Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,948,221	A→G	A13A (GCA→GCG)	ilvG →	acetolactate synthase II large subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,948,221	0	A	G	99.8%	1410.9 / ‑5.6	441	A13A (GCA→GCG)	ilvG	acetolactate synthase II large subunit
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (179/260); total (179/262)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01

Only 100 of 468 total aligned reads displayed.

TGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCT  >  NC_000913/3948131‑3948310

  aaTAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAgg                                                                                       >  1:6748359/1‑93 (MQ=255)

   aTAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACGGTGGGTGGTACATGCGTTGCGGGCGCAggg                                                                                      >  2:2548900/1‑93 (MQ=255)

   aTAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAggg                                                                                      >  2:7511965/1‑93 (MQ=255)

    tAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGgt                                                                                     >  1:2800569/1‑93 (MQ=255)

     aaCAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGgtg                                                                                    <  1:5441644/93‑1 (MQ=255)

     aaCAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGgtg                                                                                    <  1:2047837/93‑1 (MQ=255)

      aCAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGgggt                                                                                   >  2:7768760/1‑93 (MQ=255)

        aGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGa                                                                                 <  2:1476957/93‑1 (MQ=255)

         gCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGaa                                                                                <  1:4669023/93‑1 (MQ=255)

            caAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAacac                                                                             <  1:1748843/93‑1 (MQ=255)

             aaaaTTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACAcc                                                                            >  2:2786547/1‑93 (MQ=255)

              aaaTTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCg                                                                           >  2:6811032/1‑93 (MQ=255)

                 ttCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGttt                                                                        <  2:4214501/93‑1 (MQ=255)

                 ttCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGttt                                                                        >  2:1367484/1‑93 (MQ=255)

                 ttCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGttt                                                                        <  1:961642/93‑1 (MQ=255)

                 atCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGttt                                                                        <  1:8904266/92‑1 (MQ=255)

                  tCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGTTGTGAACACCGtttt                                                                       <  2:1065618/93‑1 (MQ=255)

                  tCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGtttt                                                                       <  1:1843842/93‑1 (MQ=255)

                  tCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGtttt                                                                       >  2:8061649/1‑93 (MQ=255)

                  tCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGtttt                                                                       <  1:5316979/93‑1 (MQ=255)

                   cTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTc                                                                      <  2:8924926/93‑1 (MQ=255)

                        tctcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTa                                                                 <  1:7969766/93‑1 (MQ=255)

                          tcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATc                                                               <  2:6094709/93‑1 (MQ=255)

                          tcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATc                                                               >  1:9041593/1‑93 (MQ=255)

                           cAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATcc                                                              <  2:1562120/93‑1 (MQ=255)

                            aaGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCg                                                             <  2:8665042/93‑1 (MQ=255)

                            aaGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCg                                                             >  2:5868426/1‑93 (MQ=255)

                            aaGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCg                                                             >  1:6232722/1‑93 (MQ=255)

                            aaGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCg                                                             <  1:2584247/93‑1 (MQ=255)

                             aGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCgg                                                            <  1:4873844/93‑1 (MQ=255)

                             aGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCgg                                                            <  1:6073191/93‑1 (MQ=255)

                             aGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCgg                                                            >  1:2764063/1‑93 (MQ=255)

                              gATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCggg                                                           >  2:7896877/1‑93 (MQ=255)

                                ttCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTg                                                         >  1:1248585/1‑93 (MQ=255)

                                ttCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTg                                                         >  2:9444568/1‑93 (MQ=255)

                                ttCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTg                                                         <  2:9569573/93‑1 (MQ=255)

                                ttCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTg                                                         >  1:3451847/1‑93 (MQ=255)

                                 tCAGGACGGGGAACTAACTATGAATTGCGCACAGTGGGGGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCgggggg                                                        >  2:4662030/1‑93 (MQ=255)

                                    ggACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGgcgc                                                     <  1:7504169/93‑1 (MQ=255)

                                      aCGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCaa                                                   >  1:7189668/1‑93 (MQ=255)

                                      aCGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCaa                                                   >  2:3709467/1‑93 (MQ=255)

                                      aCGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCaa                                                   <  1:8770911/93‑1 (MQ=255)

                                         gggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                <  2:6732358/93‑1 (MQ=255)

