Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,549,566	A→G	D121G (GAC→GGC)	uxuA →	mannonate hydrolase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,549,566	0	A	G	100.0%	1101.4 / NA	340	D121G (GAC→GGC)	uxuA	mannonate hydrolase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (153/187); total (153/187)

Only 100 of 354 total aligned reads displayed.

ACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTAC  >  NC_000913/4549476‑4549654

aCCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCg                                                                                        >  1:8065268/1‑93 (MQ=255)

    tgcgcAGTGTGGCATTCGCACCGAGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTc                                                                                    <  2:2197658/92‑1 (MQ=255)

    ggCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTc                                                                                    <  2:600463/93‑1 (MQ=255)

        cAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCaaa                                                                                <  1:3775437/93‑1 (MQ=255)

         aGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAg                                                                               >  1:10017372/1‑93 (MQ=255)

         aGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAg                                                                               >  2:5820186/1‑93 (MQ=255)

          gtgtGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGc                                                                              <  1:5206939/93‑1 (MQ=255)

          gtgtGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGc                                                                              >  2:3012408/1‑93 (MQ=255)

           tgtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCCAAGct                                                                             >  2:5706640/1‑93 (MQ=255)

           tgtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGct                                                                             >  1:7331235/1‑93 (MQ=255)

           tgtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGct                                                                             >  1:4207022/1‑93 (MQ=255)

             tgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGctct                                                                           <  2:926429/93‑1 (MQ=255)

              ggCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTg                                                                          >  1:7135793/1‑93 (MQ=255)

               gCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTgc                                                                         <  2:4153586/93‑1 (MQ=255)

                  ttCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCt                                                                      >  2:2934108/1‑93 (MQ=255)

                  ttCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCt                                                                      >  2:4966006/1‑93 (MQ=255)

                   tCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCtt                                                                     <  2:1279112/93‑1 (MQ=255)

                    cGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTc                                                                    <  2:4664772/93‑1 (MQ=255)

                     gCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCg                                                                   <  2:9874488/93‑1 (MQ=255)

                     gCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCg                                                                   >  1:9046678/1‑93 (MQ=255)

                     gCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCg                                                                   >  2:8115786/1‑93 (MQ=255)

                     gCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCg                                                                   <  2:7542595/93‑1 (MQ=255)

                       aCCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGAc                                                                 >  2:1110343/1‑93 (MQ=255)

                        ccGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGAcc                                                                <  1:8658401/93‑1 (MQ=255)

                         cGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCa                                                               >  1:1753377/1‑93 (MQ=255)

                         cGTGCGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCa                                                               <  2:3551853/93‑1 (MQ=255)

                          gtgtGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAg                                                              >  1:4936095/1‑93 (MQ=255)

                           tgtgCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGa                                                             <  1:107671/93‑1 (MQ=255)

                           tgtgCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGCCTCCAAAGCTCTGCGCTTCGACCAGa                                                             <  2:8709903/93‑1 (MQ=255)

                             tgCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATc                                                           <  2:7490164/93‑1 (MQ=255)

                             tgCTACAACTCCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATc                                                           <  2:7186788/93‑1 (MQ=255)

                               cTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGa                                                         <  2:3795927/93‑1 (MQ=255)

                                tACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGaa                                                        >  2:6215344/1‑93 (MQ=255)

                                 aCAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATGCGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAt                                                       <  1:4614483/93‑1 (MQ=255)

                                 aCAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAt                                                       >  1:2085030/1‑93 (MQ=255)

                                  cAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAtt                                                      <  1:3270887/93‑1 (MQ=255)

                                  cAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAtt                                                      <  1:4851972/93‑1 (MQ=255)

                                  cAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAtt                                                      <  2:9479596/93‑1 (MQ=255)

                                   aaCTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTc                                                     <  2:3887398/93‑1 (MQ=255)

                                   aaCTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTc                                                     >  1:2675185/1‑93 (MQ=255)

