Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,923,857 T→C Q76R (CAG→CGG)  mioC ← MioC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,923,8570TC99.8% 1703.2 / ‑5.3 522Q76R (CAG→CGG) mioCMioC
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (219/302);  total (220/302)
Fisher's exact test for biased strand distribution p-value = 4.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01

Only 100 of 532 total aligned reads displayed.

TCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAG  >  NC_000913/3923767‑3923946
                                                                                          |                                                                                         
tCGAGTTTATCGATAGCCCCACACAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGt                                                                                         <  2:5494718/93‑1 (MQ=255)
tCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGt                                                                                         >  2:8716109/1‑93 (MQ=255)
tCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGt                                                                                         <  1:2470385/93‑1 (MQ=255)
   aGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTcc                                                                                      <  2:5910723/93‑1 (MQ=255)
   aGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTcc                                                                                      >  1:9029632/1‑93 (MQ=255)
     tttATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTg                                                                                    >  2:2777689/1‑93 (MQ=255)
       tATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCa                                                                                  >  2:1268765/1‑93 (MQ=255)
       tATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCa                                                                                  <  1:8304604/93‑1 (MQ=255)
       tATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCa                                                                                  >  2:2490848/1‑93 (MQ=255)
        agcGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCaa                                                                                 <  1:8496083/91‑1 (MQ=255)
        aTCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCaa                                                                                 >  1:4207403/1‑93 (MQ=255)
           gATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGc                                                                              <  1:9247793/93‑1 (MQ=255)
            aTAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCt                                                                             <  1:7386544/93‑1 (MQ=255)
            aTAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCt                                                                             >  2:8491904/1‑93 (MQ=255)
            aTAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCt                                                                             <  2:1105395/93‑1 (MQ=255)
             tAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCtt                                                                            >  1:4905346/1‑93 (MQ=255)
             tAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCtt                                                                            <  2:7496904/93‑1 (MQ=255)
             tAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCtt                                                                            >  1:1248324/1‑93 (MQ=255)
             catccccACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCtt                                                                            >  1:6123781/4‑93 (MQ=255)
              aGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTc                                                                           <  2:3617606/93‑1 (MQ=255)
               gCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCa                                                                          <  2:7754785/93‑1 (MQ=255)
               gCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCa                                                                          <  2:5076267/93‑1 (MQ=255)
               gCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCa                                                                          >  2:6439453/1‑93 (MQ=255)
                ccccACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCAt                                                                         >  2:6674106/1‑93 (MQ=255)
                 cccACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATa                                                                        <  1:3023174/93‑1 (MQ=255)
                  ccACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATag                                                                       >  2:4169193/1‑93 (MQ=255)
                  ccACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATag                                                                       >  2:7999099/1‑93 (MQ=255)
                   cacaAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATaga                                                                      >  1:5767491/1‑93 (MQ=255)
                   cacaAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATaga                                                                      <  1:8675177/93‑1 (MQ=255)
                   cacaAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATaga                                                                      >  2:4891335/1‑93 (MQ=255)
                    acaAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGATAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaa                                                                     >  1:3478558/1‑93 (MQ=255)
                    acaAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaa                                                                     <  1:5197459/93‑1 (MQ=255)
                       aaaGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATcgaaaga                                                                  >  1:2269968/1‑92 (MQ=255)
                       aaaGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaagg                                                                  >  2:6753631/1‑93 (MQ=255)
                         aGGTTTCATATTCACGACTGCTAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggag                                                                <  1:10014048/93‑1 (MQ=255)
                          ggTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggaga                                                               <  1:6708325/93‑1 (MQ=255)
                          ggTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggaga                                                               <  1:7908651/93‑1 (MQ=255)
                          ggTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggaga                                                               <  1:6288080/93‑1 (MQ=255)
                          ggTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggaga                                                               >  1:2746757/1‑93 (MQ=255)
                           gtgtCATATTCACGACTGCCAATACCGATTGGGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaa                                                              <  1:3333067/93‑1 (MQ=255)
                            ggtCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaaa                                                             <  1:7987745/92‑1 (MQ=255)
                             gtCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATagaaaggagaaag                                                            >  2:1513271/1‑93 (MQ=255)
                               cATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGt                                                          <  1:7170479/93‑1 (MQ=255)
                               cATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGt                                                          <  1:5520787/93‑1 (MQ=255)
                               cATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGt                                                          <  1:204637/93‑1 (MQ=255)
                                atatTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGtt                                                         <  1:6579444/93‑1 (MQ=255)
                                 tatTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTg                                                        >  2:697932/1‑93 (MQ=255)
                                 tatTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTg                                                        >  2:8522992/1‑93 (MQ=255)
                                   ttCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTc                                                      >  2:7120060/1‑93 (MQ=255)