                                         gggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                <  2:9633665/93‑1 (MQ=255)

                                         gggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                <  1:106165/93‑1 (MQ=255)

                                         gggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                <  1:3053986/93‑1 (MQ=255)

                                         gggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                <  1:8451300/93‑1 (MQ=255)

                                         gggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                <  1:7603340/93‑1 (MQ=255)

                                         gggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                <  1:1418173/93‑1 (MQ=255)

                                         gggAACTAACTATGAATGGCGCAAAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                <  2:5555690/93‑1 (MQ=255)

                                           gAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATg                                              <  1:475835/93‑1 (MQ=255)

                                            aactatctATGAATGGCGCGCAGTGGGTGGTACAGGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGc                                             <  1:805755/93‑1 (MQ=255)

                                            aactaactATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGc                                             <  1:1536054/93‑1 (MQ=255)

                                            aactaactATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGc                                             <  2:8574999/93‑1 (MQ=255)

                                            aactaactATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGc                                             <  1:5852840/93‑1 (MQ=255)

                                             actaactaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGcc                                            <  2:924674/93‑1 (MQ=255)

                                                aactaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGt                                         >  1:9732983/1‑93 (MQ=255)

                                                aactaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGt                                         <  2:8360137/93‑1 (MQ=255)

                                                  ctaTGAATGGCGCACAGTGGGTGGTACATGCGTTGGGGGCGCAGGGTGGGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGttt                                       <  1:2345988/93‑1 (MQ=255)

                                                  ctaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGttt                                       <  2:2960228/93‑1 (MQ=255)

                                                   taTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTa                                      >  2:9518092/1‑93 (MQ=255)

                                                   taTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTa                                      >  1:4514356/1‑93 (MQ=255)

                                                   taTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTa                                      >  2:690999/1‑93 (MQ=255)

                                                      gAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGa                                   <  2:5285468/93‑1 (MQ=255)

                                                      gAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGa                                   <  2:3522537/93‑1 (MQ=255)

                                                          ggCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGGCGGGTTACGATGCa                               >  1:6586536/1‑93 (MQ=255)

                                                              cacaGAGGGCGGTACATGCGTTGCGGGCGCAGGCAGTGAACACCGTTTTCGGTTATACGGGTGGCGCAATTATGCCGGTTTACGATGCATAGt                           >  2:2089673/1‑93 (MQ=255)

                                                               acaGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTa                          <  1:4569669/93‑1 (MQ=255)

                                                               acaGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTa                          <  1:3288247/93‑1 (MQ=255)

                                                               acaGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTa                          >  1:5016103/1‑93 (MQ=255)

                                                               acaGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTa                          >  1:3961328/1‑93 (MQ=255)

                                                                 aGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATg                        >  1:3144304/1‑93 (MQ=255)

                                                                 aGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATg                        <  2:6634810/93‑1 (MQ=255)

                                                                   tgggtggTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAc                      <  2:2236493/93‑1 (MQ=255)

                                                                   tgggtggTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAc                      <  1:5730681/93‑1 (MQ=255)

                                                                   tgggtggTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAc                      >  2:1828414/1‑93 (MQ=255)

                                                                    gggtggTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcg                     <  2:9837329/93‑1 (MQ=255)

                                                                    gggtggTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcg                     <  2:4540500/93‑1 (MQ=255)

                                                                    gggtggTACATGCGTTGCGGCCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcg                     <  2:1296616/93‑1 (MQ=255)

                                                                     ggtggtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcgg                    >  1:7749681/1‑93 (MQ=255)

                                                                      gtggtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcggc                   <  2:4447151/93‑1 (MQ=255)

                                                                       tggtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTCGCGCAATTATGCCGGTTTACGATGCATTGCATGAcggcg                  >  1:9412810/1‑93 (MQ=255)

                                                                        ggtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcggcgg                 <  1:3685294/93‑1 (MQ=255)

                                                                         gtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACggcggc                >  2:5366252/1‑93 (MQ=255)

                                                                         gtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACggcggc                <  2:3451227/93‑1 (MQ=255)

                                                                            cATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTg             >  2:5698928/1‑93 (MQ=255)

                                                                            cATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTg             <  1:5611744/93‑1 (MQ=255)