                                    aCTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCg                                                    <  1:7823177/93‑1 (MQ=255)

                                    aCTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCg                                                    >  1:9880286/1‑93 (MQ=255)

                                      ttCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCt                                                  >  1:4010823/1‑93 (MQ=255)

                                      ttCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCt                                                  <  1:2340069/93‑1 (MQ=255)

                                        cATGCCGTTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGc                                                <  1:6181174/93‑1 (MQ=255)

                                        cATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGc                                                <  2:8810250/93‑1 (MQ=255)

                                        cATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGc                                                <  2:3938074/93‑1 (MQ=255)

                                         aTGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCa                                               >  1:8840711/1‑93 (MQ=255)

                                         aTGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCa                                               >  2:7749764/1‑93 (MQ=255)

                                           gCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCAtt                                             <  2:8943020/93‑1 (MQ=255)

                                            ccGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTc                                            <  2:5270757/93‑1 (MQ=255)

                                                ggCTAGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGaaa                                        <  2:6969662/92‑1 (MQ=255)

                                                 gCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAt                                       >  1:4522160/1‑93 (MQ=255)

                                                   tCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGc                                     >  2:2210668/1‑93 (MQ=255)

                                                   tCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGc                                     <  1:1528229/93‑1 (MQ=255)

                                                     gACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCat                                   >  1:1910840/1‑93 (MQ=255)

                                                     gACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCat                                   <  1:7634488/93‑1 (MQ=255)

                                                      aCTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCata                                  <  2:1387458/93‑1 (MQ=255)

                                                      aCTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCata                                  <  1:680040/93‑1 (MQ=255)

                                                        tGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATc                                >  2:321014/1‑93 (MQ=255)

                                                         ggACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATcc                               >  2:3704585/1‑93 (MQ=255)

                                                         ggACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATcc                               >  1:22243/1‑93 (MQ=255)

                                                          gACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCt                              <  1:4645019/93‑1 (MQ=255)

                                                            cccGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGa                            <  1:7475503/93‑1 (MQ=255)

                                                              cGTACTGCCCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGaaa                          <  2:4791886/93‑1 (MQ=255)

                                                              cGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGaca                          >  2:2672454/1‑91 (MQ=255)

                                                              cGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGaaa                          <  2:4381317/93‑1 (MQ=255)

                                                              cGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGaaa                          >  2:1596470/1‑93 (MQ=255)

                                                                 aCTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGc                       <  2:1485609/93‑1 (MQ=255)

                                                                  cTGTCCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGcc                      <  2:2471909/93‑1 (MQ=255)

                                                                  cTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGcc                      <  1:4079470/93‑1 (MQ=255)

                                                                  cTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGcc                      >  1:4343518/1‑93 (MQ=255)

                                                                   tGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGccc                     >  1:3358363/1‑93 (MQ=255)

                                                                    gACGTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCa                    <  1:3702223/93‑1 (MQ=255)

                                                                    gACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCa                    <  1:8429478/93‑1 (MQ=255)

                                                                    gACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCa                    >  2:5411449/1‑93 (MQ=255)

                                                                    gACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCa                    >  1:9675739/1‑93 (MQ=255)

                                                                      ccTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAgg                  >  2:5066811/1‑93 (MQ=255)

                                                                      ccTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAgg                  <  1:6693434/93‑1 (MQ=255)

                                                                       cTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgc                 <  2:7702364/93‑1 (MQ=255)

                                                                        tCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgcg                >  1:3072332/1‑93 (MQ=255)

                                                                        tCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgcg                >  1:829738/1‑93 (MQ=255)

                                                                        tCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgcg                <  2:8218985/93‑1 (MQ=255)

                                                                          gAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGcgcg              >  1:6472461/1‑93 (MQ=255)

                                                                            aTACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGa            <  1:4421396/93‑1 (MQ=255)

