Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,600,078	C→T	W135* (TGG→TAG)	yjjP ←	putative structural protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,600,078	0	C	T	100.0%	1730.4 / NA	462	W135* (TGG→TAG)	yjjP	putative structural protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (267/195); total (267/195)

Only 100 of 469 total aligned reads displayed.

GCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCCATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATG  >  NC_000913/4599988‑4600167

gCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTAt                                                                                         <  1:8436819/93‑1 (MQ=255)

 cAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATc                                                                                        <  1:37428/93‑1 (MQ=255)

  aaaGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCt                                                                                       >  2:304873/1‑93 (MQ=255)

   aagaagGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCtt                                                                                      >  2:2952736/1‑93 (MQ=255)

     gaagGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTgg                                                                                    >  2:6712146/1‑93 (MQ=255)

      aagGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTggg                                                                                   >  1:4333320/1‑93 (MQ=255)

        ggTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTa                                                                                 <  2:4721966/93‑1 (MQ=255)

         gTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTaa                                                                                <  1:8926009/93‑1 (MQ=255)

          tgatgaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAAc                                                                               <  2:5020379/93‑1 (MQ=255)

          tgatgaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAAc                                                                               >  1:755447/1‑93 (MQ=255)

           gatgaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACg                                                                              >  1:1397440/1‑93 (MQ=255)

           gatgaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACg                                                                              >  2:7066417/1‑93 (MQ=255)

            atgaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGt                                                                             >  2:945420/1‑93 (MQ=255)

            atgaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGt                                                                             >  2:6518353/1‑93 (MQ=255)

             tgaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTa                                                                            >  1:7961030/1‑93 (MQ=255)

              gaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTaa                                                                           <  2:1380719/93‑1 (MQ=255)

              gaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTaa                                                                           <  2:344807/93‑1 (MQ=255)

              gaCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTaa                                                                           <  2:7592783/93‑1 (MQ=255)

                   cACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCt                                                                      <  1:9614122/93‑1 (MQ=255)

                      cATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGaa                                                                   <  1:2053756/93‑1 (MQ=255)

                       aTCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAt                                                                  >  1:4153283/1‑93 (MQ=255)

                       aTCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAt                                                                  >  1:6430799/1‑93 (MQ=255)

                       aTCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAt                                                                  >  2:8484609/1‑93 (MQ=255)

                        tCCCAGCCGCCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAtt                                                                 >  1:516794/1‑93 (MQ=255)

                        tCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAtt                                                                 >  2:4827676/1‑93 (MQ=255)

                        tCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAtt                                                                 >  2:6990032/1‑93 (MQ=255)

                           cAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTgg                                                              >  2:7731211/1‑93 (MQ=255)

                           cAGCCACCGTTATTGAG‑TTACCGAAACAGGCGCAAGAAAGGCCAACCATTAAAGCTACCAGCTATCCTGGGTAACGTAATGGCTGAATTTGGc                                                             >  1:4693784/1‑93 (MQ=255)

                             gCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCt                                                            >  2:4455817/1‑93 (MQ=255)

                               cACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTaa                                                          >  1:3400900/1‑93 (MQ=255)

                               cACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTaa                                                          >  2:8939599/1‑93 (MQ=255)

                                aCCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTaaa                                                         >  2:5186531/1‑93 (MQ=255)

                                aCCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTaaa                                                         >  1:8075678/1‑93 (MQ=255)

                                 ccGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAt                                                        <  2:3661345/93‑1 (MQ=255)

                                 ccGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAt                                                        >  2:9630385/1‑93 (MQ=255)

                                  cGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATc                                                       >  2:9236034/1‑93 (MQ=255)

                                   gTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCg                                                      >  1:6214209/1‑93 (MQ=255)

                                    ttATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGt                                                     <  1:6071119/93‑1 (MQ=255)

                                    ttATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGt                                                     >  2:5947444/1‑93 (MQ=255)

                                    ttATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGt                                                     >  2:1542930/1‑93 (MQ=255)

                                    ttATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGt                                                     <  2:6387859/93‑1 (MQ=255)

                                     tATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGtt                                                    >  2:10042246/1‑93 (MQ=255)