                                                                            cATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTg             <  2:5175384/93‑1 (MQ=255)

                                                                             aTGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTgg            >  2:4921120/1‑93 (MQ=255)

                                                                             aTGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTgg            <  2:9097683/93‑1 (MQ=255)

                                                                              tGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGa           <  1:9973790/93‑1 (MQ=255)

                                                                              tGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGa           <  1:9137713/93‑1 (MQ=255)

                                                                              tGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGa           >  1:6980631/1‑93 (MQ=255)

                                                                              tGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGa           >  1:3830823/1‑93 (MQ=255)

                                                                                  ttGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCAc       >  2:7192267/1‑93 (MQ=255)

                                                                                  ttGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCAc       <  1:6362876/93‑1 (MQ=255)

                                                                                  ttGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCAc       <  1:435846/93‑1 (MQ=255)

                                                                                    gCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACtt     >  2:8217107/1‑93 (MQ=255)

                                                                                    gCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACtt     <  2:7031179/93‑1 (MQ=255)

                                                                                       ggCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCt  >  2:6494480/1‑93 (MQ=255)

TGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCT  >  NC_000913/3948131‑3948310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 258 total aligned reads displayed.

CAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTATGC  >  NC_000913/3948128‑3948314

CAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCG                                                                                               >  SRR4302540.7822601/1‑94 (MQ=60)

CAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCG                                                                                               >  SRR4302540.1207771/1‑94 (MQ=60)

 AATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGC                                                                                              >  SRR4302540.7732481/1‑94 (MQ=60)

 AATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGC                                                                                              <  SRR4302540.172558/94‑1 (MQ=60)

 AATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGC                                                                                              >  SRR4302540.1709529/1‑94 (MQ=60)

 AATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGC                                                                                              >  SRR4302540.4203102/1‑94 (MQ=60)

  ATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCA                                                                                             <  SRR4302540.8351963/94‑1 (MQ=60)

  ATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCA                                                                                             <  SRR4302540.3014173/94‑1 (MQ=60)

   TGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACCTGCGTTGCGGGCGCAG                                                                                            >  SRR4302540.1584770/1‑94 (MQ=60)

   TGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAG                                                                                            <  SRR4302540.9118250/94‑1 (MQ=60)

    GAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGG                                                                                           >  SRR4302540.6822922/1‑94 (MQ=60)

      ATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGT                                                                                         >  SRR4302540.7821254/1‑94 (MQ=60)

      ATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGT                                                                                         <  SRR4302540.7843474/94‑1 (MQ=60)

      ATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGG                                                                                         >  SRR4302540.3372536/1‑94 (MQ=60)

       TAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTG                                                                                        <  SRR4302540.2532028/94‑1 (MQ=60)

       TAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTG                                                                                        <  SRR4302540.5177594/94‑1 (MQ=60)

        AACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGT                                                                                       >  SRR4302540.5296208/1‑94 (MQ=60)

        AACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGT                                                                                       <  SRR4302540.3136347/94‑1 (MQ=60)

          CAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGA                                                                                     >  SRR4302540.3990311/1‑94 (MQ=60)

          CAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGA                                                                                     >  SRR4302540.2887589/1‑94 (MQ=60)

            GCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAAC                                                                                   <  SRR4302540.4718997/94‑1 (MQ=60)

            GCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAAC                                                                                   <  SRR4302540.5163397/94‑1 (MQ=60)

            GCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAAC                                                                                   <  SRR4302540.8683311/94‑1 (MQ=60)

            GCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAAC                                                                                   <  SRR4302540.9765667/94‑1 (MQ=60)

             CACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACA                                                                                  >  SRR4302540.5067011/1‑94 (MQ=60)

             CACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACA                                                                                  >  SRR4302540.5723715/1‑94 (MQ=60)

             CACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACA                                                                                  >  SRR4302540.4589914/1‑94 (MQ=60)

              ACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAACAGCGCACAGTGGGAGGTACATGCGTTGTGGGCGACGGGTGTGAACAC                                                                                 >  SRR4302540.2762807/1‑94 (MQ=60)

               CAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACC                                                                                <  SRR4302540.1767785/94‑1 (MQ=60)

               CAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACC                                                                                <  SRR4302540.2574780/94‑1 (MQ=60)

                AAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCG                                                                               <  SRR4302540.63286/94‑1 (MQ=60)

                AAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGGGTGAACACCG                                                                               >  SRR4302540.312477/1‑94 (MQ=60)

                AAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGGACATGCGTTGCGGGCGCAGGGTGTGAACACCG                                                                               >  SRR4302540.1675261/1‑94 (MQ=60)

                 AAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGT                                                                              <  SRR4302540.5847245/94‑1 (MQ=60)

                  AATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTT                                                                             <  SRR4302540.5816628/94‑1 (MQ=60)

                   ATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTT                                                                            <  SRR4302540.5506091/94‑1 (MQ=60)

                   ATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTT                                                                            >  SRR4302540.3638492/1‑94 (MQ=60)

                   ATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTT                                                                            <  SRR4302540.4139663/94‑1 (MQ=60)

                    TTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTT                                                                           <  SRR4302540.971591/94‑1 (MQ=60)

                    ATCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTT                                                                           <  SRR4302540.9007359/94‑1 (MQ=60)

                     TCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTC                                                                          <  SRR4302540.5375195/94‑1 (MQ=60)

                     TCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTC                                                                          <  SRR4302540.1864044/94‑1 (MQ=60)

                     TCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTC                                                                          <  SRR4302540.4787088/94‑1 (MQ=60)

                      TTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCG                                                                         <  SRR4302540.4595496/94‑1 (MQ=60)

                      CTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCG                                                                         >  SRR4302540.27258/1‑94 (MQ=60)

                      CTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCG                                                                         <  SRR4302540.7097410/94‑1 (MQ=60)

                       TGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGG                                                                        >  SRR4302540.8527766/1‑94 (MQ=60)

                       TGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGG                                                                        <  SRR4302540.4564937/94‑1 (MQ=60)

                         TTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTT                                                                      >  SRR4302540.6043470/1‑94 (MQ=60)

                          TTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTA                                                                     <  SRR4302540.5668760/94‑1 (MQ=60)

                            CTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATC                                                                   >  SRR4302540.9150125/1‑94 (MQ=60)

                             TCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCC                                                                  <  SRR4302540.7211413/94‑1 (MQ=60)

                             TCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCC                                                                  >  SRR4302540.9147090/1‑94 (MQ=60)

                             TCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCC                                                                  <  SRR4302540.5442073/94‑1 (MQ=60)

                              CAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCG                                                                 <  SRR4302540.8556566/94‑1 (MQ=60)

                              CAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCG                                                                 >  SRR4302540.2872122/1‑94 (MQ=60)

                              CAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCG                                                                 >  SRR4302540.2532819/1‑94 (MQ=60)

                              CAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCG                                                                 <  SRR4302540.5742039/94‑1 (MQ=60)

                              CAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCG                                                                 >  SRR4302540.6302041/1‑94 (MQ=60)

                               AAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGG                                                                >  SRR4302540.4698308/1‑94 (MQ=60)

                               AAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGG                                                                >  SRR4302540.2793929/1‑94 (MQ=60)

                               AAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGG                                                                <  SRR4302540.8956359/94‑1 (MQ=60)

                               AAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGG                                                                <  SRR4302540.7956820/94‑1 (MQ=60)

                                AGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGG                                                               <  SRR4302540.6726139/94‑1 (MQ=60)

                                AGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGG                                                               <  SRR4302540.4926142/94‑1 (MQ=60)

                                AGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGG                                                               >  SRR4302540.2088235/1‑94 (MQ=60)

                                AGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGG                                                               <  SRR4302540.9687889/94‑1 (MQ=60)

                                AGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGG                                                               <  SRR4302540.6140721/94‑1 (MQ=60)

                                AGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGG                                                               >  SRR4302540.6170284/1‑94 (MQ=60)

                                AGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGG                                                               >  SRR4302540.2140779/1‑94 (MQ=60)

                                 GATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGT                                                              <  SRR4302540.7555971/94‑1 (MQ=60)

                                  ATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACATCGTTTTCGGTTATCCGGGTG                                                             <  SRR4302540.9858567/94‑1 (MQ=60)

                                  ATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTG                                                             <  SRR4302540.3700178/94‑1 (MQ=60)

                                  ATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTG                                                             <  SRR4302540.3860648/94‑1 (MQ=60)