                                                                             tACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGag           >  1:6999492/1‑92 (MQ=255)

                                                                             tACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGaa           <  2:1764089/93‑1 (MQ=255)

                                                                               cGTGCTGCCAGGCGGCTCGAATGCTCTGCGCTTGGACCAGCTCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGc         <  2:2114498/93‑1 (MQ=255)

                                                                               cGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGc         >  2:7001829/1‑93 (MQ=255)

                                                                               cGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGc         >  2:964370/1‑93 (MQ=255)

                                                                                  gctgcCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGa      <  2:9698238/93‑1 (MQ=255)

                                                                                  gctgcCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAGTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGa      <  1:5462210/93‑1 (MQ=255)

                                                                                   ctgcCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAt     <  2:7363006/93‑1 (MQ=255)

                                                                                   ctgcCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAt     <  2:3312458/93‑1 (MQ=255)

                                                                                   ctgcCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAt     <  2:8393858/93‑1 (MQ=255)

                                                                                   ctgcCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAt     >  1:9240025/1‑93 (MQ=255)

                                                                                   ctgcCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAt     >  1:5806157/1‑93 (MQ=255)

                                                                                   ctgcCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAt     <  1:1282680/93‑1 (MQ=255)

                                                                                    tgcCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAtt    <  2:6464815/93‑1 (MQ=255)

                                                                                     gcCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTa   >  2:7808690/1‑93 (MQ=255)

ACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTAC  >  NC_000913/4549476‑4549654

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCAACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGA  >  NC_000913/4549473‑4549659

GCAACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGG                                                                                               <  SRR4302540.3138369/94‑1 (MQ=60)

GCAACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGG                                                                                               <  SRR4302540.8690131/94‑1 (MQ=60)

 CAACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGC                                                                                              >  SRR4302540.5853057/1‑94 (MQ=60)

 CAACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGC                                                                                              <  SRR4302540.4505065/94‑1 (MQ=60)

 CAACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGC                                                                                              >  SRR4302540.6358722/1‑94 (MQ=60)

 CAACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGC                                                                                              >  SRR4302540.6358724/1‑94 (MQ=60)

  AACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCG                                                                                             >  SRR4302540.8158867/1‑94 (MQ=60)

  AACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCG                                                                                             >  SRR4302540.4394072/1‑94 (MQ=60)

  AACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCG                                                                                             >  SRR4302540.9016430/1‑94 (MQ=60)

  AACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCG                                                                                             >  SRR4302540.658594/1‑94 (MQ=60)

   ACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGG                                                                                            >  SRR4302540.9428774/1‑94 (MQ=60)

     CTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCT                                                                                          <  SRR4302540.368962/94‑1 (MQ=60)

     CTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCT                                                                                          <  SRR4302540.4198614/94‑1 (MQ=60)

      TGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCATGCGGCTC                                                                                         >  SRR4302540.1385210/1‑94 (MQ=60)

      TGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTC                                                                                         >  SRR4302540.1385211/1‑94 (MQ=60)

       GGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCT                                                                                        >  SRR4302540.4988287/1‑94 (MQ=60)

         CGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAA                                                                                      >  SRR4302540.7162875/1‑94 (MQ=60)

          GCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAA                                                                                     <  SRR4302540.7623348/94‑1 (MQ=60)

           CAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAG                                                                                    <  SRR4302540.3816627/94‑1 (MQ=60)

           CAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAG                                                                                    >  SRR4302540.10133969/1‑94 (MQ=60)

            AGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGC                                                                                   <  SRR4302540.6799748/94‑1 (MQ=60)

             GTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCT                                                                                  >  SRR4302540.4252814/1‑94 (MQ=60)

             GTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCT                                                                                  <  SRR4302540.5263657/94‑1 (MQ=60)

             GTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCT                                                                                  >  SRR4302540.8497572/1‑94 (MQ=60)

             GTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCT                                                                                  >  SRR4302540.7413078/1‑94 (MQ=60)

              TGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTC                                                                                 >  SRR4302540.6996418/1‑94 (MQ=60)

               GTTGCATTCGCACCGTGGGCTACAACTGCAGGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCT                                                                                <  SRR4302540.2987215/94‑1 (MQ=60)

                TGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTG                                                                               >  SRR4302540.7215295/1‑94 (MQ=60)

                TGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTG                                                                               <  SRR4302540.9219069/94‑1 (MQ=60)

                 GGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGC                                                                              <  SRR4302540.2098805/94‑1 (MQ=60)

                 GGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGC                                                                              <  SRR4302540.3369749/94‑1 (MQ=60)

                 GGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGC                                                                              >  SRR4302540.4836804/1‑94 (MQ=60)

                   CATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGC                                                                            <  SRR4302540.3348381/94‑1 (MQ=60)

                    ATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCT                                                                           >  SRR4302540.2540098/1‑94 (MQ=60)

                    ATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCT                                                                           <  SRR4302540.2732474/94‑1 (MQ=60)

                     TTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTT                                                                          >  SRR4302540.2035503/1‑94 (MQ=60)

                       CGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCG                                                                        <  SRR4302540.4510382/94‑1 (MQ=60)

                       CGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCG                                                                        >  SRR4302540.9155277/1‑94 (MQ=60)

                       CGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCG                                                                        <  SRR4302540.126129/94‑1 (MQ=60)

                        GCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGA                                                                       >  SRR4302540.5953211/1‑94 (MQ=60)

                          ACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACC                                                                     >  SRR4302540.4997511/1‑94 (MQ=60)

                           CCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCA                                                                    >  SRR4302540.1772375/1‑94 (MQ=60)

                           CCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCA                                                                    <  SRR4302540.8758980/94‑1 (MQ=60)

                            CGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAG                                                                   >  SRR4302540.4989342/1‑94 (MQ=60)

                            CGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAG                                                                   >  SRR4302540.8168423/1‑94 (MQ=60)

                            CGTGTGCTACAACTTCATGCCGGGGCTCGACTGGACCCGTACTGACCTCGAATACGGGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAG                                                                   >  SRR4302540.4283284/1‑94 (MQ=60)

                             GTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGA                                                                  >  SRR4302540.3865422/1‑94 (MQ=60)

                              TGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGAT                                                                 <  SRR4302540.108826/94‑1 (MQ=60)

                               GTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATC                                                                <  SRR4302540.6301577/94‑1 (MQ=60)

                                TGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCG                                                               >  SRR4302540.1783362/1‑94 (MQ=60)

                                 GCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCCGATCGA                                                              >  SRR4302540.221539/1‑94 (MQ=60)

                                 GCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGA                                                              <  SRR4302540.2333112/94‑1 (MQ=60)

                                  CTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAA                                                             <  SRR4302540.3846510/94‑1 (MQ=60)

                                  CTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAA                                                             >  SRR4302540.7201802/1‑94 (MQ=60)

                                   TACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAT                                                            >  SRR4302540.3487449/1‑94 (MQ=60)

                                   TACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAT                                                            <  SRR4302540.6744337/94‑1 (MQ=60)

                                   TACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAT                                                            >  SRR4302540.2107429/1‑94 (MQ=60)

                                   CACAACTTCGTGCCCGTGCTCGACTGCACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGCCCAGATCGAAT                                                            <  SRR4302540.462028/94‑1 (MQ=60)

                                    ACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATGCGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATT                                                           <  SRR4302540.4663991/94‑1 (MQ=60)

                                    ACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATT                                                           <  SRR4302540.2001571/94‑1 (MQ=60)

                                    ACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATT                                                           >  SRR4302540.4080490/1‑94 (MQ=60)

                                     caaagtcatagcgggaatcgccgGGACCCGTACTGACCTCGAATACGTGCTGCTAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTC                                                          <  SRR4302540.5751779/71‑1 (MQ=60)