                                    tCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTcc                                                     <  2:985402/93‑1 (MQ=255)
                                    tCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTcc                                                     >  1:3888108/1‑93 (MQ=255)
                                       cGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGa                                                  <  1:5326465/93‑1 (MQ=255)
                                        gACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGaa                                                 <  1:3116300/93‑1 (MQ=255)
                                          cTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAata                                               <  2:8910672/93‑1 (MQ=255)
                                           tGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAatat                                              >  1:6016679/1‑93 (MQ=255)
                                            gCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtc                                             <  1:471173/93‑1 (MQ=255)
                                             ccAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtct                                            <  1:9483852/93‑1 (MQ=255)
                                              cAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtctc                                           <  2:1316457/93‑1 (MQ=255)
                                              cAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAtctc                                           >  1:1174044/1‑93 (MQ=255)
                                               aaTACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTcc                                          <  2:9720166/93‑1 (MQ=255)
                                                aTACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCg                                         >  2:2720851/1‑93 (MQ=255)
                                                aTACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCg                                         <  2:2989036/93‑1 (MQ=255)
                                                aTACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCg                                         <  2:3109795/93‑1 (MQ=255)
                                                 tACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCgg                                        <  2:9009692/93‑1 (MQ=255)
                                                   ccGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGcc                                      >  2:4263655/1‑92 (MQ=255)
                                                   ccGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCa                                      <  1:375654/93‑1 (MQ=255)
                                                    cGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCAc                                     <  2:9557378/93‑1 (MQ=255)
                                                     gATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCAcc                                    <  1:4612581/93‑1 (MQ=255)
                                                        tGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtg                                 <  2:3961228/93‑1 (MQ=255)
                                                         gcgcCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtgg                                <  2:3287128/93‑1 (MQ=255)
                                                         gcgcCAAAGCGGACGGCAGAAAGATCCGGCTTCCGTTCCTGCCATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtgg                                <  1:1625336/93‑1 (MQ=255)
                                                          cgcCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtggg                               <  2:9272386/93‑1 (MQ=255)
                                                          cgcCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtggg                               <  2:2568984/93‑1 (MQ=255)
                                                           gcCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtgggt                              <  1:6870923/93‑1 (MQ=255)
                                                           gcCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtgggt                              <  2:2289110/93‑1 (MQ=255)
                                                           gcCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAAAGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtgggt                              <  2:5195445/93‑1 (MQ=255)
                                                             cAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCgtgggtgg                            <  2:5355277/93‑1 (MQ=255)
                                                              aaaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGa                           >  2:1757894/1‑93 (MQ=255)
                                                              aaaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGa                           <  1:5873651/93‑1 (MQ=255)
                                                              aaaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGa                           >  2:3397975/1‑93 (MQ=255)
                                                              aaaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGa                           <  2:2813299/93‑1 (MQ=255)
                                                               aaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAg                          <  1:7591125/93‑1 (MQ=255)
                                                               aaGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAg                          >  2:8257578/1‑93 (MQ=255)
                                                                aGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGc                         >  2:1608873/1‑93 (MQ=255)
                                                                 gCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTTATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCt                        >  1:9724916/1‑93 (MQ=255)
                                                                 gCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCt                        >  1:6489520/1‑93 (MQ=255)
                                                                   ggACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGa                      >  2:570491/1‑93 (MQ=255)
                                                                    gACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGAt                     <  1:891202/93‑1 (MQ=255)
                                                                      cTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATaa                   <  1:4415173/93‑1 (MQ=255)
                                                                      cTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATaa                   >  1:1752667/1‑93 (MQ=255)
                                                                       tGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAc                  <  2:7349666/93‑1 (MQ=255)
                                                                        gCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAcc                 <  1:1387242/93‑1 (MQ=255)
                                                                              aGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAccagccag           >  2:8208023/1‑93 (MQ=255)
                                                                               gATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGa          >  1:8782953/1‑93 (MQ=255)
                                                                                     gCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTg    <  1:3665939/93‑1 (MQ=255)
                                                                                     gCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTg    >  1:4090702/1‑93 (MQ=255)
                                                                                     gCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTg    <  2:6109581/93‑1 (MQ=255)
                                                                                     gCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTg    >  2:4541321/1‑93 (MQ=255)
                                                                                       ttCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAg  <  2:2021337/93‑1 (MQ=255)
                                                                                       ttCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAg  >  2:4721649/1‑93 (MQ=255)
                                                                                          |                                                                                         
TCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAG  >  NC_000913/3923767‑3923946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 281 total aligned reads displayed.
GCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAG  >  NC_000913/3923764‑3923950
                                                                                             |                                                                                             
GCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCC                                                                                               <  SRR4302540.7376464/94‑1 (MQ=60)
GCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCC                                                                                               <  SRR4302540.9779121/94‑1 (MQ=60)
GCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCC                                                                                               >  SRR4302540.209686/1‑94 (MQ=60)
 CCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGNGGNNTGCAGAAAGATCGGGCTTNCG                                                                                              >  SRR4302540.1699577/1‑94 (MQ=60)
 CCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCG                                                                                              <  SRR4302540.6559903/94‑1 (MQ=60)
  CTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGT                                                                                             >  SRR4302540.3299357/1‑94 (MQ=60)
  CTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGT                                                                                             <  SRR4302540.5877312/94‑1 (MQ=60)
   TCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTT                                                                                            <  SRR4302540.2496977/94‑1 (MQ=60)
    CGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTC                                                                                           >  SRR4302540.4194519/1‑94 (MQ=60)
     GAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCC                                                                                          >  SRR4302540.8497031/1‑94 (MQ=60)
     GAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCC                                                                                          >  SRR4302540.9137989/1‑94 (MQ=60)
     GAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCC                                                                                          >  SRR4302540.1415689/1‑94 (MQ=60)
      AGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCT                                                                                         <  SRR4302540.9561852/94‑1 (MQ=60)
      AGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACAGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCT                                                                                         <  SRR4302540.2941479/94‑1 (MQ=60)
       GTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTG                                                                                        >  SRR4302540.3627591/1‑94 (MQ=60)
       GTTTATCGATAGCCCCACAAAACGGGTCATATTCACGCCTCGCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTC                                                                                        >  SRR4302540.1647522/1‑94 (MQ=60)
        TTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGC                                                                                       <  SRR4302540.7667330/94‑1 (MQ=60)
          TATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAA                                                                                     <  SRR4302540.3828414/94‑1 (MQ=60)
          TATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAA                                                                                     >  SRR4302540.4253201/1‑94 (MQ=60)
           ATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAAT                                                                                    <  SRR4302540.2446237/94‑1 (MQ=60)
           ATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAAT                                                                                    <  SRR4302540.9887881/94‑1 (MQ=60)
           ATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAAT                                                                                    <  SRR4302540.4757789/94‑1 (MQ=60)
           AGCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAAT                                                                                    <  SRR4302540.8594806/94‑1 (MQ=60)
             CGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGC                                                                                  >  SRR4302540.4711634/1‑94 (MQ=60)
              GATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCT                                                                                 >  SRR4302540.8696185/1‑94 (MQ=60)
              GATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCT                                                                                 <  SRR4302540.9358514/94‑1 (MQ=60)
               ATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTT                                                                                >  SRR4302540.1261068/1‑94 (MQ=60)
               ATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTT                                                                                >  SRR4302540.7925001/1‑94 (MQ=60)
               ATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTT                                                                                >  SRR4302540.7213052/1‑94 (MQ=60)
               ATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTT                                                                                <  SRR4302540.7468843/94‑1 (MQ=60)
                AAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTC                                                                               <  SRR4302540.3389540/94‑1 (MQ=60)
                 AGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCA                                                                              >  SRR4302540.1679712/1‑94 (MQ=60)
                   CCCAACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATA                                                                            <  SRR4302540.7094956/94‑1 (MQ=60)
                    CCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAG                                                                           <  SRR4302540.9720377/94‑1 (MQ=60)
                    CCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAG                                                                           <  SRR4302540.8929903/94‑1 (MQ=60)
                    CCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAG                                                                           <  SRR4302540.3056391/94‑1 (MQ=60)
                    CCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAG                                                                           >  SRR4302540.6629779/1‑94 (MQ=60)
                    CCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAG                                                                           <  SRR4302540.8929902/94‑1 (MQ=60)
                    CACACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAG                                                                           <  SRR4302540.6881788/94‑1 (MQ=60)
                     CCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGA                                                                          <  SRR4302540.2531085/94‑1 (MQ=60)