                                  ATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTG                                                             >  SRR4302540.3489394/1‑94 (MQ=60)

                                  ATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTG                                                             >  SRR4302540.1261334/1‑94 (MQ=60)

                                    TCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGC                                                           <  SRR4302540.3167681/94‑1 (MQ=60)

                                    TCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGC                                                           <  SRR4302540.9134386/94‑1 (MQ=60)

                                     CAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCG                                                          >  SRR4302540.2100148/1‑94 (MQ=60)

                                     CAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCG                                                          >  SRR4302540.181780/1‑94 (MQ=60)

                                     CAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCG                                                          <  SRR4302540.1993593/94‑1 (MQ=60)

                                       GGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCA                                                        <  SRR4302540.7588036/94‑1 (MQ=60)

                                       GGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCA                                                        <  SRR4302540.7588037/94‑1 (MQ=60)

                                        GACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAA                                                       >  SRR4302540.7269807/1‑94 (MQ=60)

                                         ACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAAT                                                      <  SRR4302540.8872549/94‑1 (MQ=60)

                                         ACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAAT                                                      >  SRR4302540.9175597/1‑94 (MQ=60)

                                          CGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATT                                                     <  SRR4302540.8116901/94‑1 (MQ=60)

                                          CGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATT                                                     <  SRR4302540.7635531/94‑1 (MQ=60)

                                           GGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGGGGCGCAATTA                                                    >  SRR4302540.168542/1‑94 (MQ=60)

                                            GTGAACTAACTATGAATGGCGCACAGTGTGTGATACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTAT                                                   <  SRR4302540.8549415/94‑1 (MQ=60)

                                            GGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTAT                                                   <  SRR4302540.7780959/94‑1 (MQ=60)

                                            GGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTAT                                                   <  SRR4302540.2866386/94‑1 (MQ=60)

                                            GGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTAT                                                   <  SRR4302540.148081/94‑1 (MQ=60)

                                            GGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTAT                                                   <  SRR4302540.8549416/94‑1 (MQ=60)

                                            GGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTAT                                                   <  SRR4302540.8365632/94‑1 (MQ=60)

                                            GGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTAT                                                   <  SRR4302540.1296815/94‑1 (MQ=60)

                                            GGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTAT                                                   <  SRR4302540.3087495/94‑1 (MQ=60)

                                            GGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTAT                                                   <  SRR4302540.4499515/94‑1 (MQ=60)

                                            GGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTAT                                                   <  SRR4302540.7688771/94‑1 (MQ=60)

                                            GGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTAT                                                   <  SRR4302540.107299/94‑1 (MQ=60)

                                             GGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATG                                                  >  SRR4302540.1467847/1‑94 (MQ=60)

                                             GGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATG                                                  <  SRR4302540.2806706/94‑1 (MQ=60)

                                              GAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGC                                                 <  SRR4302540.480929/94‑1 (MQ=60)

                                               AACTATCTATGAATGGCGCGCAGTGGGTGGTACAGGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCC                                                <  SRR4302540.814314/94‑1 (MQ=60)

                                               AACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCC                                                <  SRR4302540.1553044/94‑1 (MQ=60)

                                               AACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCC                                                <  SRR4302540.5917573/94‑1 (MQ=60)

                                               AACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCC                                                >  SRR4302540.7299851/1‑94 (MQ=60)

                                                  TAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGT                                             <  SRR4302540.1986816/94‑1 (MQ=60)

                                                  TAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGT                                             >  SRR4302540.9847271/1‑94 (MQ=60)

                                                   AACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGTGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTT                                            <  SRR4302540.4212013/94‑1 (MQ=60)

                                                   AACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTT                                            >  SRR4302540.1252770/1‑94 (MQ=60)

                                                   AACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTT                                            >  SRR4302540.8111120/1‑94 (MQ=60)

                                                    ACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTT                                           <  SRR4302540.6249469/94‑1 (MQ=60)

                                                    ACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTT                                           <  SRR4302540.328300/94‑1 (MQ=60)

                                                     CTATGAATGGCGCACAGTGGGTGGTACATGCGTTGGGGGCGCAGGGTGGGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTA                                          <  SRR4302540.2371259/94‑1 (MQ=60)

                                                     CTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTA                                          >  SRR4302540.4563265/1‑94 (MQ=60)

