Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,850,058 |
G→A |
G118G (GGC→GGT) |
ilvB ← |
acetolactate synthase I large subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,850,058 | 0 | G | A | 99.6%
| 905.4
/ NA
| 249 | G118G (GGC→GGT) | ilvB | acetolactate synthase I large subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (142/106); minor base T (0/1); total (142/107) |
| Fisher's exact test for biased strand distribution p-value = 4.30e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 262 total aligned reads displayed.
CGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGT > NC_000913/3849968‑3850147
|
cGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTAcc > 2:2184444/1‑93 (MQ=255)
gggAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCg > 1:1049402/1‑93 (MQ=255)
gggAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCg > 2:1976509/1‑93 (MQ=255)
ggAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGa > 1:1227410/1‑93 (MQ=255)
ggAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGa > 2:455893/1‑93 (MQ=255)
ggAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGa > 1:1857009/1‑93 (MQ=255)
ggAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGa > 2:180884/1‑93 (MQ=255)
gAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGat > 1:1607972/1‑93 (MQ=255)
gAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGat > 2:5494422/1‑93 (MQ=255)
ttcttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCTACTTCCTGGAAGGCGTCGGTACCGatcat > 2:2275696/1‑93 (MQ=255)
ttcttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatcat < 2:2440701/93‑1 (MQ=255)
tcttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatcatc > 1:3551412/1‑93 (MQ=255)
tcttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatcatc > 2:3143286/1‑93 (MQ=255)
tcttcGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGatcatc > 2:5808924/1‑93 (MQ=255)
cGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGCATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAgg < 1:914337/93‑1 (MQ=255)
gATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGc > 1:5848899/1‑93 (MQ=255)
atatGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCg < 2:1722447/93‑1 (MQ=255)
atatGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCg > 1:4545525/1‑93 (MQ=255)
tatGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCgg > 1:2257440/1‑93 (MQ=255)
tatGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCgg > 2:3328365/1‑93 (MQ=255)
tatGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCgg < 2:414041/93‑1 (MQ=255)
tatGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCgg < 1:4610288/93‑1 (MQ=255)
atGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGCGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCTAGGCggg > 1:5987217/1‑93 (MQ=255)
atGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCggg > 2:1194967/1‑93 (MQ=255)
atGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCggg > 2:45130/1‑93 (MQ=255)
atGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCggg > 2:5331596/1‑93 (MQ=255)
tGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGa > 1:4361627/1‑93 (MQ=255)
tCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAAc > 2:1421967/1‑93 (MQ=255)
cTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAAcc < 2:1674708/93‑1 (MQ=255)
cTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGGAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGCAcc > 1:1785077/1‑93 (MQ=255)
gACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTg < 2:3365921/93‑1 (MQ=255)
gACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTg < 1:4059197/93‑1 (MQ=255)
aCCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGa < 1:5033331/93‑1 (MQ=255)
ccAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAc < 2:5715047/93‑1 (MQ=255)
ctgATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAcc > 2:3971854/3‑93 (MQ=255)
cAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAcc > 1:5423778/1‑93 (MQ=255)
aGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCa < 1:328528/93‑1 (MQ=255)
aGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCa > 1:2193256/1‑93 (MQ=255)
aTAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAgg > 2:582804/1‑92 (MQ=255)
tAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTg < 1:3043834/93‑1 (MQ=255)
tAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTg > 1:5293094/1‑93 (MQ=255)
tAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTg > 2:4672580/1‑93 (MQ=255)
gTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGAt < 1:3815265/93‑1 (MQ=255)
tgtgTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGc < 2:4267215/93‑1 (MQ=255)
tgtgTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGc > 2:5287018/1‑93 (MQ=255)
tgtTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCaa > 1:37049/1‑93 (MQ=255)
ttGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATc < 2:92989/93‑1 (MQ=255)
ttGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATc < 1:4174318/93‑1 (MQ=255)
ggTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAg > 1:3212508/1‑93 (MQ=255)
gTGATGGGGATAGAGATGCCGTAGGTGTCCCCTTCCTGGAATGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGc < 1:466895/93‑1 (MQ=255)
gATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGCACCTGACCAGTGATGCAAATCAGCgg > 2:3166734/1‑93 (MQ=255)
aTGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCggg > 1:2584797/1‑93 (MQ=255)
tGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGa < 1:3151033/93‑1 (MQ=255)
tGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGa < 2:1062064/93‑1 (MQ=255)
ggggATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAt < 1:803598/93‑1 (MQ=255)
ggggATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAt < 2:5065345/93‑1 (MQ=255)
gggATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATg > 2:2853991/1‑93 (MQ=255)
gggATAGAGATGCCGTAGGGGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGGCCAGGGATGCAAATCAGCGGGATg > 2:1572787/1‑93 (MQ=255)
gATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGa < 1:6283151/93‑1 (MQ=255)
gATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGa < 1:5071432/93‑1 (MQ=255)
gATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGa < 2:2963519/93‑1 (MQ=255)
tAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGt > 2:4610173/1‑93 (MQ=255)
tAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGt < 1:64944/93‑1 (MQ=255)
tAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGt < 1:242682/93‑1 (MQ=255)
gagaTGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTcc > 2:3867735/1‑93 (MQ=255)
agaTGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCa < 1:2044822/93‑1 (MQ=255)
ccGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCcgc < 1:1260779/93‑1 (MQ=255)
ccGTAGGTGCCCACTGCCGGGAAGGCGTCGGTACCGATCATCGAGGCGGGACCCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCcgc < 2:5392920/93‑1 (MQ=255)
gTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCgcgc > 2:5627345/1‑93 (MQ=255)
tAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGTCCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCa < 1:4651649/93‑1 (MQ=255)
tAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCa < 2:701883/93‑1 (MQ=255)
tAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCa < 2:2112893/93‑1 (MQ=255)
tAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGCGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCa > 2:4018594/1‑93 (MQ=255)
gtCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGc > 2:6037122/1‑93 (MQ=255)
gtCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGc > 2:4801439/1‑93 (MQ=255)
tCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCCGCa > 2:4946160/1‑93 (MQ=255)
ccACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCaa < 2:4111909/93‑1 (MQ=255)
ccACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCaa < 2:4995955/93‑1 (MQ=255)
ccACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCaa < 1:5254486/93‑1 (MQ=255)
cTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATgg > 1:274283/1‑93 (MQ=255)
ccTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCgg < 2:3434408/93‑1 (MQ=255)
ccTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCgg > 1:2977429/1‑93 (MQ=255)
cTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGt > 2:1563470/1‑93 (MQ=255)
cTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGt > 1:1455326/1‑93 (MQ=255)
cTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGt > 2:2653737/1‑93 (MQ=255)
tGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTc > 1:490759/1‑93 (MQ=255)
tGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAAAGGCGGTc > 1:112684/1‑93 (MQ=255)
tGGAAGGCATCGGTACCGATCGTCGAGGCGATAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGGGCATCGGCAATGGCGGtt < 2:4088821/93‑2 (MQ=255)
ggAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCa > 1:1689659/1‑93 (MQ=255)
gAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCAc > 1:6136681/1‑93 (MQ=255)
gAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCAc > 1:2388855/1‑93 (MQ=255)
aaGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCAcc < 2:797488/93‑1 (MQ=255)
aGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCa > 2:4731940/1‑93 (MQ=255)
aGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCa < 2:4415504/93‑1 (MQ=255)
ggCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGGATCGGCAATGGCGGTGCCCAg > 2:5183470/1‑93 (MQ=255)
cGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGt < 1:3505025/93‑1 (MQ=255)
tCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAgggtc > 2:3547715/1‑90 (MQ=255)
tCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTa < 1:973502/93‑1 (MQ=255)
ggTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGt < 1:1923813/93‑1 (MQ=255)
ggTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGGTAGt > 2:3735403/1‑93 (MQ=255)
|
CGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGT > NC_000913/3849968‑3850147
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTCGCA > NC_000913/3849965‑3850151
|
CTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTA > SRR4302533.3525688/1‑94 (MQ=60)
GCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACC < SRR4302533.1667371/94‑1 (MQ=60)
CGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCG > SRR4302533.1055570/1‑94 (MQ=60)
GGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGA > SRR4302533.1868336/1‑94 (MQ=60)
GGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGA > SRR4302533.1234760/1‑94 (MQ=60)
GGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGA > SRR4302533.69493/1‑94 (MQ=60)
GGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGA > SRR4302533.3780982/1‑94 (MQ=60)
GGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGAT > SRR4302533.1617728/1‑94 (MQ=60)
GGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGAT > SRR4302533.3058035/1‑94 (MQ=60)
AGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCA > SRR4302533.5310322/1‑94 (MQ=60)
AGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCA > SRR4302533.4854643/1‑94 (MQ=60)
ATTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCAT < SRR4302533.685798/94‑1 (MQ=60)
TTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATC > SRR4302533.3573290/1‑94 (MQ=60)
TTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATC > SRR4302533.464224/1‑94 (MQ=60)
TTCTTCGATATGTCTGACAAGATAGTTGTGTTTGGTTATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATC < SRR4302533.1822964/94‑1 (MQ=60)
TCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCG < SRR4302533.4617995/94‑1 (MQ=60)
TGCGATAGGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAG < SRR4302533.5058398/94‑1 (MQ=60)
CGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGC > SRR4302533.5448883/1‑94 (MQ=60)
CGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGC > SRR4302533.5884260/1‑94 (MQ=60)
CGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGC > SRR4302533.3218416/1‑94 (MQ=60)
CGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGCATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGC < SRR4302533.919713/94‑1 (MQ=60)
CGACATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGC < SRR4302533.897244/94‑1 (MQ=60)
GATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCG > SRR4302533.4573054/1‑94 (MQ=60)
GATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCG < SRR4302533.1894506/94‑1 (MQ=60)
ATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGG > SRR4302533.2271407/1‑94 (MQ=60)
TATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGCGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCTAGGCGGG > SRR4302533.6023475/1‑94 (MQ=60)
TATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGG < SRR4302533.4638209/94‑1 (MQ=60)
TATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGG > SRR4302533.6023476/1‑94 (MQ=60)
ATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGA > SRR4302533.3507141/1‑94 (MQ=60)
ATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGA > SRR4302533.4387954/1‑94 (MQ=60)
GTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAAC > SRR4302533.4676414/1‑94 (MQ=60)
TCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGGAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGCACC > SRR4302533.1795933/1‑94 (MQ=60)
GACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGA < SRR4302533.4083906/94‑1 (MQ=60)
gcaagatattgttcgtgGGTGATGGGGTTAGAGCTGACTTAGGTGTCCCCTTCCTGGAAGCCGTCGGTACCGATAATCGAGGCGGGAACCTGAC < SRR4302533.2915882/77‑1 (MQ=33)
ACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAC < SRR4302533.5063820/94‑1 (MQ=60)
ACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGAC > SRR4302533.2203802/1‑94 (MQ=60)
CCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACC > SRR4302533.5456443/1‑94 (MQ=60)
CCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACC > SRR4302533.1142706/1‑94 (MQ=60)
CAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCA > SRR4302533.2206770/1‑94 (MQ=60)
CAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCA < SRR4302533.1332778/94‑1 (MQ=60)
CAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCA > SRR4302533.3730863/1‑94 (MQ=60)
CAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCA > SRR4302533.1766214/1‑94 (MQ=60)
AGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAG > SRR4302533.5354719/1‑94 (MQ=60)
AGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAG < SRR4302533.330533/94‑1 (MQ=60)
ATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTG > SRR4302533.5324780/1‑94 (MQ=60)
ATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTAGGTACCGATCATCGAGGCGGGAACCTGACCAGTG < SRR4302533.1591022/94‑1 (MQ=60)
TAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGA < SRR4302533.3062466/94‑1 (MQ=60)
AGTTGTGTTTGGTGATGGGGATAGAGATGCTGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGAT > SRR4302533.4968774/1‑94 (MQ=60)
GTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATG < SRR4302533.3838595/94‑1 (MQ=60)
GTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATG < SRR4302533.1266069/94‑1 (MQ=60)
TTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGC > SRR4302533.1696211/1‑94 (MQ=60)
GTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAA > SRR4302533.37294/1‑94 (MQ=60)
GTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAA > SRR4302533.5268881/1‑94 (MQ=60)
TGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAA > SRR4302533.2526933/1‑94 (MQ=60)
TTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATC < SRR4302533.436363/94‑1 (MQ=60)
TTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCA < SRR4302533.4199613/94‑1 (MQ=60)
TGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAG > SRR4302533.3232294/1‑94 (MQ=60)
TGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAG < SRR4302533.6193201/94‑1 (MQ=60)
GTGATGGGGATAGAGATGCCGTAGGTGTCCCCTTCCTGGAATGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCG < SRR4302533.469683/94‑1 (MQ=60)
GTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCG > SRR4302533.3290660/1‑94 (MQ=60)
GTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCG > SRR4302533.2260712/1‑94 (MQ=60)
GATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGG > SRR4302533.109298/1‑94 (MQ=60)
GATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGG < SRR4302533.4531082/94‑1 (MQ=60)
GATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGG > SRR4302533.2600689/1‑94 (MQ=60)
ATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGA > SRR4302533.4376079/1‑94 (MQ=60)
ATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGA > SRR4302533.2386085/1‑94 (MQ=60)
TGGGGATAGAGATGCCGTAGGTGTCCCCTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAT < SRR4302533.934427/94‑1 (MQ=60)
TGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAT < SRR4302533.3170407/94‑1 (MQ=60)
TGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAT < SRR4302533.4191871/94‑1 (MQ=60)
TGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAT < SRR4302533.949584/94‑1 (MQ=60)
TGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAT < SRR4302533.1281707/94‑1 (MQ=60)
TGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGAT > SRR4302533.3096282/1‑94 (MQ=60)
GGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATG > SRR4302533.2588363/1‑94 (MQ=60)
GGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATG < SRR4302533.808318/94‑1 (MQ=60)
GATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAG < SRR4302533.5102086/94‑1 (MQ=60)
GATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAG < SRR4302533.6320646/94‑1 (MQ=60)
GATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGACGGAG < SRR4302533.2222799/94‑1 (MQ=60)
TAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTC < SRR4302533.4042459/94‑1 (MQ=60)
TAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTC < SRR4302533.244186/94‑1 (MQ=60)
TAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTC < SRR4302533.65364/94‑1 (MQ=60)
AGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAG < SRR4302533.2057427/94‑1 (MQ=60)
CCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCG < SRR4302533.1268319/94‑1 (MQ=60)
TAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGTCCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCAT < SRR4302533.4679835/94‑1 (MQ=60)
TAGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCAT > SRR4302533.5621584/1‑94 (MQ=60)
AGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATC < SRR4302533.3541069/94‑1 (MQ=60)
AGGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATC > SRR4302533.6067678/1‑94 (MQ=60)
GGTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCCCATCG > SRR4302533.156854/1‑94 (MQ=60)
GTGTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGG > SRR4302533.2352061/1‑94 (MQ=60)
GTCCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCCGCCGCGCATCGGCA > SRR4302533.1942568/1‑94 (MQ=60)
CCACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAAT < SRR4302533.5286052/94‑1 (MQ=60)
CACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATG > SRR4302533.1757840/1‑94 (MQ=60)
CACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATG > SRR4302533.3185698/1‑94 (MQ=60)
CACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATG < SRR4302533.3591281/94‑1 (MQ=60)
ACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGG < SRR4302533.1971969/94‑1 (MQ=60)
ACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGG > SRR4302533.275952/1‑94 (MQ=60)
ACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGG < SRR4302533.2905009/94‑1 (MQ=60)
ACTTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGAAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGG < SRR4302533.5484077/94‑1 (MQ=60)
TTCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCCATGGCG > SRR4302533.3277146/1‑94 (MQ=60)
TCCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGG > SRR4302533.2995645/1‑94 (MQ=60)
CCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGT > SRR4302533.1464099/1‑94 (MQ=60)
CCTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGT < SRR4302533.2602478/94‑1 (MQ=60)
CTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTC > SRR4302533.493693/1‑94 (MQ=60)
CTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTC < SRR4302533.2416464/94‑1 (MQ=60)
CTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTC < SRR4302533.590025/94‑1 (MQ=60)
CTGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAAAGGCGGTC > SRR4302533.113397/1‑94 (MQ=60)
TGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCA < SRR4302533.5207296/94‑1 (MQ=60)
TGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCA > SRR4302533.1699894/1‑94 (MQ=60)
TGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCA < SRR4302533.4819674/94‑1 (MQ=60)
TGGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCA > SRR4302533.4581562/1‑94 (MQ=60)
GGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCAC > SRR4302533.2403610/1‑94 (MQ=60)
GGAAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCAC > SRR4302533.6173652/1‑94 (MQ=60)
AAGGCGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCCGGATGGAGTCCAGCCGCGCATCGGCAATGGAGGTCACCA > SRR4302533.64907/1‑94 (MQ=60)
GCGTCGGTACCGATCATCGAGGCGGGGACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGT < SRR4302533.1935370/94‑1 (MQ=60)
CGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCCCCAGGgg > SRR4302533.84735/1‑92 (MQ=60)
CGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTT < SRR4302533.3526634/94‑1 (MQ=60)
CGTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTT < SRR4302533.3526633/94‑1 (MQ=60)
GTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTA < SRR4302533.4680890/94‑1 (MQ=60)
GTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTA > SRR4302533.3000654/1‑94 (MQ=60)
GTCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTA > SRR4302533.1139311/1‑94 (MQ=60)
TCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAG < SRR4302533.979218/94‑1 (MQ=60)
TCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAG < SRR4302533.6207923/94‑1 (MQ=60)
TCGGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAG < SRR4302533.4060036/94‑1 (MQ=60)
GGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTC < SRR4302533.1935550/94‑1 (MQ=60)
GGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTC < SRR4302533.2806386/94‑1 (MQ=60)
GGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTC < SRR4302533.5070950/94‑1 (MQ=60)
GGTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTC > SRR4302533.4977403/1‑94 (MQ=60)
GTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTCG > SRR4302533.259158/1‑94 (MQ=60)
GTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTCG < SRR4302533.5280106/94‑1 (MQ=60)
GTACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTCG < SRR4302533.32343/94‑1 (MQ=60)
TACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGGGGTCACCAGGTTAGTCGC > SRR4302533.5187813/1‑94 (MQ=60)
TACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTCGC > SRR4302533.3375878/1‑94 (MQ=60)
ACCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTCGCA < SRR4302533.3393435/94‑1 (MQ=60)
|
CTGCGGGAGTTCTTCGATATGTCTGACCAGATAGTTGTGTTTGGTGATGGGGATAGAGATGCCGTAGGTGTCCACTTCCTGGAAGGCGTCGGTGCCGATCATCGAGGCGGGAACCTGACCAGTGATGCAAATCAGCGGGATGGAGTCCAGCCGCGCATCGGCAATGGCGGTCACCAGGTTAGTCGCA > NC_000913/3849965‑3850151
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