                     CCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGA                                                                          >  SRR4302540.7250077/1‑94 (MQ=60)
                      CACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGATAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAA                                                                         >  SRR4302540.3516430/1‑94 (MQ=60)
                      CACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAA                                                                         <  SRR4302540.8775939/94‑1 (MQ=60)
                      CACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAA                                                                         >  SRR4302540.5842259/1‑94 (MQ=60)
                       ACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAA                                                                        <  SRR4302540.5254056/94‑1 (MQ=60)
                       ACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAA                                                                        <  SRR4302540.3022611/94‑1 (MQ=60)
                        CAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAG                                                                       <  SRR4302540.243851/94‑1 (MQ=60)
                        AAAAAGGTGTCATATTCACGACTGCAAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAG                                                                       <  SRR4302540.3874436/94‑1 (MQ=60)
                         AAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATCGAAAGA                                                                      >  SRR4302540.2294322/1‑94 (MQ=60)
                         AAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGG                                                                      >  SRR4302540.5588014/1‑94 (MQ=60)
                          AAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGA                                                                     >  SRR4302540.3160140/1‑94 (MQ=60)
                           AAGGTGTCATATACACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAG                                                                    <  SRR4302540.2158711/94‑1 (MQ=60)
                            AGGTTTCATATTCACGACTGCTAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGA                                                                   <  SRR4302540.10130632/94‑1 (MQ=60)
                             GGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGGAATGCTTCATAGAAAGGAGAA                                                                  >  SRR4302540.8404878/1‑94 (MQ=60)
                             GGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAA                                                                  <  SRR4302540.6782358/94‑1 (MQ=60)
                             GGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAA                                                                  <  SRR4302540.6358072/94‑1 (MQ=60)
                             GGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAA                                                                  <  SRR4302540.7419829/94‑1 (MQ=60)
                             GGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAA                                                                  <  SRR4302540.1105852/94‑1 (MQ=60)
                             GGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAA                                                                  >  SRR4302540.8404879/1‑94 (MQ=60)
                             GGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAA                                                                  <  SRR4302540.8092763/94‑1 (MQ=60)
                             GGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAA                                                                  <  SRR4302540.8000872/94‑1 (MQ=60)
                             GGTGTCATATTCACGACTGCCAATACCGATAGCGCCAAAGCGGACTGCAGAAAGATCGGGCTGCCGTTCCTGCAATGCTTCATAGAAAGGAGAA                                                                  <  SRR4302540.3949137/94‑1 (MQ=60)
                             GGTGTCATATTCACGACTGCAAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAA                                                                  <  SRR4302540.1187686/94‑1 (MQ=60)
                              GTGTCATATTCACGACTGCCAATACCGATTGGGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAA                                                                 <  SRR4302540.3369666/94‑1 (MQ=60)
                              GTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAA                                                                 >  SRR4302540.4982822/1‑94 (MQ=60)
                               TGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAG                                                                <  SRR4302540.1225408/94‑1 (MQ=60)
                               GGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAG                                                                <  SRR4302540.8080755/94‑1 (MQ=60)
                                GTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGG                                                               >  SRR4302540.4316898/1‑94 (MQ=60)
                                 TCATATTCACGACTGCCAATACCGGTTGCGCCAAAGCGGGCTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGT                                                              <  SRR4302540.3521162/94‑1 (MQ=60)
                                  CATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTT                                                             <  SRR4302540.5110520/94‑1 (MQ=60)
                                  CATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTT                                                             >  SRR4302540.3111200/1‑94 (MQ=60)
                                  CATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTT                                                             <  SRR4302540.5581585/94‑1 (MQ=60)
                                  CATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTT                                                             <  SRR4302540.4156516/94‑1 (MQ=60)
                                  CATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTT                                                             <  SRR4302540.206646/94‑1 (MQ=60)
                                   ATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTG                                                            <  SRR4302540.9185910/94‑1 (MQ=60)
                                   ATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTG                                                            <  SRR4302540.4836346/94‑1 (MQ=60)
                                   ATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTG                                                            >  SRR4302540.592058/1‑94 (MQ=60)
                                   ATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTG                                                            <  SRR4302540.6652326/94‑1 (MQ=60)
                                    TATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGGAAGATCTAGCTTCCGTTCCTGCCATGCTTCATAGAAAGGAGGAAGGTTGT                                                           >  SRR4302540.3737535/1‑94 (MQ=60)
                                    TATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGT                                                           >  SRR4302540.1466812/1‑94 (MQ=60)