                                      aTTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGttt                                                   >  1:2389759/1‑93 (MQ=255)

                                      aTTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGttt                                                   <  2:5284713/93‑1 (MQ=255)

                                       ttGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTtc                                                  <  1:7765313/93‑1 (MQ=255)

                                        tGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTtct                                                 >  2:2632877/1‑93 (MQ=255)

                                        tGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTtct                                                 >  1:10032553/1‑93 (MQ=255)

                                         gAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTtctc                                                <  1:4035691/93‑1 (MQ=255)

                                          aGTTTACAGAAACAGGCGCAAGAAAGGCCAACCTTTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTctct                                               <  1:9686521/93‑1 (MQ=255)

                                           gTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTa                                              <  1:8242304/93‑1 (MQ=255)

                                            tttACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAc                                             >  1:2246907/1‑93 (MQ=255)

                                            tttACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAc                                             >  1:1320754/1‑93 (MQ=255)

                                             ttACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACg                                            <  2:391463/93‑1 (MQ=255)

                                              tACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGc                                           >  2:8634758/1‑93 (MQ=255)

                                               aCAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGcc                                          >  2:6087460/1‑93 (MQ=255)

                                                cAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCt                                         >  2:7783163/1‑93 (MQ=255)

                                                  gAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCttt                                       <  1:903799/93‑1 (MQ=255)

                                                  gAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCttt                                       >  1:9247758/1‑93 (MQ=255)

                                                  gAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCttt                                       >  1:3077811/1‑93 (MQ=255)

                                                   aaaCAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTg                                      >  1:2844347/1‑93 (MQ=255)

                                                    aaCAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGt                                     <  1:7657108/93‑1 (MQ=255)

                                                    aaCAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGt                                     <  2:1753818/93‑1 (MQ=255)

                                                        ggCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATc                                 <  1:3789089/93‑1 (MQ=255)

                                                        ggCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATc                                 >  2:5432112/1‑93 (MQ=255)

                                                         gcgcAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATcc                                <  1:112055/93‑1 (MQ=255)

                                                          cgcAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCca                               <  1:1953262/93‑1 (MQ=255)

                                                            cAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcagc                             <  2:4313191/93‑1 (MQ=255)

                                                             aaGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcagca                            <  1:8866943/93‑1 (MQ=255)

                                                             aaGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcagca                            <  2:8233889/93‑1 (MQ=255)

                                                             aaGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcagca                            >  1:5540750/1‑93 (MQ=255)

                                                              aGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCcagcag                           >  1:4399183/1‑93 (MQ=255)

                                                                 aaGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAgatg                        >  1:846998/1‑93 (MQ=255)

                                                                   ggCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAgatgat                      >  2:2264934/1‑93 (MQ=255)

                                                                    gCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGatgatg                     >  2:2146713/1‑93 (MQ=255)

                                                                      cAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCt                   >  1:3532591/1‑93 (MQ=255)

                                                                       aaCCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTc                  >  1:6793512/1‑93 (MQ=255)

                                                                       aaCCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTc                  >  1:2671688/1‑93 (MQ=255)

                                                                       aaCCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTc                  <  2:7304263/93‑1 (MQ=255)

                                                                        aCCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTcc                 >  2:3171797/1‑93 (MQ=255)

                                                                           aTTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCa              >  2:6905576/1‑93 (MQ=255)

                                                                            ttAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCaa             >  1:9905642/1‑93 (MQ=255)

                                                                            ttAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCaa             >  1:5281494/1‑93 (MQ=255)

                                                                            ttAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCaa             <  2:3297315/93‑1 (MQ=255)

                                                                             tAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAg            >  1:7003535/1‑93 (MQ=255)

                                                                               aGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGaa          <  1:1557286/93‑1 (MQ=255)

                                                                               aGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGaa          >  2:2847424/1‑93 (MQ=255)

                                                                                ggCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAAt         >  2:5371765/1‑93 (MQ=255)

                                                                                 gCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATc        >  2:5584937/1‑93 (MQ=255)

                                                                                 gCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATc        >  2:3755391/1‑93 (MQ=255)

                                                                                  cTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATca       >  1:4938491/1‑93 (MQ=255)

