Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,549,566 |
A→G |
D121G (GAC→GGC) |
uxuA → |
mannonate hydrolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,549,566 | 0 | A | G | 100.0%
| 686.7
/ NA
| 214 | D121G (GAC→GGC) | uxuA | mannonate hydrolase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (100/114); total (100/114) |
Only 100 of 223 total aligned reads displayed.
ACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACA > NC_000913/4549476‑4549655
|
aCCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCg < 2:1121328/93‑1 (MQ=255)
cTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAggcggc > 1:3617181/1‑93 (MQ=255)
ggCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTc > 2:1970409/1‑93 (MQ=255)
gcgcAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTcc < 2:5440782/93‑1 (MQ=255)
gcgcAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTcc < 2:1911401/93‑1 (MQ=255)
cAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCaaa < 1:1227025/93‑1 (MQ=255)
gtgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGctc < 1:177599/93‑1 (MQ=255)
gtgCCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGctc < 2:6097986/93‑1 (MQ=255)
tgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGctct > 2:3111134/1‑93 (MQ=255)
tgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGctct > 1:4647288/1‑93 (MQ=255)
tgGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGctct < 2:3810044/93‑1 (MQ=255)
ggCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTg < 1:4471849/93‑1 (MQ=255)
gCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTgc < 1:919123/93‑1 (MQ=255)
cATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTgcg < 1:2000892/93‑1 (MQ=255)
cATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTgcg < 1:4362869/93‑1 (MQ=255)
aTTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCCgcgc > 2:3389887/1‑93 (MQ=255)
ttCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCt > 2:2741460/1‑93 (MQ=255)
tCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCtt < 1:1428969/93‑1 (MQ=255)
tCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCtt > 2:5460272/1‑93 (MQ=255)
aCCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGAc > 2:3896688/1‑93 (MQ=255)
aCCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGAc < 1:5666422/93‑1 (MQ=255)
ccGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGAcc < 1:4930340/93‑1 (MQ=255)
cGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCa > 1:4283459/1‑93 (MQ=255)
gtgtGCTACACCTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAg < 2:4642775/93‑1 (MQ=255)
tgtgCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGa < 2:1308145/93‑1 (MQ=255)
gtgCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGAt < 1:3547628/93‑1 (MQ=255)
tgCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATc < 1:5233979/93‑1 (MQ=255)
tACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGaa < 1:5156283/93‑1 (MQ=255)
tACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGaa > 2:1849280/1‑93 (MQ=255)
tACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGaa < 1:6237923/93‑1 (MQ=255)
tACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGaa < 1:3103411/93‑1 (MQ=255)
tACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGaa > 2:1085023/1‑93 (MQ=255)
tACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGaa > 2:933479/1‑93 (MQ=255)
aCAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAt > 2:5096738/1‑93 (MQ=255)
aCAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAt > 2:4178850/1‑93 (MQ=255)
cAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAtt < 2:4453355/93‑1 (MQ=255)
cAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAtt < 1:2130399/93‑1 (MQ=255)
cAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAtt < 2:592348/93‑1 (MQ=255)
cAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAtt < 1:3229075/93‑1 (MQ=255)
aCTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCg > 1:2169395/1‑93 (MQ=255)
cTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGc < 1:2445294/93‑1 (MQ=255)
ttCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCt > 1:1625127/1‑93 (MQ=255)
tCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTg > 2:893515/1‑93 (MQ=255)
cATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGc < 1:6264236/93‑1 (MQ=255)
tGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCAt > 2:5643508/1‑93 (MQ=255)
gCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGGTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCAtt > 2:5134900/1‑93 (MQ=255)
gCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCAtt > 2:1609953/1‑93 (MQ=255)
gCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCAtt < 1:1893276/93‑1 (MQ=255)
ccGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTc > 1:721654/1‑93 (MQ=255)
ccGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTc < 2:2833646/93‑1 (MQ=255)
ccGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTc < 2:4778656/93‑1 (MQ=255)
ggTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGa > 1:1469084/1‑93 (MQ=255)
gTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGaa > 1:2749735/1‑93 (MQ=255)
tGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGaaa < 1:5437369/93‑1 (MQ=255)
gCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAt < 1:4252955/93‑1 (MQ=255)
cTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATg < 2:3701350/93‑1 (MQ=255)
cTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATg < 2:438279/93‑1 (MQ=255)
cGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCa < 1:5558983/93‑1 (MQ=255)
aCTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCata < 1:4781586/93‑1 (MQ=255)
aCTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCata > 2:1801251/1‑93 (MQ=255)
tGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATc < 1:4944404/93‑1 (MQ=255)
ggACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATcc < 2:1167831/93‑1 (MQ=255)
gACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCt < 2:2461851/93‑1 (MQ=255)
aCCCGTACTGACCTCGAATACGCGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATAGAATTCGCTGCATTCGAAATGCATATCCTg > 2:3691634/1‑93 (MQ=255)
cccGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGa > 1:4109090/1‑93 (MQ=255)
cGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGaaa > 2:4241239/1‑93 (MQ=255)
cGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGaaa < 1:972884/93‑1 (MQ=255)
cGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGaaa < 1:531185/93‑1 (MQ=255)
gTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAc < 2:790869/93‑1 (MQ=255)
gTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAc < 2:4327040/93‑1 (MQ=255)
gTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAc > 1:656357/1‑93 (MQ=255)
gTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAc < 1:1756609/93‑1 (MQ=255)
gTACTGACCTCGAATACGGGCTGCCAGGCGGCTTCAAAGCTTTGCGCTTCGACCAGATCGAATTCGGTGCATTCGAAATGCATATCCTGAAAc > 2:560606/1‑93 (MQ=255)
tACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACg > 2:2205131/1‑93 (MQ=255)
aCTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGCAACGc > 2:971035/1‑93 (MQ=255)
aCTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGc > 1:4713403/1‑93 (MQ=255)
cTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGcc < 1:5373051/93‑1 (MQ=255)
tGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGccc > 2:1469824/1‑93 (MQ=255)
tGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGccc < 2:1186707/93‑1 (MQ=255)
tGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGccc < 1:5958517/93‑1 (MQ=255)
gACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCa < 1:3358209/93‑1 (MQ=255)
gACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCa < 1:5812887/93‑1 (MQ=255)
gACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGAATATCCTGAAACCCCCa > 1:2041367/1‑93 (MQ=255)
aCCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAg > 2:687536/1‑93 (MQ=255)
aCCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAg < 1:2792979/93‑1 (MQ=255)
aCCTCGAAGACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAg > 2:6146420/1‑93 (MQ=255)
ccTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAgg > 2:2380023/1‑93 (MQ=255)
ccTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAgg > 2:469784/1‑93 (MQ=255)
cTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATTGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgc < 1:4438253/93‑1 (MQ=255)
cTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgc < 2:4744590/93‑1 (MQ=255)
cTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgc > 1:2186688/1‑93 (MQ=255)
cGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGgcgc > 1:1754154/1‑93 (MQ=255)
gAATACGTGCTGCCAGGCGACTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGcgcg < 1:1338000/93‑1 (MQ=255)
aaTACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCgg < 2:4952336/93‑1 (MQ=255)
tACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGaa > 2:4980049/1‑93 (MQ=255)
aCGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAg > 1:2632320/1‑93 (MQ=255)
tgctgcCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCgg < 2:1658982/93‑1 (MQ=255)
tgctgcCAGGCGGCTCCAAAGCTCTGCACTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCgg < 1:3072880/93‑1 (MQ=255)
ccAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTac < 2:2655859/93‑1 (MQ=255)
cAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTaca < 2:5786633/93‑1 (MQ=255)
|
ACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACA > NC_000913/4549476‑4549655
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCAACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGA > NC_000913/4549473‑4549659
|
GCAACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGC > SRR4302533.4493634/1‑94 (MQ=60)
AACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCG < SRR4302533.3000770/94‑1 (MQ=60)
AACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCG < SRR4302533.5511970/94‑1 (MQ=60)
CCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGC > SRR4302533.3639433/1‑94 (MQ=60)
CCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGC > SRR4302533.5290683/1‑94 (MQ=60)
CTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCT < SRR4302533.5378405/94‑1 (MQ=60)
TGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTC < SRR4302533.892237/94‑1 (MQ=60)
GCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCA < SRR4302533.1543593/94‑1 (MQ=60)
CGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAA > SRR4302533.197221/1‑94 (MQ=60)
CAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAG < SRR4302533.2890778/94‑1 (MQ=60)
CAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAG > SRR4302533.6275900/1‑94 (MQ=60)
CAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAG < SRR4302533.146518/94‑1 (MQ=60)
CAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAG < SRR4302533.1234373/94‑1 (MQ=60)
AGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGC > SRR4302533.2044107/1‑94 (MQ=60)
AGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGC > SRR4302533.4421817/1‑94 (MQ=60)
AGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAAC > SRR4302533.1412946/1‑94 (MQ=60)
GTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCT > SRR4302533.2398146/1‑94 (MQ=60)
GTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCT < SRR4302533.5904210/94‑1 (MQ=60)
GTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCT > SRR4302533.4675448/1‑94 (MQ=60)
GTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCT < SRR4302533.178710/94‑1 (MQ=60)
GGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGC < SRR4302533.4498897/94‑1 (MQ=60)
GGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGC < SRR4302533.166712/94‑1 (MQ=60)
GCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCG < SRR4302533.924522/94‑1 (MQ=60)
CATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGC < SRR4302533.2013210/94‑1 (MQ=60)
CATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGC < SRR4302533.4389206/94‑1 (MQ=60)
CATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGC < SRR4302533.2013211/94‑1 (MQ=60)
CATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGC > SRR4302533.1733362/1‑94 (MQ=60)
ATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCT > SRR4302533.2362994/1‑94 (MQ=60)
TCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTC < SRR4302533.2070286/94‑1 (MQ=60)
TCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTC < SRR4302533.1437609/94‑1 (MQ=60)
CGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCACAGCTCTGCGCTTCG > SRR4302533.2792113/1‑94 (MQ=60)
GCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGA > SRR4302533.1808558/1‑94 (MQ=60)
ACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACC > SRR4302533.3821040/1‑94 (MQ=60)
ACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACC < SRR4302533.5700653/94‑1 (MQ=60)
CCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCA > SRR4302533.4309201/1‑94 (MQ=60)
CCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCA < SRR4302533.4960197/94‑1 (MQ=60)
GTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGA > SRR4302533.5171293/1‑94 (MQ=60)
GTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATC < SRR4302533.3569493/94‑1 (MQ=60)
TGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCG > SRR4302533.4863997/1‑94 (MQ=60)
TGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCG < SRR4302533.5265455/94‑1 (MQ=60)
GCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGA > SRR4302533.2162706/1‑94 (MQ=60)
TACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAT < SRR4302533.6275275/94‑1 (MQ=60)
TACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAT < SRR4302533.3122492/94‑1 (MQ=60)
TACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAT < SRR4302533.5187417/94‑1 (MQ=60)
TACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAT < SRR4302533.1766669/94‑1 (MQ=60)
TACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAT < SRR4302533.5537896/94‑1 (MQ=60)
TACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAT < SRR4302533.6320754/94‑1 (MQ=60)
CAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTC < SRR4302533.3248984/94‑1 (MQ=60)
CAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTC < SRR4302533.2143534/94‑1 (MQ=60)
AACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCG > SRR4302533.2182739/1‑94 (MQ=60)
CTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCT > SRR4302533.1634971/1‑94 (MQ=60)
CTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCT < SRR4302533.2460388/94‑1 (MQ=60)
CTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCT < SRR4302533.769948/94‑1 (MQ=60)
TTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGAGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTG > SRR4302533.2669687/1‑94 (MQ=60)
CATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCA < SRR4302533.6301677/94‑1 (MQ=60)
ATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCAT > SRR4302533.4701236/1‑94 (MQ=60)
TGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATT < SRR4302533.4293768/94‑1 (MQ=60)
GCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTC < SRR4302533.725332/94‑1 (MQ=60)
GCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTC > SRR4302533.725913/1‑94 (MQ=60)
GCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTC < SRR4302533.1904836/94‑1 (MQ=60)
CGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGA > SRR4302533.3596374/1‑94 (MQ=60)
CGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGA > SRR4302533.1477941/1‑94 (MQ=60)
GGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAA < SRR4302533.6124812/94‑1 (MQ=60)
GGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAA > SRR4302533.2766593/1‑94 (MQ=60)
TGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAAT < SRR4302533.5470116/94‑1 (MQ=60)
GCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATG < SRR4302533.4278607/94‑1 (MQ=60)
CTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGC > SRR4302533.4972431/1‑94 (MQ=60)
CGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCAT < SRR4302533.5592581/94‑1 (MQ=60)
CGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCAT > SRR4302533.3451636/1‑94 (MQ=60)
CGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCAT < SRR4302533.5022585/94‑1 (MQ=60)
GACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATA < SRR4302533.4388494/94‑1 (MQ=60)
GACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATA > SRR4302533.4676673/1‑94 (MQ=60)
ACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATAT < SRR4302533.5578459/94‑1 (MQ=60)
ACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATAT < SRR4302533.4810556/94‑1 (MQ=60)
CTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATC < SRR4302533.5780176/94‑1 (MQ=60)
CTGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATC > SRR4302533.3124349/1‑94 (MQ=60)
TGGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCC < SRR4302533.4974332/94‑1 (MQ=60)
GGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCT < SRR4302533.3347732/94‑1 (MQ=60)
GGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCT < SRR4302533.1311114/94‑1 (MQ=60)
GGACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCT > SRR4302533.4743652/1‑94 (MQ=60)
ACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGA > SRR4302533.5202790/1‑94 (MQ=60)
ACCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGA > SRR4302533.4134072/1‑94 (MQ=60)
CCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAA > SRR4302533.5417303/1‑94 (MQ=60)
CCCGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAA < SRR4302533.3110976/94‑1 (MQ=60)
CGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAC < SRR4302533.534343/94‑1 (MQ=60)
CGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAC > SRR4302533.660230/1‑94 (MQ=60)
CGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAC < SRR4302533.976556/94‑1 (MQ=60)
CGTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAAC < SRR4302533.978596/94‑1 (MQ=60)
GTACTGACCTCGAATACGTGCTGCCCGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACG > SRR4302533.44984/1‑94 (MQ=60)
GTACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACG < SRR4302533.1767312/94‑1 (MQ=60)
TACTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGC > SRR4302533.4741968/1‑94 (MQ=60)
CTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCC < SRR4302533.5405333/94‑1 (MQ=60)
CTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCC < SRR4302533.2196614/94‑1 (MQ=60)
CTGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCC > SRR4302533.5650940/1‑94 (MQ=60)
TGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCA < SRR4302533.5994558/94‑1 (MQ=60)
TGACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGAATATCCTGAAACCCCCA > SRR4302533.2053948/1‑94 (MQ=60)
GACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAG < SRR4302533.3378961/94‑1 (MQ=60)
GACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAG < SRR4302533.5847995/94‑1 (MQ=60)
ACCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGG < SRR4302533.2810159/94‑1 (MQ=60)
CCTCGAATACGTGCTGCGAGGCGGCTCAAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGC < SRR4302533.4584525/94‑1 (MQ=60)
CCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGC < SRR4302533.3466410/94‑1 (MQ=60)
CCTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGC > SRR4302533.2200163/1‑94 (MQ=60)
CTCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATTGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCG < SRR4302533.4465082/94‑1 (MQ=60)
TCGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGC > SRR4302533.1764838/1‑94 (MQ=60)
CGAATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCG < SRR4302533.6139741/94‑1 (MQ=60)
GAATACGTGCTGCCAGGCGACTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGG < SRR4302533.1346051/94‑1 (MQ=60)
AATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGA < SRR4302533.4326891/94‑1 (MQ=60)
ATACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAA < SRR4302533.258083/94‑1 (MQ=60)
TACGTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAG > SRR4302533.2648500/1‑94 (MQ=60)
GTGCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGG > SRR4302533.176847/1‑94 (MQ=60)
TGCTGCCAGGCGGCTCCAAAGCTCTGCACTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGA < SRR4302533.3091743/94‑1 (MQ=60)
GCTGCCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGAT > SRR4302533.418947/1‑94 (MQ=60)
CCAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACA > SRR4302533.2942528/1‑94 (MQ=60)
CAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACAC > SRR4302533.4054041/1‑94 (MQ=60)
CAGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACAC > SRR4302533.4156584/1‑94 (MQ=60)
AGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACC > SRR4302533.6014167/1‑94 (MQ=60)
AGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACC < SRR4302533.4747701/94‑1 (MQ=60)
AGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACC < SRR4302533.3895299/94‑1 (MQ=60)
AGGCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAAGTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACC < SRR4302533.194662/94‑1 (MQ=60)
GCGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGA < SRR4302533.2349151/94‑1 (MQ=60)
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GCAACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGA > NC_000913/4549473‑4549659
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