                                     ATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTC                                                          <  SRR4302540.2687938/94‑1 (MQ=60)
                                     ATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTC                                                          >  SRR4302540.4524708/1‑94 (MQ=60)
                                     ATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTC                                                          <  SRR4302540.4906451/94‑1 (MQ=60)
                                      TTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCC                                                         >  SRR4302540.4471569/1‑94 (MQ=60)
                                      TTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCC                                                         <  SRR4302540.5774919/94‑1 (MQ=60)
                                      TTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCC                                                         <  SRR4302540.5984163/94‑1 (MQ=60)
                                      TTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCC                                                         <  SRR4302540.8055165/94‑1 (MQ=60)
                                      TTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCC                                                         >  SRR4302540.3930332/1‑94 (MQ=60)
                                      TTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCC                                                         <  SRR4302540.3789090/94‑1 (MQ=60)
                                       TCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCG                                                        <  SRR4302540.4983226/94‑1 (MQ=60)
                                        CACGACTACCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGG                                                       <  SRR4302540.7254936/94‑1 (MQ=60)
                                         ACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGA                                                      <  SRR4302540.9431835/94‑1 (MQ=60)
                                          CGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAA                                                     <  SRR4302540.6563452/94‑1 (MQ=60)
                                          CGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAA                                                     <  SRR4302540.5384811/94‑1 (MQ=60)
                                          CGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGGTGTCCGGAA                                                     >  SRR4302540.5362867/1‑94 (MQ=60)
                                           GACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAAT                                                    <  SRR4302540.10005710/94‑1 (MQ=60)
                                           GACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAAT                                                    <  SRR4302540.4662379/94‑1 (MQ=60)
                                           GACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAAT                                                    <  SRR4302540.3150371/94‑1 (MQ=60)
                                           GACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAAT                                                    <  SRR4302540.8056039/94‑1 (MQ=60)
                                            ACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATA                                                   <  SRR4302540.2440008/94‑1 (MQ=60)
                                             attccatgtgCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTGCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAT                                                  <  SRR4302540.1153369/84‑1 (MQ=60)
                                             CTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAT                                                  <  SRR4302540.10016038/94‑1 (MQ=60)
                                             CTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAT                                                  <  SRR4302540.401092/94‑1 (MQ=60)
                                             CTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAT                                                  <  SRR4302540.1116662/94‑1 (MQ=60)
                                             CTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAT                                                  >  SRR4302540.6083731/1‑94 (MQ=60)
                                             CTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAT                                                  <  SRR4302540.582281/94‑1 (MQ=60)
                                             CTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATAT                                                  >  SRR4302540.833125/1‑94 (MQ=60)
                                              TGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATC                                                 >  SRR4302540.6184045/1‑94 (MQ=60)
                                              TGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATC                                                 <  SRR4302540.5313118/94‑1 (MQ=60)
                                              TGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCAGGAATATC                                                 >  SRR4302540.6300715/1‑94 (MQ=60)
                                              TGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGGTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATC                                                 >  SRR4302540.6184044/1‑94 (MQ=60)
                                               GCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCT                                                <  SRR4302540.3449760/94‑1 (MQ=60)
                                               GCCAATACCGATTGCGCCAAAGCGAACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCATCATAGAAAGGAGAAAGGTTGTCCGGAATATCT                                                <  SRR4302540.9033521/94‑1 (MQ=60)
                                                CCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTC                                               >  SRR4302540.2239961/1‑94 (MQ=60)
                                                CCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTC                                               <  SRR4302540.9596299/94‑1 (MQ=60)
                                                 CAATTCCGATTGCGCCAAAGCGTACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCC                                              <  SRR4302540.5296109/94‑1 (MQ=60)
                                                 CAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCC                                              <  SRR4302540.8625476/94‑1 (MQ=60)
                                                 CAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCC                                              >  SRR4302540.9073693/1‑94 (MQ=60)
                                                 CAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCC                                              <  SRR4302540.7701052/94‑1 (MQ=60)
                                                 CAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCC                                              >  SRR4302540.545260/1‑94 (MQ=60)