                                     CAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTC                                                          >  SRR4302540.2704147/1‑94 (MQ=60)

                                     CAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTC                                                          <  SRR4302540.5752050/94‑1 (MQ=60)

                                     CAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTC                                                          <  SRR4302540.2587742/94‑1 (MQ=60)

                                     CAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTC                                                          <  SRR4302540.4903968/94‑1 (MQ=60)

                                     CAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTC                                                          <  SRR4302540.3306590/94‑1 (MQ=60)

                                      AACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCG                                                         >  SRR4302540.7311269/1‑94 (MQ=60)

                                      AACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCG                                                         <  SRR4302540.6453196/94‑1 (MQ=60)

                                      AACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCG                                                         >  SRR4302540.9995663/1‑94 (MQ=60)

                                       ACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGC                                                        <  SRR4302540.7914599/94‑1 (MQ=60)

                                       ACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCACATCGAATTCGC                                                        >  SRR4302540.4751262/1‑94 (MQ=60)

                                        CTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCT                                                       >  SRR4302540.4054023/1‑94 (MQ=60)

                                        CTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCT                                                       >  SRR4302540.4054022/1‑94 (MQ=60)

                                        CTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCT                                                       >  SRR4302540.9241997/1‑94 (MQ=60)

                                         TTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTG                                                      <  SRR4302540.2365285/94‑1 (MQ=60)

                                           CATGCCGTTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCA                                                    <  SRR4302540.6250022/94‑1 (MQ=60)

                                           CATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCA                                                    >  SRR4302540.8942968/1‑94 (MQ=60)

                                           CATGCCGGT‑CTCGACTGGACCTGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCCGATCGACTTTGCCGCAT                                                   >  SRR4302540.8942967/1‑94 (MQ=60)

                                            ATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCAT                                                   >  SRR4302540.4222720/1‑94 (MQ=60)

                                            ATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCAT                                                   >  SRR4302540.7870520/1‑94 (MQ=60)

                                             TGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATT                                                  >  SRR4302540.5292330/1‑94 (MQ=60)

                                             TGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATT                                                  >  SRR4302540.9500484/1‑94 (MQ=60)

                                                   TTCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAT                                            <  SRR4302540.6092697/94‑1 (MQ=60)

                                                   TGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAT                                            <  SRR4302540.6892450/94‑1 (MQ=60)

                                                   TGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAT                                            <  SRR4302540.8188898/94‑1 (MQ=60)

                                                   TGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAT                                            <  SRR4302540.6886385/94‑1 (MQ=60)

                                                   TGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAT                                            >  SRR4302540.4571134/1‑94 (MQ=60)

                                                    GCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATG                                           >  SRR4302540.7513718/1‑94 (MQ=60)

                                                      TCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTTCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCA                                         <  SRR4302540.7725779/94‑1 (MQ=60)

                                                      TCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCTACCATATCGCATTCGCTGCATTCGAAACGCA                                         >  SRR4302540.4974706/1‑94 (MQ=60)

                                                      TCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCA                                         >  SRR4302540.1893025/1‑94 (MQ=60)

                                                      TCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCA                                         <  SRR4302540.1545152/94‑1 (MQ=60)

                                                       CGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCAT                                        <  SRR4302540.4416022/94‑1 (MQ=60)

                                                       CGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCAT                                        <  SRR4302540.3481091/94‑1 (MQ=60)

                                                       CGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCAT                                        >  SRR4302540.1931717/1‑94 (MQ=60)

                                                       CGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCAT                                        <  SRR4302540.7698858/94‑1 (MQ=60)

                                                       CGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCAT                                        <  SRR4302540.1757759/94‑1 (MQ=60)

                                                        GACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCTACCAGATCGAATTCGCTGCATTCGAACTGCATA                                       >  SRR4302540.9830037/1‑94 (MQ=60)

                                                        GACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATA                                       >  SRR4302540.9830036/1‑94 (MQ=60)