                                                     CTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTA                                          >  SRR4302540.918813/1‑94 (MQ=60)

                                                     CTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTA                                          >  SRR4302540.6097511/1‑94 (MQ=60)

                                                      TATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTAC                                         <  SRR4302540.6641455/94‑1 (MQ=60)

                                                         GAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGAT                                      <  SRR4302540.9465479/94‑1 (MQ=60)

                                                         GAATGGAGCACAGTGGGTGCTAAATACGTTGCGGGCTCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGAT                                      <  SRR4302540.7045490/94‑1 (MQ=60)

                                                            TGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGGCGGGTTACGATGCA                                   >  SRR4302540.6659493/1‑94 (MQ=60)

                                                             GGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCAT                                  <  SRR4302540.1502549/94‑1 (MQ=60)

                                                             GGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCAT                                  >  SRR4302540.1228253/1‑94 (MQ=60)

                                                              GCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATT                                 >  SRR4302540.4955483/1‑94 (MQ=60)

                                                              GCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATT                                 >  SRR4302540.4905806/1‑94 (MQ=60)

                                                               CGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTG                                >  SRR4302540.1923332/1‑94 (MQ=60)

                                                                GCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGT                               <  SRR4302540.7319233/94‑1 (MQ=60)

                                                                GCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGT                               <  SRR4302540.4822492/94‑1 (MQ=60)

                                                                 CACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTA                              >  SRR4302540.769981/1‑94 (MQ=60)

                                                                 CACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTA                              >  SRR4302540.5070412/1‑94 (MQ=60)

                                                                 CACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTA                              >  SRR4302540.3733361/1‑94 (MQ=60)

                                                                 CACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTA                              >  SRR4302540.6985349/1‑94 (MQ=60)

                                                                  ACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTAT                             <  SRR4302540.5792938/94‑1 (MQ=60)

                                                                  ACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTAT                             <  SRR4302540.3324215/94‑1 (MQ=60)

                                                                  ACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTAT                             <  SRR4302540.9832415/94‑1 (MQ=60)

                                                                  ACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTAT                             <  SRR4302540.9832414/94‑1 (MQ=60)

                                                                  ACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTAT                             <  SRR4302540.4412011/94‑1 (MQ=60)

                                                                  ACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTAT                             <  SRR4302540.4629405/94‑1 (MQ=60)

                                                                  ACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTAT                             <  SRR4302540.5036680/94‑1 (MQ=60)

                                                                  ACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTAT                             <  SRR4302540.6746877/94‑1 (MQ=60)

                                                                  ACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTAT                             <  SRR4302540.4618995/94‑1 (MQ=60)

                                                                   CAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATG                            <  SRR4302540.2807497/94‑1 (MQ=60)

                                                                   CAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATG                            <  SRR4302540.1433344/94‑1 (MQ=60)

                                                                   CAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATG                            >  SRR4302540.3178572/1‑94 (MQ=60)

                                                                    AGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGA                           >  SRR4302540.203240/1‑94 (MQ=60)

                                                                    AGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGA                           <  SRR4302540.5457458/94‑1 (MQ=60)

                                                                     GTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAC                          <  SRR4302540.9529664/94‑1 (MQ=60)

                                                                     GTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAC                          <  SRR4302540.3350384/94‑1 (MQ=60)

                                                                     GTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAC                          <  SRR4302540.5779880/94‑1 (MQ=60)

                                                                      TGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACG                         <  SRR4302540.5793792/94‑1 (MQ=60)

                                                                        GGTGGTACATGCGTTGCGGGCGCAGCGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGC                       <  SRR4302540.9630025/94‑1 (MQ=60)

                                                                        GGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGC                       <  SRR4302540.4750711/94‑1 (MQ=60)

                                                                        GGGGGTACATGCGTTGCGGGCGCAGGGTGTGAACACTGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGC                       <  SRR4302540.3949393/94‑1 (MQ=60)

                                                                         GTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCG                      <  SRR4302540.10060419/94‑1 (MQ=60)

                                                                         GTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCG                      <  SRR4302540.3914684/94‑1 (MQ=60)

                                                                         GTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCG                      <  SRR4302540.4251068/94‑1 (MQ=60)

                                                                          TGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGG                     <  SRR4302540.9241124/94‑1 (MQ=60)

                                                                          TGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGG                     >  SRR4302540.9870100/1‑94 (MQ=60)