                                                 CAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCC                                              >  SRR4302540.319647/1‑94 (MQ=60)
                                                  AATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCG                                             <  SRR4302540.1311820/94‑1 (MQ=60)
                                                  AATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCG                                             <  SRR4302540.1311818/94‑1 (MQ=60)
                                                  AATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCG                                             >  SRR4302540.7263522/1‑94 (MQ=60)
                                                  AATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCG                                             >  SRR4302540.4577141/1‑94 (MQ=60)
                                                  AATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCG                                             <  SRR4302540.5841341/94‑1 (MQ=60)
                                                     ACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCC                                          >  SRR4302540.4901019/1‑94 (MQ=60)
                                                      CCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCAC                                         <  SRR4302540.379543/94‑1 (MQ=60)
                                                      CCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCAC                                         <  SRR4302540.379545/94‑1 (MQ=60)
                                                      CCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCAC                                         <  SRR4302540.6627367/94‑1 (MQ=60)
                                                       CGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACC                                        <  SRR4302540.2219946/94‑1 (MQ=60)
                                                       CGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACC                                        <  SRR4302540.8920606/94‑1 (MQ=60)
                                                        GATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCG                                       <  SRR4302540.4662078/94‑1 (MQ=60)
                                                        GATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCG                                       >  SRR4302540.4308224/1‑94 (MQ=60)
                                                         ATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGT                                      >  SRR4302540.6402302/1‑94 (MQ=60)
                                                          TTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTG                                     >  SRR4302540.9466474/1‑94 (MQ=60)
                                                           TGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGG                                    <  SRR4302540.6292997/94‑1 (MQ=60)
                                                           TGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGG                                    <  SRR4302540.6292996/94‑1 (MQ=60)
                                                            GCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGG                                   <  SRR4302540.3804183/94‑1 (MQ=60)
                                                            GCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGG                                   <  SRR4302540.717443/94‑1 (MQ=60)
                                                            GCGCCAAAGCGGACGGCAGAAAGATCCGGCTTCCGTTCCTGCCATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGG                                   <  SRR4302540.1643136/94‑1 (MQ=60)
                                                             CGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGT                                  <  SRR4302540.66966/94‑1 (MQ=60)
                                                             CGCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGT                                  <  SRR4302540.7723128/94‑1 (MQ=60)
                                                              GCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTG                                 >  SRR4302540.1269350/1‑94 (MQ=60)
                                                              GCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTG                                 <  SRR4302540.6511090/94‑1 (MQ=60)
                                                              GCCAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTG                                 <  SRR4302540.6947085/94‑1 (MQ=60)
                                                                CAAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGA                               <  SRR4302540.6540601/94‑1 (MQ=60)
                                                                 AAAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAG                              <  SRR4302540.5938577/94‑1 (MQ=60)
                                                                  AAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGC                             <  SRR4302540.7676388/94‑1 (MQ=60)
                                                                  AAGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGC                             <  SRR4302540.7676389/94‑1 (MQ=60)
                                                                   AGCGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTTATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCT                            >  SRR4302540.9839143/1‑94 (MQ=60)
                                                                     CGGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGA                          <  SRR4302540.886555/94‑1 (MQ=60)
                                                                      GGACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGAT                         >  SRR4302540.2782229/1‑94 (MQ=60)
                                                                      GGACTGCAGAAAGATCAGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGCGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGAT                         <  SRR4302540.9671479/94‑1 (MQ=60)
                                                                       GACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATA                        <  SRR4302540.900675/94‑1 (MQ=60)
                                                                       GACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATA                        <  SRR4302540.309928/94‑1 (MQ=60)
                                                                        ACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAA                       >  SRR4302540.1792824/1‑94 (MQ=60)
                                                                        ACTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAA                       >  SRR4302540.1771656/1‑94 (MQ=60)
                                                                         CTGCAGAAGGATCGGGCTTCCGTTCCTGCAATGCTTCCTAGAAAGGAGACAGGTTGGCCGGAATATCTCCGGCACCGTGGGGGGGGCTGGTAAC                      >  SRR4302540.1062924/1‑94 (MQ=60)
                                                                         CTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAC                      >  SRR4302540.429546/1‑94 (MQ=60)
                                                                         CTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAC                      >  SRR4302540.1062587/1‑94 (MQ=60)