                                                        GACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATA                                       <  SRR4302540.9528663/94‑1 (MQ=60)

                                                        GACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATA                                       <  SRR4302540.7720378/94‑1 (MQ=60)

                                                         ACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATAT                                      <  SRR4302540.687326/94‑1 (MQ=60)

                                                         ACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATAT                                      <  SRR4302540.8854507/94‑1 (MQ=60)

                                                          CTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATC                                     >  SRR4302540.4637616/1‑94 (MQ=60)

                                                           TGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCC                                    >  SRR4302540.5854930/1‑94 (MQ=60)

                                                           TGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCC                                    >  SRR4302540.22491/1‑94 (MQ=60)

                                                            GGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCT                                   >  SRR4302540.4522163/1‑94 (MQ=60)

                                                            GGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCT                                   <  SRR4302540.4677704/94‑1 (MQ=60)

                                                            GGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCT                                   <  SRR4302540.3267563/94‑1 (MQ=60)

                                                             GACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTG                                  <  SRR4302540.3769020/94‑1 (MQ=60)

                                                             GACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTG                                  <  SRR4302540.2726085/94‑1 (MQ=60)

                                                             GACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTG                                  <  SRR4302540.4694739/94‑1 (MQ=60)

                                                             GACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTG                                  >  SRR4302540.492494/1‑94 (MQ=60)

                                                              ACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGA                                 >  SRR4302540.4742076/1‑94 (MQ=60)

                                                               CCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAA                                <  SRR4302540.8984134/94‑1 (MQ=60)

                                                               CCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAA                                <  SRR4302540.7558925/94‑1 (MQ=60)

                                                                CCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAA                               >  SRR4302540.3237604/1‑94 (MQ=60)

                                                                 CGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAC                              <  SRR4302540.2365116/94‑1 (MQ=60)

                                                                 CGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAC                              <  SRR4302540.1626738/94‑1 (MQ=60)

                                                                 CGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAC                              <  SRR4302540.7243663/94‑1 (MQ=60)

                                                                  GTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACG                             >  SRR4302540.8439927/1‑94 (MQ=60)

                                                                  GTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACG                             >  SRR4302540.3976032/1‑94 (MQ=60)

                                                                    ACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGACACGCC                           >  SRR4302540.1055138/1‑94 (MQ=60)

                                                                    ACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCC                           >  SRR4302540.4390798/1‑94 (MQ=60)

                                                                    ACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCC                           >  SRR4302540.4158424/1‑94 (MQ=60)

                                                                    ACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCC                           <  SRR4302540.4449290/94‑1 (MQ=60)

                                                                     CTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCC                          >  SRR4302540.3395145/1‑94 (MQ=60)

                                                                     CTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCC                          <  SRR4302540.4123457/94‑1 (MQ=60)

                                                                     CTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCC                          >  SRR4302540.1652882/1‑94 (MQ=60)

                                                                     CTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCC                          >  SRR4302540.4672325/1‑94 (MQ=60)

                                                                      TGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCA                         >  SRR4302540.9789588/1‑94 (MQ=60)

                                                                      TGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCA                         <  SRR4302540.3388736/94‑1 (MQ=60)

                                                                      TGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCA                         <  SRR4302540.7243779/94‑1 (MQ=60)

                                                                      TGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCA                         <  SRR4302540.6119195/94‑1 (MQ=60)

                                                                       GACGTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAG                        <  SRR4302540.3742640/94‑1 (MQ=60)

                                                                       GACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAG                        <  SRR4302540.8527338/94‑1 (MQ=60)

                                                                         CCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGC                      <  SRR4302540.4639135/94‑1 (MQ=60)

                                                                         CCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGC                      <  SRR4302540.6767327/94‑1 (MQ=60)

                                                                         CCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGC                      <  SRR4302540.2209421/94‑1 (MQ=60)

                                                                         CCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGC                      >  SRR4302540.4366382/1‑94 (MQ=60)

