                                    <  SRR4302533.874173/94‑1 (MQ=60)

                              TTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGC                                                                  <  SRR4302533.4117668/94‑1 (MQ=60)

                              TTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGC                                                                  <  SRR4302533.4651787/94‑1 (MQ=60)

                               TAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCT                                                                 <  SRR4302533.2344560/94‑1 (MQ=60)

                                AAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTA                                                                <  SRR4302533.2397525/94‑1 (MQ=60)

                                 AGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTAT                                                               <  SRR4302533.2326207/94‑1 (MQ=60)

                                 AGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTAT                                                               <  SRR4302533.5413734/94‑1 (MQ=60)

                                 AGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTAT                                                               <  SRR4302533.1843688/94‑1 (MQ=60)

                                   CGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTC                                                             >  SRR4302533.749712/1‑94 (MQ=60)

                                   CGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTC                                                             <  SRR4302533.5170580/94‑1 (MQ=60)

                                    GTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCA                                                            >  SRR4302533.3919124/1‑94 (MQ=60)

                                    GTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCA                                                            >  SRR4302533.5648532/1‑94 (MQ=60)

                                    GTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCA                                                            >  SRR4302533.5251281/1‑94 (MQ=60)

                                    GTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCA                                                            >  SRR4302533.1301898/1‑94 (MQ=60)

                                     TCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAG                                                           <  SRR4302533.4743997/94‑1 (MQ=60)

                                      CAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGG                                                          >  SRR4302533.4966808/1‑94 (MQ=60)

                                      CAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGG                                                          >  SRR4302533.3933177/1‑94 (MQ=60)

                                      CAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGG                                                          >  SRR4302533.1459493/1‑94 (MQ=60)

                                      CAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGG                                                          <  SRR4302533.4294395/94‑1 (MQ=60)

                                        GGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAGCAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAC                                                        <  SRR4302533.3602786/94‑1 (MQ=60)

                                        GGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAC                                                        >  SRR4302533.5261606/1‑94 (MQ=60)

                                        GGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAC                                                        >  SRR4302533.3658510/1‑94 (MQ=60)

                                        GGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGAC                                                        <  SRR4302533.2716357/94‑1 (MQ=60)

                                          TGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGG                                                      >  SRR4302533.220621/1‑94 (MQ=60)

                                          TGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGG                                                      <  SRR4302533.5565459/94‑1 (MQ=60)

                                           GGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGG                                                     <  SRR4302533.3629872/94‑1 (MQ=60)

                                            GATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGT                                                    <  SRR4302533.5366983/94‑1 (MQ=60)

                                            GATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGT                                                    >  SRR4302533.6328849/1‑94 (MQ=60)

                                             ATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTC                                                   >  SRR4302533.1452683/1‑94 (MQ=60)

                                              TGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCA                                                  >  SRR4302533.994014/1‑94 (MQ=60)

                                               GTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCAC                                                 >  SRR4302533.685490/1‑94 (MQ=60)

                                                TTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACA                                                >  SRR4302533.3377057/1‑94 (MQ=60)

                                                TTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACA                                                >  SRR4302533.2551766/1‑94 (MQ=60)

                                                 TTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC                                               >  SRR4302533.2646182/1‑94 (MQ=60)

                                                 TTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC                                               <  SRR4302533.4034355/94‑1 (MQ=60)

                                                 TTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC                                               <  SRR4302533.5723217/94‑1 (MQ=60)

                                                 TTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC                                               >  SRR4302533.5627619/1‑94 (MQ=60)

                                                 TTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC                                               >  SRR4302533.610201/1‑94 (MQ=60)

                                                   TTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGC                                             >  SRR4302533.5436990/1‑94 (MQ=60)

                                                   TTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGC                                             >  SRR4302533.4116358/1‑94 (MQ=60)

                                                    TGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCG                                            <  SRR4302533.3599925/94‑1 (MQ=60)

                                                    TGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCG                                            >  SRR4302533.2492217/1‑94 (MQ=60)

                                                    TGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCG                                            >  SRR4302533.6243946/1‑94 (MQ=60)

                                                    TGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCG                                            >  SRR4302533.2644972/1‑94 (MQ=60)

                                                     GCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGC                                           >  SRR4302533.1787715/1‑94 (MQ=60)

                                                      CTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCA                                          >  SRR4302533.4635767/1‑94 (MQ=60)

                                                      CTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCA                                          >  SRR4302533.4985478/1‑94 (MQ=60)

                                                      CTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCA                                          >  SRR4302533.6127842/1‑94 (MQ=60)

                                                          TATTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAA                                      <  SRR4302533.2743460/94‑1 (MQ=60)

                                                            TTTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAA                                    <  SRR4302533.4033198/94‑1 (MQ=60)

                                                             TTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAA                                   >  SRR4302533.4775543/1‑94 (MQ=60)

                                                             TTCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAA                                   <  SRR4302533.1072110/94‑1 (MQ=60)

                                                             TTCGATCAATGAATAAACAGGAAAACAGGGGGGGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAGAAAAA                                   >  SRR4302533.1282740/1‑94 (MQ=60)

                                                              TCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAG                                  >  SRR4302533.3614808/1‑94 (MQ=60)

                                                              TCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAG                                  >  SRR4302533.2463299/1‑94 (MQ=60)

                                                              TCGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAG                                  >  SRR4302533.231747/1‑94 (MQ=60)

                                                               CGATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGC                                 >  SRR4302533.2846491/1‑94 (MQ=60)

                                                                GATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCC                                >  SRR4302533.2119547/1‑94 (MQ=60)