                                                                                  cTACCAGCTACCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATca       <  1:1687837/93‑1 (MQ=255)

                                                                                    aCCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATcaca     >  1:7497790/1‑93 (MQ=255)

                                                                                    aCCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATcaca     >  2:251334/1‑93 (MQ=255)

                                                                                     ccAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACaa    <  1:4855992/93‑1 (MQ=255)

                                                                                     ccAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACaa    >  1:4486145/1‑93 (MQ=255)

                                                                                     ccAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACaa    <  2:1902299/93‑1 (MQ=255)

                                                                                     ccAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACaa    <  2:4049491/93‑1 (MQ=255)

                                                                                      cAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAt   <  1:7154975/93‑1 (MQ=255)

                                                                                       aGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCTGCAAGAATCACAAtg  >  1:8699439/1‑93 (MQ=255)

                                                                                       aGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAtg  >  2:5729840/1‑93 (MQ=255)

GCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCCATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATG  >  NC_000913/4599988‑4600167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 257 total aligned reads displayed.

CTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCCATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCT  >  NC_000913/4599985‑4600171

CTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCT                                                                                               >  SRR4302540.5918246/1‑94 (MQ=60)

CTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCT                                                                                               <  SRR4302540.9449999/94‑1 (MQ=60)

 TGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTA                                                                                              >  SRR4302540.9777043/1‑94 (MQ=60)

   GCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATC                                                                                            <  SRR4302540.8534765/94‑1 (MQ=60)

   GCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATC                                                                                            <  SRR4302540.8534766/94‑1 (MQ=60)

    CAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCT                                                                                           <  SRR4302540.37815/94‑1 (MQ=60)

    CAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCT                                                                                           >  SRR4302540.10062324/1‑94 (MQ=60)

     AAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTT                                                                                          >  SRR4302540.5783211/1‑94 (MQ=60)

     AAAGAAGGTGATGACGGCACCATCCCAGCCACCGTCATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTT                                                                                          <  SRR4302540.6887457/94‑1 (MQ=60)

      AAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTG                                                                                         >  SRR4302540.2100365/1‑94 (MQ=60)

      AAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTG                                                                                         >  SRR4302540.4728829/1‑94 (MQ=60)

       AGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGG                                                                                        >  SRR4302540.8192540/1‑94 (MQ=60)

        GAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGG                                                                                       <  SRR4302540.9571947/94‑1 (MQ=60)

        GAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGG                                                                                       <  SRR4302540.8366863/94‑1 (MQ=60)

        GAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGG                                                                                       >  SRR4302540.2775514/1‑94 (MQ=60)

        GAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGG                                                                                       >  SRR4302540.4380491/1‑94 (MQ=60)

        GAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGGTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGG                                                                                       >  SRR4302540.4380490/1‑94 (MQ=60)

         AAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGT                                                                                      <  SRR4302540.532149/94‑1 (MQ=60)

           GGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAA                                                                                    <  SRR4302540.2338337/94‑1 (MQ=60)

            GTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAAC                                                                                   <  SRR4302540.9029829/94‑1 (MQ=60)

            GTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAAC                                                                                   <  SRR4302540.8621678/94‑1 (MQ=60)

            GTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAAC                                                                                   <  SRR4302540.2924252/94‑1 (MQ=60)

            GTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAAC                                                                                   <  SRR4302540.9029828/94‑1 (MQ=60)

             TGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACG                                                                                  >  SRR4302540.1599882/1‑94 (MQ=60)

             TGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACG                                                                                  >  SRR4302540.1412441/1‑94 (MQ=60)

              GATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGT                                                                                 <  SRR4302540.8995034/94‑1 (MQ=60)

              GATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGT                                                                                 <  SRR4302540.3800004/94‑1 (MQ=60)

              GATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGT                                                                                 >  SRR4302540.3786270/1‑94 (MQ=60)

               ATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTA                                                                                >  SRR4302540.1636402/1‑94 (MQ=60)

               ATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTA                                                                                >  SRR4302540.8053809/1‑94 (MQ=60)

               ATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGCAACGCA                                                                                >  SRR4302540.7559691/1‑94 (MQ=60)

                TGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAA                                                                               >  SRR4302540.4513713/1‑94 (MQ=60)

                 GACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAAT                                                                              <  SRR4302540.7195255/94‑1 (MQ=60)

                 GACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAAT                                                                              <  SRR4302540.4893485/94‑1 (MQ=60)

                 GACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAAT                                                                              <  SRR4302540.4893484/94‑1 (MQ=60)

                  ACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATG                                                                             <  SRR4302540.7706380/94‑1 (MQ=60)

                  ACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATG                                                                             >  SRR4302540.193430/1‑94 (MQ=60)

                  ACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATG                                                                             <  SRR4302540.269076/94‑1 (MQ=60)

                    GGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGT                                                                           >  SRR4302540.8806005/1‑94 (MQ=60)

                    GGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGC                                                                           >  SRR4302540.8806006/1‑94 (MQ=60)

                    GGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGC                                                                           >  SRR4302540.6540183/1‑94 (MQ=60)

                     GCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCT                                                                          >  SRR4302540.6986264/1‑94 (MQ=60)

                      CACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTG                                                                         <  SRR4302540.9727474/94‑1 (MQ=60)

                      CACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTG                                                                         >  SRR4302540.8358955/1‑94 (MQ=60)

                       ACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGA                                                                        >  SRR4302540.3482507/1‑94 (MQ=60)

                       ACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGA                                                                        >  SRR4302540.4315275/1‑94 (MQ=60)

                        CCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAA                                                                       >  SRR4302540.1346220/1‑94 (MQ=60)

                        CCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAA                                                                       >  SRR4302540.4095742/1‑94 (MQ=60)

                         CATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAT                                                                      >  SRR4302540.4916199/1‑94 (MQ=60)

                         CATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAT                                                                      >  SRR4302540.6502376/1‑94 (MQ=60)

                         CATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAT                                                                      >  SRR4302540.4198271/1‑94 (MQ=60)

                          ATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATT                                                                     <  SRR4302540.2280181/94‑1 (MQ=60)

                          ATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATT                                                                     >  SRR4302540.3624269/1‑94 (MQ=60)

                          ATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATT                                                                     >  SRR4302540.8555705/1‑94 (MQ=60)

                          ATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATT                                                                     <  SRR4302540.5303071/94‑1 (MQ=60)

                           TCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTT                                                                    >  SRR4302540.4137295/1‑94 (MQ=60)

                           TCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTT                                                                    <  SRR4302540.1350174/94‑1 (MQ=60)

                           TCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTT                                                                    <  SRR4302540.1350181/94‑1 (MQ=60)

                           TCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTT                                                                    >  SRR4302540.6309243/1‑94 (MQ=60)

                           TCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTT                                                                    <  SRR4302540.2050771/94‑1 (MQ=60)

                           TCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTT                                                                    <  SRR4302540.2705899/94‑1 (MQ=60)

                            CCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTG                                                                   >  SRR4302540.3877776/1‑94 (MQ=60)

                             CCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGG                                                                  <  SRR4302540.4087222/94‑1 (MQ=60)

                             CCAGCCACCGTTATTGAG‑TTACCGAAACAGGCGCAAGAAAGGCCAACCATTAAAGCTACCAGCTATCCTGGGTAACGTAATGGCTGAATTTGGC                                                                 >  SRR4302540.4743962/1‑94 (MQ=60)

                              CAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGA                                                                 >  SRR4302540.8143634/1‑94 (MQ=60)

                               AGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTCACGTAATGGCTGAATTTGGCT                                                                >  SRR4302540.7617988/1‑94 (MQ=60)

                               AGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCT                                                                >  SRR4302540.7617989/1‑94 (MQ=60)

                                GCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTA                                                               <  SRR4302540.3189950/94‑1 (MQ=60)

                                 CCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAA                                                              >  SRR4302540.10058408/1‑94 (MQ=60)

                                 CCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAA                                                              >  SRR4302540.3437977/1‑94 (MQ=60)

                                  CACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAA                                                             >  SRR4302540.3275484/1‑94 (MQ=60)

                                  CACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAA                                                             >  SRR4302540.8169393/1‑94 (MQ=60)

