Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,484,151 |
T→C |
V132A (GTG→GCG) |
crp → |
cyclic AMP receptor protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,484,151 | 0 | T | C | 100.0%
| 872.2
/ NA
| 267 | V132A (GTG→GCG) | crp | cyclic AMP receptor protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (129/138); total (129/138) |
Only 100 of 276 total aligned reads displayed.
AAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGG > NC_000913/3484059‑3484240
|
aaaaTTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGt < 2:6051269/93‑1 (MQ=255)
aTTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCggg < 1:5073280/93‑1 (MQ=255)
tttCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGc > 2:5555513/1‑93 (MQ=255)
ttCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCa < 2:3304448/93‑1 (MQ=255)
gCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAAcc > 1:3765804/1‑93 (MQ=255)
gCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAAcc < 2:3661590/93‑1 (MQ=255)
gCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAAcc < 1:3267505/93‑1 (MQ=255)
ccAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCt < 2:2966675/93‑1 (MQ=255)
cAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTg > 1:818051/1‑93 (MQ=255)
cAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTg < 2:4427433/93‑1 (MQ=255)
aaTTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTgg > 1:5008370/1‑93 (MQ=255)
aaTTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTgg < 1:3537518/93‑1 (MQ=255)
aTTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGc < 1:2604116/93‑1 (MQ=255)
aTTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGc > 1:2695879/1‑93 (MQ=255)
aTTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGc > 2:5372791/1‑93 (MQ=255)
ttGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCg > 2:2518757/1‑93 (MQ=255)
tGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGt > 2:1393257/1‑93 (MQ=255)
ttCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTcc < 2:582320/93‑1 (MQ=255)
ttCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTcc < 2:3924458/93‑1 (MQ=255)
ttCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGACAACCTGGCGTTcc > 1:2859819/1‑93 (MQ=255)
tCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCt > 1:520870/1‑93 (MQ=255)
tCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCt < 2:235145/93‑1 (MQ=255)
tCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCt < 2:284317/93‑1 (MQ=255)
tCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCt > 1:5914073/1‑93 (MQ=255)
tCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCt < 1:2534467/93‑1 (MQ=255)
cAGGTAACCCCGGACATTCTGATGCGTTTGTCTGCAGCGATGGCGCGTCGTCGGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTc < 1:4811826/93‑1 (MQ=255)
cAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTc < 2:3892779/93‑1 (MQ=255)
ggTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGa < 1:1096267/93‑1 (MQ=255)
ggTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGa < 2:1266682/93‑1 (MQ=255)
ggTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGa < 1:5420113/93‑1 (MQ=255)
ggTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGa < 1:3988898/93‑1 (MQ=255)
tAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACg > 1:142376/1‑93 (MQ=255)
aaaCCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGt > 1:1567808/1‑93 (MQ=255)
aaaCCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGt < 1:4495525/93‑1 (MQ=255)
aaaCCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGt < 2:5036712/93‑1 (MQ=255)
aaCCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTg > 1:3748770/1‑93 (MQ=255)
aCCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGa < 2:458299/93‑1 (MQ=255)
aCCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGa < 2:4654582/93‑1 (MQ=255)
aCCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGa < 1:2952764/93‑1 (MQ=255)
aCCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGa < 2:1848112/93‑1 (MQ=255)
cccGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGAc > 1:1945353/1‑93 (MQ=255)
cGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACgg < 2:4098942/93‑1 (MQ=255)
cGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACgg > 2:4197910/1‑93 (MQ=255)
ggACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACggg > 1:3619891/1‑93 (MQ=255)
gACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGc > 2:2103726/1‑93 (MQ=255)
gACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGc < 2:4708430/93‑1 (MQ=255)
gACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGc > 1:6287230/1‑93 (MQ=255)
gACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGc < 1:1054442/93‑1 (MQ=255)
gACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGc < 1:5754982/93‑1 (MQ=255)
aCATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGcc < 1:2191218/93‑1 (MQ=255)
aTTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGc > 1:3860144/1‑93 (MQ=255)
aTTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGc > 1:1542394/1‑93 (MQ=255)
ttCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCa > 2:736066/1‑93 (MQ=255)
aTGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGca > 2:3417334/1‑93 (MQ=255)
aTGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGca > 2:1448027/1‑93 (MQ=255)
aTGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGca < 2:1541905/93‑1 (MQ=255)
tGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGcac > 1:4251386/1‑93 (MQ=255)
tGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGcac < 2:2722150/93‑1 (MQ=255)
gCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGcaca > 1:4620313/1‑93 (MQ=255)
cGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAg > 1:2162199/1‑93 (MQ=255)
cGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAg < 1:277425/93‑1 (MQ=255)
gTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGa < 2:3095529/93‑1 (MQ=255)
gTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGa < 1:3465745/93‑1 (MQ=255)
tttGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGAc > 2:1005152/1‑93 (MQ=255)
tGTCTCCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGActc < 2:1311222/93‑1 (MQ=255)
ttGCACAGATGGCGCGTCGTCTGCAAGTCCCTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTctgc < 2:5952191/92‑1 (MQ=255)
tGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTctgct < 1:3122326/93‑1 (MQ=255)
acaGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGaa > 1:5542415/1‑93 (MQ=255)
agagGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATc < 2:3788136/93‑1 (MQ=255)
gATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCt < 1:577634/93‑1 (MQ=255)
aTGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTg > 1:480661/1‑93 (MQ=255)
aTGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTg < 2:6017951/93‑1 (MQ=255)
cgtcgtCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCaaaa < 1:2335602/93‑1 (MQ=255)
cgtcgtCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCaaaa < 2:2538148/93‑1 (MQ=255)
tcgtcTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAaaca > 1:128035/1‑93 (MQ=255)
cgtcTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAaacaa < 1:6003011/93‑1 (MQ=255)
cgtcTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAaacaa > 2:2044758/1‑93 (MQ=255)
gtcTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAaacaac < 2:3557847/93‑1 (MQ=255)
gtcTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAaacaac > 1:3645378/1‑93 (MQ=255)
gtcTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAaacaac > 2:6159653/1‑93 (MQ=255)
cTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCa < 1:6228366/93‑1 (MQ=255)
cTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCa > 1:4019870/1‑93 (MQ=255)
cTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCa < 1:4085466/93‑1 (MQ=255)
tGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAg > 1:1829998/1‑93 (MQ=255)
gCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGa < 2:2461905/93‑1 (MQ=255)
gCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGa < 1:5226071/93‑1 (MQ=255)
aGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACNAGACGc > 1:91295/1‑93 (MQ=255)
tCACTTCAGAGAAAGCGGGCAACCTGTCATTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTa < 2:913251/93‑1 (MQ=255)
tCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTa > 2:3697770/1‑93 (MQ=255)
tCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTa < 2:3281978/93‑1 (MQ=255)
tCACTTCAGAGAAAGCGGCCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTa < 2:3847536/93‑1 (MQ=255)
cACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTAt > 2:3539023/1‑93 (MQ=255)
ccTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATg < 2:5130837/92‑1 (MQ=255)
cTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGa > 2:1692883/1‑93 (MQ=255)
ttCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGAc > 2:542452/1‑93 (MQ=255)
ttCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGAc < 2:1260251/93‑1 (MQ=255)
tCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACt < 1:2284896/93‑1 (MQ=255)
agaAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAcc < 2:2304445/93‑1 (MQ=255)
aaaaGCGGCCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAccc < 2:4539886/92‑1 (MQ=255)
aaaGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCg > 2:321488/1‑93 (MQ=255)
|
AAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGG > NC_000913/3484059‑3484240
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACG > NC_000913/3484060‑3484243
|
AAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGG < SRR4302533.708076/94‑1 (MQ=60)
AAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGG < SRR4302533.6264964/94‑1 (MQ=60)
AATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGG < SRR4302533.2192298/94‑1 (MQ=60)
ATTTCGCCAATTGATTCAGGTAACCCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGC < SRR4302533.5250821/94‑1 (MQ=60)
ATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGC < SRR4302533.910554/94‑1 (MQ=60)
ATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGC < SRR4302533.5103946/94‑1 (MQ=60)
TTCGCTAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAA < SRR4302533.3777375/94‑1 (MQ=60)
CGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCCAGTCACTTCAGAGAAAGCGGGCAACC > SRR4302533.2391454/1‑94 (MQ=60)
CGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACC > SRR4302533.3788890/1‑94 (MQ=60)
GCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCT < SRR4302533.3287670/94‑1 (MQ=60)
CCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTG > SRR4302533.822841/1‑94 (MQ=60)
CAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGG < SRR4302533.1093757/94‑1 (MQ=60)
CAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGG > SRR4302533.5634110/1‑94 (MQ=60)
CAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGG > SRR4302533.5038717/1‑94 (MQ=60)
CAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGG < SRR4302533.3667708/94‑1 (MQ=60)
AATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGC > SRR4302533.4210633/1‑94 (MQ=60)
AATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGC > SRR4302533.4021202/1‑94 (MQ=60)
AATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGC < SRR4302533.3559320/94‑1 (MQ=60)
AATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGC > SRR4302533.2712401/1‑94 (MQ=60)
ATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCG < SRR4302533.2620113/94‑1 (MQ=60)
TTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGT < SRR4302533.1507141/94‑1 (MQ=60)
TTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGT > SRR4302533.5125458/1‑94 (MQ=60)
TGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTT > SRR4302533.2754930/1‑94 (MQ=60)
TGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTT > SRR4302533.5942573/1‑94 (MQ=60)
TATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTC < SRR4302533.2917491/94‑1 (MQ=60)
ATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCATTTCAGAGAAAGCGGGCAACCTGGCGTTCC > SRR4302533.4942145/1‑94 (MQ=60)
ATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGACAACCTGGCGTTCC > SRR4302533.2877413/1‑94 (MQ=60)
TTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCT < SRR4302533.5039973/94‑1 (MQ=60)
TTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCT > SRR4302533.523960/1‑94 (MQ=60)
TTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCT > SRR4302533.5949813/1‑94 (MQ=60)
TCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTC < SRR4302533.2550068/94‑1 (MQ=60)
CAGGTAACCCCGGACATTCTGATGCGTTTGTCTGCAGCGATGGCGCGTCGTCGGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCG < SRR4302533.4840988/94‑1 (MQ=60)
CAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCG > SRR4302533.4409563/1‑94 (MQ=60)
GGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGAC < SRR4302533.5452725/94‑1 (MQ=60)
GGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGAC < SRR4302533.1102758/94‑1 (MQ=60)
GGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGAC < SRR4302533.4013194/94‑1 (MQ=60)
GTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACG > SRR4302533.143285/1‑94 (MQ=60)
TAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGT > SRR4302533.456226/1‑94 (MQ=60)
TAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGT > SRR4302533.1577249/1‑94 (MQ=60)
AAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTG > SRR4302533.3771751/1‑94 (MQ=60)
AAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTG > SRR4302533.1540124/1‑94 (MQ=60)
AAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTG < SRR4302533.4522747/94‑1 (MQ=60)
AACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGA > SRR4302533.4099879/1‑94 (MQ=60)
ACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGAC > SRR4302533.6317149/1‑94 (MQ=60)
ACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGAC < SRR4302533.2970819/94‑1 (MQ=60)
ACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGAC < SRR4302533.6008084/94‑1 (MQ=60)
ACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGAC < SRR4302533.48314/94‑1 (MQ=60)
ACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGAC > SRR4302533.1957217/1‑94 (MQ=60)
CCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACG < SRR4302533.2774113/94‑1 (MQ=60)
CCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGG > SRR4302533.1574636/1‑94 (MQ=60)
CCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGG < SRR4302533.6002628/94‑1 (MQ=60)
CCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGG > SRR4302533.3732071/1‑94 (MQ=60)
CCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGG < SRR4302533.1863920/94‑1 (MQ=60)
CCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGG < SRR4302533.564842/94‑1 (MQ=60)
CGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGG < SRR4302533.127609/94‑1 (MQ=60)
CGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGG > SRR4302533.3642164/1‑94 (MQ=60)
GGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGC > SRR4302533.6324739/1‑94 (MQ=60)
GGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGC > SRR4302533.2335313/1‑94 (MQ=60)
GACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCC < SRR4302533.1060649/94‑1 (MQ=60)
GACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCC < SRR4302533.2441296/94‑1 (MQ=60)
GACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCC < SRR4302533.5789706/94‑1 (MQ=60)
ACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCG < SRR4302533.2204719/94‑1 (MQ=60)
CATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGC > SRR4302533.3579771/1‑94 (MQ=60)
CATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGC > SRR4302533.3980843/1‑94 (MQ=60)
CATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGC > SRR4302533.1551684/1‑94 (MQ=60)
CATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGC > SRR4302533.3883710/1‑94 (MQ=60)
ATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCA > SRR4302533.895161/1‑94 (MQ=60)
ATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCA > SRR4302533.140390/1‑94 (MQ=60)
TTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCAT < SRR4302533.5062587/94‑1 (MQ=60)
TGCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCAT < SRR4302533.3782807/94‑1 (MQ=60)
CTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTG > SRR4302533.3743539/1‑94 (MQ=60)
CTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTG > SRR4302533.3466308/1‑94 (MQ=60)
TGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGC < SRR4302533.1278500/94‑1 (MQ=60)
ATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCAC > SRR4302533.4277033/1‑94 (MQ=60)
ATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCAC > SRR4302533.4050344/1‑94 (MQ=60)
ATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCAC > SRR4302533.3973191/1‑94 (MQ=60)
TGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACA > SRR4302533.4648313/1‑94 (MQ=60)
TGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACA > SRR4302533.4383557/1‑94 (MQ=60)
TGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACA < SRR4302533.3253092/94‑1 (MQ=60)
GCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAG > SRR4302533.2175505/1‑94 (MQ=60)
CGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGA < SRR4302533.279119/94‑1 (MQ=60)
CGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGA > SRR4302533.3525416/1‑94 (MQ=60)
GTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGAC > SRR4302533.4739367/1‑94 (MQ=60)
GTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGAC < SRR4302533.3487136/94‑1 (MQ=60)
TTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTC > SRR4302533.944049/1‑94 (MQ=60)
TGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCT < SRR4302533.3836245/94‑1 (MQ=60)
GTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTG < SRR4302533.3461400/94‑1 (MQ=60)
GTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCAGCATTGCACAGACTCTG > SRR4302533.2348770/1‑94 (MQ=60)
CTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCT < SRR4302533.2213934/94‑1 (MQ=60)
TGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTG > SRR4302533.4043642/1‑94 (MQ=60)
TGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTG < SRR4302533.5837168/94‑1 (MQ=60)
TGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTG < SRR4302533.3141521/94‑1 (MQ=60)
CACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAA > SRR4302533.5575889/1‑94 (MQ=60)
CAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATC > SRR4302533.345892/1‑94 (MQ=60)
CAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATC < SRR4302533.3255516/94‑1 (MQ=60)
CAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGCCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATC < SRR4302533.1302347/94‑1 (MQ=60)
AGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCT < SRR4302533.2799302/94‑1 (MQ=60)
GATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTG < SRR4302533.581039/94‑1 (MQ=60)
GATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTG > SRR4302533.483534/1‑94 (MQ=60)
GGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCA < SRR4302533.4592325/94‑1 (MQ=60)
GCGCGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAA < SRR4302533.1629616/94‑1 (MQ=60)
CGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAAC > SRR4302533.4837827/1‑94 (MQ=60)
CGTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAAC < SRR4302533.2350059/94‑1 (MQ=60)
GTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACA > SRR4302533.2071013/1‑94 (MQ=60)
GTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACA < SRR4302533.752394/94‑1 (MQ=60)
GTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACA < SRR4302533.2698777/94‑1 (MQ=60)
GTCGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACA > SRR4302533.128836/1‑94 (MQ=60)
CGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAAC > SRR4302533.1623665/1‑94 (MQ=60)
CGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAAC < SRR4302533.6039386/94‑1 (MQ=60)
CGTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAAC > SRR4302533.3667790/1‑94 (MQ=60)
GTCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACC > SRR4302533.2098666/1‑94 (MQ=60)
TCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCA > SRR4302533.4044348/1‑94 (MQ=60)
TCTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCA > SRR4302533.2286057/1‑94 (MQ=60)
CTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAG < SRR4302533.4110336/94‑1 (MQ=60)
CTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAG > SRR4302533.1841170/1‑94 (MQ=60)
CTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAG < SRR4302533.6265677/94‑1 (MQ=60)
CTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAG > SRR4302533.6092406/1‑94 (MQ=60)
CTGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAG < SRR4302533.5795865/94‑1 (MQ=60)
TGCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGA > SRR4302533.547775/1‑94 (MQ=60)
GCAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGAC < SRR4302533.5257519/94‑1 (MQ=60)
CAAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACG > SRR4302533.5451823/1‑94 (MQ=60)
AAGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACNAGACGC > SRR4302533.91874/1‑94 (MQ=60)
AGTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACCACCAGACGCT > SRR4302533.2692596/1‑94 (MQ=60)
GTCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTA < SRR4302533.2825865/94‑1 (MQ=60)
TCTCTTCAGAGAAAGCGGGCAGCCTGGCGTTCCTCTACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTAT < SRR4302533.5162677/94‑1 (MQ=60)
TCACTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTAT < SRR4302533.3637074/94‑1 (MQ=60)
CTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGAC > SRR4302533.817534/1‑94 (MQ=60)
CTTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGAC > SRR4302533.3109884/1‑94 (MQ=60)
TTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACT < SRR4302533.6224890/94‑1 (MQ=60)
TTCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACT < SRR4302533.5522724/94‑1 (MQ=60)
TCAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTC < SRR4302533.2299038/94‑1 (MQ=60)
CAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCA > SRR4302533.4872274/1‑94 (MQ=60)
CAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCA < SRR4302533.2561843/94‑1 (MQ=60)
CAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCA < SRR4302533.1872182/94‑1 (MQ=60)
CAGAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCA > SRR4302533.3651243/1‑94 (MQ=60)
GAGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACC < SRR4302533.5375336/94‑1 (MQ=60)
AGAAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCC < SRR4302533.94293/94‑1 (MQ=60)
AAAGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGG > SRR4302533.3012683/1‑94 (MQ=60)
AGCGGGCAACCTGGGGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGAC < SRR4302533.3402821/94‑1 (MQ=60)
AGCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGAC < SRR4302533.749627/94‑1 (MQ=60)
GCGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACG < SRR4302533.229110/94‑1 (MQ=60)
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AAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACG > NC_000913/3484060‑3484243
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