                                                                GATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCC                                <  SRR4302533.3128578/94‑1 (MQ=60)

                                                                 ATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCA                               <  SRR4302533.2401580/94‑1 (MQ=60)

                                                                 ATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCA                               <  SRR4302533.5756019/94‑1 (MQ=60)

                                                                 ATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCA                               <  SRR4302533.402497/94‑1 (MQ=60)

                                                                 ATCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCA                               >  SRR4302533.3357256/1‑94 (MQ=60)

                                                                 ATCAATGAATAAACAGGAAAACAGGGGGGGCTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCA                               >  SRR4302533.202193/1‑94 (MQ=60)

                                                                  TCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAG                              <  SRR4302533.1360436/94‑1 (MQ=60)

                                                                  TCAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAG                              <  SRR4302533.598274/94‑1 (MQ=60)

                                                                   CAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGC                             <  SRR4302533.3218919/94‑1 (MQ=60)

                                                                   CAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGC                             <  SRR4302533.318793/94‑1 (MQ=60)

                                                                   CAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGC                             >  SRR4302533.2304411/1‑94 (MQ=60)

                                                                   CAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGC                             >  SRR4302533.370454/1‑94 (MQ=60)

                                                                   CAATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGC                             >  SRR4302533.4696312/1‑94 (MQ=60)

                                                                    AATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCC                            >  SRR4302533.1420638/1‑94 (MQ=60)

                                                                     ATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCT                           >  SRR4302533.1005166/1‑94 (MQ=60)

                                                                     ATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCT                           >  SRR4302533.3993038/1‑94 (MQ=60)

                                                                     ATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCT                           <  SRR4302533.6168589/94‑1 (MQ=60)

                                                                     ATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCT                           >  SRR4302533.5814664/1‑94 (MQ=60)

                                                                     ATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCT                           <  SRR4302533.4485270/94‑1 (MQ=60)

                                                                     ATGAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCT                           <  SRR4302533.321468/94‑1 (MQ=60)

                                                                       GAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGT                         >  SRR4302533.1587297/1‑94 (MQ=60)

                                                                       GAATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGT                         <  SRR4302533.3327160/94‑1 (MQ=60)

                                                                        AATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTT                        <  SRR4302533.4021379/94‑1 (MQ=60)

                                                                        AATAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTT                        <  SRR4302533.3336122/94‑1 (MQ=60)

                                                                        AATAAACAGGAAAACAGGGGGGGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTT                        >  SRR4302533.4912603/1‑94 (MQ=60)

                                                                          TAAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTC                      >  SRR4302533.372712/1‑94 (MQ=60)

                                                                           AAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCC                     <  SRR4302533.5866973/94‑1 (MQ=60)

                                                                           AAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCC                     <  SRR4302533.6079313/94‑1 (MQ=60)

                                                                           AAACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCC                     <  SRR4302533.302805/94‑1 (MQ=60)

                                                                            AACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAACAAAAAGCCAGCCTGTTTCCA                    >  SRR4302533.4231880/1‑94 (MQ=60)

                                                                            AACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCA                    >  SRR4302533.1226637/1‑94 (MQ=60)

                                                                             ACAGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAG                   <  SRR4302533.3774912/94‑1 (MQ=60)

                                                                               AGGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGAC                 >  SRR4302533.2289679/1‑94 (MQ=60)

                                                                                GGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACT                >  SRR4302533.3954076/1‑94 (MQ=60)

                                                                                GGAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACT                <  SRR4302533.3708594/94‑1 (MQ=60)

                                                                                 GAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTG               <  SRR4302533.4748550/94‑1 (MQ=60)

                                                                                 GAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTG               <  SRR4302533.3450880/94‑1 (MQ=60)

                                                                                 GAAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAACCAGCCTGTTTTCAGACTG               >  SRR4302533.2738516/1‑94 (MQ=60)

                                                                                  AAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGG              <  SRR4302533.745375/94‑1 (MQ=60)

                                                                                  AAAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGG              <  SRR4302533.4025344/94‑1 (MQ=60)

                                                                                   AAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGC             <  SRR4302533.4961120/94‑1 (MQ=60)

                                                                                   AAACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGC             >  SRR4302533.294247/1‑94 (MQ=60)

                                                                                    AACAGGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCT            <  SRR4302533.1312684/94‑1 (MQ=60)

                                                                                       agGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTT         <  SRR4302533.1410671/92‑1 (MQ=60)

                                                                                       agGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTT         <  SRR4302533.2513082/92‑1 (MQ=60)

                                                                                       G‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTG        >  SRR4302533.2850142/1‑94 (MQ=60)

                                                                                       G‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTG        <  SRR4302533.4106224/94‑1 (MQ=60)

                                                                                       G‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTG        >  SRR4302533.4841495/1‑94 (MQ=60)

                                                                                         GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGT       <  SRR4302533.2336322/94‑1 (MQ=60)

                                                                                         GGGGGGTTTTATATCAGCAGCATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGT       <  SRR4302533.2151810/94‑1 (MQ=60)

                                                                                          GGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTG      >  SRR4302533.340134/1‑94 (MQ=60)

                                                                                            GGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCT    >  SRR4302533.6207211/1‑94 (MQ=60)

                                                                                             GGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTT   <  SRR4302533.5346486/94‑1 (MQ=60)

                                                                                              GTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTT  <  SRR4302533.4781765/94‑1 (MQ=60)

GTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACA‑GGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTT  >  NC_000913/3912983‑3913169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`