                                  CACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAA                                                             >  SRR4302540.1441615/1‑94 (MQ=60)

                                  CACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAA                                                             >  SRR4302540.2036121/1‑94 (MQ=60)

                                   ACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAT                                                            <  SRR4302540.5284094/94‑1 (MQ=60)

                                   ACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAT                                                            >  SRR4302540.8089118/1‑94 (MQ=60)

                                   ACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAT                                                            >  SRR4302540.8459171/1‑94 (MQ=60)

                                    CCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATC                                                           >  SRR4302540.5988383/1‑94 (MQ=60)

                                     CGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCG                                                          >  SRR4302540.6283354/1‑94 (MQ=60)

                                      GTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGT                                                         >  SRR4302540.2957383/1‑94 (MQ=60)

                                      GTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGT                                                         >  SRR4302540.2258410/1‑94 (MQ=60)

                                       TTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTT                                                        <  SRR4302540.5172654/94‑1 (MQ=60)

                                       TTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTT                                                        <  SRR4302540.7753426/94‑1 (MQ=60)

                                       TTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTT                                                        <  SRR4302540.6138614/94‑1 (MQ=60)

                                       TTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTT                                                        >  SRR4302540.9176877/1‑94 (MQ=60)

                                       TTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTT                                                        >  SRR4302540.6758778/1‑94 (MQ=60)

                                       TTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTT                                                        <  SRR4302540.2858392/94‑1 (MQ=60)

                                       GTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCGAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTT                                                        <  SRR4302540.7753425/94‑1 (MQ=60)

                                        TATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTT                                                       >  SRR4302540.2415516/1‑94 (MQ=60)

                                         ATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTC                                                      <  SRR4302540.1798735/94‑1 (MQ=60)

                                          TTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCT                                                     >  SRR4302540.10149251/1‑94 (MQ=60)

                                          TTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCT                                                     <  SRR4302540.7856091/94‑1 (MQ=60)

                                           TGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTC                                                    <  SRR4302540.6261262/94‑1 (MQ=60)

                                            GAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCT                                                   <  SRR4302540.6922845/94‑1 (MQ=60)

                                            GAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCT                                                   <  SRR4302540.4079208/94‑1 (MQ=60)

                                             AGTTTACAGAAACAGGCGCAAGAAAGGCCAACCTTTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTA                                                  <  SRR4302540.9800475/94‑1 (MQ=60)

                                             AGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTA                                                  >  SRR4302540.8543070/1‑94 (MQ=60)

                                             AGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTA                                                  >  SRR4302540.7772480/1‑94 (MQ=60)

                                              GTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                 <  SRR4302540.974602/94‑1 (MQ=60)

                                              GTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                 >  SRR4302540.1334514/1‑94 (MQ=60)

                                              GTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                 >  SRR4302540.8990972/1‑94 (MQ=60)

                                               TTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACG                                                <  SRR4302540.2119543/94‑1 (MQ=60)

                                                  ACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCT                                             <  SRR4302540.1222050/94‑1 (MQ=60)

                                                   CAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTT                                            <  SRR4302540.9944080/94‑1 (MQ=60)

                                                   CAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTT                                            >  SRR4302540.7260267/1‑94 (MQ=60)

                                                    AGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAGTTTGGCTAAATCGTTTCTCTACGCCTTT                                           <  SRR4302540.7724735/94‑1 (MQ=60)

                                                    AGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTT                                           >  SRR4302540.3111580/1‑94 (MQ=60)

                                                    AGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTT                                           <  SRR4302540.7590459/94‑1 (MQ=60)

                                                    AGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTT                                           >  SRR4302540.9358476/1‑94 (MQ=60)

                                                     GAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTG                                          >  SRR4302540.2875126/1‑94 (MQ=60)

                                                     GAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTG                                          <  SRR4302540.913393/94‑1 (MQ=60)

                                                     GAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTG                                          >  SRR4302540.4976267/1‑94 (MQ=60)

                                                      AAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGT                                         >  SRR4302540.8636511/1‑94 (MQ=60)

                                                       AACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTA                                        >  SRR4302540.2007360/1‑94 (MQ=60)

                                                        ACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAA                                       <  SRR4302540.9247703/94‑1 (MQ=60)