                                                                          CTCGCATCCGTGCTGCCAGGCGGCTCCAGAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGACACGCCCAGGCG                     <  SRR4302540.9056150/94‑1 (MQ=60)

                                                                          CTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCG                     >  SRR4302540.3106042/1‑94 (MQ=60)

                                                                          CTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCG                     >  SRR4302540.1267158/1‑94 (MQ=60)

                                                                          CTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCG                     >  SRR4302540.857688/1‑94 (MQ=60)

                                                                          CTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCG                     >  SRR4302540.838556/1‑94 (MQ=60)

                                                                            CGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCG                   >  SRR4302540.6544477/1‑94 (MQ=60)

                                                                            CGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCG                   <  SRR4302540.8590527/94‑1 (MQ=60)

                                                                            CGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCG                   <  SRR4302540.8126850/94‑1 (MQ=60)

                                                                             GAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGG                  <  SRR4302540.1065478/94‑1 (MQ=60)

                                                                             GAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGG                  >  SRR4302540.5075167/1‑94 (MQ=60)

                                                                             GAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGG                  >  SRR4302540.8049619/1‑94 (MQ=60)

                                                                               ATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAG                >  SRR4302540.7077171/1‑94 (MQ=60)

                                                                               ATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAA                >  SRR4302540.380111/1‑94 (MQ=60)

                                                                               ATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAA                <  SRR4302540.4469303/94‑1 (MQ=60)

                                                                               AGACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCTGCCAGGTCGAATTCGCTGCATTCTAAATGCATATCCTGAAACGCCCAGGCGCGGAA                <  SRR4302540.2327279/94‑1 (MQ=60)

                                                                                 ACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGC              <  SRR4302540.1172706/94‑1 (MQ=60)

                                                                                 ACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGC              <  SRR4302540.6774220/94‑1 (MQ=60)

                                                                                 ACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGC              <  SRR4302540.7696659/94‑1 (MQ=60)

                                                                                   GTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGG            >  SRR4302540.7516533/1‑94 (MQ=60)

                                                                                   GTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGG            <  SRR4302540.5403538/94‑1 (MQ=60)

                                                                                    TGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGA           <  SRR4302540.5246612/94‑1 (MQ=60)

                                                                                     GCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAT          >  SRR4302540.5870313/1‑94 (MQ=60)

                                                                                     GCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAT          >  SRR4302540.9350707/1‑94 (MQ=60)

                                                                                     GCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAT          <  SRR4302540.5522333/94‑1 (MQ=60)

                                                                                     GCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAGTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAT          <  SRR4302540.5522334/94‑1 (MQ=60)

                                                                                      CTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATT         <  SRR4302540.1295906/94‑1 (MQ=60)

                                                                                      CTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATT         <  SRR4302540.8011168/94‑1 (MQ=60)

                                                                                       TGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTA        >  SRR4302540.8159196/1‑94 (MQ=60)

                                                                                        GCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTAC       <  SRR4302540.6633706/94‑1 (MQ=60)

                                                                                         CCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACA      <  SRR4302540.8653053/94‑1 (MQ=60)

                                                                                          CAGGCTGCTCCAAAGCTCTGCGCTTCGGCCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACAC     <  SRR4302540.2581501/94‑1 (MQ=60)

                                                                                          CAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACAC     >  SRR4302540.3769031/1‑94 (MQ=60)

                                                                                          CAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACAC     >  SRR4302540.663983/1‑94 (MQ=60)

                                                                                          CAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACAC     >  SRR4302540.7960697/1‑94 (MQ=60)

                                                                                           AGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACC    >  SRR4302540.8973822/1‑94 (MQ=60)

                                                                                            GGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCG   >  SRR4302540.6745798/1‑94 (MQ=60)

                                                                                            GGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCG   >  SRR4302540.2831266/1‑94 (MQ=60)

                                                                                             GCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGA  >  SRR4302540.224485/1‑94 (MQ=60)

GCAACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGA  >  NC_000913/4549473‑4549659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`