                                                                         CTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAC                      <  SRR4302540.2914169/94‑1 (MQ=60)
                                                                         CTGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAAC                      <  SRR4302540.4463022/94‑1 (MQ=60)
                                                                          TGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACC                     <  SRR4302540.8826699/94‑1 (MQ=60)
                                                                          TGCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACC                     <  SRR4302540.1639098/94‑1 (MQ=60)
                                                                           GCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCA                    >  SRR4302540.6570966/1‑94 (MQ=60)
                                                                           GCAGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCA                    <  SRR4302540.423465/94‑1 (MQ=60)
                                                                             AGAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGC                  <  SRR4302540.8491157/94‑1 (MQ=60)
                                                                              GAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC                 <  SRR4302540.482842/94‑1 (MQ=60)
                                                                              GAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC                 >  SRR4302540.6731978/1‑94 (MQ=60)
                                                                              GAAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCC                 <  SRR4302540.5573963/94‑1 (MQ=60)
                                                                               AAAGATCGGGCTTGCGTTCCTGCAATGCTTCATAGAAAGGATAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCA                <  SRR4302540.2026766/94‑1 (MQ=60)
                                                                               AAAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCTGAATATCTCCGGCTCCGTGGGTGGAGCTGATAACCAGCCA                <  SRR4302540.2677472/94‑1 (MQ=60)
                                                                                AAGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAG               <  SRR4302540.1190229/94‑1 (MQ=60)
                                                                                 AGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGA              <  SRR4302540.5427223/94‑1 (MQ=60)
                                                                                 AGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGA              >  SRR4302540.3682418/1‑94 (MQ=60)
                                                                                 AGATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGA              >  SRR4302540.8884622/1‑94 (MQ=60)
                                                                                  GATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGAT             <  SRR4302540.5959770/94‑1 (MQ=60)
                                                                                  GATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGAT             <  SRR4302540.5959776/94‑1 (MQ=60)
                                                                                  GATCGGGCGTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGAT             <  SRR4302540.2051068/94‑1 (MQ=60)
                                                                                   ATCGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATC            <  SRR4302540.9095827/94‑1 (MQ=60)
                                                                                     CGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCC          >  SRR4302540.1433999/1‑94 (MQ=60)
                                                                                     CGGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCC          <  SRR4302540.8839708/94‑1 (MQ=60)
                                                                                      GGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCT         <  SRR4302540.417015/94‑1 (MQ=60)
                                                                                      GGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCT         >  SRR4302540.6182723/1‑94 (MQ=60)
                                                                                      GGGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCT         >  SRR4302540.8373914/1‑94 (MQ=60)
                                                                                       GGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTG        >  SRR4302540.4134830/1‑94 (MQ=60)
                                                                                       GGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTG        <  SRR4302540.4055259/94‑1 (MQ=60)
                                                                                       GGCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTG        >  SRR4302540.6804982/1‑94 (MQ=60)
                                                                                        GCTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGA       <  SRR4302540.9194811/94‑1 (MQ=60)
                                                                                         CTTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAG      >  SRR4302540.7995804/1‑94 (MQ=60)
                                                                                          TTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGG     >  SRR4302540.9305381/1‑94 (MQ=60)
                                                                                          TTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGG     <  SRR4302540.6878707/94‑1 (MQ=60)
                                                                                          TTCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGG     <  SRR4302540.3383765/94‑1 (MQ=60)
                                                                                           TCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGC    >  SRR4302540.7095629/1‑94 (MQ=60)
                                                                                           TCCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGC    <  SRR4302540.49255/94‑1 (MQ=60)
                                                                                            CCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCA   >  SRR4302540.9328302/1‑94 (MQ=60)
                                                                                            CCGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCA   <  SRR4302540.8230296/94‑1 (MQ=60)
                                                                                            CCGTTCCGGCAATTCTTCATAGAAAGGAGGAAGGGTGGCCGGGATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCA   <  SRR4302540.3638265/94‑1 (MQ=60)
                                                                                             CGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAG  >  SRR4302540.4510197/1‑94 (MQ=60)
                                                                                             |                                                                                             
GCCTCGAGTTTATCGATAGCCCCACAAAAGGTGTCATATTCACGACTGCCAATACCGATTGCGCCAAAGCGGACTGCAGAAAGATCGGGCTTCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAG  >  NC_000913/3923764‑3923950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