                                                        ACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAA                                       <  SRR4302540.372071/94‑1 (MQ=60)

                                                          AGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATC                                     <  SRR4302540.9391902/94‑1 (MQ=60)

                                                           GGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCC                                    <  SRR4302540.3667041/94‑1 (MQ=60)

                                                           GGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCC                                    <  SRR4302540.3830404/94‑1 (MQ=60)

                                                            GCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCA                                   <  SRR4302540.113250/94‑1 (MQ=60)

                                                             CGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAG                                  <  SRR4302540.4939958/94‑1 (MQ=60)

                                                             CGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAG                                  <  SRR4302540.7454482/94‑1 (MQ=60)

                                                             CGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAG                                  <  SRR4302540.4446015/94‑1 (MQ=60)

                                                             AGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAG                                  <  SRR4302540.5560095/94‑1 (MQ=60)

                                                              GCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGC                                 >  SRR4302540.2882719/1‑94 (MQ=60)

                                                              GCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGC                                 <  SRR4302540.7157013/94‑1 (MQ=60)

                                                              GCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGC                                 >  SRR4302540.16322/1‑94 (MQ=60)

                                                              GCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGC                                 <  SRR4302540.10000824/94‑1 (MQ=60)

                                                               CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCA                                <  SRR4302540.6208294/94‑1 (MQ=60)

                                                               CAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCA                                <  SRR4302540.9773036/94‑1 (MQ=60)

                                                                AAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAG                               >  SRR4302540.447878/1‑94 (MQ=60)

                                                                AAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAG                               >  SRR4302540.4446896/1‑94 (MQ=60)

                                                                AAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAG                               <  SRR4302540.8969548/94‑1 (MQ=60)

                                                                AAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAG                               >  SRR4302540.9080115/1‑94 (MQ=60)

                                                                 AGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGA                              >  SRR4302540.6437714/1‑94 (MQ=60)

                                                                  GAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGAT                             >  SRR4302540.1206415/1‑94 (MQ=60)

                                                                  GAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGAT                             <  SRR4302540.4567078/94‑1 (MQ=60)

                                                                  GAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGAT                             >  SRR4302540.1132614/1‑94 (MQ=60)

                                                                   AAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATG                            <  SRR4302540.7989953/94‑1 (MQ=60)

                                                                   AAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATG                            >  SRR4302540.2690296/1‑94 (MQ=60)

                                                                   AAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATG                            <  SRR4302540.7989954/94‑1 (MQ=60)

                                                                   AAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATG                            >  SRR4302540.9136555/1‑94 (MQ=60)

                                                                   AAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATG                            <  SRR4302540.3792354/94‑1 (MQ=60)

                                                                   AAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATG                            >  SRR4302540.7709065/1‑94 (MQ=60)

                                                                   AAAGGCCAACCATTAAGGCGACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATG                            <  SRR4302540.1886613/94‑1 (MQ=60)

                                                                    AAGGCTAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGA                           <  SRR4302540.8852482/94‑1 (MQ=60)

                                                                    AAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGA                           >  SRR4302540.8267330/1‑94 (MQ=60)

                                                                     AGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGAT                          >  SRR4302540.4432160/1‑94 (MQ=60)

                                                                      GGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATG                         >  SRR4302540.8575209/1‑94 (MQ=60)

                                                                       GCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGC                        >  SRR4302540.5120608/1‑94 (MQ=60)

                                                                       GCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGC                        <  SRR4302540.5222380/94‑1 (MQ=60)

                                                                        CCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCT                       >  SRR4302540.3571151/1‑94 (MQ=60)

                                                                        CCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCT                       >  SRR4302540.3509896/1‑94 (MQ=60)

                                                                         CAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTC                      >  SRR4302540.4742213/1‑94 (MQ=60)

                                                                         CAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTC                      >  SRR4302540.6868646/1‑94 (MQ=60)

                                                                         CAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTC                      >  SRR4302540.2754485/1‑94 (MQ=60)

                                                                          AACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCC                     >  SRR4302540.6164300/1‑94 (MQ=60)

                                                                          AACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCC                     >  SRR4302540.1492775/1‑94 (MQ=60)

                                                                          AACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCC                     >  SRR4302540.5513437/1‑94 (MQ=60)