                                                                          TGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGG                     >  SRR4302540.3199246/1‑94 (MQ=60)

                                                                           GGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGC                    <  SRR4302540.3725564/94‑1 (MQ=60)

                                                                            GTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACTGCGGCG                   >  SRR4302540.2614847/1‑94 (MQ=60)

                                                                            GTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCG                   >  SRR4302540.4717838/1‑94 (MQ=60)

                                                                            GTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCG                   <  SRR4302540.6687873/94‑1 (MQ=60)

                                                                            GTACATGCGTTGCGGGCGCAGGGTGTGAACACCGGTTTCGGTTATCCGCCTGGGGCAACTATGCTGGTTTAGGATGCATTGTATGACGGCGGCG                   >  SRR4302540.4859314/1‑94 (MQ=60)

                                                                              ACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTG                 >  SRR4302540.7880349/1‑94 (MQ=60)

                                                                              ACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTG                 <  SRR4302540.8849951/94‑1 (MQ=60)

                                                                              ACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTG                 <  SRR4302540.6152839/94‑1 (MQ=60)

                                                                              ACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTG                 >  SRR4302540.9425603/1‑94 (MQ=60)

                                                                              ACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTG                 >  SRR4302540.1793866/1‑94 (MQ=60)

                                                                              ACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTG                 >  SRR4302540.7880350/1‑94 (MQ=60)

                                                                               CATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGG                <  SRR4302540.5673476/94‑1 (MQ=60)

                                                                                ATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGA               >  SRR4302540.3872507/1‑94 (MQ=60)

                                                                                ATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGA               >  SRR4302540.7058174/1‑94 (MQ=60)

                                                                                 TGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAG              <  SRR4302540.9247510/94‑1 (MQ=60)

                                                                                 TGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAG              <  SRR4302540.10090118/94‑1 (MQ=60)

                                                                                  GCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGC             <  SRR4302540.9115408/94‑1 (MQ=60)

                                                                                  GCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGC             >  SRR4302540.5551881/1‑94 (MQ=60)

                                                                                  GCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGC             <  SRR4302540.2829092/94‑1 (MQ=60)

                                                                                   CGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCA            <  SRR4302540.6078372/94‑1 (MQ=60)

                                                                                    GTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCAC           >  SRR4302540.1412636/1‑94 (MQ=60)

                                                                                     TTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACT          <  SRR4302540.6433729/94‑1 (MQ=60)

                                                                                     TTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACT          <  SRR4302540.6433728/94‑1 (MQ=60)

                                                                                     TTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACT          <  SRR4302540.440466/94‑1 (MQ=60)

                                                                                      TGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTT         <  SRR4302540.3993864/94‑1 (MQ=60)

                                                                                      TGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTT         <  SRR4302540.6499945/94‑1 (MQ=60)

                                                                                      TGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTT         <  SRR4302540.5565847/94‑1 (MQ=60)

                                                                                       GCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTG        <  SRR4302540.5432965/94‑1 (MQ=60)

                                                                                         GGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCT      <  SRR4302540.3549418/94‑1 (MQ=60)

                                                                                          GGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTA     <  SRR4302540.8914985/94‑1 (MQ=60)

                                                                                          GGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTA     <  SRR4302540.6485610/94‑1 (MQ=60)

                                                                                          GGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTA     <  SRR4302540.3401068/94‑1 (MQ=60)

                                                                                           GCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTAT    <  SRR4302540.9447805/94‑1 (MQ=60)

                                                                                           GCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTAT    <  SRR4302540.1329760/94‑1 (MQ=60)

                                                                                           GCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTAT    <  SRR4302540.6289952/94‑1 (MQ=60)

                                                                                           GCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTAT    <  SRR4302540.4572519/94‑1 (MQ=60)

                                                                                            CGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACTATGCATTGTATGACGGCGGCGTGGAGCACTTGCTATG   >  SRR4302540.6920358/1‑94 (MQ=60)

                                                                                            CGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTATG   >  SRR4302540.7106264/1‑94 (MQ=60)

                                                                                             GCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTATGC  <  SRR4302540.7103979/94‑1 (MQ=60)

                                                                                             GCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTATGC  <  SRR4302540.5850171/94‑1 (MQ=60)

CAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTATGC  >  NC_000913/3948128‑3948314

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`