                                                                          AACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCC                     >  SRR4302540.5479787/1‑94 (MQ=60)

                                                                           ACCATTAAGGCTCCCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCG                    <  SRR4302540.785981/94‑1 (MQ=60)

                                                                           ACCATTAAGGCTACCAGCTATCTTGGGTAACGTTATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCG                    <  SRR4302540.9819315/94‑1 (MQ=60)

                                                                           ACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCG                    >  SRR4302540.3877089/1‑94 (MQ=60)

                                                                            CCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGC                   >  SRR4302540.2481490/1‑94 (MQ=60)

                                                                             CATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCA                  >  SRR4302540.10163594/1‑94 (MQ=60)

                                                                             CATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCA                  >  SRR4302540.7217812/1‑94 (MQ=60)

                                                                             CATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCA                  >  SRR4302540.2883967/1‑94 (MQ=60)

                                                                             CATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCA                  >  SRR4302540.9247813/1‑94 (MQ=60)

                                                                              ATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAA                 >  SRR4302540.10021366/1‑94 (MQ=60)

                                                                              ATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAA                 >  SRR4302540.5339189/1‑94 (MQ=60)

                                                                              ATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAA                 >  SRR4302540.6848166/1‑94 (MQ=60)

                                                                               TTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAG                <  SRR4302540.8251573/94‑1 (MQ=60)

                                                                                TAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGA               >  SRR4302540.2177983/1‑94 (MQ=60)

                                                                                  AGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAAT             <  SRR4302540.1042915/94‑1 (MQ=60)

                                                                                  AGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAAT             <  SRR4302540.1574405/94‑1 (MQ=60)

                                                                                  AGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAAT             <  SRR4302540.603126/94‑1 (MQ=60)

                                                                                    GCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCA           >  SRR4302540.4991781/1‑94 (MQ=60)

                                                                                     CTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCAC          <  SRR4302540.2381256/94‑1 (MQ=60)

                                                                                     CTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCAC          >  SRR4302540.6259919/1‑94 (MQ=60)

                                                                                     CTACCAGCTACCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCAC          <  SRR4302540.1706143/94‑1 (MQ=60)

                                                                                      TACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACA         >  SRR4302540.7581561/1‑94 (MQ=60)

                                                                                      TACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACA         <  SRR4302540.6622423/94‑1 (MQ=60)

                                                                                      TACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACA         >  SRR4302540.4266997/1‑94 (MQ=60)

                                                                                       ACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAA        >  SRR4302540.4534804/1‑94 (MQ=60)

                                                                                        CCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAT       >  SRR4302540.4497588/1‑94 (MQ=60)

                                                                                        CCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAT       <  SRR4302540.4908048/94‑1 (MQ=60)

                                                                                         CAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCTGCAAGAATCACAATG      >  SRR4302540.8800425/1‑94 (MQ=60)

                                                                                         CAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATG      >  SRR4302540.3410873/1‑94 (MQ=60)

                                                                                         CAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATG      <  SRR4302540.7234719/94‑1 (MQ=60)

                                                                                          AGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGT     >  SRR4302540.3595087/1‑94 (MQ=60)

                                                                                          AGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGT     >  SRR4302540.1835491/1‑94 (MQ=60)

                                                                                           GCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTG    >  SRR4302540.7920037/1‑94 (MQ=60)

                                                                                           GCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTG    <  SRR4302540.7985278/94‑1 (MQ=60)

                                                                                           GCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTG    >  SRR4302540.103662/1‑94 (MQ=60)

                                                                                            CTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGC   >  SRR4302540.1165113/1‑94 (MQ=60)

                                                                                            CTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGC   >  SRR4302540.8780439/1‑94 (MQ=60)

                                                                                             TATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCT  >  SRR4302540.7747331/1‑94 (MQ=60)

                                                                                             TATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCT  <  SRR4302540.9362335/94‑1 (MQ=60)

                                                                                             TATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCT  >  SRR4302540.395718/1‑94 (MQ=60)

                                                                                             TATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCT  <  SRR4302540.8207319/94‑1 (MQ=60)

CTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCCATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCT  >  NC_000913/4599985‑4600171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`